BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036287
(488 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/488 (74%), Positives = 427/488 (87%), Gaps = 14/488 (2%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGRE+H QVLKLGL SNRS R+KL+ELYGKCG F+DA ++FDEMPE DVVASTVMIN Y
Sbjct: 148 EGREVHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPE-RDVVASTVMINYY 206
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+HG +KDTVCWTAMIDGLVRNGE RAL++FR MQR++V PNEVTIV
Sbjct: 207 FDHG-------------IKDTVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIV 253
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
CVLSACS+LGAL+LGRW+ SYM KHRI+LNH VGGALINMYSRCGDID+A +VFE+MKE+
Sbjct: 254 CVLSACSELGALQLGRWVRSYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEK 313
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+V TYNS+I G A+HG+S+EAVE+FR +I QG P+ VTFVGVLNACSHGGL +LGFEIF
Sbjct: 314 NVITYNSMIMGFALHGKSVEAVELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIF 373
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM +DYGIEPQIEHYGC+VDLL R+GR EEAY FI MK+APDH+MLG+LLSACKIHG
Sbjct: 374 HSMAKDYGIEPQIEHYGCMVDLLGRLGRLEEAYSFIRMMKVAPDHVMLGALLSACKIHGN 433
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
L+L E++AK L+ C++ADSGTY+LLSNAY+SSGKWKEA ++R M+E G++KEPGCSSIE
Sbjct: 434 LELAERVAKSLVACKNADSGTYILLSNAYSSSGKWKEAAEVRTNMREEGIEKEPGCSSIE 493
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
VNNEIHEF+LGD+RHPQ+E+IYKK++EL QI++LEGY+P+TEVVLHDIE EKEWALAIH
Sbjct: 494 VNNEIHEFLLGDLRHPQKEKIYKKLEELNQILRLEGYTPATEVVLHDIEKSEKEWALAIH 553
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLAICYGLISTKP TT+RVVKNLRVCNDCH IKLI+NIT+RKI+VRDRNRFHHFENG
Sbjct: 554 SERLAICYGLISTKPLTTLRVVKNLRVCNDCHLTIKLISNITRRKIVVRDRNRFHHFENG 613
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 614 VCSCGDYW 621
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 150/307 (48%), Gaps = 26/307 (8%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A ++FS + + +TA+IDGLV + + L+ +M ++ P+ + VL AC
Sbjct: 83 ASKIFSHTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSVLKACGC 142
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT---- 184
AL+ GR +HS + K + N + LI +Y +CG + A +VF+EM ERDV
Sbjct: 143 HLALKEGREVHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVVASTVM 202
Query: 185 --------------YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
+ ++I GL +G S A+E+FR M + + P +VT V VL+ACS
Sbjct: 203 INYYFDHGIKDTVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSACSEL 262
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHY--GCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
G + LG + M + ++ H+ G ++++ SR G +EA MK + I
Sbjct: 263 GALQLGRWVRSYMDKH---RIELNHFVGGALINMYSRCGDIDEAQRVFEQMK-EKNVITY 318
Query: 289 GSLLSACKIHGKLQLGEQIAKRLL-DCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM-K 346
S++ +HGK ++ + L+ + S T+V + NA + G + +I M K
Sbjct: 319 NSMIMGFALHGKSVEAVELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAK 378
Query: 347 EAGVQKE 353
+ G++ +
Sbjct: 379 DYGIEPQ 385
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 97/248 (39%), Gaps = 56/248 (22%)
Query: 157 LINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPT 216
L+ + S I A ++F + +V Y +LI GL + + + ++ +MIN + P
Sbjct: 70 LLRVCSNLNSIGYASKIFSHTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPD 129
Query: 217 KVTFVGVLNACS-----------HGGLVDLG--------------------FE----IFQ 241
VL AC H ++ LG FE +F
Sbjct: 130 SYAVTSVLKACGCHLALKEGREVHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFD 189
Query: 242 SMTR--------------DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPD 284
M D+GI+ + + ++D L R G A + NM+ + P+
Sbjct: 190 EMPERDVVASTVMINYYFDHGIKDTV-CWTAMIDGLVRNGESNRALEVFRNMQREDVMPN 248
Query: 285 HIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV--LLSNAYASSGKWKEAVQIR 342
+ + +LSAC G LQLG + + +D + +V L N Y+ G EA ++
Sbjct: 249 EVTIVCVLSACSELGALQLGRWV-RSYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVF 307
Query: 343 AKMKEAGV 350
+MKE V
Sbjct: 308 EQMKEKNV 315
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 751 bits (1939), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/488 (73%), Positives = 420/488 (86%), Gaps = 2/488 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGRE+H + LKLGL SNR RL+++ELYGKCGE DA ++F+EMPE DVVASTVMI+ Y
Sbjct: 165 EGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPE--DVVASTVMISSY 222
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ GLVE A VFSRV+ KDTVCWTAMIDG VRN EM RAL+ FR MQ +NVRPNE TIV
Sbjct: 223 SDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIV 282
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
CVLSACSQLGALE+GRW+HSYM K I+LN VG ALINMYSRCG ID+A VF+EMK+R
Sbjct: 283 CVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDR 342
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV TYN++I+GL+M+G+S +A+E+FR MI + +RPT VTFVGVLNACSHGGLVD GF+IF
Sbjct: 343 DVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIF 402
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SMTRDYG+EPQIEHYGC+VDLL RVGR EEAYD I MK+ PDHIMLG+LLSACK+H
Sbjct: 403 HSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKN 462
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
L+LGEQ+AK L D ADSGTYVLLS+ YASSGKWKEA Q+RAKMKEAG+QKEPGCSSIE
Sbjct: 463 LELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIE 522
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
VNNEIHEF+LGD+RHP++E+IY+K++EL ++++LEGY P EVVL DIED EKEWALAIH
Sbjct: 523 VNNEIHEFLLGDLRHPRKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAIH 582
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLAICYGLIST+P T IRV+KNLRVC DCHS IKLIA IT+RK++VRDRNRFH+FENG
Sbjct: 583 SERLAICYGLISTEPCTVIRVMKNLRVCYDCHSAIKLIAKITRRKVVVRDRNRFHYFENG 642
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 643 ACSCGDYW 650
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 156/354 (44%), Gaps = 47/354 (13%)
Query: 32 GEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGL 91
G +D +F+ + C+ A ++ A +F + +TA+IDG
Sbjct: 76 GHSQDPFMVFELLRSCSKCHA-------------IDYASRIFQYTHNPNVYLYTALIDGF 122
Query: 92 VRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH 151
V +G A+ L+ M D++ P+ + +L AC AL GR +HS K + N
Sbjct: 123 VSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNR 182
Query: 152 IVGGALINMYSRCGDIDKALQVFEEMKE------------------------------RD 181
+V ++ +Y +CG++ A +VFEEM E +D
Sbjct: 183 LVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKD 242
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++I G + A+E FR M + +RP + T V VL+ACS G +++G +
Sbjct: 243 TVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWV-H 301
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
S R + IE + ++++ SR G +EA MK D I +++S ++GK
Sbjct: 302 SYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMK-DRDVITYNTMISGLSMNGKS 360
Query: 302 QLGEQIAKRLLDCRSADSG-TYVLLSNAYASSGKWKEAVQIRAKM-KEAGVQKE 353
+ ++ + ++ R + T+V + NA + G +I M ++ GV+ +
Sbjct: 361 RQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQ 414
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/488 (73%), Positives = 416/488 (85%), Gaps = 2/488 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGRE+H + LKLG SNR RL+++ELYGKCGE DA ++F+EMPE DVVASTVMI+ Y
Sbjct: 165 EGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPE--DVVASTVMISSY 222
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ GLVE A VFSRV+ KDTVCWTAMIDG VRN E RAL+ FR MQ +NVRPNE TIV
Sbjct: 223 SDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIV 282
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
CVLSACSQLGALE+GRW+HSYM K I+LN VG ALINMYSRCG ID+A VF+EMK+R
Sbjct: 283 CVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDR 342
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV TYN++I+GL+M+G+S +A+E+FR M+ + +RPT VTFVGVLNACSHGGLVD GFEIF
Sbjct: 343 DVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIF 402
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM RDY +EPQIEHYGC+VDLL RVGR EEAYD I MK+ PDHIMLG+LLSACK+H
Sbjct: 403 HSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKN 462
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
L+LGEQ+AK L D ADSGTYVLLS+ YASSGKWKEA Q+RAKMKEAG+QKEPGCSSIE
Sbjct: 463 LELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIE 522
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
VNNEIHEF+LGD+RHPQ+E+IY+K++EL ++++LEGY P EVVL DIED EKEWALA+H
Sbjct: 523 VNNEIHEFLLGDLRHPQKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAMH 582
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLAICYGLIST+P T IRV+KNLRVC DCHS IKLIA IT+RKI+VRDRNRFH+FENG
Sbjct: 583 SERLAICYGLISTEPCTMIRVMKNLRVCYDCHSAIKLIAKITRRKIVVRDRNRFHYFENG 642
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 643 ACSCGDYW 650
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 147/333 (44%), Gaps = 46/333 (13%)
Query: 32 GEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGL 91
G +D +F+ + C+ A ++ A +F + +TA+IDG
Sbjct: 76 GHSQDPFMVFELLRSCSKCHA-------------IDYASRIFQYTHNPNVYLYTALIDGF 122
Query: 92 VRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH 151
V +G A+ L+ M +++ P+ + +L AC AL GR +HS K N
Sbjct: 123 VSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNR 182
Query: 152 IVGGALINMYSRCGDIDKALQVFEEMKE------------------------------RD 181
+V ++ +Y +CG++ A +VFEEM E +D
Sbjct: 183 LVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKD 242
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++I G + + A+E FR M + +RP + T V VL+ACS G +++G +
Sbjct: 243 TVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWV-H 301
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
S R + IE + ++++ SR G +EA MK D I +++S ++GK
Sbjct: 302 SYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMK-DRDVITYNTMISGLSMNGKS 360
Query: 302 QLGEQIAKRLLDCRSADSG-TYVLLSNAYASSG 333
+ ++ + ++ R + T+V + NA + G
Sbjct: 361 RQAIELFRVMVGRRLRPTNVTFVGVLNACSHGG 393
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/488 (70%), Positives = 401/488 (82%), Gaps = 28/488 (5%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGRE+H + LKLGL SNR RL+++ELYGKCGE DA ++F+EMPE DVVA
Sbjct: 148 EGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPE--DVVA-------- 197
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
KDTVCWTAMIDG VRN EM RAL+ FR MQ +NVRPNE TIV
Sbjct: 198 ------------------KDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIV 239
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
CVLSACSQLGALE+GRW+HSYM K I+LN VG ALINMYSRCG ID+A VF+EMK+R
Sbjct: 240 CVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDR 299
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV TYN++I+GL+M+G+S +A+E+FR MI + +RPT VTFVGVLNACSHGGLVD GF+IF
Sbjct: 300 DVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIF 359
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SMTRDYG+EPQIEHYGC+VDLL RVGR EEAYD I MK+ PDHIMLG+LLSACK+H
Sbjct: 360 HSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKN 419
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
L+LGEQ+AK L D ADSGTYVLLS+ YASSGKWKEA Q+RAKMKEAG+QKEPGCSSIE
Sbjct: 420 LELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIE 479
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
VNNEIHEF+LGD+RHP++E+IY+K++EL ++++LEGY P EVVL DIED EKEWALAIH
Sbjct: 480 VNNEIHEFLLGDLRHPRKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAIH 539
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLAICYGLIST+P T IRV+KNLRVC DCHS IKLIA IT+RK++VRDRNRFH+FENG
Sbjct: 540 SERLAICYGLISTEPCTVIRVMKNLRVCYDCHSAIKLIAKITRRKVVVRDRNRFHYFENG 599
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 600 ACSCGDYW 607
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 156/328 (47%), Gaps = 21/328 (6%)
Query: 32 GEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGL 91
G +D +F+ + C+ A ++ A +F + +TA+IDG
Sbjct: 59 GHSQDPFMVFELLRSCSKCHA-------------IDYASRIFQYTHNPNVYLYTALIDGF 105
Query: 92 VRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH 151
V +G A+ L+ M D++ P+ + +L AC AL GR +HS K + N
Sbjct: 106 VSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNR 165
Query: 152 IVGGALINMYSRCGDIDKALQVFEEMKE----RDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
+V ++ +Y +CG++ A +VFEEM E +D + ++I G + A+E FR
Sbjct: 166 LVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEAFRG 225
Query: 208 MINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
M + +RP + T V VL+ACS G +++G + S R + IE + ++++ SR G
Sbjct: 226 MQGENVRPNEFTIVCVLSACSQLGALEIGRWV-HSYMRKFEIELNLFVGNALINMYSRCG 284
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG-TYVLLS 326
+EA MK D I +++S ++GK + ++ + ++ R + T+V +
Sbjct: 285 SIDEAQTVFDEMK-DRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVL 343
Query: 327 NAYASSGKWKEAVQIRAKM-KEAGVQKE 353
NA + G +I M ++ GV+ +
Sbjct: 344 NACSHGGLVDFGFKIFHSMTRDYGVEPQ 371
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/488 (70%), Positives = 397/488 (81%), Gaps = 28/488 (5%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGRE+H + LKLG SNR RL+++ELYGKCGE DA ++F+EMPE DVVA
Sbjct: 155 EGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPE--DVVA-------- 204
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
KDTVCWTAMIDG VRN E RAL+ FR MQ +NVRPNE TIV
Sbjct: 205 ------------------KDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIV 246
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
CVLSACSQLGALE+GRW+HSYM K I+LN VG ALINMYSRCG ID+A VF+EMK+R
Sbjct: 247 CVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDR 306
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV TYN++I+GL+M+G+S +A+E+FR M+ + +RPT VTFVGVLNACSHGGLVD GFEIF
Sbjct: 307 DVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIF 366
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM RDY +EPQIEHYGC+VDLL RVGR EEAYD I MK+ PDHIMLG+LLSACK+H
Sbjct: 367 HSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKN 426
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
L+LGEQ+AK L D ADSGTYVLLS+ YASSGKWKEA Q+RAKMKEAG+QKEPGCSSIE
Sbjct: 427 LELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIE 486
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
VNNEIHEF+LGD+RHPQ+E+IY+K++EL ++++LEGY P EVVL DIED EKEWALA+H
Sbjct: 487 VNNEIHEFLLGDLRHPQKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAMH 546
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLAICYGLIST+P T IRV+KNLRVC DCHS IKLIA IT+RKI+VRDRNRFH+FENG
Sbjct: 547 SERLAICYGLISTEPCTMIRVMKNLRVCYDCHSAIKLIAKITRRKIVVRDRNRFHYFENG 606
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 607 ACSCGDYW 614
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 147/307 (47%), Gaps = 20/307 (6%)
Query: 32 GEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGL 91
G +D +F+ + C+ A ++ A +F + +TA+IDG
Sbjct: 66 GHSQDPFMVFELLRSCSKCHA-------------IDYASRIFQYTHNPNVYLYTALIDGF 112
Query: 92 VRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH 151
V +G A+ L+ M +++ P+ + +L AC AL GR +HS K N
Sbjct: 113 VSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNR 172
Query: 152 IVGGALINMYSRCGDIDKALQVFEEMKE----RDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
+V ++ +Y +CG++ A +VFEEM E +D + ++I G + + A+E FR
Sbjct: 173 LVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRG 232
Query: 208 MINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
M + +RP + T V VL+ACS G +++G + S R + IE + ++++ SR G
Sbjct: 233 MQGENVRPNEFTIVCVLSACSQLGALEIGRWV-HSYMRKFEIELNLFVGNALINMYSRCG 291
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG-TYVLLS 326
+EA MK D I +++S ++GK + ++ + ++ R + T+V +
Sbjct: 292 SIDEAQTVFDEMK-DRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVL 350
Query: 327 NAYASSG 333
NA + G
Sbjct: 351 NACSHGG 357
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/487 (64%), Positives = 392/487 (80%), Gaps = 1/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+E+HG VLK GL +RS LKLVELYGKCG +DA ++FD MPE DVVA TVMI
Sbjct: 144 GKEVHGLVLKSGLGLDRSIALKLVELYGKCGVLEDARKMFDGMPE-RDVVACTVMIGSCF 202
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G+VE A EVF+ + +DTVCWT +IDGLVRNGE R L++FREMQ V PNEVT VC
Sbjct: 203 DCGMVEEAIEVFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVC 262
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLSAC+QLGALELGRWIH+YM K +++N V GALINMYSRCGDID+A +F+ ++ +D
Sbjct: 263 VLSACAQLGALELGRWIHAYMRKCGVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVKD 322
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V+TYNS+I GLA+HG+SIEAVE+F EM+ + +RP +TFVGVLNACSHGGLVDLG EIF+
Sbjct: 323 VSTYNSMIGGLALHGKSIEAVELFSEMLKERVRPNGITFVGVLNACSHGGLVDLGGEIFE 382
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM +GIEP++EHYGC+VD+L RVGR EEA+DFI M + D ML SLLSACKIH +
Sbjct: 383 SMEMIHGIEPEVEHYGCMVDILGRVGRLEEAFDFIGRMGVEADDKMLCSLLSACKIHKNI 442
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+GE++AK L + DSG++++LSN YAS G+W A ++R KM++ G+ KEPGCSSIEV
Sbjct: 443 GMGEKVAKLLSEHYRIDSGSFIMLSNFYASLGRWSYAAEVREKMEKGGIIKEPGCSSIEV 502
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
NN IHEF GD+RHP+R++IYKK++EL + K EGY P+TEV LHDI+D +KE ALA+HS
Sbjct: 503 NNAIHEFFSGDLRHPERKRIYKKLEELNYLTKFEGYLPATEVALHDIDDEQKELALAVHS 562
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ERLAICYGL+ST+ YTT+RV KNLR+C+DCH+MIKLIA IT+RKI+VRDRNRFHHFENG
Sbjct: 563 ERLAICYGLVSTEAYTTLRVGKNLRICDDCHAMIKLIAKITRRKIVVRDRNRFHHFENGE 622
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 623 CSCKDYW 629
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 148/317 (46%), Gaps = 34/317 (10%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D + ++ Y + +++A ++F + + +T++IDG V G A++LF +M
Sbjct: 58 DPFVAFELLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGFVSFGSYTDAINLFCQMV 117
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD-- 166
R +V + + +L AC AL G+ +H + K + L+ + L+ +Y +CG
Sbjct: 118 RKHVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSIALKLVELYGKCGVLE 177
Query: 167 -----------------------------IDKALQVFEEMKERDVTTYNSLIAGLAMHGR 197
+++A++VF EM RD + +I GL +G
Sbjct: 178 DARKMFDGMPERDVVACTVMIGSCFDCGMVEEAIEVFNEMGTRDTVCWTMVIDGLVRNGE 237
Query: 198 SIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYG 257
+E+FREM +G+ P +VTFV VL+AC+ G ++LG I M R G+E G
Sbjct: 238 FNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALELGRWIHAYM-RKCGVEVNRFVAG 296
Query: 258 CIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSA 317
++++ SR G +EA +++ D S++ +HGK ++ +L R
Sbjct: 297 ALINMYSRCGDIDEAQALFDGVRV-KDVSTYNSMIGGLALHGKSIEAVELFSEMLKERVR 355
Query: 318 DSG-TYVLLSNAYASSG 333
+G T+V + NA + G
Sbjct: 356 PNGITFVGVLNACSHGG 372
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 254/487 (52%), Positives = 355/487 (72%), Gaps = 1/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H Q +KLG S+ R L+++Y + G+ A QLFD MPE +V+ T M+ CY
Sbjct: 143 GKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE-KSLVSLTAMLTCYA 201
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+HG ++ A +F ++ +D VCW MIDG +NG AL LFR M + +PNEVT++
Sbjct: 202 KHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLS 261
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLSAC QLGALE GRW+HSY+ + I N VG AL++MYS+CG ++ A VF+++ ++D
Sbjct: 262 VLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKD 321
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +NS+I G AMHG S EA+++F+ M G+ PT +TF+G+L+AC H G V G++IF
Sbjct: 322 VVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFN 381
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M +YGIEP+IEHYGC+V+LL R G E+AY+ + NM I PD ++ G+LL AC++HGK+
Sbjct: 382 KMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKI 441
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
LGE+I + L+D A+SGTY+LLSN YA+ G W ++R MK++GV+KEPGCSSIEV
Sbjct: 442 ALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEV 501
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
NN++HEF+ G + HP+R++IY ++E+ +K GY+P T++VLHDI + EKE +L +HS
Sbjct: 502 NNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHS 561
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GLI+T+P TTI++VKNLRVC DCH + KLI+ IT RKI+VRDRNRFHHF NG+
Sbjct: 562 EKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGS 621
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 622 CSCGDYW 628
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 146/332 (43%), Gaps = 49/332 (14%)
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
Y G ++ + +F R + WTA+I G G +AL+ + +M V PN T
Sbjct: 72 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 131
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE--- 176
+L C +E G+ +HS K D + V L+++Y+R GD+ A Q+F+
Sbjct: 132 SSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 187
Query: 177 ----------------------------MKERDVTTYNSLIAGLAMHGRSIEAVEMFREM 208
M+ERD +N +I G +G EA+ +FR M
Sbjct: 188 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 247
Query: 209 INQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGR 268
+ +P +VT + VL+AC G ++ G + S + GI+ + +VD+ S+ G
Sbjct: 248 LKAKAKPNEVTVLSVLSACGQLGALESGRWV-HSYIENNGIQFNVHVGTALVDMYSKCGS 306
Query: 269 PEEA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR---SADSGTY 322
E+A +D I + D + S++ +HG Q Q+ K + CR + T+
Sbjct: 307 LEDARLVFDKIDD----KDVVAWNSMIVGYAMHGFSQEALQLFKSM--CRMGLHPTNITF 360
Query: 323 VLLSNAYASSGKWKEAVQIRAKMK-EAGVQKE 353
+ + +A SG E I KMK E G++ +
Sbjct: 361 IGILSACGHSGWVTEGWDIFNKMKDEYGIEPK 392
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 253/487 (51%), Positives = 354/487 (72%), Gaps = 1/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H Q +KLG S+ R L+++Y + G+ A QLFD MPE +V+ T M+ CY
Sbjct: 90 GKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE-KSLVSLTAMLTCYA 148
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+HG ++ A +F ++ +D VCW MIDG +NG AL LFR M + +PNEVT++
Sbjct: 149 KHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLS 208
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLSAC QLGALE GRW+HSY+ + I N VG AL++MYS+CG ++ A VF+++ ++D
Sbjct: 209 VLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKD 268
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +NS+I G AM G S EA+++F+ M G+ PT +TF+G+L+AC H G V G++IF
Sbjct: 269 VVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFN 328
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M +YGIEP+IEHYGC+V+LL R G E+AY+ + NM I PD ++ G+LL AC++HGK+
Sbjct: 329 KMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKI 388
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
LGE+I + L+D A+SGTY+LLSN YA+ G W ++R MK++GV+KEPGCSSIEV
Sbjct: 389 ALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEV 448
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
NN++HEF+ G + HP+R++IY ++E+ +K GY+P T++VLHDI + EKE +L +HS
Sbjct: 449 NNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHS 508
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GLI+T+P TTI++VKNLRVC DCH + KLI+ IT RKI+VRDRNRFHHF NG+
Sbjct: 509 EKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGS 568
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 569 CSCGDYW 575
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 145/332 (43%), Gaps = 49/332 (14%)
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
Y G ++ + +F R + WTA+I G G +AL+ + +M V PN T
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE--- 176
+L C +E G+ +HS K D + V L+++Y+R GD+ A Q+F+
Sbjct: 79 SSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 134
Query: 177 ----------------------------MKERDVTTYNSLIAGLAMHGRSIEAVEMFREM 208
M+ERD +N +I G +G EA+ +FR M
Sbjct: 135 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 194
Query: 209 INQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGR 268
+ +P +VT + VL+AC G ++ G + S + GI+ + +VD+ S+ G
Sbjct: 195 LKAKAKPNEVTVLSVLSACGQLGALESGRWV-HSYIENNGIQFNVHVGTALVDMYSKCGS 253
Query: 269 PEEA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR---SADSGTY 322
E+A +D I + D + S++ + G Q Q+ K + CR + T+
Sbjct: 254 LEDARLVFDKIDD----KDVVAWNSMIVGYAMXGFSQEALQLFKSM--CRMGLHPTNITF 307
Query: 323 VLLSNAYASSGKWKEAVQIRAKMK-EAGVQKE 353
+ + +A SG E I KMK E G++ +
Sbjct: 308 IGILSACGHSGWVTEGWDIFNKMKDEYGIEPK 339
>gi|334188487|ref|NP_200728.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170817|sp|Q9FIF7.1|PP435_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic; Flags: Precursor
gi|9759241|dbj|BAB09765.1| unnamed protein product [Arabidopsis thaliana]
gi|332009773|gb|AED97156.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 544
Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust.
Identities = 253/393 (64%), Positives = 325/393 (82%), Gaps = 1/393 (0%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
REIH QVLKLG S+RS LK++E+YGK GE +A ++FDEMP+ D VA+TVMINCY E
Sbjct: 143 REIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPD-RDHVAATVMINCYSE 201
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
G ++ A E+F VK+KDTVCWTAMIDGLVRN EM +AL+LFREMQ +NV NE T VCV
Sbjct: 202 CGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCV 261
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
LSACS LGALELGRW+HS++ R++L++ VG ALINMYSRCGDI++A +VF M+++DV
Sbjct: 262 LSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDV 321
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
+YN++I+GLAMHG S+EA+ FR+M+N+G RP +VT V +LNACSHGGL+D+G E+F S
Sbjct: 322 ISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNS 381
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
M R + +EPQIEHYGCIVDLL RVGR EEAY FI N+ I PDHIMLG+LLSACKIHG ++
Sbjct: 382 MKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNME 441
Query: 303 LGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVN 362
LGE+IAKRL + + DSGTYVLLSN YASSGKWKE+ +IR M+++G++KEPGCS+IEV+
Sbjct: 442 LGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVD 501
Query: 363 NEIHEFILGDIRHPQREQIYKKMQELKQIVKLE 395
N+IHEF++GDI HP +E IY+++QEL +I++ +
Sbjct: 502 NQIHEFLVGDIAHPHKEAIYQRLQELNRILRFK 534
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 124/265 (46%), Gaps = 37/265 (13%)
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
V+ A++VFS V + +TAMIDG V +G A + L+ M ++V P+ I VL A
Sbjct: 77 VDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKA 136
Query: 126 CSQLGALELGRWIHSY-------------------------------MGKHRIDLNHIVG 154
C L++ R IH+ M D +H+
Sbjct: 137 CD----LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAA 192
Query: 155 GALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIR 214
+IN YS CG I +AL++F+++K +D + ++I GL + +A+E+FREM + +
Sbjct: 193 TVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVS 252
Query: 215 PTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYD 274
+ T V VL+ACS G ++LG + S + +E ++++ SR G EA
Sbjct: 253 ANEFTAVCVLSACSDLGALELGRWV-HSFVENQRMELSNFVGNALINMYSRCGDINEARR 311
Query: 275 FITNMKIAPDHIMLGSLLSACKIHG 299
M+ D I +++S +HG
Sbjct: 312 VFRVMR-DKDVISYNTMISGLAMHG 335
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 113/253 (44%), Gaps = 36/253 (14%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H V + + L+ +Y +CG+ +A ++F M +
Sbjct: 274 GRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRD--------------- 318
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
KD + + MI GL +G A++ FR+M RPN+VT+V
Sbjct: 319 -----------------KDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVA 361
Query: 122 VLSACSQLGALELGRWIHSYMGK-HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
+L+ACS G L++G + + M + ++ G ++++ R G +++A + E + E
Sbjct: 362 LLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIE 421
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
D +L++ +HG ++E E + + + P T+V + N + G EI
Sbjct: 422 PDHIMLGTLLSACKIHG-NMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEI 480
Query: 240 FQSMTRDYGIEPQ 252
+SM RD GIE +
Sbjct: 481 RESM-RDSGIEKE 492
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 15/147 (10%)
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T++ VL +C + + IH+ + + D + V LI + S +D A VF +
Sbjct: 31 TLISVLRSCKNIAHVP---SIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 87
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-------HG 230
+V Y ++I G GRS + V ++ MI+ + P VL AC H
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHA 147
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYG 257
++ LGF +R G++ +E YG
Sbjct: 148 QVLKLGF----GSSRSVGLK-MMEIYG 169
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust.
Identities = 252/487 (51%), Positives = 353/487 (72%), Gaps = 1/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H Q +KLGL S+ R LV++Y + G+ A QLFD+MPE +V+ T M+ CY
Sbjct: 160 GKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPE-RSLVSLTTMLTCYS 218
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G ++ A +F +K +D VCW MI G ++G +L LFR M PNEVT++
Sbjct: 219 KMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLA 278
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLSAC QLGALE GRWIHSY+ I +N VG ALI+MYS+CG ++ A VF+ ++++D
Sbjct: 279 VLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKD 338
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +NS+I G AMHG S A+++F EM G +PT +TF+G+L+AC HGGLV+ G F+
Sbjct: 339 VVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFR 398
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M YGIEP+IEHYGC+V+LL R G EEAY + NM IA D ++ G+LL C++H +
Sbjct: 399 LMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNI 458
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LGE+IAK L+D + A+SGTYVLLSN YA++G W+ ++R MKE G++KE GCSSIEV
Sbjct: 459 KLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEV 518
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+N++HEF+ G+ +HP+ ++IY + E+ +K GY+P T+VVLHD+ + +KE +L +HS
Sbjct: 519 DNKVHEFVAGERKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLHDLREEQKEQSLEVHS 578
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GLISTKP TT+++VKNLRVC+DCH+++K+I+ IT RKI++RDRNRFHHFE+G
Sbjct: 579 EKLAIAFGLISTKPGTTVKIVKNLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGL 638
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 639 CSCGDYW 645
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust.
Identities = 244/457 (53%), Positives = 337/457 (73%), Gaps = 1/457 (0%)
Query: 32 GEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGL 91
G+ A QLFD MPE +V+ T M+ CY +HG ++ A +F ++ +D VCW MIDG
Sbjct: 107 GDVVSAQQLFDTMPE-KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGY 165
Query: 92 VRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH 151
+NG AL LFR M + +PNEVT++ VLSAC QLGALE GRW+HSY+ + I N
Sbjct: 166 TQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNV 225
Query: 152 IVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ 211
VG AL++MYS+CG ++ A VF+++ ++DV +NS+I G AMHG S EA+++F+ M
Sbjct: 226 HVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRM 285
Query: 212 GIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEE 271
G+ PT +TF+G+L+AC H G V G++IF M +YGIEP+IEHYGC+V+LL R G E+
Sbjct: 286 GLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQ 345
Query: 272 AYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYAS 331
AY+ + NM I PD ++ G+LL AC++HGK+ LGE+I + L+D A+SGTY+LLSN YA+
Sbjct: 346 AYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAA 405
Query: 332 SGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQI 391
G W ++R MK++GV+KEPGCSSIEVNN++HEF+ G + HP+R++IY ++E+
Sbjct: 406 VGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGW 465
Query: 392 VKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDC 451
+K GY+P T++VLHDI + EKE +L +HSE+LAI +GLI+T+P TTI++VKNLRVC DC
Sbjct: 466 LKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADC 525
Query: 452 HSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
H + KLI+ IT RKI+VRDRNRFHHF NG+CSCGDYW
Sbjct: 526 HEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 562
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 116/254 (45%), Gaps = 36/254 (14%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
GR +H + G++ N LV++Y KCG +DA +FD++ + DVVA MI Y
Sbjct: 208 SGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDD-KDVVAWNSMIVGY 266
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG FS+ AL LF+ M R + P +T +
Sbjct: 267 AMHG--------FSQ-----------------------EALQLFKSMCRMGLHPTNITFI 295
Query: 121 CVLSACSQLGALELGRWIHSYM-GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
+LSAC G + G I + M ++ I+ G ++N+ R G +++A ++ + M
Sbjct: 296 GILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNI 355
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
E D + +L+ +HG+ ++ +++Q + + T++ + N + G D G
Sbjct: 356 EPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSG-TYILLSNIYAAVGNWD-GVA 413
Query: 239 IFQSMTRDYGIEPQ 252
++M +D G++ +
Sbjct: 414 RLRTMMKDSGVKKE 427
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 244/488 (50%), Positives = 345/488 (70%), Gaps = 2/488 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H KL L + L+ +Y + G+ A LFDEMP+ + VV T M+ CY
Sbjct: 149 GRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPH-VVPVTAMLTCYA 207
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G +++A E+F + KD +CW AMIDG ++G AL LFR M R V P+EV I+
Sbjct: 208 KMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIIL 267
Query: 122 VLSACSQLGALELGRWIHSYM-GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
LSA +QLG E GRW+HSY+ R+ LN VG ALI+MY +CG ++ A+ VF + ++
Sbjct: 268 ALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDK 327
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D+ +N++I G AMHG S +A+EMF ++ +QG+ PT +TF+G+LNACSH GLVD G + F
Sbjct: 328 DIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFF 387
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
QSM +Y I P+IEHYGC+VDLL R G EEA+ + +M IAPD +M SLL+AC++H
Sbjct: 388 QSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKN 447
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+ LG+QIA L+ A+SG Y+LLSN YA+ G W+E ++R+ MK +G+QKEPGCS+IE
Sbjct: 448 MALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIE 507
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
V +++EF+ GD+ HP+ ++IY ++++ IVK +G+ P TE+VLHD+++ KE ALA+H
Sbjct: 508 VGRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQTELVLHDLDEVTKEKALAVH 567
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LA+ +GLIST P TI++VKNLR C DCH+++KLI+ IT RKI+ RDRNRFHHF +G
Sbjct: 568 SEKLAVAFGLISTAPGETIKIVKNLRACADCHAVLKLISKITGRKIVFRDRNRFHHFVDG 627
Query: 481 TCSCGDYW 488
+C+CGDYW
Sbjct: 628 SCTCGDYW 635
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 126/302 (41%), Gaps = 42/302 (13%)
Query: 81 TVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHS 140
TV +T+ I G AL L EM + P T+ L AC L LGR +H+
Sbjct: 98 TVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSSLPACH---GLALGRALHA 154
Query: 141 YMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE--------------------- 179
Y K + + V AL+ MY+R GD D A +F+EM +
Sbjct: 155 YAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDD 214
Query: 180 ----------RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH 229
+D +N++I G HGR EA+ +FR M+ G+ P +V + L+A +
Sbjct: 215 ARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQ 274
Query: 230 GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLG 289
G + G + + ++ ++D+ + G E+A ++ D ++
Sbjct: 275 LGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIG-DKDIVVWN 333
Query: 290 SLLSACKIHG----KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
++++ +HG L++ Q+ + L T++ L NA + SG E Q M
Sbjct: 334 AMINGYAMHGDSRKALEMFSQLRSQGL---WPTDITFIGLLNACSHSGLVDEGHQFFQSM 390
Query: 346 KE 347
+E
Sbjct: 391 EE 392
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 244/488 (50%), Positives = 345/488 (70%), Gaps = 2/488 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H KL L + L+ +Y + G+ A LFDEMP+ + VV T M+ CY
Sbjct: 148 GRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPH-VVPVTAMLTCYA 206
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G +++A E+F + KD +CW AMIDG ++G AL LFR M R V P+EV I+
Sbjct: 207 KMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIIL 266
Query: 122 VLSACSQLGALELGRWIHSYM-GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
LSA +QLG E GRW+HSY+ R+ LN VG ALI+MY +CG ++ A+ VF + ++
Sbjct: 267 ALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDK 326
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D+ +N++I G AMHG S +A+EMF ++ +QG+ PT +TF+G+LNACSH GLVD G + F
Sbjct: 327 DIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFF 386
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
QSM +Y I P+IEHYGC+VDLL R G EEA+ + +M IAPD +M SLL+AC++H
Sbjct: 387 QSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKN 446
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+ LG+QIA L+ A+SG Y+LLSN YA+ G W+E ++R+ MK +G+QKEPGCS+IE
Sbjct: 447 MALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIE 506
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
V +++EF+ GD+ HP+ ++IY ++++ IVK +G+ P TE+VLHD+++ KE ALA+H
Sbjct: 507 VGRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQTELVLHDLDEVTKEKALAVH 566
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LA+ +GLIST P TI++VKNLR C DCH+++KLI+ IT RKI+ RDRNRFHHF +G
Sbjct: 567 SEKLAVAFGLISTAPGETIKIVKNLRACADCHAVLKLISKITGRKIVFRDRNRFHHFVDG 626
Query: 481 TCSCGDYW 488
+C+CGDYW
Sbjct: 627 SCTCGDYW 634
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 126/302 (41%), Gaps = 42/302 (13%)
Query: 81 TVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHS 140
TV +T+ I G AL L EM + P T+ L AC L LGR +H+
Sbjct: 97 TVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSSLPACH---GLALGRALHA 153
Query: 141 YMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE--------------------- 179
Y K + + V AL+ MY+R GD D A +F+EM +
Sbjct: 154 YAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDD 213
Query: 180 ----------RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH 229
+D +N++I G HGR EA+ +FR M+ G+ P +V + L+A +
Sbjct: 214 ARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQ 273
Query: 230 GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLG 289
G + G + + ++ ++D+ + G E+A ++ D ++
Sbjct: 274 LGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIG-DKDIVVWN 332
Query: 290 SLLSACKIHG----KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
++++ +HG L++ Q+ + L T++ L NA + SG E Q M
Sbjct: 333 AMINGYAMHGDSRKALEMFSQLRSQGL---WPTDITFIGLLNACSHSGLVDEGHQFFQSM 389
Query: 346 KE 347
+E
Sbjct: 390 EE 391
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 239/445 (53%), Positives = 333/445 (74%), Gaps = 1/445 (0%)
Query: 44 MPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDL 103
MPE +V+ T MI CY ++G+++ A +F ++ +D +CW MIDG ++G L L
Sbjct: 1 MPE-KSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLL 59
Query: 104 FREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSR 163
FR+M VRPNEVT++ VLSAC Q GALE GRW+HSY+ + I +N VG +LI+MYS+
Sbjct: 60 FRQMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSK 119
Query: 164 CGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGV 223
CG ++ A VFE + +DV +NS++ G AMHG S +A+ +F+EM G +PT +TF+GV
Sbjct: 120 CGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGV 179
Query: 224 LNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAP 283
LNACSH GLV G++ F SM +YGIEP++EHYGC+V+LL R G EEAY+ + NM+I
Sbjct: 180 LNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQ 239
Query: 284 DHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRA 343
D ++ G+LL AC++HG + LGEQIA+ L+ A+SGTYVLLSN YA++G W+ ++R
Sbjct: 240 DPVLWGTLLGACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRT 299
Query: 344 KMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEV 403
MKE+G +KEPGCSSIEVNN++HEF+ GD+RHP+ +IY+ ++E+ +K GY+P T++
Sbjct: 300 LMKESGFEKEPGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEINGWLKTHGYTPQTDI 359
Query: 404 VLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITK 463
VLHD+ED +KE +L +HSE+LA+ +GLI+TKP TTI++VKNLRVC DCH++ KLI+ IT
Sbjct: 360 VLHDLEDAQKERSLGVHSEKLALAFGLITTKPGTTIKIVKNLRVCADCHAVTKLISKITG 419
Query: 464 RKIIVRDRNRFHHFENGTCSCGDYW 488
RK+++RDRNRFHHF NG CSCGDYW
Sbjct: 420 RKVVMRDRNRFHHFVNGLCSCGDYW 444
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 115/253 (45%), Gaps = 36/253 (14%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H + G+ N L+++Y KCG +DA +F+ + DVVA M+ Y
Sbjct: 91 GRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLVFERISN-KDVVAWNSMVVGYA 149
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG ++ AL LF+EM +P ++T +
Sbjct: 150 MHGFSQD-------------------------------ALRLFKEMCMIGYQPTDITFIG 178
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VL+ACS G + G ++ +S ++ I+ G ++N+ R G +++A ++ + M+ +
Sbjct: 179 VLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEID 238
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+D + +L+ +HG ++ +++Q + + T+V + N + G + G
Sbjct: 239 QDPVLWGTLLGACRLHGNIALGEQIAEYLVSQNLANSG-TYVLLSNIYAAAGNWE-GVAR 296
Query: 240 FQSMTRDYGIEPQ 252
+++ ++ G E +
Sbjct: 297 VRTLMKESGFEKE 309
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 243/488 (49%), Positives = 345/488 (70%), Gaps = 1/488 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +HG KL L + L+ +Y + G+ A LFD+M VV+ T M+ CY
Sbjct: 405 GRALHGYAFKLALAGDSYVATALLGMYARAGDATAARALFDDMLPDPHVVSVTAMLTCYA 464
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G +++A +F + KD VCW AMIDG ++G AL LFR M V P+EVT+V
Sbjct: 465 DMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDEVTVVL 524
Query: 122 VLSACSQLGALELGRWIHSYM-GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSA +QLG +E G+W+HSY+ R+ L+ VG ALI+MY +CG + A+ VF + ++
Sbjct: 525 VLSAVAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGIGDK 584
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D+ +N++I G AMHG S +A+EMF + QG+ PT +TF+G+LNACSH G+V+ G E F
Sbjct: 585 DIVVWNAMINGYAMHGDSRKALEMFVQSREQGLWPTDITFIGLLNACSHSGMVEEGREFF 644
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
QSM R+YGI+P+IEHYGC+VDLL R G +EA+ + +MKI PD +M SLL+AC++H
Sbjct: 645 QSMEREYGIDPKIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDAVMWVSLLAACRLHKN 704
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+ LG+QIA L+ A+SG Y+LLSN YA+ G W E ++R+ MK +G+QKEPGCSSIE
Sbjct: 705 MSLGQQIADYLVAKGLANSGMYILLSNIYAAVGNWGEVARVRSMMKASGIQKEPGCSSIE 764
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
++ E++EF+ GD+ HP+ ++IY + ++ +VK G+ P TE+VLHD+++ KE ALA+H
Sbjct: 765 IDREVYEFVAGDMSHPRTDEIYVMLDKMNGLVKEHGHVPQTELVLHDLDEATKEKALAVH 824
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LA+ +GLIST+P TI++VKNLR C+DCH+++KLI+ IT RKI+ RDRNRFHHF +G
Sbjct: 825 SEKLALAFGLISTQPGATIKIVKNLRACSDCHAVLKLISRITGRKIVFRDRNRFHHFVDG 884
Query: 481 TCSCGDYW 488
+CSCGDYW
Sbjct: 885 SCSCGDYW 892
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 125/314 (39%), Gaps = 41/314 (13%)
Query: 23 KLVELYGKCGEFKDAMQLFDE-----MPECNDVVASTVMINCYVEHGLVENAFEVFSRVK 77
+ V L C + A +L + + D + + Y G ++ + + R +
Sbjct: 291 RAVSLLTSCSTARRAAELHAAVLRTGLLDATDRAVAFRLQRAYAASGRLDLSLALLRRTR 350
Query: 78 VKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRW 137
+ +T+ I G AL L +M + P T+ L AC L GR
Sbjct: 351 DPTAIFYTSAIHAHSSRGHRLPALALLSDMLAQGLLPTAHTLSASLPACRGLSP---GRA 407
Query: 138 IHSYMGKHRIDLNHIVGGALINMYSRCGD------------------------------- 166
+H Y K + + V AL+ MY+R GD
Sbjct: 408 LHGYAFKLALAGDSYVATALLGMYARAGDATAARALFDDMLPDPHVVSVTAMLTCYADMG 467
Query: 167 -IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
+D A +F+ + +D +N++I G HGR EA+ +FR M+ G+ P +VT V VL+
Sbjct: 468 ALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLS 527
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDH 285
A + G V+ G + + ++ + ++D+ + G +A D + D
Sbjct: 528 AVAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGIG-DKDI 586
Query: 286 IMLGSLLSACKIHG 299
++ ++++ +HG
Sbjct: 587 VVWNAMINGYAMHG 600
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 245/494 (49%), Positives = 344/494 (69%), Gaps = 7/494 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +HG +KL L L+ +Y + GE A LFD M VV+ T M++CY
Sbjct: 140 GRALHGYAVKLALSGEPYVATALLGMYARAGEAAAARALFDGMRPDPHVVSVTAMLSCYA 199
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G +++A +F + KD VCW AM+DG ++G + AL LFR+M R V P+EV++V
Sbjct: 200 KMGQLDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLRSGVEPDEVSVVL 259
Query: 122 VLSACSQLGALELGRWIHSYMG----KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
LSA +QLG E GRW+HS++ + R+ LN VG AL++MY +CG +++A+ VF ++
Sbjct: 260 ALSAVAQLGTAESGRWLHSFVANGGRRARVRLNARVGTALVDMYYKCGSLEEAVAVFRDL 319
Query: 178 K---ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
+RDV +N++I G AMHGRS EA+E F ++ QG+ PT +TF+GVLNACSH GLVD
Sbjct: 320 GGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPTDITFIGVLNACSHSGLVD 379
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
G +F +M +YGI P++EHYGC+VDLL R GR EEA+D + +MK PD M SLL A
Sbjct: 380 EGRALFAAMEEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLVQSMKAKPDAAMWASLLGA 439
Query: 295 CKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
C++H L LG+++A L+ A+SGTYVLLSN YA++GKW+E ++R+ M+ +GVQKEP
Sbjct: 440 CRLHKNLALGQRVADYLVGNGLANSGTYVLLSNMYAAAGKWREVGRVRSMMRASGVQKEP 499
Query: 355 GCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKE 414
GCS++EV + EF+ GD HP+ +IY K++E+ I + G+ P TE+VLHD++D KE
Sbjct: 500 GCSAVEVGRRVVEFVAGDRSHPRSAEIYAKLEEVNSIARARGHVPHTELVLHDLDDAAKE 559
Query: 415 WALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRF 474
ALA+HSE+LA+ +GLIST P T I++VKNLR C DCH+++KL++ T RKI+ RDRNRF
Sbjct: 560 RALAVHSEKLALAFGLISTPPRTGIKIVKNLRACADCHAVLKLVSEATGRKIVFRDRNRF 619
Query: 475 HHFENGTCSCGDYW 488
HHF +G+CSCGDYW
Sbjct: 620 HHFVDGSCSCGDYW 633
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 134/334 (40%), Gaps = 53/334 (15%)
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM--QRDNVRPNE 116
Y G ++ A + R V +T+ I G AL L EM R + P
Sbjct: 65 AYAASGRLDLAVALLRRTPDPTAVFYTSAIHAHSSRGLHRAALALLSEMLLSRHGLLPTA 124
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMY--------------- 161
T+ L AC G L +GR +H Y K + V AL+ MY
Sbjct: 125 HTLSASLPAC---GCLAVGRALHGYAVKLALSGEPYVATALLGMYARAGEAAAARALFDG 181
Query: 162 -----------------SRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEM 204
++ G +D A +F+ + +D+ +N+++ G HGR EA+ +
Sbjct: 182 MRPDPHVVSVTAMLSCYAKMGQLDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRL 241
Query: 205 FREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYG----CIV 260
FR+M+ G+ P +V+ V L+A + G + G S + G ++ +V
Sbjct: 242 FRQMLRSGVEPDEVSVVLALSAVAQLGTAESG-RWLHSFVANGGRRARVRLNARVGTALV 300
Query: 261 DLLSRVGRPEEAYDFITNMKIAPDH--IMLGSLLSACKIHGKLQ-----LGEQIAKRLLD 313
D+ + G EEA ++ D + ++++ +HG+ + G+ A+ L
Sbjct: 301 DMYYKCGSLEEAVAVFRDLGGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWP 360
Query: 314 CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
T++ + NA + SG E + A M+E
Sbjct: 361 TDI----TFIGVLNACSHSGLVDEGRALFAAMEE 390
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 236/488 (48%), Positives = 348/488 (71%), Gaps = 2/488 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H KL L + L+ +Y + G+ A LFDEMP+ + VV+ T M+ CY
Sbjct: 138 GRALHAYAFKLALSGDSYVATALLSMYARAGDAAAARALFDEMPDPH-VVSVTAMLTCYA 196
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G +++A +F + KD +CW AMIDG ++G+ AL LFR M R + P+EVT+V
Sbjct: 197 NMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVL 256
Query: 122 VLSACSQLGALELGRWIHSYMGKHR-IDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSA +QLG +E G+W+HSY+ R + LN V AL++MY +CG ++ A+ VF + +
Sbjct: 257 VLSAVAQLGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGNK 316
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D+ +N++I G AMHG S +A+EMF ++ +QG+ PT +TF+G+LNACSH GLV+ G F
Sbjct: 317 DIVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSFF 376
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
QSM +YGI+P+IEHYGC+VDLL R G EEA+ + ++ I PD +M SLL+AC++H
Sbjct: 377 QSMEHEYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLAACRLHKN 436
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+ LG++IA L+ A+SG Y+LLSN YA+ GKW+E ++R+ MK +G+QKEPGCS+IE
Sbjct: 437 MALGQRIADFLVANGLANSGMYILLSNIYAAVGKWEEVARVRSMMKASGIQKEPGCSAIE 496
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
++ +++EF+ GD+ HP ++IY + ++ +VK G+ P TE+VLHD+++ KE ALA+H
Sbjct: 497 IDRKVYEFVAGDMSHPCTDEIYAMLDKMNALVKEHGHVPQTELVLHDLDEATKEKALAVH 556
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LA+ +GLIS++P +TI++VKNLR C+DCH+++KLI+ IT RKI+ RDRNRFHHF +G
Sbjct: 557 SEKLAVAFGLISSRPGSTIKIVKNLRACSDCHAVLKLISKITSRKIVFRDRNRFHHFVDG 616
Query: 481 TCSCGDYW 488
+C+CGDYW
Sbjct: 617 SCTCGDYW 624
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 149/369 (40%), Gaps = 74/369 (20%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
E+H V++ GL S+R+ +L Y G
Sbjct: 42 ELHAAVVRKGLDSDRAVAFRLQRAYAASGR------------------------------ 71
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
++++ + R K T+ +T+ I G L L +M + + P T+ L
Sbjct: 72 --LDHSLTLLGRTKDPTTIFYTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHTLSASL 129
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMY---------------------- 161
AC L LGR +H+Y K + + V AL++MY
Sbjct: 130 PACR---GLSLGRALHAYAFKLALSGDSYVATALLSMYARAGDAAAARALFDEMPDPHVV 186
Query: 162 ---------SRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG 212
+ G +D A ++F+ + +D +N++I G HG+ EA+++FR M+
Sbjct: 187 SVTAMLTCYANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSS 246
Query: 213 IRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
P +VT V VL+A + G V+ G + + ++ + +VD+ + G E+A
Sbjct: 247 AEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDA 306
Query: 273 ---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG-TYVLLSNA 328
+ I N I ++ ++++ +HG + ++ +L D + T++ L NA
Sbjct: 307 VAVFHGIGNKDI----VVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNA 362
Query: 329 YASSGKWKE 337
+ SG +E
Sbjct: 363 CSHSGLVEE 371
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 105/279 (37%), Gaps = 44/279 (15%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+ACS +H+ + + +D + V L Y+ G +D +L + K+
Sbjct: 30 LLAACSTA---RRASELHAAVVRKGLDSDRAVAFRLQRAYAASGRLDHSLTLLGRTKDPT 86
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC---SHG-GLVDLGF 237
Y S I + G + + + +M+++G+ PT T L AC S G L F
Sbjct: 87 TIFYTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHTLSASLPACRGLSLGRALHAYAF 146
Query: 238 EIFQS-----------------------MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYD 274
++ S D +P + ++ + +G ++A
Sbjct: 147 KLALSGDSYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYANMGALDDARR 206
Query: 275 FITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRS-ADSGTYVLLSNAYAS-- 331
+ D I +++ HGK Q+ +R+L + D T VL+ +A A
Sbjct: 207 LFDGLP-RKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQLG 265
Query: 332 ---SGKW-------KEAVQIRAKMKEAGVQKEPGCSSIE 360
SGKW VQ+ ++ A V C S+E
Sbjct: 266 TVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLE 304
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 241/494 (48%), Positives = 344/494 (69%), Gaps = 8/494 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
R +H +K GL S+ LV+ Y + G+ A +LFD MPE +V+ T M+ CY
Sbjct: 136 ARAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPE-RSLVSYTAMLTCYA 194
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-------NVRP 114
+HG++ A +F + +KD VCW MIDG ++G AL FR+M VRP
Sbjct: 195 KHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRP 254
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
NE+T+V VLS+C Q+GALE G+W+HSY+ + I +N VG AL++MY +CG ++ A +VF
Sbjct: 255 NEITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVF 314
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
+ M+ +DV +NS+I G +HG S EA+++F EM G++P+ +TFV VL AC+H GLV
Sbjct: 315 DVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVS 374
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
G+E+F SM YG+EP++EHYGC+V+LL R GR +EAYD + +M++ PD ++ G+LL A
Sbjct: 375 KGWEVFDSMKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWA 434
Query: 295 CKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
C+IH + LGE+IA+ L+ A SGTYVLLSN YA++ W ++R+ MK +GV+KEP
Sbjct: 435 CRIHSNVSLGEEIAEILVSNGLASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKEP 494
Query: 355 GCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKE 414
GCSSIEV N +HEF+ GD RHP+ + IY ++++ +K Y+P T+ VLHDI + EKE
Sbjct: 495 GCSSIEVKNRVHEFVAGDRRHPRSKDIYSMLEKMNGWLKERHYTPKTDAVLHDIGEQEKE 554
Query: 415 WALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRF 474
+L +HSE+LA+ +GLIST P I++VKNLRVC DCH+++K+++ I+ RKII+RDRNRF
Sbjct: 555 QSLEVHSEKLALAFGLISTSPGAAIKIVKNLRVCLDCHAVMKIMSKISGRKIIMRDRNRF 614
Query: 475 HHFENGTCSCGDYW 488
HHFENG+CSC DYW
Sbjct: 615 HHFENGSCSCRDYW 628
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 143/337 (42%), Gaps = 52/337 (15%)
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
Y G + ++ +F R + WT +I+ AL + +M ++PN T+
Sbjct: 65 YASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTL 124
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+L AC+ L R +HS+ K + + V L++ Y+R GD+ A ++F+ M E
Sbjct: 125 SSLLKACT----LHPARAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPE 180
Query: 180 R-------------------------------DVTTYNSLIAGLAMHGRSIEAVEMFREM 208
R DV +N +I G A HG EA+ FR+M
Sbjct: 181 RSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKM 240
Query: 209 INQG-------IRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVD 261
+ +RP ++T V VL++C G ++ G + S + GI+ + +VD
Sbjct: 241 MMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECG-KWVHSYVENNGIKVNVRVGTALVD 299
Query: 262 LLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG----KLQLGEQIAKRLLDCRSA 317
+ + G E+A M+ D + S++ IHG LQL ++ + + +
Sbjct: 300 MYCKCGSLEDARKVFDVME-GKDVVAWNSMIMGYGIHGFSDEALQLFHEMC--CIGVKPS 356
Query: 318 DSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
D T+V + A A +G + ++ MK+ G EP
Sbjct: 357 DI-TFVAVLTACAHAGLVSKGWEVFDSMKD-GYGMEP 391
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 236/490 (48%), Positives = 343/490 (70%), Gaps = 3/490 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
G+ IH VLK GL + LV++Y K G+ A ++FD MPE +V+ST MI CY
Sbjct: 142 SGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRMPE-RSLVSSTAMITCY 200
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTI 119
+ G VE A +F R+ +D V W MIDG ++G + AL LF+++ D +P+E+T+
Sbjct: 201 AKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQKLLADGKPKPDEITV 260
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V LSACSQ+GALE GRWIH ++ RI LN V ALI+MYS+CG +++A+ VF +
Sbjct: 261 VAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLVFNDTPR 320
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMIN-QGIRPTKVTFVGVLNACSHGGLVDLGFE 238
+D+ +N++I G AMHG S +A+ +F EM G++PT +TF+G L AC+H GLV+ G +
Sbjct: 321 KDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVNEGIQ 380
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
IF+SM ++YGI+P+IEHYGC+V LL R G+ + AY+ I NM + D ++ S+L +CK+H
Sbjct: 381 IFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNMEADSVLWSSVLGSCKLH 440
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
G+ LG++IA+ L+ ++SG YVLLSN YA G ++ ++R MKE G+ KEPG S+
Sbjct: 441 GEFMLGKEIAEYLIGQNISNSGIYVLLSNIYALVGDYEGVAKVRNLMKEKGIVKEPGIST 500
Query: 359 IEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALA 418
IE++N++HEF GD H + ++IY ++++ + +K GY P+T VLHD+E+ EKE +L
Sbjct: 501 IEIDNKVHEFRAGDREHLKSKEIYTMLRKMSERIKSHGYVPNTNTVLHDLEETEKERSLQ 560
Query: 419 IHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFE 478
+HSERLAI YGLISTKP + +++ KNLRVC+DCH++ KLI+ IT RKI++RDRNRFHHF
Sbjct: 561 VHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFS 620
Query: 479 NGTCSCGDYW 488
+G+CSC D+W
Sbjct: 621 DGSCSCDDFW 630
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 154/336 (45%), Gaps = 53/336 (15%)
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVT 118
Y HG + ++ +F + D +TA I+ NG +A L+ ++ + PNE T
Sbjct: 71 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSQINPNEFT 130
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
+L +CS + G+ IH+++ K + L+ V L+++Y++ GD+ A +VF+ M
Sbjct: 131 FSSILKSCST----KSGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRMP 186
Query: 179 -------------------------------ERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
ERD+ ++N +I G + HG +A+ +F++
Sbjct: 187 ERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQK 246
Query: 208 MINQG-IRPTKVTFVGVLNACSHGGLVDLG--FEIFQSMTRDYGIEPQIEHYGCIVDLLS 264
++ G +P ++T V L+ACS G ++ G +F + +R I ++ ++D+ S
Sbjct: 247 LLADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSR---IRLNVKVCTALIDMYS 303
Query: 265 RVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG---- 320
+ G EEA + N D + ++++ +HG Q A RL D +G
Sbjct: 304 KCGSLEEAV-LVFNDTPRKDIVAWNAMITGYAMHGY----SQDALRLFDEMQGITGLQPT 358
Query: 321 --TYVLLSNAYASSGKWKEAVQIRAKM-KEAGVQKE 353
T++ A A +G E +QI M +E G++ +
Sbjct: 359 DITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPK 394
>gi|242047142|ref|XP_002461317.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
gi|241924694|gb|EER97838.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
Length = 640
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 236/496 (47%), Positives = 340/496 (68%), Gaps = 9/496 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +HG +KL L L+ +Y + G+ A LFD M VV+ T M+ CY
Sbjct: 145 GRALHGYAVKLALSGEPYVATALLGMYARAGDAAAARVLFDGMQPDPHVVSVTAMLTCYA 204
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ GL+++A +F + KD +CW AM+DG ++G + AL LFR M R V P+EV++V
Sbjct: 205 KMGLLDDARSLFDGLPSKDLICWNAMMDGYTQHGRPSEALRLFRRMLRSGVEPDEVSVVL 264
Query: 122 VLSACSQLGALELGRWIHSYM---GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
LSA +QLG E GRW+HS++ R+ LN VG ALI+MY +CG ++ A+ VF ++
Sbjct: 265 ALSAVAQLGTAESGRWLHSFVTNSSSRRVRLNARVGTALIDMYYKCGSLEDAVAVFGDLG 324
Query: 179 --ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
+RD+ +N+++ G AMHG S EA+ F ++ QG+ PT +TF+GVLNACSH GLVD G
Sbjct: 325 AGDRDIVAWNAMVNGYAMHGHSREALAAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEG 384
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM-KIAPDHIMLGSLLSAC 295
E+F+SM +YGIEP++EHYGC+VDLL R GR EEA++ + +M + PD +M SLL+AC
Sbjct: 385 RELFRSMAEEYGIEPKVEHYGCMVDLLGRAGRVEEAFELVQSMTRTKPDAVMWASLLAAC 444
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
++H ++LG++IA L+ A+SGTYVLLSN YA++G W+E ++RA M+ +G+QKEPG
Sbjct: 445 RLHKNMELGQRIADHLVANGLANSGTYVLLSNMYAAAGNWREVGRVRAMMRASGIQKEPG 504
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTE---VVLHDIEDWE 412
CS++EV + EF+ GD HP+ +IY K++E+ + + G+ P TE L D +
Sbjct: 505 CSAVEVGRRVVEFVAGDRSHPRAAEIYAKLEEVNGMARARGHVPRTELVLHDLDDDDTAA 564
Query: 413 KEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRN 472
KE ALA+HSE+LA+ +GLIST P T I++VKNLR C DCH+++KL++ +T RKI+ RDRN
Sbjct: 565 KEQALAVHSEKLALAFGLISTPPGTAIKIVKNLRACADCHAVLKLVSEVTGRKIVFRDRN 624
Query: 473 RFHHFENGTCSCGDYW 488
RFHHF +G+C+CGDYW
Sbjct: 625 RFHHFVDGSCTCGDYW 640
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 125/325 (38%), Gaps = 67/325 (20%)
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN-VRPNEV 117
Y G ++ A + R V +T+ I G AL L EM + + P
Sbjct: 71 AYAASGRLDLAVALLRRTPDPTAVFYTSAIHAHSSRGLHHAALALLSEMLLSHGLLPTAH 130
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMY---------------- 161
T+ L AC G L +GR +H Y K + V AL+ MY
Sbjct: 131 TLSASLPAC---GGLAVGRALHGYAVKLALSGEPYVATALLGMYARAGDAAAARVLFDGM 187
Query: 162 ----------------SRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMF 205
++ G +D A +F+ + +D+ +N+++ G HGR EA+ +F
Sbjct: 188 QPDPHVVSVTAMLTCYAKMGLLDDARSLFDGLPSKDLICWNAMMDGYTQHGRPSEALRLF 247
Query: 206 REMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSR 265
R M+ G+ P +V+ V L+A + G + G + +T V L +R
Sbjct: 248 RRMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVTNSSSRR---------VRLNAR 298
Query: 266 VGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLL 325
VG + +M + GSL A + G L G++ D + +
Sbjct: 299 VGTA------LIDM-----YYKCGSLEDAVAVFGDLGAGDR-----------DIVAWNAM 336
Query: 326 SNAYASSGKWKEAVQIRAKMKEAGV 350
N YA G +EA+ +++ G+
Sbjct: 337 VNGYAMHGHSREALAAFGQLRAQGL 361
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 235/490 (47%), Positives = 338/490 (68%), Gaps = 3/490 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
G+ IH VLK GL + LV++Y K G+ A ++FD MPE +V+ST MI CY
Sbjct: 144 SGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE-RSLVSSTAMITCY 202
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTI 119
+ G VE A +F + +D V W MIDG ++G AL LF+++ + +P+E+T+
Sbjct: 203 AKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITV 262
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V LSACSQ+GALE GRWIH ++ RI LN V LI+MYS+CG +++A+ VF +
Sbjct: 263 VAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPR 322
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMIN-QGIRPTKVTFVGVLNACSHGGLVDLGFE 238
+D+ +N++IAG AMHG S +A+ +F EM G++PT +TF+G L AC+H GLV+ G
Sbjct: 323 KDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIR 382
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
IF+SM ++YGI+P+IEHYGC+V LL R G+ + AY+ I NM + D ++ S+L +CK+H
Sbjct: 383 IFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLH 442
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
G LG++IA+ L+ +SG YVLLSN YAS G ++ ++R MKE G+ KEPG S+
Sbjct: 443 GDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGIST 502
Query: 359 IEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALA 418
IE+ N++HEF GD H + ++IY ++++ + +K GY P+T VL D+E+ EKE +L
Sbjct: 503 IEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQ 562
Query: 419 IHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFE 478
+HSERLAI YGLISTKP + +++ KNLRVC+DCH++ KLI+ IT RKI++RDRNRFHHF
Sbjct: 563 VHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFT 622
Query: 479 NGTCSCGDYW 488
+G+CSCGD+W
Sbjct: 623 DGSCSCGDFW 632
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 154/336 (45%), Gaps = 53/336 (15%)
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVT 118
Y HG + ++ +F + D +TA I+ NG +A L+ ++ + PNE T
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
+L +CS + G+ IH+++ K + ++ V L+++Y++ GD+ A +VF+ M
Sbjct: 133 FSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMP 188
Query: 179 -------------------------------ERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
ERD+ ++N +I G A HG +A+ +F++
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 208 MINQG-IRPTKVTFVGVLNACSHGGLVDLG--FEIFQSMTRDYGIEPQIEHYGCIVDLLS 264
++ +G +P ++T V L+ACS G ++ G +F +R I ++ ++D+ S
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSR---IRLNVKVCTGLIDMYS 305
Query: 265 RVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG---- 320
+ G EEA + N D + ++++ +HG Q A RL + +G
Sbjct: 306 KCGSLEEAV-LVFNDTPRKDIVAWNAMIAGYAMHGY----SQDALRLFNEMQGITGLQPT 360
Query: 321 --TYVLLSNAYASSGKWKEAVQIRAKM-KEAGVQKE 353
T++ A A +G E ++I M +E G++ +
Sbjct: 361 DITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPK 396
>gi|297793453|ref|XP_002864611.1| hypothetical protein ARALYDRAFT_496037 [Arabidopsis lyrata subsp.
lyrata]
gi|297310446|gb|EFH40870.1| hypothetical protein ARALYDRAFT_496037 [Arabidopsis lyrata subsp.
lyrata]
Length = 534
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 237/400 (59%), Positives = 308/400 (77%), Gaps = 21/400 (5%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
E REIH QVLKLG S+RS LKL+E+YGK GE DA ++FDEMP+ + VVA TVMINCY
Sbjct: 141 ECREIHSQVLKLGFGSSRSVGLKLMEIYGKSGELADAKKVFDEMPDRDQVVA-TVMINCY 199
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
E G ++ A E+F VK+KDTVCWTAMIDGLVRN EM +AL+LFREMQ
Sbjct: 200 SECGCIKEALELFQDVKIKDTVCWTAMIDGLVRNREMNKALELFREMQL----------- 248
Query: 121 CVLSACSQLGALELGRW-----IHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
+ L A RW +HS++ +++L++ VG ALINMYSRCGDI+ A +VF+
Sbjct: 249 ----SVFYLPARIWVRWSSGAGVHSFVENQKMELSNFVGNALINMYSRCGDINVAKRVFK 304
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
M+++DV +YN++I+GLAMHG S+EA+ +FR+M+N+G RP +VT V +LNACSHGGL+D+
Sbjct: 305 GMRDKDVISYNTMISGLAMHGASVEAINVFRDMVNRGFRPNQVTLVALLNACSHGGLLDI 364
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G E+F SM R + +EPQIEHYGCIVDLL RVGR EEAY FI NM I PDHIMLG+LLSAC
Sbjct: 365 GLEVFNSMWRVFSVEPQIEHYGCIVDLLGRVGRLEEAYRFIENMLIEPDHIMLGALLSAC 424
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
KIHG ++LGE+IAKRL + + DSGTYVLLS+ YASSGKWKE+ +IR M+E+G++KEPG
Sbjct: 425 KIHGNMELGEKIAKRLFESENPDSGTYVLLSHIYASSGKWKESTEIRESMRESGIEKEPG 484
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLE 395
CS+IEV+N+IHEF +GDI HP++E IY+++QEL + ++ +
Sbjct: 485 CSTIEVDNQIHEFHVGDIAHPRKEAIYQRLQELNRNLRFK 524
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 132/301 (43%), Gaps = 68/301 (22%)
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
++ A++VF V + +TAMIDG V +G A + L+ M +V P+ I VL A
Sbjct: 77 IDYAYDVFRYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHSSVLPDNYVITSVLKA 136
Query: 126 CSQLGALELGRWIHSYM-----GKHR--------------------------IDLNHIVG 154
C L+ R IHS + G R D + +V
Sbjct: 137 C----GLDECREIHSQVLKLGFGSSRSVGLKLMEIYGKSGELADAKKVFDEMPDRDQVVA 192
Query: 155 GALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM-INQGI 213
+IN YS CG I +AL++F+++K +D + ++I GL + +A+E+FREM ++
Sbjct: 193 TVMINCYSECGCIKEALELFQDVKIKDTVCWTAMIDGLVRNREMNKALELFREMQLSVFY 252
Query: 214 RPTKV----------------------TFVG--VLNACSHGGLVDLGFEIFQSMTRDYGI 249
P ++ FVG ++N S G +++ +F+ M RD
Sbjct: 253 LPARIWVRWSSGAGVHSFVENQKMELSNFVGNALINMYSRCGDINVAKRVFKGM-RD--- 308
Query: 250 EPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQ 306
+ Y ++ L+ G EA + +M P+ + L +LL+AC G L +G +
Sbjct: 309 -KDVISYNTMISGLAMHGASVEAINVFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLE 367
Query: 307 I 307
+
Sbjct: 368 V 368
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 7/107 (6%)
Query: 138 IHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR 197
IH+ + + D + V LI + S ID A VF + +V Y ++I G GR
Sbjct: 48 IHAKIIRTFHDQDAFVVFELIRVCSTLDSIDYAYDVFRYVSNPNVYLYTAMIDGFVSSGR 107
Query: 198 SIEAVEMFREMINQGIRPTKVTFVGVLNACS-------HGGLVDLGF 237
S + V ++ MI+ + P VL AC H ++ LGF
Sbjct: 108 SADGVSLYHRMIHSSVLPDNYVITSVLKACGLDECREIHSQVLKLGF 154
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/489 (48%), Positives = 340/489 (69%), Gaps = 1/489 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+++HG V+KLGL S+ R LV +Y CG KDA LF + +VV VMI+ Y
Sbjct: 141 EGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNVVLWNVMIDGY 200
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V G + + E+F + K V W MI G +NG A+++F +MQ +V PN VT+V
Sbjct: 201 VRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLV 260
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VL A S+LGA+ELG+W+H + K+ I+++ ++G ALI+MYS+CG IDKA+QVFE ++ +
Sbjct: 261 SVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNK 320
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
++ T++++I GLAMHGR+ +A++ F M G+ P+ V ++GVL+ACSH GLV+ G I
Sbjct: 321 KNPITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRSI 380
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+ M G+ P+IEHYGC+VDLL R G EEA I NM + PD ++L +LL ACK+HG
Sbjct: 381 YYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDDVILKALLGACKMHG 440
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+++GE+IAK L+ DSG+YV LSN +AS G W+ V++R KMKE ++K+PGCS I
Sbjct: 441 NIEMGERIAKILMGWYPHDSGSYVALSNMFASEGNWEGVVKVRLKMKELDIRKDPGCSWI 500
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E++ IHEF++ D HP+ E I+ ++E+ ++ GY P+T VL ++++ EK+ AL
Sbjct: 501 ELDGVIHEFLVEDDSHPRAEGIHSMLEEMSDRLRSVGYRPNTTQVLLNMDEKEKQSALHY 560
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE++AI +GLIST+P T +++VKNLRVC DCHS IKL++ I RKIIVRDR RFHHFEN
Sbjct: 561 HSEKIAIAFGLISTRPQTPLQIVKNLRVCEDCHSSIKLVSKIYNRKIIVRDRKRFHHFEN 620
Query: 480 GTCSCGDYW 488
G+CSC DYW
Sbjct: 621 GSCSCMDYW 629
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 124/277 (44%), Gaps = 45/277 (16%)
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMA-------RALDLFREMQRDN-VRPNEV 117
++ A + FS++ + W +I L + + AL F M D V PN+
Sbjct: 65 IKYARKFFSQIHHPNCFSWNTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKF 124
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGK--------------------------------H 145
T CVL AC++L +E G+ +H ++ K
Sbjct: 125 TFPCVLKACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQT 184
Query: 146 RIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMF 205
R++ N ++ +I+ Y R GD+ + ++F+ M + V ++N +I+G A +G EA+EMF
Sbjct: 185 RLEGNVVLWNVMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMF 244
Query: 206 REMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHY--GCIVDLL 263
+M + P VT V VL A S G ++LG + ++ E +I+ ++D+
Sbjct: 245 HDMQLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKN---EIEIDDVLGSALIDMY 301
Query: 264 SRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
S+ G ++A ++ + I +++ +HG+
Sbjct: 302 SKCGSIDKAVQVFEGIRNKKNPITWSAIIGGLAMHGR 338
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 231/489 (47%), Positives = 332/489 (67%), Gaps = 2/489 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+++H KLG S+ + L+ +Y CG A ++FD+M VV+ MI Y
Sbjct: 93 EGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVN-KSVVSWATMIGAY 151
Query: 61 VEHGLVENAFEVFSRVKVKDTV-CWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
+ L A ++F R+++ + CW MI+G V + + AL LF EMQ V+ ++VT+
Sbjct: 152 AQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTM 211
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+L AC+ LGALELG+W+H Y+ K +I+++ +G AL++MY++CG I+ A++VF+EM E
Sbjct: 212 ASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPE 271
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+DV T+ +LI GLAM G+ ++A+E+F EM ++P +TFVGVL ACSH GLV+ G
Sbjct: 272 KDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAY 331
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F SM YGI+P IEHYGC+VD+L R GR EA D I NM +APD+ +L LLSAC+IHG
Sbjct: 332 FNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHG 391
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
L + E+ A++L++ + GTYVLLSN Y+S W+ A ++R M E ++K PGCS+I
Sbjct: 392 NLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAI 451
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
EV +HEF+ GD+ HPQ +IY+ + ++ + +K GY P VL D+++ EKE L++
Sbjct: 452 EVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKENELSL 511
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GL+ST P T IRVVKNLRVC+DCHS +K I+ + R+IIVRDRNRFHHF
Sbjct: 512 HSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTK 571
Query: 480 GTCSCGDYW 488
G+CSC D+W
Sbjct: 572 GSCSCRDFW 580
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 125/296 (42%), Gaps = 46/296 (15%)
Query: 52 ASTVMINCYV-EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD 110
AS ++ C + + G + A VF+++ T ++I G +A+ ++ M
Sbjct: 13 ASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQ 72
Query: 111 NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
+ P+ T + +C G L G+ +H + K + + L+NMYS CG + A
Sbjct: 73 GLDPDRFTFPSLFKSC---GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSA 129
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE------------MIN-------- 210
+VF++M + V ++ ++I A EA+++FR MIN
Sbjct: 130 RKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDY 189
Query: 211 ------------QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGC 258
G++ KVT +L AC+H G ++LG + + ++ IE +
Sbjct: 190 EEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKE-KIEVDVALGTA 248
Query: 259 IVDLLSRVGRPEEAY---------DFITNMKIAPDHIMLGSLLSACKIHGKLQLGE 305
+VD+ ++ G E A D +T + M G L A ++ ++Q+ E
Sbjct: 249 LVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSE 304
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/487 (47%), Positives = 340/487 (69%), Gaps = 1/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +HG V KLGL+SN + +V LY CGE A ++FD+MP+ DV+ +MI V
Sbjct: 132 GKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQ-RDVITWNIMIARLV 190
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G E A+++F+ + ++ WT+MI G + G+ A+DLF EM+ + PNEVT+V
Sbjct: 191 KMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVA 250
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL AC+ +G L LGR IH + + + N V LI+MY +CG ++ A ++F+ M+ER
Sbjct: 251 VLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERT 310
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +++++IAGLA HGR+ +A+ +F +MIN G++P VTF+G+L+ACSH G+V+ G + F
Sbjct: 311 VVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFA 370
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SMTRDYGI P+IEHYGC+VDL SR G +EA++FI NM IAP+ ++ G+LL CK+H +
Sbjct: 371 SMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNI 430
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+L E+ + L + G YV+LSN YA +G+W++ ++R M++ GV+K PG SSI V
Sbjct: 431 KLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMV 490
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
++ F+ GD HPQ E+I++ ++L Q +KL+GY P+T VVL D+E+ +KE L HS
Sbjct: 491 EGVVYNFVAGDDTHPQTEEIFQTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEKFLYRHS 550
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ +GLI T P T IR++KNLRVC DCH+ +K+I+ ++ R+I+VRDRNRFH F+NG+
Sbjct: 551 EKLAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRFHCFKNGS 610
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 611 CSCGDYW 617
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 185/438 (42%), Gaps = 59/438 (13%)
Query: 72 VFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGA 131
+F + + W + A A+ LF ++ ++ P+ T VL ACS+L
Sbjct: 69 IFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLD 128
Query: 132 LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYN----- 186
+ G+ +H Y+ K + N + ++++Y+ CG+I A +VF++M +RDV T+N
Sbjct: 129 VRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIAR 188
Query: 187 --------------------------SLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTF 220
S+I G A G+S EA+++F EM + G+ P +VT
Sbjct: 189 LVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTV 248
Query: 221 VGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
V VL AC+ G + LG I R G E I ++D+ + G E+A NM+
Sbjct: 249 VAVLVACADMGNLVLGRRIHDFSNRS-GYEKNIRVCNTLIDMYVKCGCLEDACRIFDNME 307
Query: 281 IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNAYASSGKWKEAV 339
+ ++++ HG+ + + ++++ ++ T++ + +A + G ++
Sbjct: 308 -ERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGR 366
Query: 340 QIRAKM-KEAGVQ---KEPGC-----SSIEVNNEIHEFILGDIRHPQ------------- 377
+ A M ++ G+ + GC S + E HEFI+ P
Sbjct: 367 KYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKV 426
Query: 378 REQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYT 437
+ I + + + KL+ + VVL +I W +L G+ T ++
Sbjct: 427 HKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWS 486
Query: 438 TIR---VVKNLRVCNDCH 452
+I VV N +D H
Sbjct: 487 SIMVEGVVYNFVAGDDTH 504
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 95/217 (43%), Gaps = 13/217 (5%)
Query: 138 IHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR 197
+H+++ K L+ + + ++ + A +F+ + +VT +N+ + A
Sbjct: 34 LHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEGDS 93
Query: 198 SIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL-GFEIFQSMTRDYGIEPQIEHY 256
+A+ +F + I P T VL ACS L+D+ +I G++ +
Sbjct: 94 PADAISLFYRLREFDISPDHYTCSFVLKACSR--LLDVRNGKIVHGYVEKLGLQSNMFLQ 151
Query: 257 GCIVDLLS---RVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
IV L + +G + +D + + +IM+ L+ G +L ++ +R +
Sbjct: 152 NMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPER--N 209
Query: 314 CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
RS S + YA GK KEA+ + +M++AG+
Sbjct: 210 VRSWTS-----MIGGYAQCGKSKEAIDLFLEMEDAGL 241
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/487 (47%), Positives = 337/487 (69%), Gaps = 1/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +HG V K+G RSN + +V LY CGE +A LF++MP+ DVV +MI +
Sbjct: 147 GRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQ-RDVVTWNIMIAQLI 205
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G E A+++FSR+ ++ WT+MI G V+ G+ A+ LF +M+ V+ NEVT+V
Sbjct: 206 KQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVA 265
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL+AC+ LGAL+LG IH Y +H N + LI+MY +CG +++A +VFEEM+ER
Sbjct: 266 VLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERT 325
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +++++I GLAMHGR+ EA+ +F +M GI P VTF+G+L+ACSH GL+ G F
Sbjct: 326 VVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFA 385
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SMTRDYGI PQIEHYGC+VDLLSR G EA++FI NM + P+ ++ G+LL AC++H +
Sbjct: 386 SMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNV 445
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++ E+ K LL+ + G YV+LSN YA +G+W++ ++R MK+ V+K PG SSI V
Sbjct: 446 EMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITV 505
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ +HEF+ G+ HP EQI+++ +EL + ++L+GY P+T VVL DIE+ EK ++ HS
Sbjct: 506 DGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHS 565
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ +GL++T T IR++KNLR+C DCHS KLI+ I R+I+VRDRNRFH F + +
Sbjct: 566 EKLALVFGLMNTPAETPIRIMKNLRICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNS 625
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 626 CSCRDYW 632
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 150/342 (43%), Gaps = 49/342 (14%)
Query: 80 DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIH 139
+T W + + L A+ LF +++ +V P+ T VL AC L L GR +H
Sbjct: 92 ETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILH 151
Query: 140 SYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYN------------- 186
+ K N + ++++Y+ CG++ +A +FE+M +RDV T+N
Sbjct: 152 GVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHE 211
Query: 187 ------------------SLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
S+IAG G++ EA+ +F +M G++ +VT V VL AC+
Sbjct: 212 GAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACA 271
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDH 285
G +DLG I + R +G + + ++D+ + G EEA M+ +
Sbjct: 272 DLGALDLGMRIHEYSNR-HGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWS 330
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG-TYVLLSNAYASSGKWKEAVQIRAK 344
M+G L +HG+ + ++ + +G T++ L +A + G E + A
Sbjct: 331 AMIGGL----AMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFAS 386
Query: 345 M-KEAGVQKE---PGC-----SSIEVNNEIHEFILGDIRHPQ 377
M ++ G+ + GC S + +E HEFIL P
Sbjct: 387 MTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPN 428
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 235/489 (48%), Positives = 337/489 (68%), Gaps = 2/489 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+++H V K G SN R LV+LY K G A +LFDEM DVV+ +I+ Y
Sbjct: 145 EGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMV-VRDVVSWNTLISGY 203
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN-VRPNEVTI 119
G+V+ A VF + K+ V W+ MI G RN + A A++LFR+MQ + + PN+VT+
Sbjct: 204 CFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTL 263
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V VLSAC+ LGAL+LG+WIH ++ +++I++ +G AL +MY++CG + +A VF EM E
Sbjct: 264 VSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHE 323
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
RDV +++ +I GLAM+G + EA F EMI G+ P ++F+G+L AC+H GLVD G E
Sbjct: 324 RDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEY 383
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F M + YGI P+IEHYGC+VDLLSR GR ++A I +M + P+ I+ G+LL C+I+
Sbjct: 384 FDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYK 443
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+ GE++ R+L+ S SG+ V L+N YAS G+ +A R +M++ K PGCS I
Sbjct: 444 DAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWI 503
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E+NN ++EF +GD HPQ +IY ++ELK +K+ GY P T++V+H+I++ EKE AL+
Sbjct: 504 EINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALST 563
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LA+ +GLI+T TTIR+VKNLRVCNDCH IK+I+ I +R+I+VRDR+RFHHF++
Sbjct: 564 HSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKIVEREIVVRDRSRFHHFKD 623
Query: 480 GTCSCGDYW 488
G CSC DYW
Sbjct: 624 GKCSCNDYW 632
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 146/358 (40%), Gaps = 76/358 (21%)
Query: 23 KLVELYGKCGEFKDAMQLFD--------EMPECNDVVASTVMINCYVEHGLVENAFEVFS 74
K + L +C QLF+ +P + + + I HG + ++ +F+
Sbjct: 23 KTIHLLLRCATQLSMRQLFEIQAQIIASPIPSIDPNIIAVKFIGVSSSHGNLRHSVLIFN 82
Query: 75 R-VKVKDTVCWTAMIDGLVRNGEMARALDLFRE--MQRDNVRPNEVTIVCVLSACSQLGA 131
+ + + A++ ++ + F + + P+E T VL AC+ L
Sbjct: 83 HFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQ 142
Query: 132 LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAG 191
+ G+ +H ++ K+ + N V +L+++Y + G A ++F+EM RDV ++N+LI+G
Sbjct: 143 VLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISG 202
Query: 192 LAMHG-------------------------------RSIEAVEMFREMINQ-GIRPTKVT 219
G + +A+E+FR+M ++ G+ P VT
Sbjct: 203 YCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVT 262
Query: 220 FVGVLNACSHGGLVDLGFEIFQSMTRDY---------GIEPQIEHYGCIVDL-------- 262
V VL+AC+H G +DLG I + + R+ + GC+++
Sbjct: 263 LVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMH 322
Query: 263 -------------LSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLG 304
L+ G EA++F M + P+ I LL+AC G + G
Sbjct: 323 ERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKG 380
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 237/502 (47%), Positives = 342/502 (68%), Gaps = 14/502 (2%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDE---MPECN--------- 48
EGR++HG +K GL S+ +V +Y CG +DA +LF + C+
Sbjct: 130 EGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRV 189
Query: 49 --DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
DVV VMI+ YV G +E A +F + + V W MI G ++G A+++FRE
Sbjct: 190 DGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFRE 249
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
MQ V PN VT+V VL A S+LGALELG+W+H Y ++ I ++ ++G ALI+MY++CG
Sbjct: 250 MQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGS 309
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
I+KALQVFE + +R+V T++++IAGLAMHGR+ + ++ F +M G+ P+ VT++G+L+A
Sbjct: 310 IEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSA 369
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
CSH GLV+ G F M R G+EP+IEHYGC+VDLL R G EE+ + I NM I PD +
Sbjct: 370 CSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDV 429
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
+ +LL ACK+HG +++G+++A+ L++ DSG+YV LSN YAS G W+ ++R MK
Sbjct: 430 IWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMK 489
Query: 347 EAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH 406
E V+K+PGCS IE++ IHEF++ D HP+ ++I+ +QE+ + + L GY P+T VL
Sbjct: 490 EMDVRKDPGCSWIELDGVIHEFLVEDDSHPKSKKIHSMLQEMSRNLILVGYRPNTTQVLT 549
Query: 407 DIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKI 466
++++ +KE +L HSE++AI +GLIST+P T +R+ KNLR+C DCHS IKLI+ I KRKI
Sbjct: 550 NMDEEDKESSLNYHSEKIAIAFGLISTQPQTPLRITKNLRICEDCHSSIKLISKIYKRKI 609
Query: 467 IVRDRNRFHHFENGTCSCGDYW 488
IVRDR RFHHF NG+CSC DYW
Sbjct: 610 IVRDRKRFHHFVNGSCSCMDYW 631
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 141/337 (41%), Gaps = 56/337 (16%)
Query: 19 STRLKLVELYGKCGEFKDAMQLFDEM---PECNDVVASTVMI--NCYVEHGLVENAFEVF 73
+T L + C +D QL +M + D +A+ ++ + +H ++ A ++F
Sbjct: 9 TTSLWPPSSFFPCKTMQDLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIF 68
Query: 74 SRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTIVCVLSACSQLGAL 132
+ + + +I L + + AL +F EM D +V PN T V AC + L
Sbjct: 69 RSMHRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERL 128
Query: 133 ELGRWIHSYMGKHRIDLNHIVGGALINMYSRC---------------------------- 164
GR +H K +D + V ++ MY C
Sbjct: 129 REGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRR 188
Query: 165 ------------------GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
G+++ A +F+EM +R V ++N +IAG A G EAVE+FR
Sbjct: 189 VDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFR 248
Query: 207 EMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI-FQSMTRDYGIEPQIEHYGCIVDLLSR 265
EM + P VT V VL A S G ++LG + ++ + G++ + ++D+ ++
Sbjct: 249 EMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLG--SALIDMYAK 306
Query: 266 VGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
G E+A + + + ++++ +HG+ +
Sbjct: 307 CGSIEKALQVFEGLP-KRNVVTWSTIIAGLAMHGRAK 342
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 222/466 (47%), Positives = 329/466 (70%), Gaps = 4/466 (0%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
+++ Y + GE + A +LF+ MP+ + + MI+ + G+VE A E F +K +D +
Sbjct: 210 MIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEIS 269
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W+AMIDG ++ G AL++F +MQ++ +RP + + VLSAC+ LGAL+ GRWIH+Y
Sbjct: 270 WSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAK 329
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
++ I L+ ++G +L++MY++CG ID A +VFE+M ++V+++N++I GLAMHGR+ +A++
Sbjct: 330 RNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAID 389
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
+F +M I P ++TFVGVLNAC+HGGLV G IF SM ++YG+EPQIEHYGCIVDLL
Sbjct: 390 LFSKM---DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLL 446
Query: 264 SRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV 323
R G EA ++++ P + G+LL AC+ HG ++LGE++ K LL+ +SG Y
Sbjct: 447 GRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYT 506
Query: 324 LLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVN-NEIHEFILGDIRHPQREQIY 382
LLSN YA +G+W+E ++R MKE G++ PG S I++ E+H+FI+GD HPQ + IY
Sbjct: 507 LLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIY 566
Query: 383 KKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVV 442
+ + ++K+ +++EGY P VL DI++ EKE A+ HSE+LAI +GLI+T P TTIR+V
Sbjct: 567 QMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIV 626
Query: 443 KNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
KNLRVC DCHS KLI+ + R+IIVRDR R+HHF NG CSC D+W
Sbjct: 627 KNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 672
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 137/340 (40%), Gaps = 104/340 (30%)
Query: 67 ENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSAC 126
E++ VF V+ + W MI + N E +A+ L+ EM + RPN+ T VL AC
Sbjct: 88 ESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKAC 147
Query: 127 SQLGALELGRWIHSYMGKHRI--------------------------------DLNHIVG 154
S G + G +H+++ KH + +++ +
Sbjct: 148 SDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCW 207
Query: 155 GALINMYSRCGDIDKALQVFE--------------------------------EMKERDV 182
A+I+ Y R G+++ A ++FE EMKERD
Sbjct: 208 NAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDE 267
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL---------- 232
+++++I G G +EA+E+F +M + IRP K VL+AC++ G
Sbjct: 268 ISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTY 327
Query: 233 -------------------------VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
+DL +E+F+ M+ ++ + ++ L+ G
Sbjct: 328 AKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNK-----EVSSWNAMIGGLAMHG 382
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQI 307
R E+A D + M I P+ I +L+AC G +Q G I
Sbjct: 383 RAEDAIDLFSKMDINPNEITFVGVLNACAHGGLVQKGLTI 422
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 113/259 (43%), Gaps = 20/259 (7%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR IH + ++ + LV++Y KCG A ++F++M +V + MI
Sbjct: 320 QGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSN-KEVSSWNAMIGGL 378
Query: 61 VEHGLVENAFEVFSRVKVK-DTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVT 118
HG E+A ++FS++ + + + + +++ G + + L +F M+++ V P
Sbjct: 379 AMHGRAEDAIDLFSKMDINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEH 438
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI---DKALQVFE 175
C++ + G L + S + + V GAL+ + G++ ++ ++
Sbjct: 439 YGCIVDLLGRAGLLTEAEKVVSSI---PTEPTPAVWGALLGACRKHGNVELGERVGKILL 495
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
E++ ++ Y L A GR E E+ + M +GI+ T T ++DL
Sbjct: 496 ELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGT-----------SIIDL 544
Query: 236 GFEIFQSMTRDYGIEPQIE 254
G G PQ++
Sbjct: 545 GRGEVHKFIIGDGSHPQVK 563
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 222/466 (47%), Positives = 329/466 (70%), Gaps = 4/466 (0%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
+++ Y + GE + A +LF+ MP+ + + MI+ + G+VE A E F +K +D +
Sbjct: 211 MIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEIS 270
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W+AMIDG ++ G AL++F +MQ++ +RP + + VLSAC+ LGAL+ GRWIH+Y
Sbjct: 271 WSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAK 330
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
++ I L+ ++G +L++MY++CG ID A +VFE+M ++V+++N++I GLAMHGR+ +A++
Sbjct: 331 RNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAID 390
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
+F +M I P ++TFVGVLNAC+HGGLV G IF SM ++YG+EPQIEHYGCIVDLL
Sbjct: 391 LFSKM---DIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLL 447
Query: 264 SRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV 323
R G EA ++++ P + G+LL AC+ HG ++LGE++ K LL+ +SG Y
Sbjct: 448 GRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYT 507
Query: 324 LLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVN-NEIHEFILGDIRHPQREQIY 382
LLSN YA +G+W+E ++R MKE G++ PG S I++ E+H+FI+GD HPQ + IY
Sbjct: 508 LLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIY 567
Query: 383 KKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVV 442
+ + ++K+ +++EGY P VL DI++ EKE A+ HSE+LAI +GLI+T P TTIR+V
Sbjct: 568 QMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIV 627
Query: 443 KNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
KNLRVC DCHS KLI+ + R+IIVRDR R+HHF NG CSC D+W
Sbjct: 628 KNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 673
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 137/340 (40%), Gaps = 104/340 (30%)
Query: 67 ENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSAC 126
E++ VF V+ + W MI + N E +A+ L+ EM + RPN+ T VL AC
Sbjct: 89 ESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKAC 148
Query: 127 SQLGALELGRWIHSYMGKHRI--------------------------------DLNHIVG 154
S G + G +H+++ KH + +++ +
Sbjct: 149 SDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCW 208
Query: 155 GALINMYSRCGDIDKALQVFE--------------------------------EMKERDV 182
A+I+ Y R G+++ A ++FE EMKERD
Sbjct: 209 NAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDE 268
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL---------- 232
+++++I G G +EA+E+F +M + IRP K VL+AC++ G
Sbjct: 269 ISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTY 328
Query: 233 -------------------------VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
+DL +E+F+ M+ ++ + ++ L+ G
Sbjct: 329 AKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNK-----EVSSWNAMIGGLAMHG 383
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQI 307
R E+A D + M I P+ I +L+AC G +Q G I
Sbjct: 384 RAEDAIDLFSKMDIYPNEITFVGVLNACAHGGLVQKGLTI 423
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 118/260 (45%), Gaps = 22/260 (8%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR IH + ++ + LV++Y KCG A ++F++M +V + MI
Sbjct: 321 QGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSN-KEVSSWNAMIGGL 379
Query: 61 VEHGLVENAFEVFSRVKV-KDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVT 118
HG E+A ++FS++ + + + + +++ G + + L +F M+++ V P
Sbjct: 380 AMHGRAEDAIDLFSKMDIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEH 439
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI---DKALQVFE 175
C++ + G L + S + + V GAL+ + G++ ++ ++
Sbjct: 440 YGCIVDLLGRAGLLTEAEKVVSSI---PTEPTPAVWGALLGACRKHGNVELGERVGKILL 496
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
E++ ++ Y L A GR E E+ + M +GI+ T T ++DL
Sbjct: 497 ELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGT-----------SIIDL 545
Query: 236 G-FEIFQSMTRDYGIEPQIE 254
G E+ + + D G PQ++
Sbjct: 546 GRGEVHKFIIGD-GSHPQVK 564
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 228/487 (46%), Positives = 319/487 (65%), Gaps = 1/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G IH V KLG S S LV++Y CG + A +FD PEC D + +MI Y+
Sbjct: 155 GEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPEC-DGASWNIMIGGYL 213
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G+ ++A +F + +D V W+ MI+G V+ L LF++M + + PNE +V
Sbjct: 214 KCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVN 273
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
LSAC+ LGA+E G+WI YM + + L +G ALI+MYS+CG +++AL+VF +MKE++
Sbjct: 274 ALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKN 333
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++++I GLA++G+ +A+ +F +M QG++P +VTF+G+LNACSH LVD G F
Sbjct: 334 VLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFH 393
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SMT YG++P H+ C+VDL R G ++A I +M P+ + G+LL+AC+IHG
Sbjct: 394 SMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDT 453
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LGEQ+ KRLL+ G YVLLSN YA+ G+W ++R M+E V K PGCS I++
Sbjct: 454 ELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDL 513
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ IHEF+ GD HPQ E IY K+ E+ Q +K GY P T VL D+++ EKE AL HS
Sbjct: 514 GDTIHEFVAGDSSHPQLEMIYAKLGEMSQELKAAGYKPDTGQVLLDMDEEEKETALCHHS 573
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GLI T P TTIR+ KNLRVC DCHS KLI+ I R+IIVRDR RFHHF +G+
Sbjct: 574 EKLAIAFGLIKTDPGTTIRITKNLRVCADCHSATKLISKIYNREIIVRDRCRFHHFRDGS 633
Query: 482 CSCGDYW 488
CSC D+W
Sbjct: 634 CSCMDFW 640
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 121/287 (42%), Gaps = 38/287 (13%)
Query: 31 CGEFKDAMQLFDEMPEC----NDVVASTVM-INCYVEHGLVENAFEVFSRVKVKDTVCWT 85
C KD Q+ + ++ VAS ++ HG + A +F R++ D
Sbjct: 45 CKTLKDLTQIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRKPDIFIAN 104
Query: 86 AMIDGLVRNGEMARALDLFREMQRDNV-RPNEVTIVCVLSACSQLGALELGRWIHSYMGK 144
+I + A+ + EM +V P+ T +L ACS++ +L LG IHS++ K
Sbjct: 105 TLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFK 164
Query: 145 HRIDLNHIVGGALINMYSRCGDID-------------------------------KALQV 173
V L+ MY+ CG I+ A ++
Sbjct: 165 LGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRM 224
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV 233
FE M +RDV +++ +I G R E + +F++M+ + I P + V L+AC+H G +
Sbjct: 225 FEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAM 284
Query: 234 DLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
+ G I + M R + + ++D+ S+ G E A + MK
Sbjct: 285 EQGQWIERYMERK-NVRLTVRLGTALIDMYSKCGSVERALEVFHKMK 330
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 231/491 (47%), Positives = 331/491 (67%), Gaps = 4/491 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
E ++HG V+KLG S+ L+ +Y CGE A QLFD +PE D V+ +MI+ Y
Sbjct: 106 EALQVHGLVIKLGFGSDVFALNALLHVYALCGEIHCARQLFDNIPE-RDAVSWNIMIDGY 164
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++ G V+ A+ VF + +K+ V WT++I GLV G+ AL L EMQ + V I
Sbjct: 165 IKSGDVKTAYGVFLDMPLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGFELDGVAIA 224
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-- 178
+L+AC+ LGAL+ GRW+H Y+ + +D++ ++G AL+NMY +CGD+++AL VF ++K
Sbjct: 225 SLLTACANLGALDQGRWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEALSVFGKLKGN 284
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
++DV + ++I G A+HGR +EA+E F M +GIRP +TF VL ACS+GGLV+ G E
Sbjct: 285 QKDVYIWTAMIDGFAIHGRGVEALEWFNRMRREGIRPNSITFTAVLRACSYGGLVEEGKE 344
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
+F+SM Y + P IEHYGC+VDLL R GR +EA + I M + P ++ G+LL AC IH
Sbjct: 345 LFKSMKCFYNVNPSIEHYGCMVDLLGRSGRLDEAKELIKKMPMKPSAVIWGALLKACWIH 404
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
LG Q+ L++ S SG Y+ L+ A+ GKWKEA ++R KMK GV PG SS
Sbjct: 405 RDFLLGSQVGAHLVEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKSLGVPISPGKSS 464
Query: 359 IEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKL-EGYSPSTEVVLHDIEDWEKEWAL 417
+ +N +HEF+ G HPQ EQI K++++ + ++ EGY P+T+ +L D+E+ EKE A+
Sbjct: 465 VTLNGIVHEFLAGHQDHPQMEQIQLKLKQIAERLRQDEGYEPATKDLLLDLENEEKETAM 524
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
A HSE+LAI +GLI+TKP TTIRV+KNLR+C DCH++ KL++ I R+II+RDR RFHHF
Sbjct: 525 AQHSEKLAIAFGLINTKPGTTIRVIKNLRICRDCHTVAKLVSQIYSREIIMRDRVRFHHF 584
Query: 478 ENGTCSCGDYW 488
+G+CSC DYW
Sbjct: 585 RDGSCSCKDYW 595
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 144/364 (39%), Gaps = 69/364 (18%)
Query: 51 VASTVMINCYVEH-GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
+A+ + C H G + A VF+ + +T W A+I + E A +++M
Sbjct: 22 LATKFLTLCTSPHVGDLLYAQRVFNGITSPNTFMWNAIIRAYSNSDEPELAFLSYQQMLS 81
Query: 110 DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDK 169
+V N T +L AC L A+ +H + K + AL+++Y+ CG+I
Sbjct: 82 SSVPHNSYTFPFLLRACRNLLAMGEALQVHGLVIKLGFGSDVFALNALLHVYALCGEIHC 141
Query: 170 ALQVFEEMKERDVTTYN-------------------------------SLIAGLAMHGRS 198
A Q+F+ + ERD ++N SLI+GL G+S
Sbjct: 142 ARQLFDNIPERDAVSWNIMIDGYIKSGDVKTAYGVFLDMPLKNVVSWTSLISGLVEAGQS 201
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF--------------------- 237
+EA+ + EM N G V +L AC++ G +D G
Sbjct: 202 VEALSLCYEMQNAGFELDGVAIASLLTACANLGALDQGRWLHFYVLNNGVDVDRVIGCAL 261
Query: 238 -----------EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAP 283
E + G + + + ++D + GR EA ++ M+ I P
Sbjct: 262 VNMYVKCGDMEEALSVFGKLKGNQKDVYIWTAMIDGFAIHGRGVEALEWFNRMRREGIRP 321
Query: 284 DHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT--YVLLSNAYASSGKWKEAVQI 341
+ I ++L AC G ++ G+++ K + + + Y + + SG+ EA ++
Sbjct: 322 NSITFTAVLRACSYGGLVEEGKELFKSMKCFYNVNPSIEHYGCMVDLLGRSGRLDEAKEL 381
Query: 342 RAKM 345
KM
Sbjct: 382 IKKM 385
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 234/487 (48%), Positives = 328/487 (67%), Gaps = 1/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ IHG KLG SN + ++ LYG CGE DAM LF++MP+ D V ++I
Sbjct: 29 GKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAMLLFEKMPQ-RDAVTWNIVIAQLA 87
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G ++ A+ F R+ K+ WT+MI G V+ G+ A+DLF +++ + VRPNEVT+V
Sbjct: 88 KRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAIDLFMKLEDEAVRPNEVTVVS 147
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL+AC+ LG L+LGR +H Y K N V LI+MY +CG ++ A +VF EM+ER
Sbjct: 148 VLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLENARRVFYEMEERT 207
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +++++IAGLAMHG++ EA+ +F EMI G++P VTF+G+L+ACSH GL+D G F
Sbjct: 208 VVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFA 267
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SMT DYG+ PQIEHYGC+VDL SR G EEA++FI +M I P+ ++ G+LL CK+H +
Sbjct: 268 SMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALLGGCKVHKNI 327
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
L E+ K L + + G YV++SN YA + +W++A ++R MK+ GV+K G SSI V
Sbjct: 328 DLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWEDAARVRKLMKDRGVKKTSGWSSITV 387
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N +HEF+ GD HPQ E I K +L +K GY+P T VVL D+E+ EKE L HS
Sbjct: 388 NGVVHEFVAGDQTHPQAEDICKIWDKLLVKMKRRGYAPKTSVVLLDMEEKEKEKFLYRHS 447
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ +GL++T T IR++KNLRVC DCH+ +K+I+ I R+IIVRDRNRFH F +G
Sbjct: 448 EKLAVVFGLMTTPEGTPIRIMKNLRVCEDCHAALKIISGIVSREIIVRDRNRFHCFRDGQ 507
Query: 482 CSCGDYW 488
CSC D+W
Sbjct: 508 CSCRDFW 514
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 162/389 (41%), Gaps = 56/389 (14%)
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M+ +V P+ T VL AC +L + G+ IH K N + ++N+Y CG+
Sbjct: 1 MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGE 60
Query: 167 IDKALQVFEEMKERDVTTYN-------------------------------SLIAGLAMH 195
+ A+ +FE+M +RD T+N S+I+G
Sbjct: 61 MGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQC 120
Query: 196 GRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEH 255
G+ EA+++F ++ ++ +RP +VT V VL AC+ G +DLG I + G + +
Sbjct: 121 GKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLG-RIVHEYSTKSGFKRNVHV 179
Query: 256 YGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR 315
++D+ + G E A M+ + ++++ +HG+ + + ++
Sbjct: 180 CNTLIDMYVKCGCLENARRVFYEME-ERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLG 238
Query: 316 SADSG-TYVLLSNAYASSGKWKEAVQIRAKMK-EAGVQKEP---GC-----SSIEVNNEI 365
+G T++ L +A + G E + A M + GV + GC S + E
Sbjct: 239 VKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEA 298
Query: 366 HEFILGDIRHPQ-------------REQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE 412
HEFIL P + I + +K + +L+ + VV+ +I
Sbjct: 299 HEFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEA 358
Query: 413 KEWALAIHSERLAICYGLISTKPYTTIRV 441
+ W A +L G+ T +++I V
Sbjct: 359 ERWEDAARVRKLMKDRGVKKTSGWSSITV 387
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 223/519 (42%), Positives = 340/519 (65%), Gaps = 33/519 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR+IHG V+K G+ S+ + +++Y G +DA ++F +DVV MI+ Y
Sbjct: 150 EGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGE--SDVVCWNTMIDGY 207
Query: 61 VEHGLVENAFEVFSRVKVK-------------------------------DTVCWTAMID 89
++ G++E A +F+++ VK D + W++M+D
Sbjct: 208 LKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVD 267
Query: 90 GLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDL 149
G + G AL++F++MQR+ RP + VL+ACS +GA++ GRW+H+Y+ ++ I L
Sbjct: 268 GYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKL 327
Query: 150 NHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
+ ++G AL++MY++CG +D +VFEEMKER++ T+N++I GLA+HGR+ +A+E+F ++
Sbjct: 328 DAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQ 387
Query: 210 NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRP 269
++P +T VGVL AC+H G VD G IFQ+M YG++P++EHYGC+VDLL R G
Sbjct: 388 EGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLF 447
Query: 270 EEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAY 329
EA D I +M + P+ + G+LL AC+IHG L E++ K LL+ +SG YVLLSN Y
Sbjct: 448 SEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIY 507
Query: 330 ASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELK 389
A G++ + +IR MK G++ PG S +++N +HEF +GD HPQ ++IY+K++ +K
Sbjct: 508 AKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIK 567
Query: 390 QIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCN 449
+ +++ G+SP T VL DI++ EKE A+ HSE+LAI +GLI+T P I +VKNLRVC+
Sbjct: 568 ERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCD 627
Query: 450 DCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
DCHS KLI+ I R+IIVRDR R+HHF+NGTCSC D+W
Sbjct: 628 DCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 157/373 (42%), Gaps = 74/373 (19%)
Query: 49 DVVASTVMINCYVEHGL--VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
D S ++ CY + A +VFS + + W +I G + N ++ +A+ +
Sbjct: 64 DHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGR 123
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYS---- 162
M D RPN+ T + ACS A++ GR IH ++ KH I + + A I MY+
Sbjct: 124 MVID-ARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGR 182
Query: 163 --------------------------RCGDIDKALQVFEEMKERDVTTYNSLIAGLAM-- 194
+CG ++ A +F +M +++ ++N +I GLA
Sbjct: 183 LEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGG 242
Query: 195 -----------------------------HGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
GR EA+E+F++M + RP + VL
Sbjct: 243 NLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLA 302
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IA 282
ACS+ G +D G + + R+ I+ ++D+ ++ GR + ++ MK I
Sbjct: 303 ACSNIGAIDQGRWVHAYLKRN-SIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIF 361
Query: 283 PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG-TYVLLSNAYASSGKWKEAVQI 341
+ M+G L IHG+ + ++ +L + R +G T V + A A +G + ++I
Sbjct: 362 TWNAMIGGL----AIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRI 417
Query: 342 RAKMKE-AGVQKE 353
M+E GV E
Sbjct: 418 FQTMREFYGVDPE 430
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 223/519 (42%), Positives = 340/519 (65%), Gaps = 33/519 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR+IHG V+K G+ S+ + + +Y G +DA ++F +DVV MI+ Y
Sbjct: 150 EGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMF--YSGESDVVCWNTMIDGY 207
Query: 61 VEHGLVENAFEVFSRVKVK-------------------------------DTVCWTAMID 89
++ G++E A +F+++ VK D + W++M+D
Sbjct: 208 LKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVD 267
Query: 90 GLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDL 149
G + G AL++F++MQR+ RP + VL+ACS +GA++ GRW+H+Y+ ++ I L
Sbjct: 268 GYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKL 327
Query: 150 NHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
+ ++G AL++MY++CG +D +VFEEMKER++ T+N++I GLA+HGR+ +A+E+F ++
Sbjct: 328 DAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQ 387
Query: 210 NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRP 269
++P +T VGVL AC+H G VD G IFQ+M YG++P++EHYGC+VDLL R G
Sbjct: 388 EGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLF 447
Query: 270 EEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAY 329
EA D I +M + P+ + G+LL AC+IHG L E++ K LL+ +SG YVLLSN Y
Sbjct: 448 SEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIY 507
Query: 330 ASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELK 389
A G++ + +IR MK+ G++ PG S +++N +HEF +GD HPQ ++IY+K++ +K
Sbjct: 508 AKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIK 567
Query: 390 QIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCN 449
+ +++ G+SP T VL DI++ EKE A+ HSE+LAI +GLI+T P I +VKNLRVC+
Sbjct: 568 ERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCD 627
Query: 450 DCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
DCHS KLI+ I R+IIVRDR R+HHF+NGTCSC D+W
Sbjct: 628 DCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 174/416 (41%), Gaps = 90/416 (21%)
Query: 9 VLKLGLRSNRSTRLKLVELYG---KCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGL 65
VLKL + ++ L +L+G + G F+D S ++ CY
Sbjct: 34 VLKLFDSKSITSLQYLTQLHGLVLRSGHFQDHY-------------VSGALLKCYANPHF 80
Query: 66 --VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
+ A +VFS + + W +I G + N ++ +A+ + M D RPN+ T +
Sbjct: 81 SNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVID-ARPNKFTYPTLF 139
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYS--------------------- 162
ACS A++ GR IH ++ KH I + + A I+MY+
Sbjct: 140 KACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGESDVVC 199
Query: 163 ---------RCGDIDKALQVFEEMKERDVTTYNSLIAGLA-------------------- 193
+CG ++ A +F +M +++ ++N +I GLA
Sbjct: 200 WNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDE 259
Query: 194 -----------MHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
GR EA+E+F++M + RP + VL ACS+ G +D G +
Sbjct: 260 ISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAY 319
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHG 299
+ R+ I+ ++D+ ++ GR + ++ MK I + M+G L IHG
Sbjct: 320 LKRN-SIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGL----AIHG 374
Query: 300 KLQLGEQIAKRLLDCRSADSG-TYVLLSNAYASSGKWKEAVQIRAKMKE-AGVQKE 353
+ + ++ +L + R +G T V + A A +G + ++I M+E GV E
Sbjct: 375 RAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPE 430
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/491 (45%), Positives = 330/491 (67%), Gaps = 5/491 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H Q+L+ GL + + L+ +Y CG A Q+FDE+P+ D+ + +IN
Sbjct: 83 GRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQ-PDLPSWNSIINANF 141
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR---DNVRPNEVT 118
+ GLV+ A +F+ + ++ + W+ MI+G VR G+ AL LFREMQ ++VRPNE T
Sbjct: 142 QAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFT 201
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM- 177
+ VL+AC +LGALE G+W H+Y+ K + ++ ++G ALI+MY++CG ++KA VF +
Sbjct: 202 MSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLG 261
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
+DV ++++I+GLAMHG + E V +F +MINQG+RP VTF+ V AC HGGLV G
Sbjct: 262 PNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGK 321
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
+ + MT DY I P I+HYGC+VDL R GR +EA++ + +M + PD ++ G+LLS ++
Sbjct: 322 DYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRM 381
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
HG ++ E K+L++ +SG YVLLSN YA G+W++ +R M+ G++K PGCS
Sbjct: 382 HGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCS 441
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IEV +HEF +GD HP+ QI+ ++E+ + +K+EGY +T+ VL D+++ KE AL
Sbjct: 442 LIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLLDLDEEGKELAL 501
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
++HSE+LA+ YG + T P T IR+VKNLR+C DCH IK+I+ + R+IIVRD NRFHHF
Sbjct: 502 SLHSEKLALAYGFLKTSPGTPIRIVKNLRICRDCHVAIKMISKVFDREIIVRDCNRFHHF 561
Query: 478 ENGTCSCGDYW 488
G CSC DYW
Sbjct: 562 TQGLCSCRDYW 572
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 118/259 (45%), Gaps = 40/259 (15%)
Query: 80 DTVCWTAMIDGLVR-----NGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALEL 134
++ W +I V+ G + +F M+ V+P+ T +L + + L L
Sbjct: 23 ESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHL 82
Query: 135 GRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLI----- 189
GR +H+ + + + ++ V +LI+MYS CG++ A QVF+E+ + D+ ++NS+I
Sbjct: 83 GRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQ 142
Query: 190 AGLAMHGRSI--------------------------EAVEMFREMINQG---IRPTKVTF 220
AGL R++ EA+ +FREM G +RP + T
Sbjct: 143 AGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTM 202
Query: 221 VGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
GVL AC G ++ G + + G+ + ++D+ ++ G E+A +N+
Sbjct: 203 SGVLAACGRLGALEHG-KWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLG 261
Query: 281 IAPDHIMLGSLLSACKIHG 299
D + +++S +HG
Sbjct: 262 PNKDVMAWSAMISGLAMHG 280
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 216/436 (49%), Positives = 311/436 (71%), Gaps = 1/436 (0%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
+I+ Y + G ++ A ++F + KD + W MI G AL LFR+MQ+ NV
Sbjct: 303 NALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVE 362
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDL-NHIVGGALINMYSRCGDIDKALQ 172
PN+VT V +L AC+ LGAL+LG+WIH+Y+ K + L N + +LI+MY++CG+I+ A Q
Sbjct: 363 PNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQ 422
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
VF MK + + ++N++I+GLAMHG + A+E+FR+M ++G P +TFVGVL+ACSH GL
Sbjct: 423 VFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGL 482
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
V+LG + F SM DY I P+++HYGC++DLL R G +EA + NM++ PD + GSLL
Sbjct: 483 VELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLL 542
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
AC++HG ++LGE AK L + + G YVLLSN YA++G+W + +IR K+ + G++K
Sbjct: 543 GACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKK 602
Query: 353 EPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE 412
PGCSSIEV++ +HEF++GD H Q + IYK + E+ Q+++ G+ P T VL+D+++
Sbjct: 603 VPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSEVLYDMDEEW 662
Query: 413 KEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRN 472
KE +L+ HSE+LAI +GLISTKP TTIR+VKNLRVC +CHS IKLI+ I R+II RDRN
Sbjct: 663 KEGSLSHHSEKLAIAFGLISTKPETTIRIVKNLRVCGNCHSAIKLISKIFNREIIARDRN 722
Query: 473 RFHHFENGTCSCGDYW 488
RFHHF++G+CSC DYW
Sbjct: 723 RFHHFKDGSCSCMDYW 738
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/349 (34%), Positives = 193/349 (55%), Gaps = 5/349 (1%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG++IHG VLKLGL S+ L+ +Y + GE A +F + D V+ T +I Y
Sbjct: 150 EGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSK-SSLRDAVSFTALITGY 208
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G +++A +F + V+D V W AMI G ++G AL F+EM+R NV PNE T+V
Sbjct: 209 TLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMV 268
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSAC+Q G+LELG W+ S++ H + N + ALI+MYS+CGD+DKA +FE + E+
Sbjct: 269 TVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEK 328
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D+ ++N +I G + EA+ +FR+M + P VTFV +L AC++ G +DLG I
Sbjct: 329 DIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIH 388
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI-MLGSLLSACKIHG 299
+ + + + ++D+ ++ G E A MK P + +++S +HG
Sbjct: 389 AYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMK--PKSLGSWNAMISGLAMHG 446
Query: 300 KLQLGEQIAKRLLD-CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+ ++ +++ D D T+V + +A + +G + Q + M E
Sbjct: 447 HANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVE 495
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 169/415 (40%), Gaps = 106/415 (25%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVEL--YGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
++IH Q++K GL + + KL+E G A+ LF+ + + N +
Sbjct: 49 KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFI--------- 99
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
W MI G + A+D + M V PN T
Sbjct: 100 -----------------------WNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFP 136
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD-------------- 166
+L +C+++GA + G+ IH ++ K ++ + V +LINMY++ G+
Sbjct: 137 FLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLR 196
Query: 167 -----------------IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
+D A ++FEE+ RD ++N++IAG A GR EA+ F+EM
Sbjct: 197 DAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMK 256
Query: 210 NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRP 269
+ P + T V VL+AC+ G ++LG + +S D+G+ + ++D+ S+ G
Sbjct: 257 RANVAPNESTMVTVLSACAQSGSLELGNWV-RSWIEDHGLGSNLRLVNALIDMYSKCGDL 315
Query: 270 EEAYDFITNM----------------------------------KIAPDHIMLGSLLSAC 295
++A D + + P+ + S+L AC
Sbjct: 316 DKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPAC 375
Query: 296 KIHGKLQLGE----QIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
G L LG+ I K+ L ++ + L + YA G + A Q+ A MK
Sbjct: 376 AYLGALDLGKWIHAYIDKKFLGL--TNTSLWTSLIDMYAKCGNIEAAKQVFAGMK 428
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 238/550 (43%), Positives = 328/550 (59%), Gaps = 64/550 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G H Q++K+G + + L++ Y K G+ K A ++F MP DVVA+ MI+
Sbjct: 29 GEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRVFMGMPR-RDVVANNAMISALS 87
Query: 62 EHGLVENAFEVFSRV-------------------------------KVKDTVCWTAMIDG 90
+HG VE A +F + VKD V W A+IDG
Sbjct: 88 KHGYVEEARNLFDNMTERNSCSWNSMITCYCKLGDINSARLMFDCNPVKDVVSWNAIIDG 147
Query: 91 L--------------------------------VRNGEMARALDLFREMQRDNVRPNEVT 118
V+ GE A+ +F++MQ +NV+P EVT
Sbjct: 148 YCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVT 207
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
+V +LSAC+ LGAL++G WIH Y+ R+ ++ ++G ALI+MY +CG ++ A+ VF +
Sbjct: 208 MVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLS 267
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
+++ +NS+I GL M+GR EA+ F M +GI+P VTFVG+L+ CSH GL+ G
Sbjct: 268 RKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQR 327
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
F M YG+EP +EHYGC+VDLL R G +EA + I M + P+ ++LGSLL AC+IH
Sbjct: 328 YFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIH 387
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
+LGEQ+ ++LL+ D G YV LSN YAS +W + R M + GV K PGCSS
Sbjct: 388 KDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSS 447
Query: 359 IEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALA 418
IEVNN +HEF+ GD HPQ QI + E+ + +K +G+ P+T VLHDIE+ EKE A+
Sbjct: 448 IEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVPNTANVLHDIEEEEKEGAIR 507
Query: 419 IHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFE 478
HSER+A+ +GL+ST P TIRVVKNLR C+DCHS +KLI+N KR+IIVRDR RFHHF
Sbjct: 508 YHSERIAVAFGLMSTPPGKTIRVVKNLRTCSDCHSAMKLISNAFKREIIVRDRKRFHHFR 567
Query: 479 NGTCSCGDYW 488
NG+CSC DYW
Sbjct: 568 NGSCSCNDYW 577
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 106/265 (40%), Gaps = 33/265 (12%)
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M R++V P++ + +L +C+ G +LG H + K + + I+ L++ Y++ GD
Sbjct: 1 MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-------------- 212
+ A +VF M RDV N++I+ L+ HG EA +F M +
Sbjct: 61 LKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCKL 120
Query: 213 --IRPTKVTF-------VGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
I ++ F V NA G Q + G + ++
Sbjct: 121 GDINSARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAY 180
Query: 264 SRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG 320
+ G A M+ + P + + SLLSAC G L +GE I + R+
Sbjct: 181 VQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYI---RTKRLK 237
Query: 321 TYVLLSNA----YASSGKWKEAVQI 341
V+L NA Y G + A+ +
Sbjct: 238 IDVVLGNALIDMYCKCGALEAAIDV 262
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 223/492 (45%), Positives = 327/492 (66%), Gaps = 9/492 (1%)
Query: 2 GREIHGQVLKLGLRSNR-----STRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVM 56
G+ +H V++ SN T L+++Y KCG A QLF+ + + VV+ T M
Sbjct: 244 GKAMHAYVIR---NSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQ-KTVVSWTAM 299
Query: 57 INCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
I + +E A +F + +D + WTAM+ + + +A +LF +M+ VRP +
Sbjct: 300 IAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTK 359
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
VTIV +LS C+ GAL+LG+W+HSY+ K R++++ I+ AL++MY++CGDI+ A ++F E
Sbjct: 360 VTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIE 419
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
RD+ +N++I G AMHG EA+++F EM QG++P +TF+G+L+ACSH GLV G
Sbjct: 420 AISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEG 479
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
++F+ M +G+ PQIEHYGC+VDLL R G +EA++ I +M I P+ I+ G+L++AC+
Sbjct: 480 KKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACR 539
Query: 297 IHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGC 356
+H QLGE A +LL+ + G VL+SN YA++ +W +A +R MK G++KEPG
Sbjct: 540 LHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGH 599
Query: 357 SSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWA 416
S IEVN +HEF++GD HPQ +I + + E+++ + GY P T VL +I++ EKE A
Sbjct: 600 SVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETA 659
Query: 417 LAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHH 476
L HSE+LA+ +GLIST P T IR+VKNLRVCNDCH+ KL++ I R IIVRDRNRFHH
Sbjct: 660 LTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHH 719
Query: 477 FENGTCSCGDYW 488
F G CSCGDYW
Sbjct: 720 FREGYCSCGDYW 731
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 156/377 (41%), Gaps = 98/377 (25%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIHG VLK GL + L+ +YG+C
Sbjct: 143 GKEIHGFVLKKGLDRDVFVGNALMLMYGECA----------------------------- 173
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
VE A VF ++ +D V W+ MI L RN E AL+L REM VRP+EV +V
Sbjct: 174 ---CVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVS 230
Query: 122 VLSACSQLGALELGRWIHSYMGKHRID--LNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+++ + + +G+ +H+Y+ ++ + + AL++MY++CG + A Q+F + +
Sbjct: 231 MVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQ 290
Query: 180 RDVTTYNSLIAGLAMHGRSIE-------------------------------AVEMFREM 208
+ V ++ ++IAG R E A +F +M
Sbjct: 291 KTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQM 350
Query: 209 INQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDY--------------------- 247
G+RPTKVT V +L+ C+ G +DLG + + ++
Sbjct: 351 RTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDI 410
Query: 248 ---------GIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSAC 295
I I + I+ + G EEA D M+ + P+ I LL AC
Sbjct: 411 NAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHAC 470
Query: 296 KIHGKLQLGEQIAKRLL 312
G + G+++ ++++
Sbjct: 471 SHAGLVTEGKKLFEKMV 487
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 137/273 (50%), Gaps = 13/273 (4%)
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W +I + + AL+++ ++++ + + VL AC Q+ +LG+ IH ++
Sbjct: 92 WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 151
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
K +D + VG AL+ MY C ++ A VF++M ERDV +++++I L+ + A+E
Sbjct: 152 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALE 211
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQ-IEHYGCIVDL 262
+ REM +RP++V V ++N + + +G + + R+ E + ++D+
Sbjct: 212 LIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDM 271
Query: 263 LSR---VGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD-CRSAD 318
++ +G + ++ +T + + ++++ C +L+ A+ L D ++ D
Sbjct: 272 YAKCGHLGLARQLFNGLTQKTV----VSWTAMIAGCIRSNRLEE----ARALFDSTQNRD 323
Query: 319 SGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
+ + +AYA + +A + +M+ +GV+
Sbjct: 324 VMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVR 356
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 214/487 (43%), Positives = 323/487 (66%), Gaps = 1/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H V + SN ++++Y CGE A+ +F M D+++ T +++ +
Sbjct: 238 GKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNN-RDIISWTTIVSGFT 296
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G ++ A F ++ KD V WTAMIDG +R+ AL+LFR MQ NV+P+E T+V
Sbjct: 297 NLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVS 356
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL+AC+ LGALELG WI +Y+ +++I + V ALI+MY +CGD+DKA +F EM +RD
Sbjct: 357 VLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRD 416
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
T+ ++I GLA++G +A++MF M+ I P ++T++GVL+AC+H GLVD G + F
Sbjct: 417 KFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFL 476
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
MT +GIEP I HYGC+VDLL+R GR +EAY+ I NM I + I+ G+LL+ C+++ +
Sbjct: 477 RMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRES 536
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+ E + K++L+ + YVLL N YA+ +W + ++R M + G++K PGCS IE+
Sbjct: 537 DMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEM 596
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N +HEF+ GD HPQ + I K+ ++ Q +KL GYSP V DI + +KE ++ HS
Sbjct: 597 NGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHS 656
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GLI++ P TIR+ KNLR+C DCH+M KL++ + R++IVRDR RFHHF++G
Sbjct: 657 EKLAIAFGLINSPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGL 716
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 717 CSCKDYW 723
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 123/481 (25%), Positives = 200/481 (41%), Gaps = 114/481 (23%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++HG VLK GL+ N LV++Y CG+
Sbjct: 137 GRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQ---------------------------- 168
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ A VF D + W +I + G+ + LF M+ V P VT+V
Sbjct: 169 ----LDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVL 224
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLSACS+L L G+ +HSY+ +++ N ++ A+I+MY+ CG++D AL +F M RD
Sbjct: 225 VLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRD 284
Query: 182 VTTYNSLIAGLAMHG-------------------------------RSIEAVEMFREMIN 210
+ ++ ++++G G R EA+E+FR M
Sbjct: 285 IISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQA 344
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDL-------- 262
++P + T V VL AC+H G ++LG I + R+ I+ + ++D+
Sbjct: 345 TNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRN-KIKNDLFVRNALIDMYFKCGDVD 403
Query: 263 -----------------------LSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACK 296
L+ G E+A D +NM I PD I +LSAC
Sbjct: 404 KAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACT 463
Query: 297 IHGKLQLGEQIAKRLLDCRSADSGT--YVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
G + G + R+ + Y L + A +G+ KEA ++ M
Sbjct: 464 HTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENM--------- 514
Query: 355 GCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKE 414
I+ N+ + +L R RE +M +KQI++LE + + V+L +I K
Sbjct: 515 ---PIKANSIVWGALLAGCR-VYRESDMAEMV-VKQILELEPDNGAVYVLLCNIYAACKR 569
Query: 415 W 415
W
Sbjct: 570 W 570
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 161/355 (45%), Gaps = 43/355 (12%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVEL--YGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+++H Q +K GL +N + +++ + G+F+ A +LFDE+PE N +
Sbjct: 35 QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFI--------- 85
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
W MI G R + L+ EM R V+P+ T
Sbjct: 86 -----------------------WNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFP 122
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+ ++ ALE GR +H ++ KH + N V AL+ MY CG +D A VF+ +
Sbjct: 123 FLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKA 182
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV T+N +I+ G+ E+ +F M ++ + PT VT V VL+ACS + G ++
Sbjct: 183 DVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKV- 241
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
S ++ +E + ++D+ + G + A +M D I +++S G
Sbjct: 242 HSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMN-NRDIISWTTIVS-----GF 295
Query: 301 LQLGE-QIAKRLLD-CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
LGE +A+ D D ++ + + Y S ++KEA+++ M+ V+ +
Sbjct: 296 TNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPD 350
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/484 (45%), Positives = 323/484 (66%), Gaps = 6/484 (1%)
Query: 11 KLGLRSNRSTRLKLVELYGKCGEFKD------AMQLFDEMPECNDVVASTVMINCYVEHG 64
++ + S + + LV + C +D + DE V ++ +++ Y + G
Sbjct: 228 RMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCG 287
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
A ++F+++ K+ CW MI+G V + + AL LF EMQ V+ ++VT+ +L
Sbjct: 288 CYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLI 347
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
AC+ LGALELG+W+H Y+ K +I+++ +G AL++MY++CG I+ A++VF+EM E+DV T
Sbjct: 348 ACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMT 407
Query: 185 YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT 244
+ +LI GLAM G+ ++A+E+F EM ++P +TFVGVL ACSH GLV+ G F SM
Sbjct: 408 WTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMP 467
Query: 245 RDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLG 304
YGI+P IEHYGC+VD+L R GR EA D I NM +APD+ +L LLSAC+IHG L +
Sbjct: 468 NKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVA 527
Query: 305 EQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNE 364
E+ A++L++ + GTYVLLSN Y+S W+ A ++R M E ++K PGCS+IEV
Sbjct: 528 ERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGV 587
Query: 365 IHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERL 424
+HEF+ GD+ HPQ +IY+ + ++ + +K GY P VL D+++ EKE L++HSE+L
Sbjct: 588 VHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKENELSLHSEKL 647
Query: 425 AICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSC 484
AI +GL+ST P T IRVVKNLRVC+DCHS +K I+ + R+IIVRDRNRFHHF G+CSC
Sbjct: 648 AIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSC 707
Query: 485 GDYW 488
D+W
Sbjct: 708 RDFW 711
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 145/297 (48%), Gaps = 13/297 (4%)
Query: 21 RLKLVELYGKCGEFKDAMQLF---DEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVK 77
R L+ CG + QL ++ +D ++N Y G + +A +VF ++
Sbjct: 140 RFTFPSLFKSCGVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMV 199
Query: 78 VKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRW 137
K V W MI + A+ LFR M+ +V+PNE+T+V VL+AC++ LE +
Sbjct: 200 NKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQ 259
Query: 138 IHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR 197
+H Y+ + I + ++ AL+++Y +CG A +F +M E+++ +N +I G
Sbjct: 260 VHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSD 319
Query: 198 SIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYG 257
EA+ +F EM G++ KVT +L AC+H G ++LG + + ++ IE +
Sbjct: 320 YEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKE-KIEVDVALGT 378
Query: 258 CIVDLLSRVGRPEEAY---------DFITNMKIAPDHIMLGSLLSACKIHGKLQLGE 305
+VD+ ++ G E A D +T + M G L A ++ ++Q+ E
Sbjct: 379 ALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSE 435
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 34/210 (16%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H + K + + + LV++Y KCG + AM++F EMPE
Sbjct: 358 GKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPE--------------- 402
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
KD + WTA+I GL G+ +AL+LF EMQ V+P+ +T V
Sbjct: 403 -----------------KDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVG 445
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VL+ACS G + G + +S K+ I + G +++M R G I +A + + M
Sbjct: 446 VLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMA 505
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
D L++ +HG + A +++I
Sbjct: 506 PDYFVLVGLLSACRIHGNLVVAERAAQQLI 535
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 92/237 (38%), Gaps = 41/237 (17%)
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL 224
G + A VF ++ T NS+I G +A+ ++ M+ QG+ P + TF +
Sbjct: 88 GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLF 147
Query: 225 NACS--------HGGLVDLGF-------EIFQSMTRDYG------------IEPQIEHYG 257
+C H LGF +M + G + + +
Sbjct: 148 KSCGVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWA 207
Query: 258 CIVDLLSRVGRPEEAYDFITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC 314
++ ++ P EA M+IA P+ I L ++L+AC L+ +Q+ K +
Sbjct: 208 TMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYI--- 264
Query: 315 RSADSGTYVLLSNA----YASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHE 367
G + +L++A Y G + A + KM E K C +I +N + +
Sbjct: 265 DETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPE----KNLFCWNIMINGHVED 317
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 234/489 (47%), Positives = 319/489 (65%), Gaps = 3/489 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++ + + + N + ++++Y KCG +DA +LFD M E D V T M++ Y
Sbjct: 251 GRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEE-KDNVTWTTMLDGYA 309
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ-RDNVRPNEVTIV 120
E A EV + + KD V W A+I +NG+ AL +F E+Q + N++ N++T+V
Sbjct: 310 ISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLV 369
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
LSAC+Q+GALELGRWIHSY+ KH I +N V ALI+MYS+CGD++K+ +VF +++R
Sbjct: 370 STLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKR 429
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++++I GLAMHG EAV+MF +M ++P VTF V ACSH GLVD +F
Sbjct: 430 DVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLF 489
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
M +YGI P+ +HY CIVD+L R G E+A FI M I P + G+LL ACKIH
Sbjct: 490 HQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHAN 549
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
L L E RLL+ + G +VLLSN YA GKW+ ++R M+ G++KEPGCSSIE
Sbjct: 550 LNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIE 609
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE-KEWALAI 419
++ IHEF+ GD HP E++Y K+ E+ + +K GY P VL IE+ E KE +L +
Sbjct: 610 IDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNL 669
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAICYGLIST+ IRV+KNLRVC DCHS+ KLI+ + R+IIVRDR RFHHF N
Sbjct: 670 HSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRN 729
Query: 480 GTCSCGDYW 488
G CSC D+W
Sbjct: 730 GQCSCNDFW 738
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 159/284 (55%), Gaps = 34/284 (11%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+DV + +I+CY G +++A +VF+ +K KD V W +MI+G V+ G +AL+LF++M
Sbjct: 164 SDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKM 223
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ ++V+ + VT+V VLSAC+++ LE GR + SY+ ++R+++N + A+++MY++CG I
Sbjct: 224 ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSI 283
Query: 168 DKALQVFEEMKE-------------------------------RDVTTYNSLIAGLAMHG 196
+ A ++F+ M+E +D+ +N+LI+ +G
Sbjct: 284 EDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNG 343
Query: 197 RSIEAVEMFREM-INQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEH 255
+ EA+ +F E+ + + ++ ++T V L+AC+ G ++LG I S + +GI
Sbjct: 344 KPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWI-HSYIKKHGIRMNFHV 402
Query: 256 YGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
++ + S+ G E++ + +++ D + +++ +HG
Sbjct: 403 TSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHG 445
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 140/288 (48%), Gaps = 12/288 (4%)
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPNEVTIVCVLS 124
+E A +VF + ++ W +I + ++ F +M PN+ T ++
Sbjct: 80 LEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIK 139
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
A +++ +L LG+ +H K + + V +LI+ Y CGD+D A +VF +KE+DV +
Sbjct: 140 AAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVS 199
Query: 185 YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT 244
+NS+I G G +A+E+F++M ++ ++ + VT VGVL+AC+ ++ G ++ S
Sbjct: 200 WNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVC-SYI 258
Query: 245 RDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLG 304
+ + + ++D+ ++ G E+A M+ D++ ++L I +
Sbjct: 259 EENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLDGYAISEDYEAA 317
Query: 305 EQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEA------VQIRAKMK 346
++ + D + L +AY +GK EA +Q++ MK
Sbjct: 318 REVLNSM---PQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMK 362
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 214/487 (43%), Positives = 323/487 (66%), Gaps = 1/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H V + SN ++++Y CGE A+ +F M D+++ T +++ +
Sbjct: 259 GKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNN-RDIISWTTIVSGFT 317
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G ++ A F ++ KD V WTAMIDG +R+ AL+LFR MQ NV+P+E T+V
Sbjct: 318 NLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVS 377
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL+AC+ LGALELG WI +Y+ +++I + V ALI+MY +CGD+DKA +F EM +RD
Sbjct: 378 VLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRD 437
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
T+ ++I GLA++G +A++MF M+ I P ++T++GVL+AC+H GLVD G + F
Sbjct: 438 KFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFL 497
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
MT +GIEP I HYGC+VDLL+R GR +EAY+ I NM I + I+ G+LL+ C+++ +
Sbjct: 498 RMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRES 557
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+ E + K++L+ + YVLL N YA+ +W + ++R M + G++K PGCS IE+
Sbjct: 558 DMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEM 617
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N +HEF+ GD HPQ + I K+ ++ Q +KL GYSP V DI + +KE ++ HS
Sbjct: 618 NGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHS 677
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GLI++ P TIR+ KNLR+C DCH+M KL++ + R++IVRDR RFHHF++G
Sbjct: 678 EKLAIAFGLINSPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGL 737
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 738 CSCKDYW 744
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 123/481 (25%), Positives = 200/481 (41%), Gaps = 114/481 (23%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++HG VLK GL+ N LV++Y CG+
Sbjct: 158 GRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQ---------------------------- 189
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ A VF D + W +I + G+ + LF M+ V P VT+V
Sbjct: 190 ----LDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVL 245
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLSACS+L L G+ +HSY+ +++ N ++ A+I+MY+ CG++D AL +F M RD
Sbjct: 246 VLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRD 305
Query: 182 VTTYNSLIAGLAMHG-------------------------------RSIEAVEMFREMIN 210
+ ++ ++++G G R EA+E+FR M
Sbjct: 306 IISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQA 365
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDL-------- 262
++P + T V VL AC+H G ++LG I + R+ I+ + ++D+
Sbjct: 366 TNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRN-KIKNDLFVRNALIDMYFKCGDVD 424
Query: 263 -----------------------LSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACK 296
L+ G E+A D +NM I PD I +LSAC
Sbjct: 425 KAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACT 484
Query: 297 IHGKLQLGEQIAKRLLDCRSADSGT--YVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
G + G + R+ + Y L + A +G+ KEA ++ M
Sbjct: 485 HTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENM--------- 535
Query: 355 GCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKE 414
I+ N+ + +L R RE +M +KQI++LE + + V+L +I K
Sbjct: 536 ---PIKANSIVWGALLAGCR-VYRESDMAEMV-VKQILELEPDNGAVYVLLCNIYAACKR 590
Query: 415 W 415
W
Sbjct: 591 W 591
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 161/355 (45%), Gaps = 43/355 (12%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVEL--YGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+++H Q +K GL +N + +++ + G+F+ A +LFDE+PE N +
Sbjct: 56 QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFI--------- 106
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
W MI G R + L+ EM R V+P+ T
Sbjct: 107 -----------------------WNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFP 143
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+ ++ ALE GR +H ++ KH + N V AL+ MY CG +D A VF+ +
Sbjct: 144 FLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKA 203
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV T+N +I+ G+ E+ +F M ++ + PT VT V VL+ACS + G ++
Sbjct: 204 DVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKV- 262
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
S ++ +E + ++D+ + G + A +M D I +++S G
Sbjct: 263 HSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMN-NRDIISWTTIVS-----GF 316
Query: 301 LQLGE-QIAKRLLD-CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
LGE +A+ D D ++ + + Y S ++KEA+++ M+ V+ +
Sbjct: 317 TNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPD 371
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 216/487 (44%), Positives = 320/487 (65%), Gaps = 1/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H V L + R L+++Y CG+ A+ +FD M + DV++ T ++ +
Sbjct: 239 GKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNM-KSRDVISWTAIVTGFT 297
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G V A F ++ +D V WTAMIDG ++ L LFREMQ N++P+E T+V
Sbjct: 298 NLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVS 357
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+AC+ LGALELG WI +Y+ K+ I ++ VG ALI+MY CG+++KA+++F M RD
Sbjct: 358 ILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRD 417
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
++ ++I GLA++G EA++MF +M+ I P +VT +GVL AC+H G+VD G + F
Sbjct: 418 KISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFA 477
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
MT +GIEP + HYGC+VDLL R G +EA++ I NM + P+ I+ GSLL AC++H
Sbjct: 478 RMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDE 537
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++ E A+++L+ + YVLL N YA+ +W++ ++R M + G++K PGCS IE+
Sbjct: 538 EMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEM 597
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N +HEF+ GD HPQ ++IY K+ E+ +K GYSP T V DI + EKE A+ HS
Sbjct: 598 NGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGEEEKESAVYRHS 657
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GLIS+ P TIR+VKNLR+C DCH + KL++ + R++IVRDR RFHHF +G+
Sbjct: 658 EKLAIAFGLISSGPGVTIRIVKNLRMCVDCHYVAKLVSKVYNREVIVRDRTRFHHFRHGS 717
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 718 CSCKDYW 724
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/487 (25%), Positives = 197/487 (40%), Gaps = 126/487 (25%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GRE+H ++KLG SN + L+ LY GE
Sbjct: 138 GRELHDHIVKLGFSSNVFVQNALIHLYSLSGE---------------------------- 169
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
V A VF R D V W MI G R+ + ++ LF EM+R V P+ +T+V
Sbjct: 170 ----VSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVS 225
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLSACS+L L +G+ +H Y+ +I+ ++ ALI+MY+ CGD+D AL +F+ MK RD
Sbjct: 226 VLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRD 285
Query: 182 VTTYNSLIAGLAMHG-------------------------------RSIEAVEMFREMIN 210
V ++ +++ G G R E + +FREM
Sbjct: 286 VISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQA 345
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLG---------------------------------- 236
I+P + T V +L AC+H G ++LG
Sbjct: 346 ANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEK 405
Query: 237 -FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLL 292
IF +M I +G ++ G EEA D + M I PD + +L
Sbjct: 406 AIRIFNAMPHRDKISWTAVIFGLAIN-----GYGEEALDMFSQMLKASITPDEVTCIGVL 460
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGT--YVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
AC G + G++ R+ + Y + + +G KEA ++ M
Sbjct: 461 CACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNM----- 515
Query: 351 QKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI-- 408
++ N+ + +LG R + E++ + +QI++LE + + V+L +I
Sbjct: 516 -------PVKPNSIVWGSLLGACRVHRDEEMAE--MAAQQILELEPENGAVYVLLCNIYA 566
Query: 409 --EDWEK 413
WEK
Sbjct: 567 ACNRWEK 573
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 146/304 (48%), Gaps = 5/304 (1%)
Query: 50 VVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
V A + C E G +E A VF + + W MI G R G A+ ++ EM
Sbjct: 53 VPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLE 112
Query: 110 DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDK 169
V P+E T +L ++ A++ GR +H ++ K N V ALI++YS G++
Sbjct: 113 RGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSV 172
Query: 170 ALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH 229
A VF+ + DV T+N +I+G + E++++F EM + P+ +T V VL+ACS
Sbjct: 173 ARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSK 232
Query: 230 GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLG 289
+++G + + +D IEP ++D+ + G + A NMK + D I
Sbjct: 233 LKDLNVGKRVHR-YVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMK-SRDVISWT 290
Query: 290 SLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
++++ G++ L ++ + D ++ + + Y ++KE + + +M+ A
Sbjct: 291 AIVTGFTNLGQVGLARNYFDKMPE---RDFVSWTAMIDGYLQVNRFKEVLSLFREMQAAN 347
Query: 350 VQKE 353
++ +
Sbjct: 348 IKPD 351
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/518 (44%), Positives = 331/518 (63%), Gaps = 32/518 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGK------------------------------- 30
G+++H QVLK+GL S+ L+E+Y K
Sbjct: 124 GQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVR 183
Query: 31 CGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDG 90
GE A LFD MPE D+V+ MI+ + G V A ++F R +D + W++MI
Sbjct: 184 VGEINLAHDLFDRMPE-RDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAA 242
Query: 91 LVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLN 150
+ + AL LF EMQ NV P++VT+V VLSAC +GAL +G+ IH + ++RI+++
Sbjct: 243 YAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEID 302
Query: 151 HIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
+G +L++MY++CGDID +L+VF M RDV ++++I GLA HG A++ F +MI+
Sbjct: 303 LKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMIS 362
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
+ I+P VTF+GVL+ACSH GLVD G+ F SM++ Y + P+IEHYGC+VD+L R GR +
Sbjct: 363 EDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQ 422
Query: 271 EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYA 330
EA + I +M APD I+ +LL AC+I+ +++ E+ LL+ G YVLLSN Y+
Sbjct: 423 EAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYS 482
Query: 331 SSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQ 390
+ +W + V +R MK +QK PG SSIEV+N +HEF+ GD HP+ ++I + + E+
Sbjct: 483 QAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRMLSEITA 542
Query: 391 IVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCND 450
+K GY+P T VL D ++ EKE ALA HSE+LAI +GL+ST P +TIR+VKNLRVC+D
Sbjct: 543 RLKANGYAPLTASVLQDFDEKEKENALAHHSEKLAIAFGLLSTAPGSTIRIVKNLRVCDD 602
Query: 451 CHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
CH IKLI+ KR+IIVRDRNRFHHF NG+CSC DYW
Sbjct: 603 CHIAIKLISRTYKRRIIVRDRNRFHHFVNGSCSCKDYW 640
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 109/245 (44%), Gaps = 17/245 (6%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP-NEVTIVCVLSACS 127
A VF + DT W MI + + ++ LF +M+ P + ++ V+ AC
Sbjct: 57 ARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACG 116
Query: 128 QLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNS 187
+L G+ +H+ + K + + V ALI MY++ GDI+ A + +EM D+ YN
Sbjct: 117 RLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNV 176
Query: 188 LIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF--EIFQSMTR 245
L+A G A ++F M + + G H L D+G ++F
Sbjct: 177 LLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHG------HASLGDVGTAKKLF----- 225
Query: 246 DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIA---PDHIMLGSLLSACKIHGKLQ 302
D E + + ++ ++ + EA M++A PD + + S+LSAC G L
Sbjct: 226 DRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALG 285
Query: 303 LGEQI 307
+G+ I
Sbjct: 286 MGKMI 290
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 221/487 (45%), Positives = 320/487 (65%), Gaps = 1/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++HG+V+ G+ + LV++Y +C + A ++FD M + VV+ T +++
Sbjct: 142 GMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGM-QVRSVVSWTSLLSGLA 200
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G V+ A ++F R+ +DTV WTAMIDG V AL++FREMQ NV +E T+V
Sbjct: 201 RLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVS 260
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V++AC+QLGALE+G W+ YM + I ++ VG ALI+MYS+CG I++AL VF+ M RD
Sbjct: 261 VITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRD 320
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
T+ ++I GLA++G EA+EMF MI P +VTF+GVL AC+H GLVD G E F
Sbjct: 321 KFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFL 380
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM Y I P + HYGCI+DLL R G+ EA D I M + P+ + G+LL+AC++HG
Sbjct: 381 SMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNS 440
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++GE +A+RLL+ +S Y+LLSN YA +W++ ++R + E G++KEPGCS IE+
Sbjct: 441 EIGELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKKEPGCSLIEM 500
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ IHEF+ GD HP ++IY K++ + + GY P V ++ + EK+ L HS
Sbjct: 501 DGIIHEFVAGDQSHPMSKEIYSKLESIISDLNNVGYFPDVTEVFVEVAEKEKKKVLYWHS 560
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI + L+S+KP T IR+VKNLR+C DCH+ IKLI+ + R+++VRDR RFHHF +G
Sbjct: 561 EKLAIAFALLSSKPNTVIRIVKNLRMCLDCHNAIKLISRLYGREVVVRDRTRFHHFRHGF 620
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 621 CSCKDYW 627
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 103/230 (44%), Gaps = 33/230 (14%)
Query: 82 VCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ-LGALELGRWIHS 140
V W A+I G R G + F +M R P VT V VLSAC + + LG +H
Sbjct: 88 VAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHG 147
Query: 141 YMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHG---- 196
+ + + V AL++MY+ C D+ A +VF+ M+ R V ++ SL++GLA G
Sbjct: 148 RVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDE 207
Query: 197 ---------------------------RSIEAVEMFREMINQGIRPTKVTFVGVLNACSH 229
R EA+EMFREM + + T V V+ AC+
Sbjct: 208 ARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQ 267
Query: 230 GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM 279
G +++G + M+R GI+ ++D+ S+ G E A D M
Sbjct: 268 LGALEMGEWVRVYMSRQ-GIKMDAFVGNALIDMYSKCGSIERALDVFKGM 316
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 112/246 (45%), Gaps = 12/246 (4%)
Query: 113 RPNEVTIVCVLSACSQL----GALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
RP+ T +L A ++ G+ R +H+++ + + N V +L+ Y+ GD
Sbjct: 16 RPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVASSLVAAYTAGGDGA 75
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A + E +N+LI+G GR E+ F +M G PT VT+V VL+AC
Sbjct: 76 AARALVGECDTP--VAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACG 133
Query: 229 HGGL-VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
G V LG ++ + G+ P + +VD+ + A+ M++ +
Sbjct: 134 KGTRDVLLGMQVHGRVVGS-GVLPDLRVENALVDMYAECADMGSAWKVFDGMQVR-SVVS 191
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
SLLS G++ + R+ + D+ ++ + + Y + +++EA+++ +M+
Sbjct: 192 WTSLLSGLARLGQVDEARDLFDRMPE---RDTVSWTAMIDGYVWAARFREALEMFREMQY 248
Query: 348 AGVQKE 353
+ V +
Sbjct: 249 SNVSAD 254
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/489 (47%), Positives = 317/489 (64%), Gaps = 3/489 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR + + + + N + ++++Y KCG +DA +LFD M E D V T M++ Y
Sbjct: 253 GRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEE-KDNVTWTTMLDGYA 311
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ-RDNVRPNEVTIV 120
E A EV + + KD V W A+I +NG+ AL +F E+Q + N++ N++T+V
Sbjct: 312 ISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLV 371
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
LSAC+Q+GALELGRWIHSY+ K+ I +N V ALI+MYS+CGD++KA +VF +++R
Sbjct: 372 STLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKR 431
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++++I GLAMHG EAV+MF +M ++P VTF V ACSH GLVD +F
Sbjct: 432 DVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLF 491
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
M YGI P+ +HY CIVD+L R G E+A FI M I P + G+LL ACKIH
Sbjct: 492 YKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHAN 551
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
L L E RLL+ + G +VLLSN YA SGKW ++R M+ G++KEPGCSSIE
Sbjct: 552 LSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIE 611
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE-KEWALAI 419
++ IHEF+ GD HP E++Y K+ E+ + +K GY P VL IE+ E KE +L +
Sbjct: 612 IDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEMSHVLQIIEEEEMKEQSLNL 671
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAICYGLIST+ IRV+KNLR+C DCH++ KLI+ + R+IIVRDR RFHHF N
Sbjct: 672 HSEKLAICYGLISTEAPKAIRVIKNLRMCGDCHAVAKLISQLYNREIIVRDRYRFHHFRN 731
Query: 480 GTCSCGDYW 488
G CSC D+W
Sbjct: 732 GQCSCNDFW 740
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 159/284 (55%), Gaps = 34/284 (11%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+DV + +I+CY G +++A +VF+ +K KD V W +MI+G V+ G +AL+LF++M
Sbjct: 166 SDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKM 225
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ ++V+ + VT+V VLSAC+++ LE GR + SY+ ++R+++N + A+++MY++CG I
Sbjct: 226 ESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSI 285
Query: 168 DKALQVFEEMKE-------------------------------RDVTTYNSLIAGLAMHG 196
+ A ++F+ M+E +D+ +N+LI+ +G
Sbjct: 286 EDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNG 345
Query: 197 RSIEAVEMFREM-INQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEH 255
+ EA+ +F E+ + + I+ ++T V L+AC+ G ++LG I S + GI+
Sbjct: 346 KPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWI-HSYIKKNGIKMNFYV 404
Query: 256 YGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
++ + S+ G E+A + +++ D + +++ +HG
Sbjct: 405 TSALIHMYSKCGDLEKAREVFNSVE-KRDVFVWSAMIGGLAMHG 447
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 135/278 (48%), Gaps = 7/278 (2%)
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM--QRDNVRPNEVTIVCVL 123
+E A +VF + ++ W +I + ++ F +M PN+ T ++
Sbjct: 81 LEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLI 140
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
A +++ +L LG+ +H K + + V +LI+ Y CGD+D A +VF +KE+DV
Sbjct: 141 KAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVV 200
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
++NS+I G G +A+E+F++M ++ ++ + VT VGVL+AC+ ++ G + S
Sbjct: 201 SWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVC-SY 259
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQL 303
+ + + ++D+ ++ G E+A M+ D++ ++L I +
Sbjct: 260 IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLDGYAISEDYEA 318
Query: 304 GEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQI 341
++ + D + L +AY +GK EA+ +
Sbjct: 319 AREVLNAM---PKKDIVAWNALISAYEQNGKPNEALLV 353
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 214/465 (46%), Positives = 312/465 (67%), Gaps = 1/465 (0%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
L++++ CGE +A +FD M DV++ T ++ + G ++ A + F ++ +D V
Sbjct: 249 LIDMFAACGEMDEAQSVFDNMKN-RDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVS 307
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
WTAMIDG +R AL LFREMQ NV+P+E T+V +L+AC+ LGALELG W+ +Y+
Sbjct: 308 WTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYID 367
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
K+ I + VG ALI+MY +CG++ KA +VF+EM +D T+ ++I GLA++G EA+
Sbjct: 368 KNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALA 427
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
MF MI I P ++T++GVL AC+H G+V+ G F SMT +GI+P + HYGC+VDLL
Sbjct: 428 MFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLL 487
Query: 264 SRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV 323
R GR EEA++ I NM + P+ I+ GSLL AC++H +QL E AK++L+ + YV
Sbjct: 488 GRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYV 547
Query: 324 LLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYK 383
LL N YA+ +W+ Q+R M E G++K PGCS +E+N ++EF+ GD HPQ ++IY
Sbjct: 548 LLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYA 607
Query: 384 KMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVK 443
K++ + Q + GYSP T V D+ + +KE AL HSE+LAI Y LIS+ P TIR+VK
Sbjct: 608 KLENMMQDLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGITIRIVK 667
Query: 444 NLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
NLR+C DCH M KL++ R++IVRD+ RFHHF +G+CSC ++W
Sbjct: 668 NLRMCVDCHHMAKLVSEAYNRELIVRDKTRFHHFRHGSCSCNNFW 712
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 183/418 (43%), Gaps = 82/418 (19%)
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
LV+ A +VF + V W M+ G R + ++ LF EM++ V PN VT+V +LS
Sbjct: 157 LVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLS 216
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
ACS+L LE G+ I+ Y+ ++ N I+ LI+M++ CG++D+A VF+ MK RDV +
Sbjct: 217 ACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVIS 276
Query: 185 YNSLIAGLAMHG-------------------------------RSIEAVEMFREMINQGI 213
+ S++ G A G R IEA+ +FREM +
Sbjct: 277 WTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNV 336
Query: 214 RPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDL----------- 262
+P + T V +L AC+H G ++LG E ++ I+ ++D+
Sbjct: 337 KPDEFTMVSILTACAHLGALELG-EWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAK 395
Query: 263 --------------------LSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHG 299
L+ G EEA +NM I PD I +L AC G
Sbjct: 396 KVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAG 455
Query: 300 KLQLGEQ--IAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
++ G+ I+ + + Y + + +G+ +EA ++ M
Sbjct: 456 MVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNM------------ 503
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
++ N+ + +LG R + Q+ + KQI++LE + + V+L +I K W
Sbjct: 504 PVKPNSIVWGSLLGACRVHKNVQLAE--MAAKQILELEPENGAVYVLLCNIYAACKRW 559
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 140/299 (46%), Gaps = 13/299 (4%)
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVT 118
C E G + A +VF + W MI G R + ++ M N++P+ T
Sbjct: 50 CAHESGKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFT 109
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
+L ++ AL+ G+ + ++ KH D N V A I+M+S C +D A +VF+
Sbjct: 110 FPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGD 169
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
+V T+N +++G + ++ +F EM +G+ P VT V +L+ACS ++ G
Sbjct: 170 AWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKH 229
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
I++ + +E + ++D+ + G +EA NMK D I S+++
Sbjct: 230 IYKYINGGI-VERNLILENVLIDMFAACGEMDEAQSVFDNMK-NRDVISWTSIVTGFANI 287
Query: 299 GKLQLG----EQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
G++ L +QI +R D ++ + + Y ++ EA+ + +M+ + V+ +
Sbjct: 288 GQIDLARKYFDQIPER-------DYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPD 339
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 218/503 (43%), Positives = 327/503 (65%), Gaps = 15/503 (2%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLF---------------DEMP 45
EG++IHG ++K G + LV +Y C +DA LF D+
Sbjct: 140 EGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRK 199
Query: 46 ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
+ +VV +MI+ V G +++A +F + + V W MI G +NG A++LF+
Sbjct: 200 QDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQ 259
Query: 106 EMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG 165
EMQ N+ PN VT+V VL A +++GALELG+WIH Y GK++++++ ++G AL++MYS+CG
Sbjct: 260 EMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCG 319
Query: 166 DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
IDKALQVFE + +R+ T++++I AMHGR+ +A+ F M G+ P V ++G+L+
Sbjct: 320 SIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILS 379
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDH 285
ACSH GLV+ G F M + G++P+IEHYGC+VDLL R G EEA + I NM I PD
Sbjct: 380 ACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDD 439
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
++ +LL ACK+H L++GE++A+ L++ DSG+YV LSN YAS G W+ ++R KM
Sbjct: 440 VIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKM 499
Query: 346 KEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVL 405
K ++K+PGCS IE++ IHEF++ D H + ++I + E+ ++ GY P+T V
Sbjct: 500 KGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLRSNGYRPNTLEVF 559
Query: 406 HDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRK 465
+ ++ E+ AL HSE++A+ +GLIST P +++VKNLR+C DCH+ +KLI+ I KR+
Sbjct: 560 LNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIVKNLRICEDCHASLKLISLIYKRQ 619
Query: 466 IIVRDRNRFHHFENGTCSCGDYW 488
IIVRDR RFH FE+G+CSC DYW
Sbjct: 620 IIVRDRKRFHQFEHGSCSCMDYW 642
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 137/336 (40%), Gaps = 57/336 (16%)
Query: 22 LKLVELYGKCGEFKDAMQL---FDEMPECND-VVASTVMINCYVEHGLVENAFEVFSRVK 77
L L + + C +D QL F + + D + A+ V+ C ++ A VF ++
Sbjct: 20 LILSKPFTSCKTPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMP 79
Query: 78 VKDTVCWTAMIDGLVRNGE---MARALDLFREMQRDN-VRPNEVTIVCVLSACSQLGALE 133
+ CW ++ L + + AL LF M D V+PN T VL AC++ L
Sbjct: 80 EPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLR 139
Query: 134 LGRWIHSYMGKHRIDLNHIVGGALINMYSRC----------------------------- 164
G+ IH + K + V L+ MY C
Sbjct: 140 EGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRK 199
Query: 165 ------------------GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
GDI A +F+EM R V ++N +I+G A +G IEA+ +F+
Sbjct: 200 QDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQ 259
Query: 207 EMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRV 266
EM + I P VT V VL A + G ++LG I ++ +E +VD+ S+
Sbjct: 260 EMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKN-KVEIDDVLGSALVDMYSKC 318
Query: 267 GRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
G ++A + + I +++ A +HG+ +
Sbjct: 319 GSIDKALQVFETLP-KRNAITWSAIIGAFAMHGRAE 353
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 218/503 (43%), Positives = 327/503 (65%), Gaps = 15/503 (2%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLF---------------DEMP 45
EG++IHG ++K G + LV +Y C +DA LF D+
Sbjct: 140 EGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRK 199
Query: 46 ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
+ +VV +MI+ V G +++A +F + + V W MI G +NG A++LF+
Sbjct: 200 QDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQ 259
Query: 106 EMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG 165
EMQ N+ PN VT+V VL A +++GALELG+WIH Y GK++I+++ ++G AL++MYS+CG
Sbjct: 260 EMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCG 319
Query: 166 DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
ID+ALQVFE + +R+ T++++I AMHGR+ +A+ F M G+ P V ++G+L+
Sbjct: 320 SIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILS 379
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDH 285
ACSH GLV+ G F M + G++P+IEHYGC+VDLL R G EEA + I NM I PD
Sbjct: 380 ACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDD 439
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
++ +LL ACK+H L++GE++A+ L++ DSG+YV LSN YAS G W+ ++R KM
Sbjct: 440 VIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKM 499
Query: 346 KEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVL 405
K ++K+PGCS IE++ IHEF++ D H + ++I + E+ ++ GY P+T V
Sbjct: 500 KGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLRSNGYRPNTLEVF 559
Query: 406 HDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRK 465
+ ++ E+ AL HSE++A+ +GLIST P +++VKNLR+C DCH+ +KLI+ I KR+
Sbjct: 560 LNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIVKNLRICEDCHASLKLISLIYKRQ 619
Query: 466 IIVRDRNRFHHFENGTCSCGDYW 488
IIVRDR RFH FE+G+CSC DYW
Sbjct: 620 IIVRDRKRFHQFEHGSCSCMDYW 642
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 138/336 (41%), Gaps = 57/336 (16%)
Query: 22 LKLVELYGKCGEFKDAMQL---FDEMPECND-VVASTVMINCYVEHGLVENAFEVFSRVK 77
L L + + C +D QL F + + D + A+ V+ C ++ A VF ++
Sbjct: 20 LILSKPFTSCKTPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMP 79
Query: 78 VKDTVCWTAMIDGLVRNGE---MARALDLFREMQRDN-VRPNEVTIVCVLSACSQLGALE 133
+ CW ++ L + + AL LF M D V+PN T VL AC++ L
Sbjct: 80 EPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLR 139
Query: 134 LGRWIHSYMGKHRIDLNHIVGGALINMYSRC----------------------------- 164
G+ IH + K + V L+ MY C
Sbjct: 140 EGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRK 199
Query: 165 ------------------GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
GDI A +F+EM +R V ++N +I+G A +G IEA+ +F+
Sbjct: 200 QDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQ 259
Query: 207 EMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRV 266
EM + I P VT V VL A + G ++LG I ++ IE +VD+ S+
Sbjct: 260 EMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKN-KIEIDDVLGSALVDMYSKC 318
Query: 267 GRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
G +EA + + I +++ A +HG+ +
Sbjct: 319 GSIDEALQVFETLP-KRNAITWSAIIGAFAMHGRAE 353
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/521 (43%), Positives = 330/521 (63%), Gaps = 34/521 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN------------- 48
GR +HG V+KLGL + R+ LV++Y K GE +QLFDE P+ N
Sbjct: 157 GRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLIN 216
Query: 49 ---------------------DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAM 87
+ + +IN +V +G ++ A E+F ++ K+ V WT M
Sbjct: 217 GCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTM 276
Query: 88 IDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRI 147
I+G +NG+ +AL +F M + VRPN++T+V L AC+++GAL++G IH+Y+ +
Sbjct: 277 INGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGF 336
Query: 148 DLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
LN +G AL++MY++CG+I A +VF E K +D+ T++ +I G A+HG +A++ F +
Sbjct: 337 QLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVK 396
Query: 208 MINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
M + GI P +V F+ +L ACSH G VD G F+SM DY IEP ++HY IVDLL R G
Sbjct: 397 MKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAG 456
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSN 327
R +EA FI +M I PD ++ G+L AC+ H +++ E A++LL G+YV LSN
Sbjct: 457 RLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSN 516
Query: 328 AYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQE 387
YA+ G+W++ ++R MK GV+K+PG S IEV ++H F+ GD H + E+I K++E
Sbjct: 517 VYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEE 576
Query: 388 LKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRV 447
+ K EGY P T VLH+IE+ EKE AL HSE+LA+ +GLIST P +TIR+VKNLRV
Sbjct: 577 ITASAKQEGYMPETAWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRV 636
Query: 448 CNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
C DCHSM+K + +++R+II+RD RFHHF++GTCSCGDYW
Sbjct: 637 CGDCHSMMKYASKLSRREIILRDIKRFHHFKDGTCSCGDYW 677
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 139/305 (45%), Gaps = 19/305 (6%)
Query: 50 VVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
VV + +C ++ ++ A +F + + A+I GL N ++ F M R
Sbjct: 74 VVTQLISSSCSLKS--LDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLR 131
Query: 110 DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDK 169
++RP+ +T+ VL + + L + LGR +H + K ++ + V +L++MY + G++
Sbjct: 132 LSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGF 191
Query: 170 ALQVFEEMKERD----VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
LQ+F+E +R+ + +N LI G G +A +F M + ++ ++N
Sbjct: 192 GLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPER----NAGSWNSLIN 247
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIA 282
G +D E+F M E + + +++ S+ G E+A M +
Sbjct: 248 GFVRNGDLDRARELFVQMP-----EKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVR 302
Query: 283 PDHIMLGSLLSACKIHGKLQLGEQIAKRL-LDCRSADSGTYVLLSNAYASSGKWKEAVQI 341
P+ + + S L AC G LQ+GE+I L + + G L + YA G K A ++
Sbjct: 303 PNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRV 362
Query: 342 RAKMK 346
+ K
Sbjct: 363 FVETK 367
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 104/249 (41%), Gaps = 26/249 (10%)
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
R E + ++ A + L L IH+ + H + N V LI+ +D AL
Sbjct: 37 RSPETHFIPLIHASNTLPQLHQ---IHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALS 93
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA------ 226
+F ++ +N+LI GLA + R +V F M+ IRP ++T VL +
Sbjct: 94 IFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVD 153
Query: 227 -----CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKI 281
C HGG++ LG E F S R ++ ++ + +G + +D
Sbjct: 154 VGLGRCLHGGVMKLGLE-FDSFVRVSLVDMYVK--------IGELGFGLQLFDESPQRNK 204
Query: 282 APDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQI 341
A ++ L++ C G L + + + + ++G++ L N + +G A ++
Sbjct: 205 AESILLWNVLINGCCKVGDLSKAASLFEAMPE---RNAGSWNSLINGFVRNGDLDRAREL 261
Query: 342 RAKMKEAGV 350
+M E V
Sbjct: 262 FVQMPEKNV 270
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/488 (45%), Positives = 320/488 (65%), Gaps = 2/488 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H V+K G + L+ LY + A QLF+ + DVV+ MI+ YV
Sbjct: 185 GLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFN-LCSARDVVSWNAMIDGYV 243
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+H + +A VF R+ +D + W MI+G G+ AL LF +M+ V+P E T+V
Sbjct: 244 KHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVS 303
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+LSAC+ LGAL+ G +H+Y+ +RI++N IVG AL++MY++CG I A QVF M+ +D
Sbjct: 304 LLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKD 363
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +N++IAG+A+HG EA ++F+EM G+ P +TFV +L+ACSH G+VD G ++
Sbjct: 364 VLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLD 423
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M+ YGIEP++EHYGC++DLL+R G EEA + I M + P+ LG+LL C+IHG
Sbjct: 424 CMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNF 483
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LGE + KRL++ + SG Y+LLSN YA++ KW +A ++R MK G+ K PG S IE+
Sbjct: 484 ELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIEL 543
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLE-GYSPSTEVVLHDIEDWEKEWALAIH 420
+H F+ GD HP+ +IY+K+ E+ +K GYS T VL D+E+ +KE ALA+H
Sbjct: 544 KGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVH 603
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI YGL+ IR+VKNLRVC DCH +IKLI+ + R+IIVRDRNRFHHFE+G
Sbjct: 604 SEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRNRFHHFEDG 663
Query: 481 TCSCGDYW 488
CSC D+W
Sbjct: 664 ECSCLDFW 671
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 138/305 (45%), Gaps = 34/305 (11%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A +F ++ + ++I L + AL L+ M + ++P+ +T V+ AC++
Sbjct: 119 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 178
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
G +H+++ K + + + +LI++Y+ D+ A Q+F RDV ++N++
Sbjct: 179 SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAM 238
Query: 189 IAGLAMH-------------------------------GRSIEAVEMFREMINQGIRPTK 217
I G H G+ EA+ +F +M G++PT+
Sbjct: 239 IDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTE 298
Query: 218 VTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFIT 277
T V +L+AC+H G +D G + + D IE +VD+ ++ G+ A
Sbjct: 299 ATVVSLLSACAHLGALDKGLHL-HTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFN 357
Query: 278 NMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNAYASSGKWK 336
M+ + D + ++++ IHG ++ +Q+ K + + + T+V + +A + +G
Sbjct: 358 AME-SKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVD 416
Query: 337 EAVQI 341
E ++
Sbjct: 417 EGQKL 421
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 36/213 (16%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G +H + + N LV++Y KCG+ A Q+F+ M E DV+A
Sbjct: 316 KGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAM-ESKDVLA-------- 366
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
W +I G+ +G + A LF+EM+ V PN++T V
Sbjct: 367 -----------------------WNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFV 403
Query: 121 CVLSACSQLGALELGRWIHSYM-GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
+LSACS G ++ G+ + M + I+ G +I++ +R G +++A+++ M
Sbjct: 404 AILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPM 463
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMF-REMIN 210
E + + +L+ G +HG + E EM + +IN
Sbjct: 464 EPNPSALGALLGGCRIHG-NFELGEMVGKRLIN 495
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 84/182 (46%), Gaps = 5/182 (2%)
Query: 170 ALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH 229
A +F ++ + YNSLI L+ +EA+ ++ M+ G++P +T+ V+ AC+
Sbjct: 119 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 178
Query: 230 GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLG 289
+ G + + + G E ++ L + G+ A + N+ A D +
Sbjct: 179 SSVTWFGLLVHTHVVKS-GFECDSYIVSSLIHLYAN-GKDLGAAKQLFNLCSARDVVSWN 236
Query: 290 SLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
+++ H ++ + R++ CR D ++ + N YA GK EA+ + +M+ G
Sbjct: 237 AMIDGYVKHVEMGHARMVFDRMV-CR--DVISWNTMINGYAICGKPNEALALFDQMRAVG 293
Query: 350 VQ 351
V+
Sbjct: 294 VK 295
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/487 (45%), Positives = 308/487 (63%), Gaps = 30/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G H Q++K+G + + L++ Y K G ++A LFD M E N
Sbjct: 49 GEAFHCQIMKMGFEYDMILQTGLLDFYAKHGYVEEARNLFDNMTERN------------- 95
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++V W MI V+ GE A+ +F++MQ +NV+P EVT+V
Sbjct: 96 -----------------SNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVS 138
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+LSAC+ LGAL++G WIH Y+ R+ ++ ++G ALI+MY +CG ++ A+ VF + ++
Sbjct: 139 LLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKN 198
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ +NS+I GL M+GR EA+ F M +GI+P VTFVG+L+ CSH GL+ G F
Sbjct: 199 IFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFS 258
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M YG+EP +EHYGC+VDLL R G +EA + I M + P+ ++LGSLL AC+IH
Sbjct: 259 EMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDT 318
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LGEQ+ ++LL+ D G YV LSN YAS +W + R M + GV K PGCSSIEV
Sbjct: 319 KLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEV 378
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
NN +HEF+ GD HPQ QI + E+ + +K +G+ P+T VLHDIE+ EKE A+ HS
Sbjct: 379 NNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYHS 438
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ER+A+ +GL+ST P TIRVVKNLR C+DCHS +KLI+N KR+IIVRDR RFHHF NG+
Sbjct: 439 ERIAVAFGLMSTPPGKTIRVVKNLRTCSDCHSAMKLISNAFKREIIVRDRKRFHHFRNGS 498
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 499 CSCNDYW 505
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 135/300 (45%), Gaps = 48/300 (16%)
Query: 87 MIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHR 146
MI + +G L + M R++V P++ + +L +C+ G +LG H + K
Sbjct: 1 MIRVSLESGVCPDFLGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMG 60
Query: 147 IDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT--TYNSLIAGLAMHGRSIEAVEM 204
+ + I+ L++ Y++ G +++A +F+ M ER+ T+N++I+ G A+ M
Sbjct: 61 FEYDMILQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISM 120
Query: 205 FREMINQGIRPTKVTFVGVLNACSHGGLVDLG---------------------------- 236
F++M ++ ++PT+VT V +L+AC+H G +D+G
Sbjct: 121 FQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCK 180
Query: 237 -------FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHI 286
++F ++R I + I+ L GR EEA M+ I PD +
Sbjct: 181 CGALEAAIDVFHGLSRK-----NIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGV 235
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT--YVLLSNAYASSGKWKEAVQ-IRA 343
+LS C G L G++ +L + G Y + + +G KEA++ IRA
Sbjct: 236 TFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRA 295
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/466 (47%), Positives = 317/466 (68%), Gaps = 2/466 (0%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
++ Y G+ +A +LFDEMPE N +V+ M+ +V+ G VE+AF +FS + +D V
Sbjct: 298 MINGYAIVGKIDEAKRLFDEMPERN-LVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVS 356
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W +M+ + G+ AL LF +M+ V+P E T+V +LSAC+ LGAL+ G +H+Y+
Sbjct: 357 WNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYIN 416
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
+RI++N IVG AL++MY++CG I A QVF M+ +DV +N++IAG+A+HG EA +
Sbjct: 417 DNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQ 476
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
+F+EM G+ P +TFV +L+ACSH G+VD G ++ M+ YGIEP++EHYGC++DLL
Sbjct: 477 LFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLL 536
Query: 264 SRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV 323
+R G EEA + I M + P+ LG+LL C+IHG +LGE + KRL++ + SG Y+
Sbjct: 537 ARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYI 596
Query: 324 LLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYK 383
LLSN YA++ KW +A ++R MK G+ K PG S IE+ +H F+ GD HP+ +IY+
Sbjct: 597 LLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYE 656
Query: 384 KMQELKQIVKLE-GYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVV 442
K+ E+ +K GYS T VL D+E+ +KE ALA+HSE+LAI YGL+ IR+V
Sbjct: 657 KLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIV 716
Query: 443 KNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
KNLRVC DCH +IKLI+ + R+IIVRDRNRFHHFE+G CSC D+W
Sbjct: 717 KNLRVCRDCHHVIKLISKVYGREIIVRDRNRFHHFEDGECSCLDFW 762
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 148/355 (41%), Gaps = 55/355 (15%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A +F ++ + ++I L + AL L+ M + ++P+ +T V+ AC++
Sbjct: 148 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 207
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
G +H+++ K + + + +LI++Y+ D+ A Q+F RDV ++N++
Sbjct: 208 SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAM 267
Query: 189 IAGLAMH-------------------------------GRSIEAVEMFREMINQGIRPTK 217
I G H G+ EA +F EM + +
Sbjct: 268 IDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNL---- 323
Query: 218 VTFVGVLNACSHGGLVDLGFEIFQSMT-RDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFI 276
V++ +L G V+ F +F M RD + + ++ ++ G+P EA
Sbjct: 324 VSWNSMLAGFVKCGNVEDAFGLFSEMPCRD------VVSWNSMLACYAQCGKPNEALALF 377
Query: 277 TNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNAYASS 332
M+ + P + SLLSAC G L G + + D R +S L + YA
Sbjct: 378 DQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKC 437
Query: 333 GKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQE 387
GK A Q+ M+ V ++I IH G+++ Q Q++K+M+E
Sbjct: 438 GKISLATQVFNAMESKDVL---AWNTIIAGMAIH----GNVKEAQ--QLFKEMKE 483
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 36/213 (16%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G +H + + N LV++Y KCG+ A Q+F+ M E DV+A +I
Sbjct: 407 KGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAM-ESKDVLAWNTII--- 462
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G+ +G + A LF+EM+ V PN++T V
Sbjct: 463 ----------------------------AGMAIHGNVKEAQQLFKEMKEAGVEPNDITFV 494
Query: 121 CVLSACSQLGALELGRWIHSYM-GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
+LSACS G ++ G+ + M + I+ G +I++ +R G +++A+++ M
Sbjct: 495 AILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPM 554
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMF-REMIN 210
E + + +L+ G +HG + E EM + +IN
Sbjct: 555 EPNPSALGALLGGCRIHG-NFELGEMVGKRLIN 586
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/488 (44%), Positives = 329/488 (67%), Gaps = 2/488 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G + H Q+++ G +++ LV +Y CG A ++F +MP DVV+ T M+ Y
Sbjct: 138 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMP-FRDVVSWTSMVAGYC 196
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G+VE+A E+F + ++ W+ MI+G +N +A+DLF M+R+ V NE +V
Sbjct: 197 KCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETVMVS 256
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V+S+C+ LGALE G H Y+ K + +N I+G AL++MY RCG+I+KA++VFEE+ ++D
Sbjct: 257 VISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEELPDKD 316
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+++S+I GLA+HG + +A+ F +M+ G P +T VL+ACSHGGLVD G EI++
Sbjct: 317 SLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLVDKGLEIYE 376
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+M RDYGIEP++EHYGCIVD+L R G+ EA +FI M + P+ +LG+LL ACKI+
Sbjct: 377 NMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGALLGACKIYKNT 436
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++ E++ L++ + SG YVLLSN YA +G+W++ +R MKE V+K PG S IE+
Sbjct: 437 EVAERVGNMLIEVKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEKLVKKPPGWSLIEI 496
Query: 362 NNEIHEFILG-DIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+ +I++F +G D +HP+ +I + +E+ ++L GY +T D+++ EKE A+ +H
Sbjct: 497 DGKINKFSMGDDQKHPEMGKIKRLWEEILGKIRLIGYKGNTGDAFFDVDEEEKETAIHMH 556
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI YG++ TK TTIR+VKNLRVC DCH+ KLI+ + R+ IVRDRNRFHHF NG
Sbjct: 557 SEKLAIAYGMMKTKTGTTIRIVKNLRVCEDCHTATKLISEVYGREFIVRDRNRFHHFRNG 616
Query: 481 TCSCGDYW 488
CSC DYW
Sbjct: 617 LCSCRDYW 624
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 118/266 (44%), Gaps = 33/266 (12%)
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
L+ A+ +FS+++ + + +I E ++A + +M + + P+ +T ++
Sbjct: 68 LLGYAYGIFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIK 127
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
A +++ + +G HS + + + V +L++MY+ CG I A ++F +M RDV +
Sbjct: 128 ASTEMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVS 187
Query: 185 YNSLIAGLAMHGRSIEAVEMFRE-----------MIN--------------------QGI 213
+ S++AG G +A EMF E MIN +G+
Sbjct: 188 WTSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGV 247
Query: 214 RPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAY 273
+ V V+++C+H G ++ G + + + + + + +VD+ R G E+A
Sbjct: 248 VANETVMVSVISSCAHLGALEFGERAHEYVVKSH-MTVNLILGTALVDMYWRCGEIEKAI 306
Query: 274 DFITNMKIAPDHIMLGSLLSACKIHG 299
+ D + S++ +HG
Sbjct: 307 RVFEELP-DKDSLSWSSIIKGLAVHG 331
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/488 (44%), Positives = 327/488 (67%), Gaps = 1/488 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G++ H ++K+G S+ + LV +Y +CG +DA +FD+M E MI +
Sbjct: 28 QGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKMSE-RSTRTWNAMITGH 86
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++ ++ A ++F + +D V WTA+I G +NG +L++F +M++ ++ + +
Sbjct: 87 AQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMG 146
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSAC+ L ALELGR H+Y+ + L+ +VG AL++MY++ G ++ A QVF++M +R
Sbjct: 147 SVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQR 206
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+ ++NS+I G A HGR +AV +F +M+ GI+P +++FVGVL+ACSH GLV+ G F
Sbjct: 207 NEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYF 266
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
MT++YGI P + HY C++DLL R G +EA +FI M + PD + G+LL AC+IHG
Sbjct: 267 NLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIHGN 326
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+L ++IA+ LL +G YVLLSN YA++G+W +A ++R MK+ GV K+PG S IE
Sbjct: 327 TELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWDDAAKVRKLMKDRGVMKQPGYSWIE 386
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
V +H F+ G+ HPQ ++I++ ++ L + +K GY P+ VL D+ED EKE +L+ H
Sbjct: 387 VKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKAAGYVPNKNFVLQDVEDDEKELSLSHH 446
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI +G+I+T P TTIRV KNLRVC DCH++IK I+ RKI+VRD NRFHHF++G
Sbjct: 447 SEKLAIAFGIINTNPGTTIRVAKNLRVCGDCHTVIKFISLNFTRKIVVRDANRFHHFKDG 506
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 507 RCSCGDYW 514
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 114/237 (48%), Gaps = 38/237 (16%)
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
V+PN+ T+ V+ AC+ + +LE G+ H+Y+ K + + +V AL++MY+RCG ++ A
Sbjct: 6 VKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAG 65
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
VF++M ER T+N++I G A + +A+++F EM + + V++ V+ + G
Sbjct: 66 HVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDV----VSWTAVIAGYAQNG 121
Query: 232 LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSL 291
D +F M + T MK D ++GS+
Sbjct: 122 YGDESLNVFNQMRK-------------------------------TGMK--SDRFIMGSV 148
Query: 292 LSACKIHGKLQLGEQIAKRLLDCRSA-DSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
LSAC L+LG Q ++ A D L + YA SG ++A Q+ KM +
Sbjct: 149 LSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQ 205
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/477 (47%), Positives = 319/477 (66%), Gaps = 6/477 (1%)
Query: 18 RSTRLKLVELYGKCGEFKD-AM-----QLFDEMPECNDVVASTVMINCYVEHGLVENAFE 71
+ + LV + C +D AM + DE VV +TV+++ Y + G V+ A +
Sbjct: 184 KPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARD 243
Query: 72 VFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGA 131
+F + + K+ W MI+G V + AL LFREMQ ++ ++VT+ +L AC+ LGA
Sbjct: 244 LFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGA 303
Query: 132 LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAG 191
LELG+W+H+Y+ K RID++ +G AL++MY++CG I+ A+QVF EM E+DV T+ +LI G
Sbjct: 304 LELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILG 363
Query: 192 LAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEP 251
LAM G++ A++ F EM +G++P +TFVGVL ACSH G VD G F SM+ YGI+P
Sbjct: 364 LAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQP 423
Query: 252 QIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
IEHYG +VD+L R GR EA + I +M +APD +LG LL AC+IHG L+ E+ AK+L
Sbjct: 424 TIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQL 483
Query: 312 LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILG 371
L+ SGTYVLLSN Y SS KW+EA + R M E G++K PGCS IEV+ +HEF+ G
Sbjct: 484 LEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVHEFVKG 543
Query: 372 DIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLI 431
D H Q +I + ++++ +K GY P VL D+ + EKE L++HSE+LAI +GL+
Sbjct: 544 DSSHRQSSEINEMLEDMISKLKNAGYVPDKSEVLFDMAEEEKETELSLHSEKLAIAFGLL 603
Query: 432 STKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
ST T IRVVKNLR+C+DCHS KLI+ + R+IIVRDRNRFHHF++GTCSC +W
Sbjct: 604 STSVGTPIRVVKNLRICSDCHSATKLISKLYNREIIVRDRNRFHHFKDGTCSCRGFW 660
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 112/467 (23%), Positives = 193/467 (41%), Gaps = 96/467 (20%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG++IH KLG S+ + L+ +Y CG A ++FD+M +
Sbjct: 103 EGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMED-------------- 148
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLF-REMQRDNVRPNEVTI 119
K V W MI + + A+ LF R M+ +NV+PNEVT+
Sbjct: 149 ------------------KTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTL 190
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V VL+AC++ L + + IH Y+ +H + ++ L+++Y +CG + A +F++ +E
Sbjct: 191 VNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQE 250
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG--- 236
+++ ++N +I G EA+ +FREM +GI+ KVT +L AC+H G ++LG
Sbjct: 251 KNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWL 310
Query: 237 --------------------------------FEIFQSMTRDYGIEPQIEHYGCIVDLLS 264
++F M E + + ++ L+
Sbjct: 311 HAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMP-----EKDVMTWTALILGLA 365
Query: 265 RVGRPEEAYDFITNMKI---APDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT 321
G+ E A + M I PD I +L+AC G + G + D
Sbjct: 366 MCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTI 425
Query: 322 --YVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQR- 378
Y L + +G+ EA ++ M A Q F+LG + R
Sbjct: 426 EHYGGLVDILGRAGRIAEAEELIKSMPMAPDQ----------------FVLGGLLGACRI 469
Query: 379 -EQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERL 424
+ + KQ+++++ Y T V+L +I K+W A + L
Sbjct: 470 HGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTREL 516
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 145/347 (41%), Gaps = 55/347 (15%)
Query: 48 NDVVASTVMINCYV-EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
+ AS ++ C + E G ++ A VFS++ + ++I G AL ++E
Sbjct: 19 DPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCTDKNLHQEALLFYQE 78
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M + P+ T + +C G+ IH + K + L+NMYS CG
Sbjct: 79 MMVQGLIPDRYTFPSLFKSCRNSSE---GKQIHCHSTKLGFASDTYAQNTLMNMYSNCGC 135
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMF-REMINQGIRPTKVTFVGVLN 225
+ A +VF++M+++ V ++ ++I A + EAV +F R M ++ ++P +VT V VL
Sbjct: 136 LVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLT 195
Query: 226 ACS-----------------HG------------------GLVDLGFEIFQSMTRDYGIE 250
AC+ HG G V L ++F D E
Sbjct: 196 ACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLF-----DKAQE 250
Query: 251 PQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGE-- 305
+ + +++ EEA M+ I D + + SLL AC G L+LG+
Sbjct: 251 KNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWL 310
Query: 306 --QIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
I K+ +D D L + YA G + A+Q+ +M E V
Sbjct: 311 HAYIKKQRID---VDVALGTALVDMYAKCGSIETAIQVFHEMPEKDV 354
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/489 (46%), Positives = 318/489 (65%), Gaps = 2/489 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
E +IH Q+ KLG ++ L+ Y G FK A LFD +PE +DV ++V I Y
Sbjct: 133 ETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSV-IKGY 191
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V+ G ++ A +F ++ K+ + WT MI G V+ AL LF EMQ +V P+ V++
Sbjct: 192 VKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLA 251
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
LSAC+QLGALE G+WIHSY+ K RI ++ ++G LI+MY++CG++++AL+VF+ +K++
Sbjct: 252 NALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKK 311
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
V + +LI+G A HG EA+ F EM GI+P +TF VL ACS+ GLV+ G IF
Sbjct: 312 SVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF 371
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM RDY ++P IEHYGCIVDLL R G +EA FI M + P+ ++ G+LL AC+IH
Sbjct: 372 YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKN 431
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++LGE+I + L+ G YV +N +A KW +A + R MKE GV K PGCS+I
Sbjct: 432 IELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTIS 491
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD-IEDWEKEWALAI 419
+ HEF+ GD HP+ E+I K + +++ ++ GY P E +L D ++D E+E +
Sbjct: 492 LEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQ 551
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI YGLI TKP T IR++KNLRVC DCH + KLI+ I KR I++RDR RFHHF +
Sbjct: 552 HSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRD 611
Query: 480 GTCSCGDYW 488
G CSCGDYW
Sbjct: 612 GKCSCGDYW 620
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 103/241 (42%), Gaps = 34/241 (14%)
Query: 72 VFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGA 131
VF DT W MI G + E R+L L++ M + N T +L ACS L A
Sbjct: 71 VFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSA 130
Query: 132 LELGRWIH--------------------SYMGKHRIDLNHIV-----------GGALINM 160
E IH SY L H++ ++I
Sbjct: 131 FEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKG 190
Query: 161 YSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTF 220
Y + G +D AL +F +M E++ ++ ++I+G + EA+++F EM N + P V+
Sbjct: 191 YVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSL 250
Query: 221 VGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI-VDLLSRVGRPEEAYDFITNM 279
L+AC+ G ++ G I + + + GC+ +D+ ++ G EEA + N+
Sbjct: 251 ANALSACAQLGALEQGKWIHSYLNKTRIRMDSV--LGCVLIDMYAKCGEMEEALEVFKNI 308
Query: 280 K 280
K
Sbjct: 309 K 309
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/501 (44%), Positives = 324/501 (64%), Gaps = 13/501 (2%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLF-------------DEMPEC 47
EG++IHG LK G + LV +Y CG KDA LF D
Sbjct: 146 EGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRD 205
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
++V VMI+ Y+ G + A +F +++ + V W MI G NG A+++FREM
Sbjct: 206 GEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM 265
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
++ ++RPN VT+V VL A S+LG+LELG W+H Y I ++ ++G ALI+MYS+CG I
Sbjct: 266 KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGII 325
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+KA+ VFE + +V T++++I G A+HG++ +A++ F +M G+RP+ V ++ +L AC
Sbjct: 326 EKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTAC 385
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SHGGLV+ G F M G+EP+IEHYGC+VDLL R G +EA +FI NM I PD ++
Sbjct: 386 SHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVI 445
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+LL AC++ G +++G+++A L+D DSG YV LSN YAS G W E ++R +MKE
Sbjct: 446 WKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKE 505
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
++K+PGCS I+++ +HEF++ D HP+ ++I + E+ ++L GY P T VL +
Sbjct: 506 KDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLN 565
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
+E+ +KE L HSE++A +GLIST P IR+VKNLR+C DCHS IKLI+ + KRKI
Sbjct: 566 LEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKIT 625
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
VRDR RFHHF++G+CSC DYW
Sbjct: 626 VRDRKRFHHFQDGSCSCMDYW 646
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 128/295 (43%), Gaps = 52/295 (17%)
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMAR--ALDLFREMQRDN-VRPNEV 117
+ H ++ A ++F+++ ++ W +I G + E A+ LF EM D V PN
Sbjct: 70 LHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRF 129
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC------------- 164
T VL AC++ G ++ G+ IH K+ + V L+ MY C
Sbjct: 130 TFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKN 189
Query: 165 --------------------------------GDIDKALQVFEEMKERDVTTYNSLIAGL 192
GD A +F++M++R V ++N++I+G
Sbjct: 190 IIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGY 249
Query: 193 AMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQ 252
+++G +AVE+FREM IRP VT V VL A S G ++LG E D GI
Sbjct: 250 SLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGIRID 308
Query: 253 IEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQI 307
++D+ S+ G E+A + + I ++++ IHG Q G+ I
Sbjct: 309 DVLGSALIDMYSKCGIIEKAIHVFERLP-RENVITWSAMINGFAIHG--QAGDAI 360
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/518 (43%), Positives = 333/518 (64%), Gaps = 32/518 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYG-------------------------------K 30
G ++H V+K GL + R +++YG K
Sbjct: 149 GVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLK 208
Query: 31 CGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDG 90
CGE + A +LF M + N V + VM++ + G++E A E+F+ +K K+ + W+AMIDG
Sbjct: 209 CGEVEAAKELFWSMEDKN-VGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDG 267
Query: 91 LVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLN 150
++ G AL++F MQR+ +RP + + VL+AC+ LGAL+ GRWIH+Y+ + +
Sbjct: 268 YIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFD 327
Query: 151 HIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
++G AL++MY++CG +D A VFE+M++++V T+N++I GL MHGR+ +A+E+F +M
Sbjct: 328 AVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQK 387
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
Q RP +T +GVL+AC+H G+VD G IF SM YGIEP +EHYGC+VDLL R G
Sbjct: 388 QKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLG 447
Query: 271 EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYA 330
EA + + +M + P + G+LL AC+ HG ++LGE++ K LL+ +SG Y LLSN YA
Sbjct: 448 EAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYA 507
Query: 331 SSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQ 390
+G+W + +R MKE GV+ G S I+ + +HEF +GD HPQ + IY ++ + +
Sbjct: 508 RAGRWDDVANVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLKNMIK 567
Query: 391 IVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCND 450
+K+EG+SP+T VL DIE+ EKE L HSE+LAI +GLI+TKP TTI VVKNLR+C D
Sbjct: 568 RLKMEGFSPNTSQVLFDIEEEEKEAELQYHSEKLAIAFGLINTKPGTTIHVVKNLRMCED 627
Query: 451 CHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
CHS KLI+ + R+IIVRDR R+HHF+ GTCSC D+W
Sbjct: 628 CHSAFKLISQVYDREIIVRDRARYHHFKTGTCSCKDFW 665
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 134/308 (43%), Gaps = 15/308 (4%)
Query: 49 DVVASTVMINCYVEHGL--VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
D S ++ CY + A +VF V + + +I G ++N E +A+ + +
Sbjct: 61 DHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYK 120
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M + RPN+ T + AC+ A E G +H+++ K + + + A I MY G+
Sbjct: 121 MMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGE 180
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
++ A ++ E DV +N++I G G A E+F M ++ + V G+
Sbjct: 181 VEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKC 240
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAP 283
G+++ E+F M I + ++D + G +EA + M+ I P
Sbjct: 241 ----GMIEEARELFNEMKEKNEIS-----WSAMIDGYIKGGYYKEALEVFNVMQREEIRP 291
Query: 284 DHIMLGSLLSACKIHGKLQLGEQIAKRL-LDCRSADSGTYVLLSNAYASSGKWKEAVQIR 342
+L S+L+AC G L G I + + S D+ L + YA G+ A +
Sbjct: 292 RKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVF 351
Query: 343 AKMKEAGV 350
KM++ V
Sbjct: 352 EKMEKKEV 359
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 229/499 (45%), Positives = 325/499 (65%), Gaps = 11/499 (2%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN----------DV 50
EG++IHG LK+G S+ + LV +Y KCGE A ++FD M + + ++
Sbjct: 133 EGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNL 192
Query: 51 VASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD 110
V+ MIN Y++ G ++A E+F ++ + D V W MI G NG+ A+ +F M +
Sbjct: 193 VSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKL 252
Query: 111 NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
RP+ T+V VLSA S L L GRWIHSYM K+ +L+ I+G +LI MY++CG I+ A
Sbjct: 253 GSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESA 312
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
L VF ++++ V + ++I GL +HG + A+ +F EM G++P + F+GVLNAC+H
Sbjct: 313 LTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHA 372
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGS 290
GLVD G + F M +Y IEP +EHYGC+VD+L R G EEA + I NM I+P+ ++ S
Sbjct: 373 GLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMS 432
Query: 291 LLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
LL + HGK+ +GE A+R+++ G Y+LLSN YA+SG W++ +R M + G
Sbjct: 433 LLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGF 492
Query: 351 QKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIE- 409
+K+PGCSS+E +HEFI+GDI HPQ ++IY KM E+K+ +K G+ P T VL IE
Sbjct: 493 RKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEG 552
Query: 410 DWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVR 469
+ EKE L HSERLAI +GLI+ KP IR++KNLRVCNDCHS+ KL++ I R+IIVR
Sbjct: 553 EKEKEAELENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVR 612
Query: 470 DRNRFHHFENGTCSCGDYW 488
D RFHHF+NG+CSC DYW
Sbjct: 613 DNCRFHHFKNGSCSCMDYW 631
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 45/210 (21%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A +F R++ + + W +I V N + LF E+ + + P+ T+ CV+ C++
Sbjct: 69 ARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCAR 127
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
LG ++ G+ IH K + V G+L+NMYS+CG+ID A +VF+ M ++DV +NSL
Sbjct: 128 LGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSL 187
Query: 189 ------------------------------------------IAGLAMHGRSIEAVEMFR 206
IAG ++G+ ++AV+MF
Sbjct: 188 IDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFF 247
Query: 207 EMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
M+ G RP+ T V VL+A S GL LG
Sbjct: 248 MMLKLGSRPSHATLVSVLSAVS--GLAVLG 275
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 100/222 (45%), Gaps = 13/222 (5%)
Query: 138 IHSYMGKHRIDLNHIVGGALINMYS--RCGDIDKALQVFEEMKERDVTTYNSLIAGLAMH 195
+H++ K I + V L+ +YS + D+ A +F+ ++ R + +N++I +
Sbjct: 35 LHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVEN 94
Query: 196 GRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEH 255
S + + +F E++++ + P T V+ C+ G+V G +I + G +
Sbjct: 95 QFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQI-HGLALKIGFGSDVFV 152
Query: 256 YGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA------CKIHGKLQLG--EQI 307
G +V++ S+ G + A M I D ++ SL+ I+G ++ G +
Sbjct: 153 QGSLVNMYSKCGEIDCARKVFDGM-IDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDSA 211
Query: 308 AKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
+ D T+ L+ Y +G++ +AV++ M + G
Sbjct: 212 LELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLG 253
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 231/494 (46%), Positives = 321/494 (64%), Gaps = 8/494 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++HG V+K G S+ LV LYGKCG +A ++FD++PE N V A T +I+ Y+
Sbjct: 127 GIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKN-VAAWTAIISGYI 185
Query: 62 EHGLVENAFEVFSR-------VKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP 114
G A ++F R + KD V W++MI G NG ALDLF +M + RP
Sbjct: 186 GVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRP 245
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
+ +V VL AC++LGALELG W + M ++ N ++G ALI+MY++CG +D A +VF
Sbjct: 246 DCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVF 305
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
M+++D+ +N+ I+GLAM G A +F +M GI P TFVG+L AC+H GLVD
Sbjct: 306 RGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVD 365
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
G + F SM R + + P+IEHYGC+VDLL R G +EA+ + +M + + I+ G+LL
Sbjct: 366 EGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGG 425
Query: 295 CKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
C++H QL E + K+L+ ++SG YVLLSN Y++S KW++A +IR+ M E G++K P
Sbjct: 426 CRLHRDTQLVEGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVP 485
Query: 355 GCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKE 414
G S IEV+ +HEF++GD HP E+IY K+ EL + +K GY P+T+ VL DIE+ EKE
Sbjct: 486 GYSWIEVDGVVHEFLVGDTSHPLSEKIYAKLGELVKDLKASGYVPTTDYVLFDIEEEEKE 545
Query: 415 WALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRF 474
+ HSE+LAI +GLIST P IRVVKNLRVC DCH IK I+ T R+IIVRD NRF
Sbjct: 546 HFIGCHSEKLAIAFGLISTAPNDKIRVVKNLRVCGDCHEAIKHISRFTGREIIVRDNNRF 605
Query: 475 HHFENGTCSCGDYW 488
H F +G+CSC DYW
Sbjct: 606 HCFNDGSCSCKDYW 619
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 186/436 (42%), Gaps = 73/436 (16%)
Query: 72 VFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGA 131
+F + K + + MI GLV N +++++ M+++ + P+ T +L AC++L
Sbjct: 64 IFHQTKEPNIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLD 123
Query: 132 LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE--------------- 176
+LG +H + K + + V +L+++Y +CG ID A +VF++
Sbjct: 124 SKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISG 183
Query: 177 -----------------------MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGI 213
M E+D+ +++S+I G A +G EA+++F +M+N+G
Sbjct: 184 YIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGF 243
Query: 214 RPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAY 273
RP VGVL AC+ G ++LG M R+ + + ++D+ ++ GR + A+
Sbjct: 244 RPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTA-LIDMYAKCGRMDSAW 302
Query: 274 DFITNMKIAPDHIMLGSLLSACKIHGKLQ----LGEQIAKRLLDCRSADSGTYVLLSNAY 329
+ M+ D ++ + +S + G ++ L Q+ K ++ D T+V L A
Sbjct: 303 EVFRGMR-KKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIE---PDGNTFVGLLCAC 358
Query: 330 ASSGKWKEAVQIRAKMK--------------------EAGVQKEP----GCSSIEVNNEI 365
+G E Q M+ AG E +E N +
Sbjct: 359 THAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIV 418
Query: 366 HEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLA 425
+LG R + Q+ + + LKQ++ LE + V+L +I +W A +
Sbjct: 419 WGALLGGCRLHRDTQLVEGV--LKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIM 476
Query: 426 ICYGLISTKPYTTIRV 441
G+ Y+ I V
Sbjct: 477 SERGIKKVPGYSWIEV 492
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/487 (46%), Positives = 316/487 (64%), Gaps = 27/487 (5%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H ++K G + R LV +Y C C D + V
Sbjct: 246 GGAVHASMVKFGFEEDPHVRNTLVHMYCCC---------------CQDGSSGPV------ 284
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+A +VF VKD+V W+AMI G R G ARA+ LFREMQ V P+E+T+V
Sbjct: 285 ------SAKKVFDESPVKDSVTWSAMIGGYARAGNSARAVTLFREMQVTGVCPDEITMVS 338
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLSAC+ LGALELG+W+ SY+ + I + + ALI+M+++CGD+D+A++VF EMK R
Sbjct: 339 VLSACADLGALELGKWLESYIERKNIMRSVELCNALIDMFAKCGDVDRAVKVFREMKVRT 398
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++ S+I GLAMHGR +EAV +F EM+ QG+ P V F+GVL+ACSH GLVD G F
Sbjct: 399 IVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAFIGVLSACSHSGLVDKGHYYFN 458
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+M + I P+IEHYGC+VD+LSR GR EA +F+ M + P+ ++ S+++AC G+L
Sbjct: 459 TMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAMPVEPNQVIWRSIVTACHARGEL 518
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LGE +AK L+ + YVLLSN YA +W++ ++R M G++K PG + IE+
Sbjct: 519 KLGESVAKELIRREPSHESNYVLLSNIYAKLLRWEKKTKVREMMDVKGMRKIPGSTMIEM 578
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
NNEI+EF+ GD H Q ++IY+ ++E+ + +K GY P+T VL DI++ +KE AL HS
Sbjct: 579 NNEIYEFVAGDKSHDQYKEIYEMVEEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYRHS 638
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI + L+ST P T IR+VKNLRVC DCHS K I+ + R+I+VRDRNRFHHF+NG
Sbjct: 639 EKLAIAFALLSTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGL 698
Query: 482 CSCGDYW 488
CSCGD+W
Sbjct: 699 CSCGDFW 705
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 136/303 (44%), Gaps = 34/303 (11%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
+IH +LKLGL N L L + F +A+ + ND + ++ +
Sbjct: 140 QIHSLILKLGLHHNP---LVLTKFAATSSHF-NAVHYASSVLFPNDQTTPPPSHDAFLFN 195
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
L+ AF + K AL + M+R V PN+ T VL
Sbjct: 196 TLIR-AFAQTTHSK--------------------PHALRFYNTMRRHAVSPNKFTFPFVL 234
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC------GDIDKALQVFEEM 177
AC+ + LELG +H+ M K + + V L++MY C G + A +VF+E
Sbjct: 235 KACAGMMRLELGGAVHASMVKFGFEEDPHVRNTLVHMYCCCCQDGSSGPVS-AKKVFDES 293
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
+D T++++I G A G S AV +FREM G+ P ++T V VL+AC+ G ++LG
Sbjct: 294 PVKDSVTWSAMIGGYARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGALELG- 352
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
+ +S I +E ++D+ ++ G + A MK+ + S++ +
Sbjct: 353 KWLESYIERKNIMRSVELCNALIDMFAKCGDVDRAVKVFREMKVR-TIVSWTSMIVGLAM 411
Query: 298 HGK 300
HG+
Sbjct: 412 HGR 414
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/488 (45%), Positives = 334/488 (68%), Gaps = 1/488 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
E ++IH ++K+G S T L+ +Y K G+ K A LFD++ + D V+ MI+ Y
Sbjct: 136 ETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQ-RDTVSWNSMIDGY 194
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ G +E A+E+F+ + ++ + WT+MI G V G+ AL+LF MQ ++ + V +V
Sbjct: 195 TKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALV 254
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
L AC+ LG L+ G+WIH+Y+ KH I+++ I+G LI+MY++CGD+++A++VF +M+E+
Sbjct: 255 STLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEK 314
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
V+ + ++I+G A+HGR EA+E F +M G+ P ++TF G+L ACSH GLV +F
Sbjct: 315 GVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLF 374
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+SM R +G +P IEHYGC+VDLL R G +EA + I NM + P+ + G+LL+AC IHG
Sbjct: 375 ESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGN 434
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
L+LG+QI K L+ G Y+ L++ +A++G+W +A ++R +MKE GV K PGCS I
Sbjct: 435 LELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVIS 494
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
VN HEF+ GD HPQ ++I ++++ + ++ EGY P +L D+ED EKE A+ H
Sbjct: 495 VNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETAIHHH 554
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LA+ +GLISTKP TIR+VKNLRVC DCH++IKLI+ + R+I++RDR RFH F++G
Sbjct: 555 SEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDG 614
Query: 481 TCSCGDYW 488
C+CGDYW
Sbjct: 615 NCTCGDYW 622
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 146/334 (43%), Gaps = 69/334 (20%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
E R+IHGQ+LK GL + DE+P AS ++ C
Sbjct: 33 ELRQIHGQMLKTGL-------------------------ILDEIP------ASKLLAFCA 61
Query: 61 VEH-GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
+ G + A VF R+ +T W MI G + E AL L+ M +V N T
Sbjct: 62 SPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTF 121
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYS----------------- 162
+L ACS + ALE + IH+++ K +L+N+YS
Sbjct: 122 PFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQ 181
Query: 163 --------------RCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM 208
+CG+I+ A ++F M ER++ ++ S+I+G G+ EA+ +F M
Sbjct: 182 RDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRM 241
Query: 209 INQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR-DYGIEPQIEHYGCI-VDLLSRV 266
GI+ V V L AC+ G++D G I + + + I+P + GC+ +D+ ++
Sbjct: 242 QTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPIL---GCVLIDMYAKC 298
Query: 267 GRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
G EEA + M+ + +++S IHG+
Sbjct: 299 GDLEEAIEVFRKMEEKGVSVWT-AMISGYAIHGR 331
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/488 (45%), Positives = 334/488 (68%), Gaps = 1/488 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
E ++IH ++K+G S T L+ +Y K G+ K A LFD++ + D V+ MI+ Y
Sbjct: 136 ETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQ-RDTVSWNSMIDGY 194
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ G +E A+E+F+ + ++ + WT+MI G V G+ AL+LF MQ ++ + V +V
Sbjct: 195 TKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALV 254
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
L AC+ LG L+ G+WIH+Y+ KH I+++ I+G LI+MY++CGD+++A++VF +M+E+
Sbjct: 255 STLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEK 314
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
V+ + ++I+G A+HGR EA+E F +M G+ P ++TF G+L ACSH GLV +F
Sbjct: 315 GVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLF 374
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+SM R +G +P IEHYGC+VDLL R G +EA + I NM + P+ + G+LL+AC IHG
Sbjct: 375 ESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGN 434
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
L+LG+QI K L+ G Y+ L++ +A++G+W +A ++R +MKE GV K PGCS I
Sbjct: 435 LELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVIS 494
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
VN HEF+ GD HPQ ++I ++++ + ++ EGY P +L D+ED EKE A+ H
Sbjct: 495 VNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETAIHHH 554
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LA+ +GLISTKP TIR+VKNLRVC DCH++IKLI+ + R+I++RDR RFH F++G
Sbjct: 555 SEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDG 614
Query: 481 TCSCGDYW 488
C+CGDYW
Sbjct: 615 NCTCGDYW 622
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 145/334 (43%), Gaps = 69/334 (20%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
E R+IHGQ+LK GL + DE+P AS ++ C
Sbjct: 33 ELRQIHGQMLKTGL-------------------------ILDEIP------ASKLLAFCA 61
Query: 61 VEH-GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
+ G + A VF R+ +T W MI G + E AL L+ M +V N T
Sbjct: 62 SPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTF 121
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYS----------------- 162
+L ACS + A E + IH+++ K +L+N+YS
Sbjct: 122 PFLLKACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQ 181
Query: 163 --------------RCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM 208
+CG+I+ A ++F M ER++ ++ S+I+G G+ EA+ +F M
Sbjct: 182 RDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRM 241
Query: 209 INQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR-DYGIEPQIEHYGCI-VDLLSRV 266
GI+ V V L AC+ G++D G I + + + I+P + GC+ +D+ ++
Sbjct: 242 QTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPIL---GCVLIDMYAKC 298
Query: 267 GRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
G EEA + M+ + +++S IHG+
Sbjct: 299 GDLEEAIEVFRKMEEKGVSVWT-AMISGYAIHGR 331
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/487 (44%), Positives = 325/487 (66%), Gaps = 1/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G + HG ++K G + + LV +Y G+ + A +F M DVV+ T MI +
Sbjct: 138 GSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYV-DVVSWTSMIRGFN 196
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G VE+A ++F ++ K+ V W+ MI G +N +A++LF+ +Q VR NE +V
Sbjct: 197 KCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVS 256
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V+S+C+ LGALELG H Y+ K+ + LN I+G AL++MY+RCG IDKA+ VFE++ ERD
Sbjct: 257 VISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERD 316
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
++ +LIAGLAMHG S +++ F M+ G+ P +TF VL+ACSHGGLV+ GF+IF+
Sbjct: 317 TLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFE 376
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM RD+ +EP++EHYGC+VDLL R G+ EEA F+ M + P+ + G+LL AC+IH
Sbjct: 377 SMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNA 436
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++GE++ K L+ SG YVLLSN YA++ +W++ ++R MK G++K PG S IE+
Sbjct: 437 EIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIEL 496
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ +H+F +GD HP+ ++I + +E+ ++ GY +T L DI++ EKE AL HS
Sbjct: 497 DGRVHKFTIGDSSHPEMDKIERMWEEILMRIRAAGYRGNTADALFDIDEEEKESALHRHS 556
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +G++ ++ T IR+VKNLRVC DCH+ KLI+ + R++IVRDRNRFHHF G
Sbjct: 557 EKLAIAFGMMRSEAGTPIRIVKNLRVCEDCHTATKLISKVFGRELIVRDRNRFHHFRQGL 616
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 617 CSCMDYW 623
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/503 (43%), Positives = 327/503 (65%), Gaps = 16/503 (3%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN------------- 48
GRE+H V+K GL SN L+ +Y CG A +FD + +
Sbjct: 133 GRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNR 192
Query: 49 ---DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
DV++ T ++ +V G V+ A + F ++ +D V WTAMIDG +R AL LFR
Sbjct: 193 IKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFR 252
Query: 106 EMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG 165
EMQ ++P+E T+V VL+AC+QLGALELG WI +Y+ K+++ + VG ALI+MY +CG
Sbjct: 253 EMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCG 312
Query: 166 DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
+++ AL +F + +RD T+ +++ GLA++G EA+ MF +M+ + P +VT+VGVL+
Sbjct: 313 NVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLS 372
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDH 285
AC+H G+VD G + F SMT +GIEP I HYGC+VDLL + G +EA++ I NM + P+
Sbjct: 373 ACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNS 432
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
I+ G+LL AC+IH ++ E+ +++L+ + YVL N YA+ KW + ++R M
Sbjct: 433 IVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVM 492
Query: 346 KEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVL 405
+ G++K PGCS IE+N +HEF+ GD HPQ ++IY K+ ++ +K+ GYSP+T V
Sbjct: 493 MDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLNKMTSDLKIAGYSPNTSEVF 552
Query: 406 HDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRK 465
DI + +KE A+ HSE+LAI +GLI++ P TIR+VKNLR+C DCH + KL++ + R+
Sbjct: 553 LDIAEEDKENAVYRHSEKLAIAFGLINSGPGVTIRIVKNLRMCIDCHHVAKLVSKVYDRE 612
Query: 466 IIVRDRNRFHHFENGTCSCGDYW 488
+IVRDR RFHHF +G+CSC DYW
Sbjct: 613 VIVRDRTRFHHFRHGSCSCKDYW 635
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 136/303 (44%), Gaps = 34/303 (11%)
Query: 47 CNDVVASTVM-INCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
CN ++ + ++ C E G + A ++F + W M G R + L+
Sbjct: 44 CNPIIQNKILSFCCSREFGDMCYARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYL 103
Query: 106 EMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG 165
EM NV+P+ T + ++ AL+LGR +H ++ K+ +D N ALINMYS CG
Sbjct: 104 EMLERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCG 163
Query: 166 DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
ID A +F+ + DV T+N++I+G I+ +++ ++
Sbjct: 164 LIDMARGIFDMSCKSDVVTWNAMISGY------------------NRIKKDVISWTAIVT 205
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEH--YGCIVDLLSRVGRPEEAYDFITNM---K 280
+ G VD + F M P+ +H + ++D R+ +EA M K
Sbjct: 206 GFVNTGQVDAARKYFHKM-------PERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSK 258
Query: 281 IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV--LLSNAYASSGKWKEA 338
I PD + S+L+AC G L+LGE I + +D + T+V L + Y G + A
Sbjct: 259 IKPDEFTMVSVLTACAQLGALELGEWI-RTYIDKNKVKNDTFVGNALIDMYFKCGNVEMA 317
Query: 339 VQI 341
+ I
Sbjct: 318 LSI 320
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/488 (44%), Positives = 322/488 (65%), Gaps = 1/488 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG++IH VLK G ++ + L+ +Y + A ++FD MP+ DVV+ T +I Y
Sbjct: 138 EGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQ-RDVVSWTSLITGY 196
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ G V+ A EVF + +++V W AMI V++ + A LF M+ +NV ++
Sbjct: 197 SQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAA 256
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+LSAC+ LGALE G+WIH Y+ K I+L+ + +I+MY +CG ++KA +VF E+ ++
Sbjct: 257 SMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQK 316
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
++++N +I GLAMHG+ A+E+F+EM + + P +TFV VL+AC+H GLV+ G F
Sbjct: 317 GISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYF 376
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
Q MT G++P +EH+GC+VDLL R G EEA I M + PD +LG+L+ AC+IHG
Sbjct: 377 QYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGN 436
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+LGEQI K++++ +SG YVLL+N YAS+G+W++ ++R M + GV+K PG S IE
Sbjct: 437 TELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIE 496
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+ + EFI G HPQ ++IY K+ E+ + ++ GY P T+ VLHDI++ EKE L H
Sbjct: 497 SESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYH 556
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI +GL+ TKP T+R+ KNLR+C DCH KLI+ + R+II+RDRNRFHHF G
Sbjct: 557 SEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMG 616
Query: 481 TCSCGDYW 488
CSC DYW
Sbjct: 617 GCSCKDYW 624
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 164/383 (42%), Gaps = 72/383 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVEL--YGKCGEFKDAMQLFDEMPECNDVVASTVMIN 58
E ++ H Q+++LGL ++ ++++ K G+ A+++FD++P + + +T+
Sbjct: 35 ELKQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYNTI-FR 93
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVT 118
Y+ L N ++SR M +V PN+ T
Sbjct: 94 GYLRWQLARNCIFMYSR-------------------------------MLHKSVSPNKFT 122
Query: 119 IVCVLSACSQLGALELGRWIHSYM-----GKHRIDLNHIV-------------------- 153
++ AC A+E G+ IH+++ G LN+++
Sbjct: 123 YPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMP 182
Query: 154 ------GGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
+LI YS+ G +DKA +VFE M ER+ ++N++IA R EA +F
Sbjct: 183 QRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDR 242
Query: 208 MINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
M + + K +L+AC+ G ++ G I + + GIE + ++D+ + G
Sbjct: 243 MRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKS-GIELDSKLATTVIDMYCKCG 301
Query: 268 ---RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVL 324
+ E ++ + I+ + M+G L K ++L +++ + ++ + D T+V
Sbjct: 302 CLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMV---APDGITFVN 358
Query: 325 LSNAYASSGKWKEAVQIRAKMKE 347
+ +A A SG +E M E
Sbjct: 359 VLSACAHSGLVEEGKHYFQYMTE 381
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINM--YSRCGDIDKALQVFEEMKER 180
L +CS + L + HS + + + ++ G +I S+ GD++ AL+VF+++
Sbjct: 27 LDSCSTMAEL---KQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHP 83
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
D YN++ G + + M+ M+++ + P K T+ ++ AC
Sbjct: 84 DAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRAC 130
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/473 (47%), Positives = 315/473 (66%), Gaps = 6/473 (1%)
Query: 22 LKLVELYGKCGEFKDAM--QLFDEMPECNDVVAS----TVMINCYVEHGLVENAFEVFSR 75
+ L+ + CG DA Q E E ++ S T +++ Y + G ++ A +F R
Sbjct: 273 VTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDR 332
Query: 76 VKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELG 135
+ +D V W+AMI G ++ AL +F EMQ V PN+VT+V VLSAC+ LGALE G
Sbjct: 333 MHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETG 392
Query: 136 RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMH 195
+W+HSY+ + + L I+G AL++ Y++CG I A++ FE M R+ T+ +LI G+A +
Sbjct: 393 KWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASN 452
Query: 196 GRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEH 255
GRS EA+E+F M+ I PT VTF+GVL ACSHG LV+ G F SMT+DYGI P+IEH
Sbjct: 453 GRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEH 512
Query: 256 YGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR 315
YGC+VDLL R G +EAY FI NM I P+ ++ +LLSAC +H +++GE+ K+++
Sbjct: 513 YGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKNVEIGEEALKQIVPLD 572
Query: 316 SADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRH 375
SG Y+LLSN YAS G+WK A +R +MKE GV+K PGCS IE+ I EF D H
Sbjct: 573 PCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKIPGCSLIELEGTIFEFFAEDSEH 632
Query: 376 PQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKP 435
PQ +IY+K+ E+ + +K+ GY P+T D++++EK+ +++ HSE+LAI +GL+ ++P
Sbjct: 633 PQLTEIYEKVHEMIENIKMVGYIPNTADARLDVDEYEKQVSVSHHSEKLAIAFGLMKSRP 692
Query: 436 YTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
TIR+ KNLRVC DCHS KLI+ + R+IIVRDRNRFHHF++G CSC DYW
Sbjct: 693 GATIRLSKNLRVCIDCHSATKLISKVYNREIIVRDRNRFHHFKDGLCSCNDYW 745
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 173/385 (44%), Gaps = 77/385 (20%)
Query: 8 QVLKLGLRSNRSTRLK--LVELYGKCGEFKDAMQLFDEMPECNDV------VASTV---- 55
++ +LG RS R L+ + + G +DA+ LF EM + V VA+TV
Sbjct: 123 RLFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCS 182
Query: 56 -----------------------------MINCYVEHGLVENAFEVFSRVKVKDTVCWTA 86
+I+ Y G V A +F V+VK + W A
Sbjct: 183 RMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNA 242
Query: 87 MIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHR 146
MI G V+NG+ +++F+ M +EVT++ V +AC +LG LG+WI Y +
Sbjct: 243 MIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKG 302
Query: 147 IDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
+ + + AL++MY++CG++DKA ++F+ M RDV ++++I+G R EA+ +F
Sbjct: 303 MLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFN 362
Query: 207 EMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRV 266
EM + P VT V VL+AC+ G ++ G + S R + + +VD ++
Sbjct: 363 EMQGTEVNPNDVTMVSVLSACAVLGALETG-KWVHSYIRRKDLPLTVILGTALVDFYAKC 421
Query: 267 GRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLS 326
G ++A +M + ++ T+ L
Sbjct: 422 GCIKDAVKAFESMPV-----------------------------------RNTWTWTALI 446
Query: 327 NAYASSGKWKEAVQIRAKMKEAGVQ 351
AS+G+ +EA+++ + M EA ++
Sbjct: 447 KGMASNGRSREALELFSSMLEANIE 471
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 76/179 (42%), Gaps = 22/179 (12%)
Query: 17 NRSTRLKLVELYGKCGEFKDAMQLFDEMPECN----DVVASTVMINCYVEHG-LVENAFE 71
N T L++ G ++A++LF M E N DV V++ C HG LVE
Sbjct: 438 NTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLAC--SHGCLVEEGRR 495
Query: 72 VFSRVKVKDTVC-----WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSAC 126
F+ + +C + M+D L R G + A R M + PN V +LSAC
Sbjct: 496 HFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMP---IEPNAVVWRALLSAC 552
Query: 127 SQLGALELGRWIHSYMGKHRIDLNHIVGGALI---NMYSRCGDIDKALQVFEEMKERDV 182
+ +E+G K + L+ G I N Y+ G A V +EMKE+ V
Sbjct: 553 TVHKNVEIGE----EALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGV 607
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/488 (44%), Positives = 329/488 (67%), Gaps = 2/488 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G + H Q+++ G +++ LV +Y CG A ++F +M DVV+ T M+ Y
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMG-FRDVVSWTSMVAGYC 194
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G+VENA E+F + ++ W+ MI+G +N +A+DLF M+R+ V NE +V
Sbjct: 195 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 254
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V+S+C+ LGALE G + Y+ K + +N I+G AL++M+ RCGDI+KA+ VFE + E D
Sbjct: 255 VISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETD 314
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+++S+I GLA+HG + +A+ F +MI+ G P VTF VL+ACSHGGLV+ G EI++
Sbjct: 315 SLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYE 374
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+M +D+GIEP++EHYGCIVD+L R G+ EA +FI M + P+ +LG+LL ACKI+
Sbjct: 375 NMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNT 434
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++ E++ L+ + SG YVLLSN YA +G+W + +R MKE V+K PG S IE+
Sbjct: 435 EVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEI 494
Query: 362 NNEIHEFILG-DIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+ +I++F +G D +HP+ +I +K +E+ ++L GY +T D+++ EKE ++ +H
Sbjct: 495 DGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMH 554
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI YG++ TKP TTIR+VKNLRVC DCH++ KLI+ + R++IVRDRNRFHHF NG
Sbjct: 555 SEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNG 614
Query: 481 TCSCGDYW 488
CSC DYW
Sbjct: 615 VCSCRDYW 622
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 118/266 (44%), Gaps = 33/266 (12%)
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
L+ A+ +FS+++ + + +I E ++A + +M + + P+ +T ++
Sbjct: 66 LLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIK 125
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
A S++ + +G HS + + + V +L++MY+ CG I A ++F +M RDV +
Sbjct: 126 ASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVS 185
Query: 185 YNSLIAGLAMHGRSIEAVEMFRE-----------MIN--------------------QGI 213
+ S++AG G A EMF E MIN +G+
Sbjct: 186 WTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGV 245
Query: 214 RPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAY 273
+ V V+++C+H G ++ G ++ + + + + + +VD+ R G E+A
Sbjct: 246 VANETVMVSVISSCAHLGALEFGERAYEYVVKSH-MTVNLILGTALVDMFWRCGDIEKAI 304
Query: 274 DFITNMKIAPDHIMLGSLLSACKIHG 299
+ D + S++ +HG
Sbjct: 305 HVFEGLP-ETDSLSWSSIIKGLAVHG 329
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/487 (45%), Positives = 319/487 (65%), Gaps = 1/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++HG+V+ G+ + LV++Y +C + + A +LFD M + VV+ T +++
Sbjct: 164 GMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGM-QVRSVVSWTSLLSGLT 222
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G V+ A ++F R+ +DTV WTAMIDG V+ AL++FREMQ NV +E T+V
Sbjct: 223 RLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVS 282
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V++AC+QLGALE+G W+ YM + I ++ VG ALI+MYS+CG I++AL VF++M RD
Sbjct: 283 VITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRD 342
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
T+ ++I GLA++G EA+EMF MI P +VTF+GVL AC+H GLVD G E F
Sbjct: 343 KFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFL 402
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM Y I P + HYGCI+DL R G+ EA D I M + P+ + G+LL+AC++HG
Sbjct: 403 SMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNS 462
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++GE + +RLL +S Y LLSN YA +W++ ++R + E G++KEPGCS IE+
Sbjct: 463 EIGELVTERLLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKGIKKEPGCSLIEM 522
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N IHEF+ GD HP ++IY K++ + + GY P V ++ + EK+ L HS
Sbjct: 523 NGIIHEFVAGDQSHPMSKEIYCKLESIINDLNNVGYFPDVTEVFVEVAEEEKQKVLFWHS 582
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI + L+S++P T IR+VKNLR+C DCH+ IKLI+ + R+++VRDR RFHHF +G
Sbjct: 583 EKLAIAFALLSSEPNTVIRIVKNLRMCLDCHNAIKLISRLYGREVVVRDRTRFHHFRHGF 642
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 643 CSCKDYW 649
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 107/234 (45%), Gaps = 34/234 (14%)
Query: 79 KDT-VCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ-LGALELGR 136
+DT V W A+I G R A F +M R P VT V VLSAC + G + LG
Sbjct: 106 RDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGM 165
Query: 137 WIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHG 196
+H + + + V AL++MY+ C D++ A ++F+ M+ R V ++ SL++GL G
Sbjct: 166 QVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLG 225
Query: 197 RSI-------------------------------EAVEMFREMINQGIRPTKVTFVGVLN 225
R EA+EMFREM + + T V V+
Sbjct: 226 RVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVIT 285
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM 279
AC+ G +++G + M+R GI+ ++D+ S+ G E A D +M
Sbjct: 286 ACAQLGALEMGEWVRVYMSRQ-GIKMDAFVGNALIDMYSKCGSIERALDVFKDM 338
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 117/252 (46%), Gaps = 8/252 (3%)
Query: 104 FREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSR 163
+ M P+ T +L A ++ + R +H+++ K + N V +L+ Y+
Sbjct: 31 YARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLVTAYAA 90
Query: 164 CGDIDKALQVFEEMKERDV-TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVG 222
GD A + E +ERD +N+LI+G R EA F +M G PT VT+V
Sbjct: 91 GGDGAAARALLSE-RERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVS 149
Query: 223 VLNACSHG-GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKI 281
VL+AC G G V LG ++ + G+ P + +VD+ + E A+ M++
Sbjct: 150 VLSACGKGTGDVLLGMQVHGRVVGS-GVLPDLRVENALVDMYAECADMESAWKLFDGMQV 208
Query: 282 APDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQI 341
+ SLLS G++ + R+ + D+ ++ + + Y + +++EA+++
Sbjct: 209 R-SVVSWTSLLSGLTRLGRVDEARDLFGRMPE---RDTVSWTAMIDGYVQAARFREALEM 264
Query: 342 RAKMKEAGVQKE 353
+M+ + V +
Sbjct: 265 FREMQCSNVSAD 276
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/515 (44%), Positives = 335/515 (65%), Gaps = 33/515 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+++H V K G SN R LV+LY K G A +LFDEM DVV+ +I+ Y
Sbjct: 145 EGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMV-VRDVVSWNTLISGY 203
Query: 61 VEHGLV-------------------------------ENAFEVFSRVKVKDTVCWTAMID 89
G+V E A ++F + +++ V W AMI
Sbjct: 204 CFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIA 263
Query: 90 GLVRNGEMARALDLFREMQRDN-VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRID 148
G +N + A A++LFR+MQ + + PN+VT+V VLSAC+ LGAL+LG+WIH ++ +++I+
Sbjct: 264 GYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIE 323
Query: 149 LNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM 208
+ +G AL +MY++CG + +A VF EM ERDV +++ +I GLAM+G + EA F EM
Sbjct: 324 VGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEM 383
Query: 209 INQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGR 268
I G+ P ++F+G+L AC+H GLVD G E F M + YGI P+IEHYGC+VDLLSR GR
Sbjct: 384 IEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGR 443
Query: 269 PEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNA 328
++A I +M + P+ I+ G+LL C+I+ + GE++ R+L+ S SG+ V L+N
Sbjct: 444 LDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANV 503
Query: 329 YASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQEL 388
YAS G+ +A R +M++ K PGCS IE+NN ++EF +GD HPQ +IY ++EL
Sbjct: 504 YASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIREL 563
Query: 389 KQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVC 448
K +K+ GY P T++V+H+I++ EKE AL+ HSE+LA+ +GLI+T TTIR+VKNLRVC
Sbjct: 564 KWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVC 623
Query: 449 NDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCS 483
NDCH IK+I+ I +R+I+VRDR+RFHHF++G CS
Sbjct: 624 NDCHDAIKIISKIVEREIVVRDRSRFHHFKDGKCS 658
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 157/345 (45%), Gaps = 27/345 (7%)
Query: 23 KLVELYGKCGEFKDAMQLFD--------EMPECNDVVASTVMINCYVEHGLVENAFEVFS 74
K + L +C QLF+ +P + + + I HG + ++ +F+
Sbjct: 23 KTIHLLLRCATQLSMRQLFEIQAQIIASPIPSIDPNIIAVKFIGVSSSHGNLRHSVLIFN 82
Query: 75 R-VKVKDTVCWTAMIDGLVRNGEMARALDLFRE--MQRDNVRPNEVTIVCVLSACSQLGA 131
+ + + A++ ++ + F + + P+E T VL AC+ L
Sbjct: 83 HFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQ 142
Query: 132 LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAG 191
+ G+ +H ++ K+ + N V +L+++Y + G A ++F+EM RDV ++N+LI+G
Sbjct: 143 VLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISG 202
Query: 192 LAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEP 251
G +A +F M+ + + V++ +++ + G ++ ++F++M
Sbjct: 203 YCFSGMVDKARMVFDGMMEKNL----VSWSTMISGYARVGNLEEARQLFENMPMR----- 253
Query: 252 QIEHYGCIVDLLSRVGRPEEAYDFITNMK----IAPDHIMLGSLLSACKIHGKLQLGEQI 307
+ + ++ ++ + +A + M+ +AP+ + L S+LSAC G L LG+ I
Sbjct: 254 NVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWI 313
Query: 308 AKRLLDCRSADSGTYV--LLSNAYASSGKWKEAVQIRAKMKEAGV 350
R + + G ++ L++ YA G EA + +M E V
Sbjct: 314 -HRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDV 357
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/489 (45%), Positives = 316/489 (64%), Gaps = 32/489 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKC--GEFKDAMQLFDEMPECNDVVASTVMINC 59
G+ +HG V+K G + + LV +Y C GE
Sbjct: 29 GKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGE-------------------------- 62
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
G +E A +VF + D+V W+AMI G VR G + A++LFREMQ V P+E+T+
Sbjct: 63 ----GGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITM 118
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V VLSAC+ LGALELG+W+ SY+ K R+ N + ALI+M+++CGD+DKA +F M+E
Sbjct: 119 VSVLSACTGLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRE 178
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
R++ ++ S+I GLAMHGR +EAV +F EM+ G+ P V F+G+L+ACSH GLVD G
Sbjct: 179 RNIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRY 238
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F SM +D+ I P+IEHYGC+VD+L R G +EA F+ M I P+ ++ +L++AC+ HG
Sbjct: 239 FDSMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHG 298
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+L+LGE+I ++L+ YVLLSN YA W++ +IR M G++K PG + I
Sbjct: 299 ELKLGEKITRQLIRNEPMHESNYVLLSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTMI 358
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E++NEI+EF+ GD H Q ++IY+ + E+ + +K GY P+T VL DI+D +KE L
Sbjct: 359 ELDNEIYEFVAGDKSHAQSKEIYEMVDEMGKEMKRAGYMPTTTEVLLDIDDEDKEDTLNR 418
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI + L++T P T IR+VKNLRVC+DCHS K I+ I R+I+VRDRNRFHHF+N
Sbjct: 419 HSEKLAIAFALLNTPPGTLIRIVKNLRVCDDCHSASKFISKIYNREIVVRDRNRFHHFKN 478
Query: 480 GTCSCGDYW 488
G CSC D+W
Sbjct: 479 GLCSCRDFW 487
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 156/349 (44%), Gaps = 67/349 (19%)
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC----GDIDK 169
PN+ T VL AC+ +G L LG+ +H + K V L++MY C G I+
Sbjct: 8 PNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEF 67
Query: 170 ALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH 229
A +VF+EM + D +++++I G GRS +A+ +FREM +G+ P ++T V VL+AC+
Sbjct: 68 ARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTG 127
Query: 230 GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK--------- 280
G ++LG + +S ++ +E ++D+ ++ G ++A + +M+
Sbjct: 128 LGALELG-KWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTS 186
Query: 281 -------------------------IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR 315
+ PD ++ LLSAC G + G KR D
Sbjct: 187 VIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKG----KRYFDSM 242
Query: 316 SADSGT------YVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFI 369
D Y + + +G KEA++ VQ+ P I+ N + +
Sbjct: 243 RKDFSIVPKIEHYGCMVDMLCRAGLVKEALKF--------VQEMP----IDPNPVVWRTL 290
Query: 370 LGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI----EDWEKE 414
+ R ++ +K+ +Q+++ E S V+L +I DWEK+
Sbjct: 291 INACRAHGELKLGEKIT--RQLIRNEPMHESNYVLLSNIYAKMSDWEKK 337
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/487 (44%), Positives = 320/487 (65%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +HG +K+G+ S + L+ LY CGE DA ++FD+ E D+++ MI+ Y+
Sbjct: 289 GRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYL 348
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G +++A +F + KD V W+AMI G ++ + AL LF+EMQ VRP+E +V
Sbjct: 349 RCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVS 408
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+SAC+ L L+LG+WIH+Y+ ++++ +N I+ LI+MY +CG ++ AL+VF M+E+
Sbjct: 409 AISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKG 468
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V+T+N++I GLAM+G +++ MF +M G P ++TF+GVL AC H GLV+ G F
Sbjct: 469 VSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFN 528
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM ++ IE I+HYGC+VDLL R G +EA + I +M +APD G+LL AC+ H
Sbjct: 529 SMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDN 588
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++GE++ ++L+ + G +VLLSN YAS G W ++IR M + GV K PGCS IE
Sbjct: 589 EMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEA 648
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N +HEF+ GD HPQ I + + +K+EGY P+T V DI++ EKE AL HS
Sbjct: 649 NGTVHEFLAGDKTHPQINDIEHMLDVVAAKLKIEGYVPTTSEVSLDIDEEEKETALFRHS 708
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ +GLI+ P T IRV KNLR+CNDCH+++KLI+ R I+VRDR+RFHHF++G
Sbjct: 709 EKLAVAFGLITISPPTPIRVTKNLRICNDCHTVVKLISKAFDRDIVVRDRHRFHHFKHGA 768
Query: 482 CSCGDYW 488
CSC D+W
Sbjct: 769 CSCMDFW 775
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 191/448 (42%), Gaps = 101/448 (22%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCG---------------------------- 32
EGR++H + G + R L+ LY CG
Sbjct: 123 EGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYV 182
Query: 33 ---EFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFS--RVKVKDTVCWTAM 87
E ++A ++F+ MPE N +AS MI + G VE A +F+ R + +D V W+AM
Sbjct: 183 QAGEVEEAERVFEGMPERN-TIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAM 241
Query: 88 IDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRI 147
+ +N AL LF EM+ V +EV +V LSACS++ +E+GRW+H K +
Sbjct: 242 VSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGV 301
Query: 148 DLNHIVGGALINMYSRCGDIDKALQVFEE------------------------------- 176
+ + ALI++YS CG+I A ++F++
Sbjct: 302 EDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFY 361
Query: 177 -MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
M E+DV +++++I+G A H EA+ +F+EM G+RP + V ++AC+H +DL
Sbjct: 362 SMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDL 421
Query: 236 GFEIFQSMTRD-----------------------------YGIEPQ-IEHYGCIVDLLSR 265
G I ++R+ Y +E + + + ++ L+
Sbjct: 422 GKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAM 481
Query: 266 VGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT- 321
G E++ + +MK P+ I +L AC+ G + G ++ ++
Sbjct: 482 NGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIK 541
Query: 322 -YVLLSNAYASSGKWKEAVQIRAKMKEA 348
Y + + +G KEA ++ M A
Sbjct: 542 HYGCMVDLLGRAGLLKEAEELIDSMPMA 569
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 131/308 (42%), Gaps = 27/308 (8%)
Query: 48 NDVVASTVMINCYVEHGLVENAFE----VFSRVKVKDTVCW-TAMIDGLVRNGEMARALD 102
D A++ +IN + H F +F+ ++ +T W T M L +AL
Sbjct: 33 TDPYAASRLIN-FSSHSTTLVPFHYSLRIFNHLRNPNTFTWNTIMRAHLYLQNSPHQALL 91
Query: 103 LFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYS 162
++ + +P+ T +L C+ + GR +H++ D + V L+N+Y+
Sbjct: 92 HYKLFLASHAKPDSYTYPILLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYA 151
Query: 163 RCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFV- 221
CG + A +VFEE D+ ++N+L+AG G EA +F M P + T
Sbjct: 152 VCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGM------PERNTIAS 205
Query: 222 -GVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
++ G V+ IF + G E + + +V + EEA MK
Sbjct: 206 NSMIALFGRKGCVEKARRIFNGVR---GRERDMVSWSAMVSCYEQNEMGEEALVLFVEMK 262
Query: 281 ---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNA----YASSG 333
+A D +++ S LSAC +++G + + D YV L NA Y+S G
Sbjct: 263 GSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVED---YVSLKNALIHLYSSCG 319
Query: 334 KWKEAVQI 341
+ +A +I
Sbjct: 320 EIVDARRI 327
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 214/487 (43%), Positives = 324/487 (66%), Gaps = 1/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G + HGQ+++ G S+ + LV +Y G+ K A +F + C DVV+ T M+ Y+
Sbjct: 132 GIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRI-SCLDVVSWTSMVAGYI 190
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G V +A ++F ++ K+ V W+ MI G +N +A++L+ +Q + V NE +V
Sbjct: 191 KSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVS 250
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V+++C+ LGALELG H Y+ ++++ +N I+G AL++MY+RCG IDKA+ VF+++ RD
Sbjct: 251 VIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRD 310
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
++ +LIAG AMHG + +A+E F M G+ P ++TF VL+ACSHGGLV+ G E+F+
Sbjct: 311 ALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFE 370
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM RDY IEP++EHYGC+VDLL R G+ EA F+ M + P+ + G+LL AC+IH
Sbjct: 371 SMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNS 430
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++ E+ K L++ + SG YVLLSN YA + KW+ IR MKE GV K PG + E+
Sbjct: 431 EIAERAGKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTLFEM 490
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ ++H+F +GD HP+ +QI + +E+ ++L GY+ + + L DI++ EKE + HS
Sbjct: 491 DGKVHKFTIGDKTHPEIQQIERMWEEILGKIRLAGYTGNNDDALFDIDEEEKESNIHRHS 550
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI Y ++ TK + IR+VKNLRVC DCH+ KLI+ + +R++IVRDRNRFHHF+ G
Sbjct: 551 EKLAIAYAIMRTKGHDPIRIVKNLRVCEDCHTATKLISKVYERELIVRDRNRFHHFKGGA 610
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 611 CSCMDYW 617
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 138/282 (48%), Gaps = 33/282 (11%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV A++ +I+ + L++ A +VF +++ + + + I G + + ++ + + +
Sbjct: 46 DVFAASCLISISINKNLLDYAAQVFYQIQNPNLFIYNSFIRGFSGSKDPDKSFHFYVQSK 105
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYS------ 162
R+ + P+ +T ++ AC+Q G+L++G H + +H D + V +L+ MYS
Sbjct: 106 RNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIK 165
Query: 163 -------------------------RCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR 197
+ GD+ A ++F++M E+++ T++ +I+G A +
Sbjct: 166 SASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSF 225
Query: 198 SIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYG 257
+A+E++ + ++G+ + V V+ +C+H G ++LG + R+ + +
Sbjct: 226 FDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILRN-KMTVNLILGT 284
Query: 258 CIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+VD+ +R G ++A ++ + D + +L++ +HG
Sbjct: 285 ALVDMYARCGSIDKAI-WVFDQLPGRDALSWTTLIAGFAMHG 325
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/271 (19%), Positives = 118/271 (43%), Gaps = 37/271 (13%)
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+ L +C+ L L++ IH+++ + + LI++ +D A QVF +++
Sbjct: 19 LSFLESCTTLSHLKI---IHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQN 75
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
++ YNS I G + ++ + + G+ P +T+ ++ AC+ G +D+G +
Sbjct: 76 PNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQA 135
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---------YDFITNMKIAPDHIMLGS 290
+ R +G + + +V + S +G + A D ++ + +I G
Sbjct: 136 HGQIIR-HGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGD 194
Query: 291 LLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
+ SA K+ K+ K L+ T+ ++ + YA + + +A+++ ++ GV
Sbjct: 195 VTSARKLFDKMP-----EKNLV--------TWSVMISGYAKNSFFDKAIELYFLLQSEGV 241
Query: 351 QKE--------PGCS---SIEVNNEIHEFIL 370
C+ ++E+ H++IL
Sbjct: 242 HANETVMVSVIASCAHLGALELGERAHDYIL 272
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 215/485 (44%), Positives = 326/485 (67%), Gaps = 11/485 (2%)
Query: 11 KLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPE-------CNDVVASTVMINCYVEH 63
K + N ST +V + C + +A+ L + M C+++ +I+ Y +
Sbjct: 254 KANVPPNEST---IVSVLSACAQ-SNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKC 309
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
G ++ A E+F + +D + W MI G AL LFREM V P E+T + +L
Sbjct: 310 GDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSIL 369
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
+C+ LGA++LG+WIH+Y+ K+ ++ + +LI++Y++CG+I A QVF+ MK + +
Sbjct: 370 PSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLA 429
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
++N++I GLAMHG++ +A E+F +M + GI P ++TFVG+L+AC H GLVDLG + F SM
Sbjct: 430 SWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSM 489
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQL 303
+DY I P+ +HYGC++DLL R G EEA + NM++ PD + GSLL AC+ HG+++L
Sbjct: 490 VQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVEL 549
Query: 304 GEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNN 363
GE +A+RL + + G YVLLSN YA +GKW + +IR ++ + G++K PGC++IEV+N
Sbjct: 550 GELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDN 609
Query: 364 EIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSER 423
+HEF++GD HPQ E IY+ ++E+ + +K+ G+ T VL+D+++ KE AL+ HSE+
Sbjct: 610 VVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMDEEWKEGALSHHSEK 669
Query: 424 LAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCS 483
LAI +GLISTKP T IR++KNLRVC +CHS KLI+ I R+II RDRNRFHHF++G+CS
Sbjct: 670 LAIAFGLISTKPGTPIRIIKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGSCS 729
Query: 484 CGDYW 488
C DYW
Sbjct: 730 CNDYW 734
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 134/450 (29%), Positives = 227/450 (50%), Gaps = 50/450 (11%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG++IH VLKLG S+ L+ +Y + GE +A +FD+ D ++ T +I Y
Sbjct: 147 EGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQ-SNFRDAISFTALIAGY 205
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G ++ A ++F + VKD V W AMI G + G AL LF +M++ NV PNE TIV
Sbjct: 206 ALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIV 265
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSAC+Q AL+LG + S++ + N + ALI+MYS+CGD+ A ++F++M ER
Sbjct: 266 SVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLER 325
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++N +I G EA+ +FREM+ G+ PT++TF+ +L +C+H G +DLG I
Sbjct: 326 DVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIH 385
Query: 241 QSMTRDYGIE------------------------------PQIEHYGCIVDLLSRVGRPE 270
+ +++ + + ++ L+ G+ +
Sbjct: 386 AYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQAD 445
Query: 271 EAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL-DCR-SADSGTYVLL 325
+A++ + M I P+ I +LSACK G + LG+Q ++ D + S S Y +
Sbjct: 446 KAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCM 505
Query: 326 SNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKM 385
+ +G ++EA + M+ ++ + I +LG R R ++ + +
Sbjct: 506 IDLLGRAGLFEEAESLLQNME------------VKPDGAIWGSLLGACRDHGRVELGELV 553
Query: 386 QELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
E ++ +LE +P V+L +I +W
Sbjct: 554 AE--RLFELEPDNPGAYVLLSNIYAGAGKW 581
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 146/337 (43%), Gaps = 69/337 (20%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYG--KCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
++IH ++K GL + KL+E + G+ A+ LF+ + E N +
Sbjct: 46 KQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFI--------- 96
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
W +MI GL + A AL F M V PN T
Sbjct: 97 -----------------------WNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFP 133
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD-------------- 166
+L +C++L + G+ IH+++ K + + +LINMY++ G+
Sbjct: 134 FLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFR 193
Query: 167 -----------------IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
+D+A Q+F+EM +DV ++N++IAG A GRS EA+ +F +M
Sbjct: 194 DAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMR 253
Query: 210 NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRP 269
+ P + T V VL+AC+ +DLG + +S D G+ ++ ++D+ S+ G
Sbjct: 254 KANVPPNESTIVSVLSACAQSNALDLGNSM-RSWIEDRGLCSNLKLVNALIDMYSKCGDL 312
Query: 270 EEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQL 303
+ A + +M + ++M+G C L L
Sbjct: 313 QTARELFDDMLERDVISWNVMIGGYTHMCSYKEALAL 349
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 7/198 (3%)
Query: 162 SRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFV 221
SR GDI A+ +F ++E ++ +NS+I GL+M A+ F MI G+ P TF
Sbjct: 74 SRSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFP 133
Query: 222 GVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKI 281
+L +C+ G +I + + G + + ++++ ++ G A + +
Sbjct: 134 FLLKSCAKLASAHEGKQIHAHVLK-LGFVSDVFIHTSLINMYAQSGEMNNA-QLVFDQSN 191
Query: 282 APDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQI 341
D I +L++ + G + Q+ + D ++ + YA G+ KEA+ +
Sbjct: 192 FRDAISFTALIAGYALWGYMDRARQLFDEM---PVKDVVSWNAMIAGYAQMGRSKEALLL 248
Query: 342 RAKMKEAGVQKEPGCSSI 359
M++A V P S+I
Sbjct: 249 FEDMRKANV--PPNESTI 264
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 212/487 (43%), Positives = 326/487 (66%), Gaps = 9/487 (1%)
Query: 8 QVLKLGLRSNRSTRLKLVELYGKCGEFKDA------MQLFDEMPECNDVVASTVMINCYV 61
++L+L +R + T LV + CG D + +E + T +++ Y
Sbjct: 215 EMLELDIRFDEVT---LVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYA 271
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G V+ A +F ++ +D V W+AMI G + ALDLF EMQ+ N+ PNE+T+V
Sbjct: 272 KCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVS 331
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+LS+C+ LGALE G+W+H ++ K R+ L +G AL++ Y++CG ++ +++VF +M ++
Sbjct: 332 ILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKN 391
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ LI GLA +G+ +A+E F M+ + + P VTF+GVL+ACSH GLVD G ++F
Sbjct: 392 VLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFV 451
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM+RD+GIEP+IEHYGC+VD+L R G EEA+ FI NM I P+ ++ +LL++CK+H +
Sbjct: 452 SMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNV 511
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++GE+ K+L+ SG Y+LLSN YAS G+W++A+++R +MKE G++K PGCS IE+
Sbjct: 512 EIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIEL 571
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ IHEF D H Q E+IY ++++ + +K GY P+T D E+ +KE +++ HS
Sbjct: 572 DGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYVPNTAEARLDAEEDDKESSVSHHS 631
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GLI + P TTIR+ KNLRVC DCH+ KL++ + R+I+VRDR RFHHF+ G+
Sbjct: 632 EKLAIAFGLIKSPPGTTIRITKNLRVCTDCHNATKLVSKVFNREIVVRDRTRFHHFKEGS 691
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 692 CSCNDYW 698
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 156/340 (45%), Gaps = 65/340 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG +IH ++K G S+ + L+ +Y CGE
Sbjct: 142 EGEQIHALIMKCGFGSHGFVKNTLIHMYANCGE--------------------------- 174
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
VE A VF + ++ W +M G ++G + LF EM ++R +EVT+V
Sbjct: 175 -----VEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLV 229
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL+AC +L LELG WI+ Y+ + + N + +L++MY++CG +D A ++F++M R
Sbjct: 230 SVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRR 289
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG--------- 231
DV ++++I+G + R EA+++F EM I P ++T V +L++C+ G
Sbjct: 290 DVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVH 349
Query: 232 ----------LVDLGFEIFQSMTRDYGIEPQIEHYG-----------CIVDLLSRVGRPE 270
V LG + + +E IE +G ++ L+ G+ +
Sbjct: 350 FFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGK 409
Query: 271 EAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQI 307
+A ++ M + P+ + +LSAC G + G +
Sbjct: 410 KALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDL 449
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 147/312 (47%), Gaps = 36/312 (11%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A +F ++ D+ + MI G A+ LF+EM ++V+P+E T C+L CS+
Sbjct: 77 AVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSR 136
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
L AL G IH+ + K + V LI+MY+ CG+++ A +VF+EM ER+V T+NS+
Sbjct: 137 LQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSM 196
Query: 189 IAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYG 248
AG G E V++F EM+ IR +VT V VL AC ++LG E + G
Sbjct: 197 FAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELG-EWINRYVEEKG 255
Query: 249 IEPQIEHYGCIVDLLSRVG-------------------------------RPEEAYDFIT 277
++ +VD+ ++ G R EA D
Sbjct: 256 LKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFH 315
Query: 278 NMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTY-VLLSNAYASSG 333
M+ I P+ I + S+LS+C + G L+ G+ + + R + T L + YA G
Sbjct: 316 EMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCG 375
Query: 334 KWKEAVQIRAKM 345
+ ++++ KM
Sbjct: 376 SVESSIEVFGKM 387
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 221/487 (45%), Positives = 320/487 (65%), Gaps = 1/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +HG V+K+G+ + + + L+ +Y C E A +LF E C D ++ MI+ YV
Sbjct: 308 GKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSE-SCCLDQISWNSMISGYV 366
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G +E A +F + KD V W+AMI G + L LF+EMQ + +P+E +V
Sbjct: 367 KCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVS 426
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V+SAC+ L AL+ G+WIH+Y+ K+ + +N I+G LINMY + G ++ AL+VF+ ++E+
Sbjct: 427 VISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKG 486
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V+T+N+LI GLAM+G ++++ F EM G+ P ++TFV VL AC H GLVD G F
Sbjct: 487 VSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFN 546
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM +++ I P I+HYGC+VDLL R G +EA + I +M +APD G+LL ACK +G
Sbjct: 547 SMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDN 606
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+ GE+I ++L++ G VLLSN YAS G W + +++R M++ GV K PGCS IE
Sbjct: 607 ETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCSMIEA 666
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ +HEF+ GD HPQ E I + E+ + +KLEGY+P T V DI++ EKE L HS
Sbjct: 667 HGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLEGYAPDTREVSLDIDEEEKETTLFRHS 726
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GLI+ P T IR+VKNLR+CNDCH+ KLI+ R+I+VRDR+RFHHF+ G+
Sbjct: 727 EKLAIAFGLIAIDPPTPIRIVKNLRICNDCHTAAKLISKAFNREIVVRDRHRFHHFKQGS 786
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 787 CSCMDYW 793
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 163/342 (47%), Gaps = 64/342 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLF------------------- 41
+G+ I VLK+G S+ + L+ +Y CG DA ++F
Sbjct: 144 DGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYV 203
Query: 42 ------------DEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMID 89
D MPE N V+AS MI + + G VE A ++F+ +K KD V W+A+I
Sbjct: 204 LVGNVEEAKDVYDRMPERN-VIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALIS 262
Query: 90 GLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDL 149
+N AL LF+EM + + +EV ++ VLSACS+L + G+ +H + K I+
Sbjct: 263 CYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIET 322
Query: 150 NHIVGGALINMYS-------------------------------RCGDIDKALQVFEEMK 178
+ ALI+MYS +CG+I+KA +F+ M
Sbjct: 323 YVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMP 382
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
++D +++++I+G A R E + +F+EM +G +P + V V++AC+H +D G
Sbjct: 383 DKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKW 442
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
I + R G++ I ++++ ++G E+A + ++
Sbjct: 443 I-HAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLE 483
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 146/338 (43%), Gaps = 53/338 (15%)
Query: 18 RSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVK 77
+S ++L E GKC + FD +DV +IN Y G + +A +VF
Sbjct: 134 QSCSIRLAEFDGKCIQDHVLKVGFD-----SDVYIQNTLINMYAVCGNLSDARKVFDGSS 188
Query: 78 VKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRW 137
V D V W +M+ G V G + A D++ M NV
Sbjct: 189 VLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPERNV------------------------- 223
Query: 138 IHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR 197
I ++I ++ + G++++A ++F EMK++D+ ++++LI+ +
Sbjct: 224 --------------IASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEM 269
Query: 198 SIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYG 257
EA+ +F+EM GI +V + VL+ACS +V G ++ + GIE +
Sbjct: 270 YEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITG-KLVHGLVVKVGIETYVNLQN 328
Query: 258 CIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGE-QIAKRLLDCRS 316
++ + S + +T K+ + L + I G ++ GE + A+ L D
Sbjct: 329 ALIHMYS------SCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMP 382
Query: 317 -ADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
D+ ++ + + YA ++ E + + +M+ G + +
Sbjct: 383 DKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPD 420
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 124/288 (43%), Gaps = 22/288 (7%)
Query: 30 KCGEFKDAMQLFDEMPEC---NDVVASTVMINCYVEHGLVE--NAFEVFSRVKVKDTVCW 84
KC K Q+ +M D A++ ++ E + ++++FS ++ +
Sbjct: 35 KCQNIKQFNQILSQMILSGFFKDSFAASRLLKFSTELPFININQSYQIFSHIENPNGFIC 94
Query: 85 TAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGK 144
M+ G ++ +A+ +++ M NV + T + +CS A G+ I ++ K
Sbjct: 95 NTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCIQDHVLK 154
Query: 145 HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEM 204
D + + LINMY+ CG++ A +VF+ D+ ++NS++AG + G EA ++
Sbjct: 155 VGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDV 214
Query: 205 FREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLS 264
+ M + + + V G V+ ++F M + + + ++
Sbjct: 215 YDRMPERNVIASNSMIV----LFGKKGNVEEACKLFNEMK-----QKDLVSWSALISCYE 265
Query: 265 RVGRPEEAYDFITNMK---IAPDHIMLGSLLSACK-----IHGKLQLG 304
+ EEA M I D +++ S+LSAC I GKL G
Sbjct: 266 QNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHG 313
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/487 (43%), Positives = 315/487 (64%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H +L+ G + + LV++YGKC +
Sbjct: 317 GKQLHAYILRNGFSVSLALATALVDMYGKCSD---------------------------- 348
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ NA +F + +D + WTAM+ + + +A +LF +M+ VRP +VTIV
Sbjct: 349 ----IRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVS 404
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+LS C+ GAL+LG+W+HSY+ K R++++ I+ AL++MY++CGDI+ A ++F E RD
Sbjct: 405 LLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRD 464
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ +N++I G AMHG EA+++F EM QG++P +TF+G+L+ACSH GLV G ++F+
Sbjct: 465 ICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFE 524
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M +G+ PQIEHYGC+VDLL R G +EA++ I +M I P+ I+ G+L++AC++H
Sbjct: 525 KMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNP 584
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
QLGE A +LL+ + G VL+SN YA++ +W +A +R MK G++KEPG S IEV
Sbjct: 585 QLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEV 644
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N +HEF++GD HPQ +I + + E+++ + GY P T VL +I++ EKE AL HS
Sbjct: 645 NGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHS 704
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ +GLIST P T IR+VKNLRVCNDCH+ KL++ I R IIVRDRNRFHHF G
Sbjct: 705 EKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGY 764
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 765 CSCGDYW 771
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 146/296 (49%), Gaps = 33/296 (11%)
Query: 50 VVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
V +T +++ Y + G + A ++F+ + K V WTAMI G +R+ + LF MQ
Sbjct: 232 VPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQE 291
Query: 110 DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDK 169
+N+ PNE+T++ ++ C GAL+LG+ +H+Y+ ++ ++ + AL++MY +C DI
Sbjct: 292 ENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRN 351
Query: 170 ALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH 229
A +F+ + RDV + ++++ A +A +F +M G+RPTKVT V +L+ C+
Sbjct: 352 ARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAV 411
Query: 230 GGLVDLGFEIFQSMTRDY------------------------------GIEPQIEHYGCI 259
G +DLG + + ++ I I + I
Sbjct: 412 AGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAI 471
Query: 260 VDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
+ + G EEA D M+ + P+ I LL AC G + G+++ ++++
Sbjct: 472 ITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMV 527
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 153/341 (44%), Gaps = 67/341 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIHG VLK GL + L+ +YG+C
Sbjct: 113 GKEIHGFVLKKGLDRDVFVGNALMLMYGECA----------------------------- 143
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
VE A VF ++ +D V W+ MI L RN E AL+L REM VRP+EV +V
Sbjct: 144 ---CVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVS 200
Query: 122 VLSACSQLGALELGRWIHSYMGKHRID--LNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+++ + + +G+ +H+Y+ ++ + + AL++MY++CG + A Q+F + +
Sbjct: 201 MVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQ 260
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+ V ++ ++IAG R E ++F M + I P ++T + ++ C G + LG ++
Sbjct: 261 KTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQL 320
Query: 240 FQSMTRD---------------YGIEPQIEHYGCIVD------------LLSRVGRP--- 269
+ R+ YG I + + D +LS +
Sbjct: 321 HAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCI 380
Query: 270 EEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQI 307
++A++ M+ + P + + SLLS C + G L LG+ +
Sbjct: 381 DQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWV 421
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 103/234 (44%), Gaps = 51/234 (21%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL AC Q+ +LG+ IH ++ K +D + VG AL+ MY C ++ A VF++M ERD
Sbjct: 100 VLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERD 159
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN---------------- 225
V +++++I L+ + A+E+ REM +RP++V V ++N
Sbjct: 160 VVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHA 219
Query: 226 ------------------------ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVD 261
C H GL ++F +T+ + GCI
Sbjct: 220 YVIRNSNNEHMGVPTTTALLDMYAKCGHLGLAR---QLFNGLTQKTVVSWTAMIAGCI-- 274
Query: 262 LLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
R R EE M+ I P+ I + SL+ C G LQLG+Q+ +L
Sbjct: 275 ---RSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYIL 325
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/488 (45%), Positives = 314/488 (64%), Gaps = 33/488 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKC-GEFKDAMQLFDEMPECNDVVASTVMINCY 60
G+ +HG ++K G + + +V +Y C G + A +LFDEMP+
Sbjct: 128 GKAVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKL------------- 174
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
D V WTAMI G R G+ A A+ LFR+MQ V P++VT+V
Sbjct: 175 -------------------DPVTWTAMIGGYARLGQSAGAVGLFRKMQIAGVCPDDVTMV 215
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSAC+ LGALELG+WI SY+ K R+ + AL++M+++CGD+DKAL +F M +R
Sbjct: 216 SVLSACTDLGALELGKWIESYIEKERVLKTVELSNALVDMFAKCGDVDKALGLFRNMSKR 275
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+ ++ S+I GLAMHGR +EAV +F EM G+ P + F+G+L+ACSH GLV+ G + F
Sbjct: 276 TIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLSACSHSGLVERGRQYF 335
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
MTR +GI P+IEHYGC+VDLLSR G EA +F+ M I P+ I+ +L+SAC++HG+
Sbjct: 336 SEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIWRTLISACRVHGE 395
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
L+LGE I+K+L+ YVLLSN Y W++ +IR M + G+QK PG + IE
Sbjct: 396 LKLGESISKQLIRNEPMHESNYVLLSNIYGKMLDWEKKSKIRVAMGKKGIQKVPGSTMIE 455
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
++NEIHEFI+GD H Q +I K + E+ + +K GY+P+T V DI++ +KE AL+ H
Sbjct: 456 LDNEIHEFIVGDRSHNQYNEIIKMVNEMGREMKRAGYAPTTTEVFLDIDEEDKEDALSRH 515
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI + L++T P + IR+ KNLRVC DCHS K I+ I R+I++RDR+RFHHF +G
Sbjct: 516 SEKLAIAFALLNTPPGSPIRITKNLRVCGDCHSASKFISKIYNREIVMRDRSRFHHFRDG 575
Query: 481 TCSCGDYW 488
CSCGD+W
Sbjct: 576 QCSCGDFW 583
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 128/278 (46%), Gaps = 32/278 (11%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
++H ++KLG ++N K F A D +P +V S
Sbjct: 25 QLHTHIIKLGFQNNPLVLTK----------FTSASSNLDAIPYAMSLVFS---------- 64
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMA-RALDLFREMQRDNVRPNEVTIVCV 122
VE+A +V D ++ +I + + A+ + M + PN+ V
Sbjct: 65 --VEDA-------RVYDAFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFV 115
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC-GDIDKALQVFEEMKERD 181
L AC+ L L LG+ +H + K D + V +++MY C G ++ A ++F+EM + D
Sbjct: 116 LKACAGLRDLNLGKAVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLD 175
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
T+ ++I G A G+S AV +FR+M G+ P VT V VL+AC+ G ++LG I +
Sbjct: 176 PVTWTAMIGGYARLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWI-E 234
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM 279
S + +E +VD+ ++ G ++A NM
Sbjct: 235 SYIEKERVLKTVELSNALVDMFAKCGDVDKALGLFRNM 272
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/491 (45%), Positives = 321/491 (65%), Gaps = 9/491 (1%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDA------MQLFDEMPECNDVVASTVMI 57
E+ +L++G+ + T LV + CG DA + DE + T +I
Sbjct: 206 EMFKGMLEVGVAFDEIT---LVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALI 262
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y + G + A +F ++ +D V W+AMI G + + AL LF EMQ V PN+V
Sbjct: 263 DMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDV 322
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T+V VLSAC+ LGALE G+W+HSY+ + R+ L I+G AL++ Y++CG ID A++ FE M
Sbjct: 323 TMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESM 382
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
++ T+ +LI G+A +GR EA+E+F M I PT VTF+GVL ACSH LV+ G
Sbjct: 383 PVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGR 442
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F SMT+DYGI+P+ EHYGC+VDLL R G +EAY FI M I P+ ++ +LLS+C +
Sbjct: 443 RHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAV 502
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
H +++GE+ K+++ + SG Y+LLSN YAS G+WK A IR +MK+ G++K PGCS
Sbjct: 503 HKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCS 562
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IE++ + EF D HPQ ++IY+K++E+ +K+ GY P+T V ++++ EKE ++
Sbjct: 563 LIELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNTADVRLEVDEHEKEVSV 622
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
+ HSE+LAI +GL+ P TIR+ KNLRVC DCHS KLI+ + R+I+VRDRNRFHHF
Sbjct: 623 SHHSEKLAIAFGLMKLDPGATIRLSKNLRVCTDCHSATKLISKVYNREIVVRDRNRFHHF 682
Query: 478 ENGTCSCGDYW 488
++GTCSC DYW
Sbjct: 683 KDGTCSCNDYW 693
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 158/351 (45%), Gaps = 68/351 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR I +K GL ++R L+ +Y C + A LFD + E
Sbjct: 138 GRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEE--------------- 182
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
V W A+I ++NG +++F+ M V +E+T+V
Sbjct: 183 -----------------NGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVS 225
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V++AC ++G +LG+W+ Y+ + + N + ALI+MY++CG++ KA ++F+ M+ RD
Sbjct: 226 VVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRD 285
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++++I+G + EA+ +F EM + P VT V VL+AC+ G ++ G +
Sbjct: 286 VVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETG-KWVH 344
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
S R + I +VD ++ G ++A + +M +
Sbjct: 345 SYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPV-------------------- 384
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
+S T+ L A++G+ +EA+++ + M++A ++
Sbjct: 385 ---------------KNSWTWTALIKGMATNGRGREALELFSSMRKASIEP 420
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 38/212 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H + + L LV+ Y KCG DA++ F+ MP
Sbjct: 340 GKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMP---------------- 383
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
VK++ WTA+I G+ NG AL+LF M++ ++ P +VT +
Sbjct: 384 ----------------VKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIG 427
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VL ACS +E G R S + I G ++++ R G ID+A Q M E
Sbjct: 428 VLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIE 487
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ 211
+ + +L++ A+H + VE+ E + Q
Sbjct: 488 PNAVIWRALLSSCAVH----KNVEIGEEALKQ 515
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/550 (42%), Positives = 330/550 (60%), Gaps = 62/550 (11%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEF------------KD------------ 36
EG++IHG LK+G S+ + LV +Y KCGE KD
Sbjct: 130 EGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYA 189
Query: 37 -------AMQLFDEMPE------------------------------CNDVVASTVMINC 59
A+QLF+EMPE C ++V+ MIN
Sbjct: 190 RCGEIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMING 249
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
Y++ G ++A E+F ++ + D V W MI G NG+ A+ +F M + RP+ T+
Sbjct: 250 YMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATL 309
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V VLSA S L L GRWIHSYM K+ +L+ I+G +LI MY++CG I+ AL VF +++
Sbjct: 310 VSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQK 369
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+ V + ++I GL +HG + A+ +F EM G++P + F+GVLNAC+H GLVD G +
Sbjct: 370 KKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQY 429
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F M +Y IEP +EHYGC+VD+L R G EEA + I NM I+P+ ++ SLL + HG
Sbjct: 430 FDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHG 489
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
K+ +GE A+R+++ G Y+LLSN YA+SG W++ +R M + G +K+PGCSS+
Sbjct: 490 KIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSV 549
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIE-DWEKEWALA 418
E +HEFI+GDI HPQ ++IY KM E+K+ +K G+ P T VL IE + EKE L
Sbjct: 550 EHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKEKEAELE 609
Query: 419 IHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFE 478
HSERLAI +GLI+ KP IR++KNLRVCNDCHS+ KL++ I R+IIVRD RFHHF+
Sbjct: 610 NHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFK 669
Query: 479 NGTCSCGDYW 488
NG+CSC DYW
Sbjct: 670 NGSCSCMDYW 679
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 142/304 (46%), Gaps = 23/304 (7%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A +F R++ + + W +I V N + LF E+ + + P+ T+ CV+ C++
Sbjct: 66 ARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCAR 124
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
LG ++ G+ IH K + V G+L+NMYS+CG+ID A +VF+ M ++DV +NSL
Sbjct: 125 LGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSL 184
Query: 189 IAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYG 248
I G A G A+++F EM + ++ +++ S G V+ ++F M
Sbjct: 185 IDGYARCGEIDIALQLFEEMPER----DAFSWTVLVDGLSKCGKVESARKLFDQMPCR-- 238
Query: 249 IEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK-------- 300
+ + +++ + G + A + M I D + +++ +++G+
Sbjct: 239 ---NLVSWNAMINGYMKSGDFDSALELFYQMPIW-DLVTWNLMIAGYELNGQFMDAVKMF 294
Query: 301 ---LQLGEQIA-KRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGC 356
L+LG + + L+ SA SG VL + S K ++ + + ++ C
Sbjct: 295 FMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKC 354
Query: 357 SSIE 360
IE
Sbjct: 355 GCIE 358
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/488 (44%), Positives = 322/488 (65%), Gaps = 3/488 (0%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQL---FDEMPECNDVVASTVMINCY 60
E+ +L++G+ + T + +V G+ G+ K + DE + T +++ Y
Sbjct: 207 EMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMY 266
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ G + A +F ++ +D V W+AMI G + + AL LF EMQ V PN+VT+V
Sbjct: 267 AKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMV 326
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSAC+ LGALE G+W+HSY+ + R+ L I+G AL++ Y++CG ID A++ FE M +
Sbjct: 327 SVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVK 386
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+ T+ +LI G+A +GR EA+E+F M GI PT VTF+GVL ACSH LV+ G F
Sbjct: 387 NSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHF 446
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM RDYGI+P++EHYGC+VDLL R G +EAY FI M I P+ ++ +LLS+C +H
Sbjct: 447 DSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRN 506
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+ +GE+ K+++ + SG YVLLSN YAS+G+WK+A +R +MK+ G++K PGCS IE
Sbjct: 507 VGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLIE 566
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
++ + EF D HP+ +IY+K++E+ +K+ GY P+T V ++E+ EKE +++ H
Sbjct: 567 LDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNTADVRLEVEEREKEVSVSHH 626
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI +GL+ P TIR+ KNLRVC DCHS KLI+ + R+I+VRDRN FHHF++G
Sbjct: 627 SEKLAIAFGLMKLDPGATIRLSKNLRVCADCHSATKLISKVYDREIVVRDRNIFHHFKDG 686
Query: 481 TCSCGDYW 488
TCSC DYW
Sbjct: 687 TCSCNDYW 694
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 159/351 (45%), Gaps = 68/351 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR + +K GL ++R L+ +Y CG+ A +FD E
Sbjct: 139 GRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESG------------- 185
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
V W A++ ++NG+ +++F+ M V +EVT+V
Sbjct: 186 -------------------VVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVS 226
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V++AC ++G +LG+W+ ++ + + N + AL++MY++CG+I KA ++F+ M+ RD
Sbjct: 227 VVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRD 286
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++++I+G + EA+ +F EM + P VT V VL+AC+ G ++ G +
Sbjct: 287 VVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETG-KWVH 345
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
S R + +VD ++ G ++A + +M +
Sbjct: 346 SYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPV-------------------- 385
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
+S T+ L A++G+ +EA+++ + M+EAG++
Sbjct: 386 ---------------KNSWTWTALIKGMATNGRGREALELFSSMREAGIEP 421
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/488 (44%), Positives = 306/488 (62%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+E+H Q++K+GL L++LY CG A +FDEMPE
Sbjct: 125 EGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPE-------------- 170
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
D+ W+ M+ G +NG+ AL LFREMQ +NV + T+
Sbjct: 171 ------------------PDSASWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLA 212
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+ C LGAL+LG+W+HSYM K + ++ ++G AL+ MYS+CG +D AL+VF+ M ER
Sbjct: 213 SVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAER 272
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DVT ++++IAG A+HG +A+++F M P VTF VL+ACSH GLV+ G +IF
Sbjct: 273 DVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIF 332
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
++M +Y I PQI+HYGC+VDL R G A+ FI M I P+ ++ +LL ACK HG
Sbjct: 333 ETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGY 392
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
LGE I++++L + YVL+SN YAS G+W Q+R+ MK+ +K+ G SSIE
Sbjct: 393 KDLGEHISRKILKLDPSSPENYVLVSNVYASLGRWSSVCQVRSLMKDKAPKKQHGWSSIE 452
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+N +H+FI+GD HP+RE+IY + ++ + +K G+ ST VLHDI++ EKE+AL +H
Sbjct: 453 INFMVHKFIMGDESHPEREKIYGMLHQMARKLKQVGHVNSTVDVLHDIDEEEKEYALGLH 512
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLAI YGL+ T + IR+VKNLRVC DCH +IKLI+ + R+IIVRDR RFHHF
Sbjct: 513 SERLAIAYGLLHTPNGSPIRIVKNLRVCRDCHEVIKLISEVYNREIIVRDRVRFHHFRER 572
Query: 481 TCSCGDYW 488
CSC DYW
Sbjct: 573 GCSCNDYW 580
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 169/378 (44%), Gaps = 29/378 (7%)
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
G V A +FS + W +I G + A+ L+R+M + PN T VL
Sbjct: 55 GHVAYAHRIFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVL 114
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
AC +L L G+ +HS + K +D + LI +Y+ CG +D A +F+EM E D
Sbjct: 115 KACCKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSA 174
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
+++++++G A +G+++EA+++FREM + + T V+ C G +DLG + M
Sbjct: 175 SWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYM 234
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG---- 299
++ G++ + +V + S+ G + A M D ++++ IHG
Sbjct: 235 DKE-GVKIDVVLGTALVGMYSKCGSLDNALKVFQGMA-ERDVTAWSTMIAGYAIHGHGEK 292
Query: 300 KLQLGEQI--AKRLLDCRSADSGTYVLLSNAYASSGK------WKEAVQIRAKMKEAGVQ 351
LQL + + +K + +C + S + G W E +I ++K G
Sbjct: 293 ALQLFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTE-YKITPQIKHYGCM 351
Query: 352 KEPGCSSIEVNNEIHEFILGDIRHPQ-----------REQIYKKMQE--LKQIVKLEGYS 398
+ C + V + H+FI P + YK + E ++I+KL+ S
Sbjct: 352 VDLFCRAGMVGHA-HKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSS 410
Query: 399 PSTEVVLHDIEDWEKEWA 416
P V++ ++ W+
Sbjct: 411 PENYVLVSNVYASLGRWS 428
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/504 (43%), Positives = 320/504 (63%), Gaps = 16/504 (3%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLF---------------DEMP 45
EG+++HG +LK GL + L+ +Y CG +DA LF DE
Sbjct: 135 EGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERG 194
Query: 46 ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLF- 104
+VV VM++ Y G ++ A E+F R+ + V W MI G +NG A+++F
Sbjct: 195 REFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFH 254
Query: 105 REMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC 164
R MQ +V PN VT+V VL A S+LG LELG+W+H Y K++I ++ ++G AL++MY++C
Sbjct: 255 RMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKC 314
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL 224
G I+KA+QVFE + + +V T+N++I GLAMHG++ + M GI P+ VT++ +L
Sbjct: 315 GSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAIL 374
Query: 225 NACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPD 284
+ACSH GLVD G F M G++P+IEHYGC+VDLL R G EEA + I NM + PD
Sbjct: 375 SACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPD 434
Query: 285 HIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAK 344
++ +LL A K+H +++G + A+ L+ DSG YV LSN YASSG W +R
Sbjct: 435 DVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAVRLM 494
Query: 345 MKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVV 404
MK+ ++K+PGCS IE++ IHEF++ D H + + I+ ++E+ + LEG+ P T V
Sbjct: 495 MKDMDIRKDPGCSWIEIDGVIHEFLVEDDSHSRAKDIHSMLEEISNKLSLEGHMPDTTQV 554
Query: 405 LHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKR 464
L +++ KE L HSE++A+ +GLIST P T + +VKNLR+C DCHS +KLI+ + +R
Sbjct: 555 LLKMDEKHKESVLHYHSEKIAVAFGLISTPPKTPLCIVKNLRICEDCHSSMKLISKMYER 614
Query: 465 KIIVRDRNRFHHFENGTCSCGDYW 488
KI++RDR RFHHFE+G+CSC DYW
Sbjct: 615 KIVIRDRKRFHHFEHGSCSCMDYW 638
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 130/316 (41%), Gaps = 53/316 (16%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEM-ARALDLFREMQRD-NVRPNEVTIVCVLSAC 126
A VF ++ ++ W +I L + AL +F +M + V PN+ T VL AC
Sbjct: 68 ALSVFDQLPERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKAC 127
Query: 127 SQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC---------------------- 164
+ + L G+ +H + K + + V L+ MY C
Sbjct: 128 AVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRN 187
Query: 165 -------------------------GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSI 199
G++ A ++F+ M +R V ++N +I+G A +G
Sbjct: 188 LVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYK 247
Query: 200 EAVEMFREMINQG-IRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGC 258
EA+E+F M+ G + P +VT V VL A S G+++LG + ++ I
Sbjct: 248 EAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKN-KIRIDDVLGSA 306
Query: 259 IVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSAD 318
+VD+ ++ G E+A + + I +++ +HGK R+ C +
Sbjct: 307 LVDMYAKCGSIEKAIQVFERLP-QNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISP 365
Query: 319 SG-TYVLLSNAYASSG 333
S TY+ + +A + +G
Sbjct: 366 SDVTYIAILSACSHAG 381
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 27/204 (13%)
Query: 166 DIDKALQVFEEMKERDVTTYNSLIAGLA-MHGRSIEAVEMFREMINQG-IRPTKVTFVGV 223
DI AL VF+++ ER+ +N++I LA R ++A+ +F +M+++ + P + TF V
Sbjct: 64 DIGYALSVFDQLPERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSV 123
Query: 224 LNACS-----------HG-----GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
L AC+ HG GLVD F + ++ R Y + G + D
Sbjct: 124 LKACAVMARLAEGKQVHGLLLKFGLVDDEF-VVTNLLRMYVM------CGSMEDANVLFY 176
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG--TYVLL 325
R E D + N+ +L + G ++G A R L R A ++ ++
Sbjct: 177 RNVEGVDDVRNLVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVM 236
Query: 326 SNAYASSGKWKEAVQIRAKMKEAG 349
+ YA +G +KEA++I +M + G
Sbjct: 237 ISGYAQNGFYKEAIEIFHRMMQMG 260
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/489 (45%), Positives = 317/489 (64%), Gaps = 34/489 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGE--FKDAMQLFDEMPECNDVVASTVMINC 59
G+ +HG V+K G + L+ +Y GE F+ A ++FD+ P+
Sbjct: 144 GKCVHGCVVKFGFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPK------------- 190
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
DTV W+AMI G VR G +RA+DLFREMQ V P+E+T+
Sbjct: 191 -------------------MDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITM 231
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V VLSAC+ LGALELG+W+ SY+ K I + + ALI+M+++CG++DKA+++F +M
Sbjct: 232 VSVLSACADLGALELGKWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDS 291
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
R + ++ S+IAGLAMHGR ++AV +F EM+ GI P V F+GVL+ACSH GLVD G
Sbjct: 292 RTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRYY 351
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F SM R++ I P++EHYGC+VDLL R G +EA++F+ M P+ I+ ++++AC G
Sbjct: 352 FGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEPNQIIWRTIITACHATG 411
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+L+LGE I+K L+ YVLLSN YA +W++ ++R M G++K PG + I
Sbjct: 412 ELKLGESISKELIKSEPMHESNYVLLSNIYAKLRQWEKKTKVREMMDMRGMKKVPGSTMI 471
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
EVNNE++EF+ GD H Q ++IY+ + E+ + +K GY P+T VL DI++ +KE AL
Sbjct: 472 EVNNEMYEFVAGDKSHDQYKEIYEMVDEMGREIKKAGYVPTTSQVLLDIDEEDKEDALYR 531
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI + L++T P T+IR+VKNLRVC DCHS K I+ + R+I+VRDRNRFHHF+N
Sbjct: 532 HSEKLAIAFALLNTPPGTSIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKN 591
Query: 480 GTCSCGDYW 488
G CSC D+W
Sbjct: 592 GLCSCRDFW 600
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 106/200 (53%), Gaps = 4/200 (2%)
Query: 103 LFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYS 162
+R M R V PN+ T VL C+ +G+L LG+ +H + K + + V LI+MY
Sbjct: 112 FYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMYC 171
Query: 163 RCGD--IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTF 220
G+ + A +VF++ + D T++++IAG G S AV++FREM G+ P ++T
Sbjct: 172 CLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITM 231
Query: 221 VGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
V VL+AC+ G ++LG + +S I +E ++D+ ++ G ++A M
Sbjct: 232 VSVLSACADLGALELG-KWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMD 290
Query: 281 IAPDHIMLGSLLSACKIHGK 300
+ + S+++ +HG+
Sbjct: 291 -SRTIVSWTSVIAGLAMHGR 309
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/486 (45%), Positives = 311/486 (63%), Gaps = 3/486 (0%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELY-GKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
+H +KLGL L+ ++ G G D + L D +I Y
Sbjct: 98 VHTHAVKLGLDRFVLVSNALIRVHAGFLGSLADGLLLL-RTAAAVDASTFNTLITAYARA 156
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
G + +A +F + ++ V W+AM++G V+ G+ AL +F MQ ++VRP++ +V VL
Sbjct: 157 GRLADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGVL 216
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
+AC+Q GALE G+W+H Y+ H I +N G AL++MYS+CG++ A+ VFE M+ ++V
Sbjct: 217 AACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVL 276
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
+ ++I GLAMHGR EAV +F +M + GIRP + F+GVL AC+H GLVD G E+F SM
Sbjct: 277 AWTTMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSM 336
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQL 303
R YGI+P+IEHYGC+VDLL+R G EA + I M + PD ++ G+L++ C+ H ++
Sbjct: 337 VRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALMAGCRFHKNVEF 396
Query: 304 GEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNN 363
E +AK + SG YVLLSN YA+SG+ A +IR M+E GV K PGCS++EVN
Sbjct: 397 AEYVAKHWILLEPDKSGAYVLLSNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEVNG 456
Query: 364 EIHEFILGDIRHPQREQIYKKMQELKQIVKL-EGYSPSTEVVLHDIEDWEKEWALAIHSE 422
IH+FI+GD+ HP+ + I K E+ ++L EGY P + VL DIE+ EKE AL+ HSE
Sbjct: 457 VIHQFIVGDLSHPRIKDILSKWYEIDTRIRLEEGYIPDMKEVLLDIEEEEKEGALSRHSE 516
Query: 423 RLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTC 482
+LAI + LIS IR+ KNLRVC+DCH + KLI+ + R+I+VRDR RFH F+ GTC
Sbjct: 517 KLAIAFALISISDNMPIRIFKNLRVCHDCHHVTKLISKVYGREIVVRDRTRFHLFKEGTC 576
Query: 483 SCGDYW 488
SC DYW
Sbjct: 577 SCKDYW 582
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 39/207 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ +HG + G++ N LV++Y KCGE + AM +F+ M + +V+A T MI
Sbjct: 227 QGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERM-QYKNVLAWTTMIK-- 283
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
GL +G + A+ LF +M+ +RP+++ +
Sbjct: 284 -----------------------------GLAMHGRGSEAVMLFAQMESSGIRPDDIAFI 314
Query: 121 CVLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
VL AC+ G ++ GR + M + + + H G ++++ +R G + +A ++ ++M
Sbjct: 315 GVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEHY--GCMVDLLARNGFLYEAKEMIQKM 372
Query: 178 K-ERDVTTYNSLIAGLAMHGRSIEAVE 203
E D + +L+AG H +++E E
Sbjct: 373 PMEPDALIWGALMAGCRFH-KNVEFAE 398
>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 596
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 214/487 (43%), Positives = 314/487 (64%), Gaps = 1/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+ HG V+K + R ++ Y CG DA +FDE E DVV+ MI+ +
Sbjct: 111 GRQFHGMVIKNSFEMDVFVRNSIIRFYSVCGRLNDARWVFDESSEL-DVVSWNSMIDGCI 169
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+G + A +FS++ ++ + W MI G +NG+ AL LFREMQ + PN +V
Sbjct: 170 RNGNILEALSLFSKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLDQEPNSAILVS 229
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLSACSQLGAL+ G W+H Y+GK + ++ I+ ALI+MY++CG ID A+Q F ++RD
Sbjct: 230 VLSACSQLGALDHGCWVHCYIGKKCVRVDSILSAALIDMYAKCGSIDLAMQAFSTSRKRD 289
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V+ Y + I+GLAM+G S EA+++F +M +GI P V+++ VL ACSH G V+ GF F
Sbjct: 290 VSAYTAAISGLAMNGCSEEALQLFEQMKGEGISPDGVSYIAVLCACSHAGWVEKGFHYFA 349
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM+ +GI P+++HY C+VDLL R G EEA F+ +M I PD+++ G+LL AC+++G
Sbjct: 350 SMSDVHGIRPELDHYACMVDLLGRAGLLEEAEKFVASMPIKPDNVIWGALLGACRVYGNA 409
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++G+++ L++ G Y+LLSN YA S K ++A Q+R M+ V + PGCS IEV
Sbjct: 410 EMGQRVGSLLVESDQNHDGRYILLSNIYAESMKGEDAEQVRKTMRRRKVDRVPGCSLIEV 469
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+HEF GD H + E+IY +E+ + +K GY T V+ D+E+ EKE + HS
Sbjct: 470 AGFVHEFFSGDRSHEKTEEIYLMWEEIVKEIKKFGYREETRAVVFDVEEEEKEAVIGHHS 529
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ +G + TK +T+R+VKN+R+C+DCH IKL++ + KRKI +RDR FHHFE G
Sbjct: 530 EKLAVAFGFLYTKSGSTLRIVKNIRICSDCHYAIKLVSKVFKRKIAIRDRKCFHHFEEGL 589
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 590 CSCKDYW 596
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 12/272 (4%)
Query: 93 RNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHI 152
R G + ++ LF M ++ PN T + CS A +LGR H + K+ +++
Sbjct: 69 RPGSLLSSVLLFVRMGVLSLAPNNFTFTFLFQGCSNCVAFDLGRQFHGMVIKNSFEMDVF 128
Query: 153 VGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG 212
V ++I YS CG ++ A VF+E E DV ++NS+I G +G +EA+ +F +M +
Sbjct: 129 VRNSIIRFYSVCGRLNDARWVFDESSELDVVSWNSMIDGCIRNGNILEALSLFSKMTER- 187
Query: 213 IRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
+++ +++ + G +F+ M EP ++ S++G +
Sbjct: 188 ---NDISWNMMISGYAQNGQPKEALALFREMQM-LDQEPNSAILVSVLSACSQLGALDHG 243
Query: 273 ---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAY 329
+ +I + D I+ +L+ G + L Q R D Y +
Sbjct: 244 CWVHCYIGKKCVRVDSILSAALIDMYAKCGSIDLAMQA---FSTSRKRDVSAYTAAISGL 300
Query: 330 ASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
A +G +EA+Q+ +MK G+ + G S I V
Sbjct: 301 AMNGCSEEALQLFEQMKGEGISPD-GVSYIAV 331
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/491 (44%), Positives = 318/491 (64%), Gaps = 36/491 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ I V G N LV++Y KCGE A +LFD M +
Sbjct: 278 GKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMED--------------- 322
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
KD + W MI G AL LF M R+NV PN+VT +
Sbjct: 323 -----------------KDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLA 365
Query: 122 VLSACSQLGALELGRWIHSYMGKH---RIDLNHI-VGGALINMYSRCGDIDKALQVFEEM 177
VL AC+ LGAL+LG+W+H+Y+ K+ ++N++ + ++I MY++CG ++ A QVF M
Sbjct: 366 VLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSM 425
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
R + ++N++I+GLAM+G + A+ +F EMIN+G +P +TFVGVL+AC+ G V+LG
Sbjct: 426 GSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGH 485
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F SM +DYGI P+++HYGC++DLL+R G+ +EA + NM++ PD + GSLL+AC+I
Sbjct: 486 RYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRI 545
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
HG+++ GE +A+RL + +SG YVLLSN YA +G+W + +IR K+ + G++K PGC+
Sbjct: 546 HGQVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCT 605
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
SIE++ +HEF++GD HPQ E I++ + E+ ++++ G+ P T VL+D+++ KE AL
Sbjct: 606 SIEIDGVVHEFLVGDKFHPQSENIFRMLDEVDRLLEETGFVPDTSEVLYDMDEEWKEGAL 665
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LAI +GLISTKP +TIR+VKNLRVC +CHS KLI+ I R+II RDRNRFHHF
Sbjct: 666 TQHSEKLAIAFGLISTKPGSTIRIVKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHF 725
Query: 478 ENGTCSCGDYW 488
++G CSC D W
Sbjct: 726 KDGFCSCNDRW 736
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 185/390 (47%), Gaps = 50/390 (12%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
E +++H LKL L + L+ +Y + GE + A +FD+ D V+ T +I Y
Sbjct: 145 EAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDK-STLRDAVSFTALITGY 203
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V G V++A +F + KD V W AMI G V++G AL F MQ +V PN+ T+V
Sbjct: 204 VSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMV 263
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSAC L +LELG+WI S++ N + AL++MYS+CG+I A ++F+ M+++
Sbjct: 264 SVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDK 323
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG---- 236
DV +N++I G EA+ +F M+ + + P VTF+ VL AC+ G +DLG
Sbjct: 324 DVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVH 383
Query: 237 -------------------------------FEIFQSMTRDYGIEPQIEHYGCIVDLLSR 265
E+ + + R G + + ++ L+
Sbjct: 384 AYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSR-SLASWNAMISGLAM 442
Query: 266 VGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT- 321
G E A ++ + N PD I +LSAC G ++LG R + D G
Sbjct: 443 NGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGH----RYFSSMNKDYGIS 498
Query: 322 -----YVLLSNAYASSGKWKEAVQIRAKMK 346
Y + + A SGK+ EA + M+
Sbjct: 499 PKLQHYGCMIDLLARSGKFDEAKVLMGNME 528
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 122/311 (39%), Gaps = 64/311 (20%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVEL--YGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
++IH ++K GL + + KL+E + A+ LF +
Sbjct: 42 KQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSI---------------- 85
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
H N F W +I +L LF +M + PN T
Sbjct: 86 --HHQPPNIF------------IWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFP 131
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD-------------- 166
+ +C++ A + +H++ K + L+ V +LI+MYS+ G+
Sbjct: 132 SLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLR 191
Query: 167 -----------------IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
+D A ++F+E+ +DV ++N++IAG GR EA+ F M
Sbjct: 192 DAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQ 251
Query: 210 NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRP 269
+ P + T V VL+AC H ++LG I S RD G ++ +VD+ S+ G
Sbjct: 252 EADVSPNQSTMVSVLSACGHLRSLELGKWI-GSWVRDRGFGKNLQLVNALVDMYSKCGEI 310
Query: 270 EEAYDFITNMK 280
A M+
Sbjct: 311 GTARKLFDGME 321
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 102/236 (43%), Gaps = 16/236 (6%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINM--YSRCGDIDKALQVFEEMKE 179
+L+ C + +L + IHS + K + LI S D+ AL +F +
Sbjct: 31 LLAKCPDIPSL---KQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHH 87
Query: 180 R--DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
+ ++ +N+LI ++ ++ +F +M++ G+ P TF + +C+
Sbjct: 88 QPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAK 147
Query: 238 EIF-QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
++ ++ + P + + ++ + S+VG A + + D + +L++
Sbjct: 148 QLHAHALKLALHLHPHV--HTSLIHMYSQVGELRHA-RLVFDKSTLRDAVSFTALITGYV 204
Query: 297 IHGKLQLGEQIAKRLLD-CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
G + A+RL D + D ++ + Y SG+++EA+ +M+EA V
Sbjct: 205 SEGHVD----DARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVS 256
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/488 (45%), Positives = 312/488 (63%), Gaps = 33/488 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKC-GEFKDAMQLFDEMPECNDVVASTVMINCY 60
G+ +HG V+K G + + +V +Y C G A ++FDEMP+
Sbjct: 151 GQTVHGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPK-------------- 196
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
D+V W+AMI G R G A+ LFREMQ V P+E+T+V
Sbjct: 197 ------------------SDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMV 238
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+LSAC+ LGALELG+WI +Y+ +H I V ALI+M+++CGDI KAL++F M E+
Sbjct: 239 SMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEK 298
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+ ++ S+I G+AMHGR EA +F EM + G+ P V F+G+L+ACSH GLV+ G E F
Sbjct: 299 TIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGREYF 358
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM + Y + P+IEHYGC+VD+ R G +EA +F+ NM I P+ ++L +L+SAC+ HG+
Sbjct: 359 GSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGE 418
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+LGE+I K L+ YVLLSN YA + W++ +IR M+ G++K PG + IE
Sbjct: 419 FKLGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKTKIREVMEVKGMKKVPGSTMIE 478
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
++NEI+EF+ GD H Q ++IY+ + E+ + +K GY PST VL DI + +KE +L H
Sbjct: 479 IDNEIYEFVAGDKSHKQHKEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDSLNRH 538
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI +GL+ T P T IR+VKNLRVC+DCHS K I+ I R+II+RDRNRFHHF++G
Sbjct: 539 SEKLAIAFGLLRTPPGTPIRIVKNLRVCSDCHSASKFISKIYDREIIMRDRNRFHHFKSG 598
Query: 481 TCSCGDYW 488
CSCGD+W
Sbjct: 599 QCSCGDFW 606
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 192/453 (42%), Gaps = 85/453 (18%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
+IH +LKLGL +N K + + D AS +
Sbjct: 47 QIHTHILKLGLHNNPLVLTKFASI--------------SSLIHATDYAASFL-------- 84
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMA-RALDLFREMQRDNVRPNEVTIVCV 122
F + ++ D + +I + G +AL L+ M D + PN+ T V
Sbjct: 85 ------FSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFV 138
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC-GDIDKALQVFEEMKERD 181
L AC+ L L LG+ +H + K D + V +++MYS C G I+ A +VF+EM + D
Sbjct: 139 LKACAGLEVLNLGQTVHGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSD 198
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
T++++I G A GRS EAV +FREM + P ++T V +L+AC+ G ++LG I
Sbjct: 199 SVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEA 258
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRV-------------------------------GRPE 270
+ R + I +E ++D+ ++ GR +
Sbjct: 259 YIER-HEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQ 317
Query: 271 EA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT--YVLL 325
EA ++ +T+ +APD + LLSAC G ++ G + ++ Y +
Sbjct: 318 EATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCM 377
Query: 326 SNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKM 385
+ Y +G KEA++ M IE N I ++ R ++ +K+
Sbjct: 378 VDMYCRTGLVKEALEFVRNM------------PIEPNPVILRTLVSACRGHGEFKLGEKI 425
Query: 386 QELKQIVKLEGYSPSTEVVLHDIE----DWEKE 414
+L ++K E S V+L +I WEK+
Sbjct: 426 TKL--LMKHEPLHESNYVLLSNIYAKTLSWEKK 456
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/467 (47%), Positives = 306/467 (65%), Gaps = 3/467 (0%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
++++Y KCG +DA +LFD+M E D+V+ T MI+ Y + G + A VF + +D
Sbjct: 273 MLDMYVKCGSLEDARRLFDKMEE-KDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITA 331
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTIVCVLSACSQLGALELGRWIHSYM 142
W A+I +NG+ AL +FRE+Q + N +PNEVT+ L+AC+QLGA++LG WIH Y+
Sbjct: 332 WNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYI 391
Query: 143 GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAV 202
K I LN + +LI+MYS+CG ++KAL+VF ++ RDV ++++IAGLAMHG A+
Sbjct: 392 KKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAI 451
Query: 203 EMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDL 262
++F +M ++P VTF +L ACSH GLVD G F M YG+ P +HY C+VD+
Sbjct: 452 DLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDI 511
Query: 263 LSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTY 322
L R G EEA + I M I P + G+LL AC+I+G ++L E RLL+ S + G Y
Sbjct: 512 LGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAY 571
Query: 323 VLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIY 382
VLLSN YA +GKW ++R MK +G++KEPGCSSIEVN IHEF++GD HP +IY
Sbjct: 572 VLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLSTEIY 631
Query: 383 KKMQELKQIVKLEGYSPSTEVVLHDI-EDWEKEWALAIHSERLAICYGLISTKPYTTIRV 441
K+ E+ +K GY +L + E++ KE AL +HSE+LAI YGLI +P IR+
Sbjct: 632 SKLDEIVARIKSTGYVSDESHLLQFVEEEYMKEHALNLHSEKLAIAYGLIRMEPSQPIRI 691
Query: 442 VKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
VKNLRVC DCHS+ KLI+ + R I++RDR RFHHF G CSC DYW
Sbjct: 692 VKNLRVCGDCHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 175/366 (47%), Gaps = 69/366 (18%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D+ S +I+ Y G +++A+ VFS++ KD V W +MI G V+ G AL LF+ M
Sbjct: 164 SDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRM 223
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ +N RPN VT+V VLSAC++ LE GRW Y+ ++ ID+N I+ A+++MY +CG +
Sbjct: 224 KMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSL 283
Query: 168 DKALQVFEEMKER-------------------------------DVTTYNSLIAGLAMHG 196
+ A ++F++M+E+ D+T +N+LI+ +G
Sbjct: 284 EDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNG 343
Query: 197 RSIEAVEMFREM-INQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEH 255
+ EA+ +FRE+ +N+ +P +VT L AC+ G +DLG I + + GI+
Sbjct: 344 KPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQ-GIKLNFHI 402
Query: 256 YGCIVDLLSRVGRPEEAY-------------------------------DFITNM---KI 281
++D+ S+ G E+A D + M K+
Sbjct: 403 TTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKV 462
Query: 282 APDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT--YVLLSNAYASSGKWKEAV 339
P+ + +LL AC G + G ++ G+ Y + + +G +EAV
Sbjct: 463 KPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAV 522
Query: 340 QIRAKM 345
++ KM
Sbjct: 523 ELIEKM 528
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 162/335 (48%), Gaps = 18/335 (5%)
Query: 15 RSNRSTRLKLVELYGKCGEFKDAMQLFDEMPEC----NDVVASTVMINCYVEH-GLVENA 69
+SN ST L++ KC K QL M + A+ + C + ++ A
Sbjct: 27 KSNPSTVPILID---KCANKKHLKQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYA 83
Query: 70 FEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR-PNEVTIVCVLSACSQ 128
+VF ++ + W +I + + + L +F +M ++ R PN T V+ A ++
Sbjct: 84 CKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATE 143
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
+ +L G+ IH + K + + +LI+ YS GD+D A VF ++ E+D+ ++NS+
Sbjct: 144 VSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSM 203
Query: 189 IAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYG 248
I+G G EA+++F+ M + RP +VT VGVL+AC+ ++ G + R+ G
Sbjct: 204 ISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERN-G 262
Query: 249 IEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGE-QI 307
I+ + ++D+ + G E+A M+ D + ++ I G ++G+
Sbjct: 263 IDINLILSNAMLDMYVKCGSLEDARRLFDKME-EKDIVSWTTM-----IDGYAKVGDYDA 316
Query: 308 AKRLLDCRS-ADSGTYVLLSNAYASSGKWKEAVQI 341
A+R+ D D + L ++Y +GK KEA+ I
Sbjct: 317 ARRVFDVMPREDITAWNALISSYQQNGKPKEALAI 351
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/489 (44%), Positives = 323/489 (66%), Gaps = 4/489 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN-DVVASTVMINCY 60
G + HGQ +K G + + LV +Y G+ A +F M C DVV+ T MI Y
Sbjct: 136 GMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRM--CRFDVVSWTCMIAGY 193
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G ++A E+F R+ ++ V W+ MI G RN +A++ F +Q + V NE +V
Sbjct: 194 HRCGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMV 253
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+S+C+ LGAL +G H Y+ ++++ LN I+G A+++MY+RCG+++KA+ VFE++ E+
Sbjct: 254 GVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEK 313
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV + +LIAGLAMHG + +A+ F EM +G P +TF VL ACSH G+V+ G EIF
Sbjct: 314 DVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIF 373
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+SM RD+G+EP++EHYGC+VDLL R G+ +A F+ M + P+ + +LL AC+IH
Sbjct: 374 ESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACRIHKN 433
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+++GE++ K LL+ + SG YVLLSN YA + KWK+ +R MK+ GV+K PG S IE
Sbjct: 434 VEVGERVGKILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMMKDKGVRKPPGYSLIE 493
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQE-LKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
++ ++HEF +GD HP+ E+I + ++ + +KL GY +T + DI++ EKE AL
Sbjct: 494 IDGKVHEFTIGDKTHPEIEKIERIWEDIILPKIKLAGYVGNTAETMFDIDEEEKEGALHR 553
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI YG++ + T IR+VKNLRVC DCH+ KLI+ + + ++IVRDRNRFHHF+
Sbjct: 554 HSEKLAIAYGIMKIRAPTPIRIVKNLRVCEDCHTATKLISKVFEVELIVRDRNRFHHFKE 613
Query: 480 GTCSCGDYW 488
GTCSC DYW
Sbjct: 614 GTCSCMDYW 622
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 149/335 (44%), Gaps = 42/335 (12%)
Query: 49 DVVASTVMINCYVEH--GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
DV A++ +I ++ L+ A V S+++ + + A+I G + + + +
Sbjct: 48 DVFAASRLIAFCIDSTTNLLHYAIRVASQIQNPNLFIYNALIRGCSTSENPENSFHYYIK 107
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYS---- 162
R + P+ +T ++ AC+QL +G H KH + + V +L++MY+
Sbjct: 108 ALRFGLLPDNITHPFLVKACAQLENAPMGMQTHGQAIKHGFEQDFYVQNSLVHMYASVGD 167
Query: 163 ---------------------------RCGDIDKALQVFEEMKERDVTTYNSLIAGLAMH 195
RCGD A ++F+ M ER++ T++++I+G A +
Sbjct: 168 INAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARN 227
Query: 196 GRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEH 255
+AVE F + +G+ + VGV+++C+H G + +G + + + R+ + +
Sbjct: 228 NCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRN-KLSLNLIL 286
Query: 256 YGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG----KLQLGEQIAKRL 311
+VD+ +R G E+A + D + +L++ +HG L ++AK+
Sbjct: 287 GTAVVDMYARCGNVEKAVMVFEQLP-EKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKG 345
Query: 312 LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
R T+ + A + +G + ++I MK
Sbjct: 346 FVPRDI---TFTAVLTACSHAGMVERGLEIFESMK 377
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/438 (47%), Positives = 310/438 (70%), Gaps = 2/438 (0%)
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
+ +I+ Y + G + A E+F ++ KD + W MI G AL LF M R NV
Sbjct: 301 TNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNV 360
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKH-RIDLNHIVGGALINMYSRCGDIDKAL 171
+PN+VT + +L AC+ LGAL+LG+W+H+Y+ K+ R N + +LI+MY++CG I+ A
Sbjct: 361 KPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAE 420
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGI-RPTKVTFVGVLNACSHG 230
+VF M R++ ++N++++G AMHG + A+ +F EM+N+G+ RP +TFVGVL+AC+
Sbjct: 421 RVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQA 480
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGS 290
GLVDLG + F+SM +DYGI P+++HYGC++DLL+R + EEA + NM++ PD + GS
Sbjct: 481 GLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGS 540
Query: 291 LLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
LLSACK HG+++ GE +A+RL ++G +VLLSN YA +G+W + +IR ++ + G+
Sbjct: 541 LLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGM 600
Query: 351 QKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIED 410
+K PGC+SIE++ ++HEF++GD HP+ IYK + E+ ++++ G+ P+T VL+D+++
Sbjct: 601 KKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKLLEENGFVPNTSEVLYDMDE 660
Query: 411 WEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRD 470
KE AL+ HSE+LAI +GLI TKP TTIR+VKNLRVC +CHS KLI+ I R+II RD
Sbjct: 661 EWKEGALSQHSEKLAISFGLIKTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARD 720
Query: 471 RNRFHHFENGTCSCGDYW 488
RNRFHHF++G CSC D W
Sbjct: 721 RNRFHHFKDGFCSCNDCW 738
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 171/347 (49%), Gaps = 36/347 (10%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+++H LKL L N ++ +Y GE A +FD+ D V+ T +I Y
Sbjct: 149 EGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDK-SSLRDAVSFTALITGY 207
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V G +++A +F + VKD V W AMI G V++G A+ F EMQ NV PN+ T+V
Sbjct: 208 VSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMV 267
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSAC + ELG+WI S++ + N + ALI+MY +CG+ D A ++F+ ++E+
Sbjct: 268 VVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEK 327
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++N++I G + EA+ +F M+ ++P VTF+G+L+AC+ G +DLG +
Sbjct: 328 DVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVH 387
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK-------------------- 280
+ ++ + ++D+ ++ G E A +M
Sbjct: 388 AYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHA 447
Query: 281 ---------------IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
PD I +LSAC G + LG Q + ++
Sbjct: 448 ERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMI 494
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 132/323 (40%), Gaps = 66/323 (20%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVEL--YGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
++IH ++K GL + + KL+ G+ A+ LF+E + +
Sbjct: 45 KQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHK----------- 93
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
N F W ++I G + +L LF M V+PN T
Sbjct: 94 ------HNVF------------IWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFP 135
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD-------------- 166
+ +C++ A G+ +H++ K + N V ++I+MY+ G+
Sbjct: 136 FLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLR 195
Query: 167 -----------------IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
+D A ++F+E+ +DV ++N++I+G GR EA+ F EM
Sbjct: 196 DAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQ 255
Query: 210 NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRP 269
+ P K T V VL+AC H +LG I S RD G ++ ++D+ + G
Sbjct: 256 EANVLPNKSTMVVVLSACGHTRSGELGKWI-GSWVRDNGFGSNLQLTNALIDMYCKCGET 314
Query: 270 E---EAYDFITNMKIAPDHIMLG 289
+ E +D I + + M+G
Sbjct: 315 DIARELFDGIEEKDVISWNTMIG 337
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 101/220 (45%), Gaps = 14/220 (6%)
Query: 138 IHSYMGKHRIDLNHIVGGALINM--YSRCGDIDKALQVFEEMKER---DVTTYNSLIAGL 192
IHS + K ++ V LI+ S GD+ AL +FEE ++ +V +NSLI G
Sbjct: 47 IHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIRGY 106
Query: 193 AMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF-QSMTRDYGIEP 251
++ + ++ +F M+ G++P TF + +C+ G ++ ++ P
Sbjct: 107 SLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNP 166
Query: 252 QIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
+ + ++ + + VG + A + + D + +L++ G L A+RL
Sbjct: 167 HV--HTSVIHMYASVGEMDFA-RLVFDKSSLRDAVSFTALITGYVSQGCL----DDARRL 219
Query: 312 LD-CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
D D ++ + + Y SG+++EA+ +M+EA V
Sbjct: 220 FDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANV 259
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 215/439 (48%), Positives = 301/439 (68%)
Query: 50 VVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
V +++ Y G E+A++VF +K +D V W +MI+G NG AL LFREM
Sbjct: 153 VFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSV 212
Query: 110 DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDK 169
+ V P+ T+V +LSA ++LGALELGR +H Y+ K + N V +L+++Y++CG I +
Sbjct: 213 EGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIRE 272
Query: 170 ALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH 229
A +VF EM ER+ ++ SLI GLA++G EA+E+F+EM QG+ P+++TFVGVL ACSH
Sbjct: 273 AQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSH 332
Query: 230 GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLG 289
G++D GFE F+ M + GI P+IEHYGC+VDLLSR G ++AY++I NM + P+ ++
Sbjct: 333 CGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWR 392
Query: 290 SLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
+LL AC IHG L LGE LL+ SG YVLLSN YAS +W + IR M + G
Sbjct: 393 TLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWSDVQVIRRSMLKDG 452
Query: 350 VQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIE 409
V+K PG S +E+ N ++EF +GD HPQ + +Y ++++ +++KLEGY P T VL DIE
Sbjct: 453 VKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITELLKLEGYVPHTANVLADIE 512
Query: 410 DWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVR 469
+ EKE AL+ HSE++AI + L++T P T IRV+KNLRVC DCH IKLIA I R+I++R
Sbjct: 513 EEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRVCADCHMAIKLIAKIYDREIVIR 572
Query: 470 DRNRFHHFENGTCSCGDYW 488
DR+RFHHF G+CSC DYW
Sbjct: 573 DRSRFHHFRGGSCSCKDYW 591
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 109/212 (51%), Gaps = 1/212 (0%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A+ VF+ + + W +I G + + A +R+M V P+ T +L A S+
Sbjct: 71 AYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISK 130
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
+ G IHS ++ + V +L+++Y+ CGD + A +VFE MKERD+ +NS+
Sbjct: 131 SLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSM 190
Query: 189 IAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYG 248
I G A++GR EA+ +FREM +G+ P T V +L+A + G ++LG + + + G
Sbjct: 191 INGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLK-VG 249
Query: 249 IEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
+ ++DL ++ G EA + M
Sbjct: 250 LSKNSHVTNSLLDLYAKCGAIREAQRVFSEMS 281
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 42/201 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H +LK+GL N L++LY KCG ++A ++F EM E N
Sbjct: 238 GRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERN------------- 284
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
V WT++I GL NG AL+LF+EM+ + P+E+T V
Sbjct: 285 -------------------AVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVG 325
Query: 122 VLSACSQLGALELGRWIHSYMGKH-----RIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
VL ACS G L+ G M + RI+ H G ++++ SR G + +A + +
Sbjct: 326 VLYACSHCGMLDEGFEYFRRMKEECGIIPRIE--HY--GCMVDLLSRAGLVKQAYEYIQN 381
Query: 177 MK-ERDVTTYNSLIAGLAMHG 196
M + + + +L+ +HG
Sbjct: 382 MPVQPNAVIWRTLLGACTIHG 402
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 101/248 (40%), Gaps = 36/248 (14%)
Query: 136 RWIHSYMGKHRIDLNHIVGGA--LINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLA 193
+ IH++ +H + LN+ G + + S + A VF + +V T+N++I G A
Sbjct: 35 KQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHNPNVFTWNTIIRGYA 94
Query: 194 MHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HGGLVDLGFE---- 238
A +R+M+ + P T+ +L A S H + GFE
Sbjct: 95 ESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVF 154
Query: 239 IFQSMTRDYGI---------------EPQIEHYGCIVDLLSRVGRPEEAYDFITNMK--- 280
+ S+ Y E + + +++ + GRP EA M
Sbjct: 155 VQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVEG 214
Query: 281 IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC-RSADSGTYVLLSNAYASSGKWKEAV 339
+ PD + SLLSA G L+LG ++ LL S +S L + YA G +EA
Sbjct: 215 VEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQ 274
Query: 340 QIRAKMKE 347
++ ++M E
Sbjct: 275 RVFSEMSE 282
>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/486 (46%), Positives = 315/486 (64%), Gaps = 9/486 (1%)
Query: 6 HGQVLKLGLRSNRSTRLKLVELYGKC--GEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
H Q +K G+ S+ ++ Y KC G+ A +LFDEMP D V MI Y E
Sbjct: 1 HCQAVKPGIFSHGYVANNILSRYSKCVVGDLNLACKLFDEMPH-KDTVTLDTMITAYFE- 58
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
+A++VF + KD V W ++I+G NG+ AL L++ M + V P+ T+V +L
Sbjct: 59 ----SAYKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLL 114
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-ERDV 182
SAC++L L LGR H YM K ++ N AL+++Y++CG I +A ++F+EM ER+V
Sbjct: 115 SACAELATLVLGRRAHVYMVKVGLNKNLHANNALLDLYAKCGTISEARKIFDEMGIERNV 174
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
++ SLI GLA++G EA+E F++M +G+ P+++TFVGVL ACSH G+V+ GFE F+
Sbjct: 175 VSWTSLIVGLAVNGFGKEALEHFKDMEREGLVPSEITFVGVLYACSHCGIVNEGFEYFKR 234
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
M Y I P+IEHYGC+VDLL R G +EAYD+I +M + P+ ++ +LL AC IHG L
Sbjct: 235 MKEQYDIVPRIEHYGCMVDLLGRAGLLKEAYDYIQDMPLQPNAVIWRTLLGACTIHGHLG 294
Query: 303 LGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVN 362
LG RLL DSG YVLLSN YAS +W + ++R M GV+K PG S +E+
Sbjct: 295 LGAFARARLLQLEPKDSGDYVLLSNLYASEQRWSDVHEVRRTMLSEGVRKTPGYSLVELG 354
Query: 363 NEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSE 422
N +HEF++GD HPQ E IYK + E+ +KL GY P T VL DIE+ EKE AL HSE
Sbjct: 355 NHVHEFVMGDRTHPQSEAIYKMLVEMAMKLKLAGYVPHTANVLADIEEEEKESALFYHSE 414
Query: 423 RLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTC 482
++AI + LI+T P T IR++KNLRVC DCH IKLI+ + +R I+VRD +RFHHF +G+C
Sbjct: 415 KIAIAFMLINTLPGTPIRIIKNLRVCADCHFAIKLISKVFERDIVVRDCSRFHHFRDGSC 474
Query: 483 SCGDYW 488
SC DYW
Sbjct: 475 SCRDYW 480
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 212/487 (43%), Positives = 323/487 (66%), Gaps = 1/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ IHG V+++G+ S + + L+ +Y GE DA +LF+ + + ++++ C +
Sbjct: 323 GKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGC-M 381
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G VE A +F + KD V W+A+I G ++ + L LF EMQ +RP+E +V
Sbjct: 382 KCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVS 441
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V+SAC+ L AL+ G+W+H+Y+ K+ + +N I+G L++MY +CG ++ AL+VF M+E+
Sbjct: 442 VISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKG 501
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V+++N+LI GLA++G +++MF EM N G+ P ++TF+GVL AC H GLVD G F
Sbjct: 502 VSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFA 561
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM +GIEP ++HYGC+VDLL R G EA I +M +APD G+LL ACK HG
Sbjct: 562 SMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDT 621
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++GE++ ++L++ + G +VLLSN +AS G W++ +++R MK+ GV K PGCS IE
Sbjct: 622 EMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEA 681
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N +HEF+ GD HP ++ + E+ + +K+EGY+P T V DI++ EKE L HS
Sbjct: 682 NGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHS 741
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GL++ P T IR++KNLR+CNDCH+ KLI+ R+I+VRDR+RFH+F+ G
Sbjct: 742 EKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGA 801
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 802 CSCMDYW 808
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 161/340 (47%), Gaps = 62/340 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN------------- 48
G+EIH VLK+G S+ + L+ +Y CG +DA +LFDE P +
Sbjct: 160 GKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVK 219
Query: 49 -----------------DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGL 91
++VAS MI + G V A+++F+ + KD V W+A+I G
Sbjct: 220 KGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGY 279
Query: 92 VRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH 151
+NG AL +F EM + +R +EV +V VLSAC+ L ++ G+ IH + + I+
Sbjct: 280 EQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYV 339
Query: 152 IVGGALINMYS-------------------------------RCGDIDKALQVFEEMKER 180
+ ALI+MYS +CG ++KA +F+ M E+
Sbjct: 340 NLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEK 399
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D+ +++++I+G A H E + +F EM IRP + V V++AC+H +D G +
Sbjct: 400 DIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQG-KWV 458
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
+ R G++ + ++D+ + G E A + M+
Sbjct: 459 HAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGME 498
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 135/284 (47%), Gaps = 21/284 (7%)
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
++ + ++F R++ + W M+ +++ +AL L++ M ++NV P+ T V+ A
Sbjct: 91 LDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQA 150
Query: 126 CSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
C+ + LE G + IH ++ K D + V LINMY+ CG++ A ++F+E D +
Sbjct: 151 CA-VRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVS 209
Query: 185 YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT 244
+NS++AG G EA +F +M + I + V G V +++F M
Sbjct: 210 WNSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIV----LLGKMGQVMEAWKLFNEMD 265
Query: 245 RDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKL 301
E + + ++ + G EEA M + D +++ S+LSAC +
Sbjct: 266 -----EKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIV 320
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNA----YASSGKWKEAVQI 341
+ G+ I ++ +YV L NA Y+ SG+ +A ++
Sbjct: 321 KTGKMIHGLVI---RMGIESYVNLQNALIHMYSGSGEIMDAQKL 361
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 34/211 (16%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ +H + K GL+ N L+++Y KCG ++A+++F+ M E V + +I
Sbjct: 454 QGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEE-KGVSSWNALIIGL 512
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+GLVE R+LD+F EM+ + V PNE+T +
Sbjct: 513 AVNGLVE-------------------------------RSLDMFSEMKNNGVIPNEITFM 541
Query: 121 CVLSACSQLGALELGR-WIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
VL AC +G ++ GR S + KH I+ N G ++++ R G +++A ++ E M
Sbjct: 542 GVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPM 601
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
DV T+ +L+ HG + + R++I
Sbjct: 602 APDVATWGALLGACKKHGDTEMGERVGRKLI 632
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/491 (46%), Positives = 320/491 (65%), Gaps = 4/491 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG +I +K+GL SN ++ +Y G +A ++FD + D+ + +MI Y
Sbjct: 50 EGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLD-QDLYSWNIMIGGY 108
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V G + A E+F + +D V WT +I G V+ G ALDLF EM + PNE T+
Sbjct: 109 VGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLA 168
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF--EEMK 178
L+AC+ L AL+ GRWIH Y+ K I +N + +L++MY++CG+ID A +VF E
Sbjct: 169 SALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGL 228
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
+ V +N++I G AMHG+S EA+++F +M + + P KVTFV +LNACSHG LV+ G
Sbjct: 229 KLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRG 288
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
F+SM YGIEP+IEHYGC+VDLL R G +EA + + NM +APD + G+LL AC+IH
Sbjct: 289 YFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIH 348
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
++ G++I K + + S G +VLL+N Y++SG+W EA +R K++ +G +K PGCSS
Sbjct: 349 KDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSS 408
Query: 359 IEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE-KEWAL 417
IE+N H+F++GD HPQ +Q+Y + E+ +K GY P VL DI+D E KE AL
Sbjct: 409 IELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGYVPEFGEVLLDIDDEEDKETAL 468
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
+ HSE+LAI +GLI+T P T IR+VKNLRVC DCH K I+ + KR+IIVRDR R+HHF
Sbjct: 469 SKHSEKLAIAFGLINTPPGTAIRIVKNLRVCADCHEATKFISKVYKREIIVRDRIRYHHF 528
Query: 478 ENGTCSCGDYW 488
++G CSC DYW
Sbjct: 529 KDGFCSCKDYW 539
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 112/273 (41%), Gaps = 76/273 (27%)
Query: 100 ALDLFREMQR-DNVRPNEVTIVCVLSACSQ-LGALELGRWIHSYMGKHRIDLNHIVGGAL 157
++ +F M R PN T V V AC LG LE G I + K ++ N V A+
Sbjct: 15 SMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLE-GEQIRVHAIKIGLESNLFVTNAM 73
Query: 158 INMYSRCGDIDKALQV-------------------------------FEEMKERDVTTYN 186
I MY+ G +D+A +V F+EM ERDV ++
Sbjct: 74 IRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWT 133
Query: 187 SLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH----------------- 229
++IAG G EA+++F EM+ G P + T L AC++
Sbjct: 134 TIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKS 193
Query: 230 ------------------GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEE 271
G +D ++F +YG++ ++ + ++ + G+ +E
Sbjct: 194 EIKMNERLLASLLDMYAKCGEIDFAAKVFHD---EYGLKLKVWPWNAMIGGYAMHGKSKE 250
Query: 272 AYDFITNM---KIAPDHIMLGSLLSACKIHGKL 301
A D M K++P+ + +LL+AC HGKL
Sbjct: 251 AIDLFEQMKVEKVSPNKVTFVALLNACS-HGKL 282
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/491 (46%), Positives = 320/491 (65%), Gaps = 4/491 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG +I +K+GL SN ++ +Y G +A ++FD + D+ + +MI Y
Sbjct: 135 EGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLD-QDLYSWNIMIGGY 193
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V G + A E+F + +D V WT +I G V+ G ALDLF EM + PNE T+
Sbjct: 194 VGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLA 253
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF--EEMK 178
L+AC+ L AL+ GRWIH Y+ K I +N + +L++MY++CG+ID A +VF E
Sbjct: 254 SALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGL 313
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
+ V +N++I G AMHG+S EA+++F +M + + P KVTFV +LNACSHG LV+ G
Sbjct: 314 KLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRG 373
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
F+SM YGIEP+IEHYGC+VDLL R G +EA + + NM +APD + G+LL AC+IH
Sbjct: 374 YFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIH 433
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
++ G++I K + + S G +VLL+N Y++SG+W EA +R K++ +G +K PGCSS
Sbjct: 434 KDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSS 493
Query: 359 IEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE-KEWAL 417
IE+N H+F++GD HPQ +Q+Y + E+ +K GY P VL DI+D E KE AL
Sbjct: 494 IELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGYVPEFGEVLLDIDDEEDKETAL 553
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
+ HSE+LAI +GLI+T P T IR+VKNLRVC DCH K I+ + KR+IIVRDR R+HHF
Sbjct: 554 SKHSEKLAIAFGLINTPPGTAIRIVKNLRVCADCHEATKFISKVYKREIIVRDRIRYHHF 613
Query: 478 ENGTCSCGDYW 488
++G CSC DYW
Sbjct: 614 KDGFCSCKDYW 624
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 125/310 (40%), Gaps = 77/310 (24%)
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDG-LVRNGEMARALDLFREMQR-DNVRPNEVTIVC 121
G + A ++F ++ D + MI V ++ +F M R PN T V
Sbjct: 63 GSLSYAHQLFDQIPKPDVFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVF 122
Query: 122 VLSACSQ-LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV------- 173
V AC LG LE G I + K ++ N V A+I MY+ G +D+A +V
Sbjct: 123 VFKACGNGLGVLE-GEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQ 181
Query: 174 ------------------------FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
F+EM ERDV ++ ++IAG G EA+++F EM+
Sbjct: 182 DLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEML 241
Query: 210 NQGIRPTKVTFVGVLNACSH-----------------------------------GGLVD 234
G P + T L AC++ G +D
Sbjct: 242 QTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEID 301
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSL 291
++F +YG++ ++ + ++ + G+ +EA D M K++P+ + +L
Sbjct: 302 FAAKVFHD---EYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVAL 358
Query: 292 LSACKIHGKL 301
L+AC HGKL
Sbjct: 359 LNACS-HGKL 367
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 110/234 (47%), Gaps = 18/234 (7%)
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMY--SRCGDIDKALQVFEEMKER 180
L +C + + + H+++ + L+ I L+ + S G + A Q+F+++ +
Sbjct: 22 LESCKSMNQI---KQTHAHLITTGLILHPITANKLLKVLIASSFGSLSYAHQLFDQIPKP 78
Query: 181 DVTTYNSLIAGLA-MHGRSIEAVEMFREMIN-QGIRPTKVTFVGVLNACSHGGLVDLGFE 238
DV YN++I A + S ++ +F M+ G P + TFV V AC +G V G +
Sbjct: 79 DVFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQ 138
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSAC 295
I + G+E + ++ + + G +EA +D+ + + +IM+G + +
Sbjct: 139 IRVHAIK-IGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSG 197
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
+I ++ +++++R D ++ + Y G +KEA+ + +M + G
Sbjct: 198 EIGRAKEMFDEMSER-------DVVSWTTIIAGYVQVGCFKEALDLFHEMLQTG 244
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/487 (43%), Positives = 312/487 (64%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H +L+ G + + LV++YGKCGE
Sbjct: 251 GKRLHAYILRNGFGMSLALATALVDMYGKCGE---------------------------- 282
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ +A +F +K KD + WTAMI + + A LF +M+ + VRPNE+T+V
Sbjct: 283 ----IRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVS 338
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+LS C+ GAL++G+W H+Y+ K ++++ I+ ALI+MY++CGDI A ++F E +RD
Sbjct: 339 LLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRD 398
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ T+N ++AG MHG +A+++F EM G++P +TF+G L+ACSH GLV G +F+
Sbjct: 399 ICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFE 458
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M D+G+ P++EHYGC+VDLL R G +EAY I +M + P+ + G++L+ACKIH
Sbjct: 459 KMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKNS 518
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+GE A+ LL + G VL+SN YA++ +W + +R +K+ G++KEPG SSIEV
Sbjct: 519 NMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPGMSSIEV 578
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N +H+F +GD HP E+I + + E+ + +K GY P T VVLH+I++ EKE AL HS
Sbjct: 579 NGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNIDEEEKETALNYHS 638
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ +GLIST P T IRVVKNLR+C+DCH++ KL++ I KR IIVRDRNRFHHF G+
Sbjct: 639 EKLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTKLLSKIYKRVIIVRDRNRFHHFREGS 698
Query: 482 CSCGDYW 488
CSCG YW
Sbjct: 699 CSCGGYW 705
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 153/266 (57%), Gaps = 11/266 (4%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIHG +K GL S+ L+++Y +CG A LFD+M E DVV+ + MI Y+
Sbjct: 128 GKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSE-RDVVSWSTMIRAYI 186
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
F FS+ + V WTAMI G +R ++ LF M +NV PN++T++
Sbjct: 187 ------TLFYGFSQ---RSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLS 237
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
++ +C +GA++LG+ +H+Y+ ++ ++ + AL++MY +CG+I A +F+ MK +D
Sbjct: 238 LIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKD 297
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V T+ ++I+ A A ++F +M + G+RP ++T V +L+ C+ G +D+G + F
Sbjct: 298 VMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMG-KWFH 356
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVG 267
+ G+E + ++D+ ++ G
Sbjct: 357 AYIDKQGVEVDVILKTALIDMYAKCG 382
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 109/262 (41%), Gaps = 57/262 (21%)
Query: 100 ALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALIN 159
AL+ + M++ ++ + I VL ACSQ+ +G+ IH + K+ + + V AL+
Sbjct: 93 ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152
Query: 160 MYSRCGDIDKALQVFEEMKERDVTTYNSLIAG-----LAMHGRSI--------------- 199
MYS CG + A +F++M ERDV +++++I RSI
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212
Query: 200 --EAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYG 257
E +F MI + + P +T + ++ +C G V LG + + R+ G +
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRN-GFGMSLALAT 271
Query: 258 CIVDLLSRVGRPEEAYDFITNMK----------------------------------IAP 283
+VD+ + G A +MK + P
Sbjct: 272 ALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRP 331
Query: 284 DHIMLGSLLSACKIHGKLQLGE 305
+ + + SLLS C ++G L +G+
Sbjct: 332 NELTMVSLLSLCAVNGALDMGK 353
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/487 (44%), Positives = 323/487 (66%), Gaps = 1/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++H +VL+ G+ ++ LV++Y +CG+ A LF+ M + + + T +I+ V
Sbjct: 180 GMQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGM-QMRSMASWTSVISGLV 238
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G V+ A ++F + +DT+ WTAMIDG V+ G AL+ FR MQ VR +E T+V
Sbjct: 239 RSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVS 298
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V++AC+QLGALE G W YMG+ I ++ VG ALI+MYS+CG I++AL VF++M RD
Sbjct: 299 VVTACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRD 358
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
T+ ++I GLA++GR EA++MF M+ P +VTFVGVL AC+H GLVD G E F
Sbjct: 359 KFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFL 418
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SMT Y I P + HYGC++D+L R G+ +EA D I M + P+ + G+LL++C+++G
Sbjct: 419 SMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNS 478
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++GE A+RLL+ +S Y+LLSN YA S +WK+ +IR + E G++KEPGCS IE+
Sbjct: 479 EIGELAAERLLELDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEKGIKKEPGCSMIEM 538
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N IHEF+ D HP ++IY K++ + ++ GY P VL ++ + EK+ L HS
Sbjct: 539 NGIIHEFVAADRSHPMNKEIYSKLENVLTDLRNAGYVPDVTEVLVEVTEEEKQKVLYWHS 598
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ + L++++ IR+VKNLR+C DCH+ IKLI+ + R++IVRDR RFHHF +G+
Sbjct: 599 EKLAVTFALLTSESNVIIRIVKNLRMCLDCHNAIKLISKLYGREVIVRDRTRFHHFRHGS 658
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 659 CSCKDYW 665
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 129/299 (43%), Gaps = 34/299 (11%)
Query: 82 VCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSY 141
V W A+I G R+G + F +M R + VT V VLSAC + L LG +H
Sbjct: 127 VMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKR 186
Query: 142 MGKHRIDLNHIVGGALINMYSRCGD-------------------------------IDKA 170
+ + + + V AL++MY+ CGD +D+A
Sbjct: 187 VLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRA 246
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
+F+ M ERD + ++I G GR +A+E FR M +R + T V V+ AC+
Sbjct: 247 RDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQL 306
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGS 290
G ++ G M R GI+ + ++D+ S+ G E A D +M D +
Sbjct: 307 GALETGEWARIYMGR-LGIKMDVFVGNALIDMYSKCGSIERALDVFKDMH-NRDKFTWTA 364
Query: 291 LLSACKIHGKLQLGEQIAKRLLDC-RSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
++ ++G+ + + R+L ++ D T+V + A +G + + M EA
Sbjct: 365 IILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEA 423
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/489 (43%), Positives = 317/489 (64%), Gaps = 3/489 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR + + + G++ + + ++++Y KCG DA +LFDEMPE DV + T+M++ Y
Sbjct: 246 GRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPE-RDVFSWTIMLDGYA 304
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV-RPNEVTIV 120
+ G + A VF+ + VK+ W +I +NG+ AL +F E+Q + +P+EVT+V
Sbjct: 305 KMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLV 364
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
LSAC+QLGA++LG WIH Y+ + I LN + +L++MY++CG ++KAL+VF ++ER
Sbjct: 365 STLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEER 424
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++++IAGL MHGR A+++F EM ++P VTF VL ACSH GLVD G F
Sbjct: 425 DVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFF 484
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
M YG+ P+++HY C+VD+L R G EEA + I M P + G+LL AC +H
Sbjct: 485 HEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMN 544
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++LGE + +LL + G VLLSN YA +G+W++ ++R M++ ++KEPGCSSIE
Sbjct: 545 VELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIE 604
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI-EDWEKEWALAI 419
N +HEF++GD HP IY K++E+ +K GY P+ +L I ED KE AL++
Sbjct: 605 ANGNVHEFLVGDNTHPLSSNIYSKLEEIATKLKSVGYEPNKSHLLQLIEEDDLKEQALSL 664
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GL++ P IRVVKNLR+C DCH+ KL++ + R I++RDR RFHHF +
Sbjct: 665 HSEKLAIAFGLVTLAPSQPIRVVKNLRICGDCHAFAKLVSRVYDRDILLRDRYRFHHFRD 724
Query: 480 GTCSCGDYW 488
G CSC DYW
Sbjct: 725 GHCSCMDYW 733
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 156/331 (47%), Gaps = 66/331 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +HG +KL + LV YG CG+ A +LF I+C
Sbjct: 145 GTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKG-------------ISC-- 189
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
KD V W +MI + AL+LF +M+R+NV PN VT+V
Sbjct: 190 -----------------KDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVG 232
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLSAC++ LE GRW+ SY+ + I ++ + A+++MY++CG +D A ++F+EM ERD
Sbjct: 233 VLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERD 292
Query: 182 V-------------------------------TTYNSLIAGLAMHGRSIEAVEMFREM-I 209
V +N LI+ +G+ EA+ +F E+ +
Sbjct: 293 VFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQL 352
Query: 210 NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRP 269
++ +P +VT V L+AC+ G +DLG I + R+ GI +VD+ ++ G
Sbjct: 353 SKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKRE-GIVLNCHLISSLVDMYAKCGSL 411
Query: 270 EEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
E+A + +++ D + ++++ +HG+
Sbjct: 412 EKALEVFYSVE-ERDVYVWSAMIAGLGMHGR 441
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 159/354 (44%), Gaps = 42/354 (11%)
Query: 3 REIHGQVLKLGLRSN--RSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+E+H ++L+ GL + +++L A LFD++P+ N +T +I Y
Sbjct: 42 KEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLYTWNT-LIRAY 100
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+F +F LDL + + PN+ T
Sbjct: 101 ASSSDPFQSFVIF---------------------------LDLLDKCED---LPNKFTFP 130
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+ A S+L A +G +H K ++ + +L+ Y CGD+ A ++F+ + +
Sbjct: 131 FVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCK 190
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++NS+I+ A +A+E+F +M + + P VT VGVL+AC+ ++ G +
Sbjct: 191 DVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVC 250
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ R GI+ + ++D+ ++ G ++A M P+ + + + G
Sbjct: 251 SYIERK-GIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEM---PERDVFSWTI---MLDGY 303
Query: 301 LQLGEQIAKRLL--DCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
++G+ A RL+ + + +L +AY +GK KEA+ I +++ + + K
Sbjct: 304 AKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAK 357
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/488 (45%), Positives = 311/488 (63%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG ++H ++ G S + LV +Y CG + A +LF+ M E
Sbjct: 158 EGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAE-------------- 203
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++ V W ++I+G NG AL LFREM V P+ T+V
Sbjct: 204 ------------------RNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMV 245
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+LSAC++LGAL LGR H YM K +D N G AL+++Y++CG I +A +VF+EM+E+
Sbjct: 246 SLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEK 305
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
V ++ SLI GLA++G EA+E+F+E+ +G+ P+++TFVGVL ACSH G+VD GF+ F
Sbjct: 306 SVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYF 365
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ M +YGI P+IEHYGC+VDLL R G ++A++FI NM + P+ ++ +LL AC IHG
Sbjct: 366 KRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGH 425
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
L LGE +LL SG YVLLSN YAS +W + ++R M GV+K PG S +E
Sbjct: 426 LALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVE 485
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+ N +HEF++GD HPQ E+IY K+ E+ +++KLEGY P VL DIE+ EKE AL+ H
Sbjct: 486 LRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHISNVLADIEEEEKETALSYH 545
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE++AI + LI+T IRVVKNLRVC DCH IKLI+ + R+I+VRDR+RFHHF++G
Sbjct: 546 SEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAIKLISKVFDREIVVRDRSRFHHFKDG 605
Query: 481 TCSCGDYW 488
CSC DYW
Sbjct: 606 HCSCKDYW 613
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 114/212 (53%), Gaps = 1/212 (0%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A ++FS+++ + W MI G + AL+L+R+M + P+ T +L A ++
Sbjct: 93 AHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAK 152
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
L + G +HS ++ + V L++MY+ CG + A ++FE M ER++ T+NS+
Sbjct: 153 LMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSV 212
Query: 189 IAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYG 248
I G A++GR EA+ +FREM +G+ P T V +L+AC+ G + LG M + G
Sbjct: 213 INGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVK-VG 271
Query: 249 IEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
++ + ++DL ++ G +A+ M+
Sbjct: 272 LDGNLHAGNALLDLYAKCGSIRQAHKVFDEME 303
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 42/254 (16%)
Query: 136 RWIHSYMGKHRIDL-NHIVGGALI-NMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLA 193
R IH++ +H + L N +G LI + S C + A Q+F +++ ++ T+N++I G A
Sbjct: 57 RQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYA 116
Query: 194 MHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HGGLVDLGFE---- 238
+ A+E++R+M I P T+ +L A + H + GFE
Sbjct: 117 ESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVF 176
Query: 239 IFQSMTRDYG---------------IEPQIEHYGCIVDLLSRVGRPEEAYDFITNM---K 280
+ ++ Y E + + +++ + GRP EA M
Sbjct: 177 VQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRG 236
Query: 281 IAPDHIMLGSLLSACKIHGKLQLGEQ----IAKRLLDCRSADSGTYVLLSNAYASSGKWK 336
+ PD + SLLSAC G L LG + + K LD + +G +L + YA G +
Sbjct: 237 VEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLD-GNLHAGNALL--DLYAKCGSIR 293
Query: 337 EAVQIRAKMKEAGV 350
+A ++ +M+E V
Sbjct: 294 QAHKVFDEMEEKSV 307
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/489 (45%), Positives = 316/489 (64%), Gaps = 2/489 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
E +IH Q+ KLG ++ L+ Y G FK A LFD +P+ D V+ +I Y
Sbjct: 162 ETTQIHAQITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPK-PDAVSWNSVIKGY 220
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ G ++ A +F ++ K+ + WT MI G V+ G AL LF EMQ +V P+ V++
Sbjct: 221 AKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLA 280
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
LSAC+QLGALE G+WIHSY+ K RI ++ ++G LI+MY++CGD+ +AL+VF+ ++ +
Sbjct: 281 NALSACAQLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRK 340
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
V + +LI+G A HG EA+ F EM GI+P +TF VL ACS+ GLV+ G IF
Sbjct: 341 SVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIF 400
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+M RDY ++P IEHYGC+VDLLSR G +EA FI M + P+ ++ G+LL AC+IH
Sbjct: 401 YNMERDYNLKPTIEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKN 460
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++LGE+I + L+ G YV +N +A KW +A + R MKE GV K PGCS+I
Sbjct: 461 IELGEEIGEILIAIDPYHGGRYVHKANIHAMGKKWDKAAETRRLMKEQGVAKVPGCSTIS 520
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPS-TEVVLHDIEDWEKEWALAI 419
+ HEF+ GD HP+ E+I K + +++ ++ GY P +++L ++D E+E +
Sbjct: 521 LEGTTHEFLAGDRSHPEIEKIQSKWKIMRRKLEENGYVPELEDMLLDLVDDDERETIVHQ 580
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI YGLI TKP TTIR++KNLRVC DCH + KLI+ I KR I++RDR RFHHF +
Sbjct: 581 HSEKLAITYGLIKTKPGTTIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRD 640
Query: 480 GTCSCGDYW 488
G CSCGDYW
Sbjct: 641 GKCSCGDYW 649
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 114/268 (42%), Gaps = 37/268 (13%)
Query: 48 NDVVASTVMINCYVEH---GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLF 104
D A T ++C + + A VF DT W MI G + E R+L L+
Sbjct: 73 QDSYAITKFLSCCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLY 132
Query: 105 REMQRDNVRPNEVTIVCVLSACSQLGALELGRWIH--------------------SYMGK 144
+ M + N T +L ACS L ALE IH SY
Sbjct: 133 QRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKLGYENDVYAVNSLINSYAAT 192
Query: 145 HRIDLNHIV-----------GGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLA 193
L H++ ++I Y++ G +D AL +F +M E++ ++ ++I+G
Sbjct: 193 GNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYV 252
Query: 194 MHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQI 253
G EA+++F EM N + P V+ L+AC+ G ++ G I +T+ +
Sbjct: 253 QAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMDSV 312
Query: 254 EHYGCI-VDLLSRVGRPEEAYDFITNMK 280
GC+ +D+ ++ G EA + N++
Sbjct: 313 --LGCVLIDMYAKCGDMGEALEVFKNIQ 338
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/491 (42%), Positives = 310/491 (63%), Gaps = 5/491 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +HG +L++GL+ + L+ LYGKCGE DA ++FD M DV + ++ Y
Sbjct: 190 GKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNM-TIRDVSSWNALLAGYT 248
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN--VRPNEVTI 119
+ G ++ A +F R+ ++ V WT MI G ++G +AL LF EM +++ VRPN VTI
Sbjct: 249 KSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTI 308
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
+ VL AC+QL LE GR IH + ++ N V AL MY++CG + A F+++
Sbjct: 309 MSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNR 368
Query: 179 -ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
E+++ +N++I A +G ++AV FREMI GI+P +TF G+L+ CSH GLVD+G
Sbjct: 369 NEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGL 428
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
+ F M+ Y I P++EHY C+ DLL R GR EA + M + + GSLL+AC+
Sbjct: 429 KYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRK 488
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
H L++ E A++L ++G YVLLSN YA +G+W+E ++RA +K G +K PGCS
Sbjct: 489 HRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCS 548
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IE+N + H F+ GD HPQ ++IY ++ L + +K GY P T VLHDI + EKE+ L
Sbjct: 549 WIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNL 608
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LA+ +G+++T T +RV KNLR+C DCH+ + I+ I R++IVRD NRFHHF
Sbjct: 609 IAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHHF 668
Query: 478 ENGTCSCGDYW 488
+ G CSCGDYW
Sbjct: 669 KGGCCSCGDYW 679
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 140/312 (44%), Gaps = 29/312 (9%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
M+ Y G ++++ VF+ + ++ + +MI R G R + + M +
Sbjct: 111 MVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGD 170
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
T VL + +L ++ +G+ +H + + + + V +LI +Y +CG+I+ A +VF+
Sbjct: 171 YFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFD 230
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
M RDV+++N+L+AG G A+ +F M + I V++ +++ S GL
Sbjct: 231 NMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNI----VSWTTMISGYSQSGLAQQ 286
Query: 236 GFEIFQSMTR-DYGIEPQIEHYGCIVDL---LSRVGRPEEAYDFITNMKIAPDHIML--- 288
+F M + D G+ P ++ LS + R + ++ M + + +L
Sbjct: 287 ALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIAL 346
Query: 289 -------GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQI 341
GSL+ A KL E K L+ + + AYAS G +AV
Sbjct: 347 TAMYAKCGSLVDARNCFDKLNRNE---KNLI--------AWNTMITAYASYGHGLQAVST 395
Query: 342 RAKMKEAGVQKE 353
+M +AG+Q +
Sbjct: 396 FREMIQAGIQPD 407
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 121/285 (42%), Gaps = 52/285 (18%)
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
P ++ V + L L+LG +H++M + +VG ++ Y+ GDID ++ V
Sbjct: 68 PPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSV 127
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA------- 226
F + E +NS+I A +G + V + M + G TF VL +
Sbjct: 128 FNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSV 187
Query: 227 ----CSHGGLVDLG--FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
C HG ++ +G F+++ + + ++ L + G +A NM
Sbjct: 188 WMGKCVHGLILRIGLQFDLYVATS--------------LIILYGKCGEINDAGKVFDNMT 233
Query: 281 I----APDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWK 336
I + + ++ G S C I L + E++ R + ++ + + Y+ SG +
Sbjct: 234 IRDVSSWNALLAGYTKSGC-IDAALAIFERMPWR-------NIVSWTTMISGYSQSGLAQ 285
Query: 337 EAVQIRAKM--KEAGVQKE--------PGC---SSIEVNNEIHEF 368
+A+ + +M +++GV+ P C S++E +IHE
Sbjct: 286 QALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHEL 330
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 205/488 (42%), Positives = 317/488 (64%), Gaps = 2/488 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+ H Q L G + LV++Y KCGE +DA LFDE+ N +V+ T MI YV
Sbjct: 95 GRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRN-IVSWTSMITGYV 153
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN-VRPNEVTIV 120
++ A VF + +D + W ++I +NG ++++F M +D + N VT+
Sbjct: 154 QNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLS 213
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL AC+ G+ LG+ IH + K ++ N VG ++I+MY +CG ++ A + F+ M+E+
Sbjct: 214 AVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREK 273
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+V ++++++AG MHG + EA+E+F EM G++P +TFV VL ACSH GL++ G+ F
Sbjct: 274 NVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWF 333
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
++M+ ++ +EP +EHYGC+VDLL R G +EA+D I MK+ PD ++ G+LL AC++H
Sbjct: 334 KAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKN 393
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+ LGE A++L + + G YVLLSN YA +G+W++ ++R MK +G+ K PG S ++
Sbjct: 394 VDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVD 453
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+ +H F++GD HPQ E+IY+ +++L ++ GY P VLHD+ EKE L +H
Sbjct: 454 IKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVH 513
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LA+ +G+++T P TTI ++KNLRVC DCH+ IK I+ I R+I+VRD RFHHF +G
Sbjct: 514 SEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDG 573
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 574 LCSCGDYW 581
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 141/339 (41%), Gaps = 69/339 (20%)
Query: 76 VKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELG 135
V + W ++I L R+G+ AL F M++ +++PN T C + +CS L L G
Sbjct: 36 VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSG 95
Query: 136 RWIHSYMGKHRIDLNHIVGGALINMYSRCG------------------------------ 165
R H + + V AL++MYS+CG
Sbjct: 96 RQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQN 155
Query: 166 -DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGV 223
D +AL+VF+ M ERDV ++NS+IA A +G S E++E+F M+ G I VT V
Sbjct: 156 DDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAV 215
Query: 224 LNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE------------- 270
L AC+H G LG I + + G+E + I+D+ + G+ E
Sbjct: 216 LLACAHSGSQRLGKCIHDQVIK-MGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKN 274
Query: 271 ------------------EAYDFITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQIAK 309
EA + M +A P++I S+L+AC G L+ G K
Sbjct: 275 VKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFK 334
Query: 310 RLLDCRSADSGT--YVLLSNAYASSGKWKEAVQIRAKMK 346
+ + G Y + + +G KEA + MK
Sbjct: 335 AMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMK 373
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/487 (44%), Positives = 318/487 (65%), Gaps = 1/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +HG +K G + + L+ +Y + G ++F + E D+V T M++
Sbjct: 130 GSSVHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRVFSSICE-PDLVCQTAMVSACA 188
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G V A ++F ++ KD + W AMI G V+ G+ AL LF MQR+ V+ NEV++V
Sbjct: 189 KMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVS 248
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLSACS LGAL+ GRW H+Y+ ++++ + +G ALI+MY++CG+++KA++VF MKE++
Sbjct: 249 VLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEKN 308
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V T++S I GLAM+G + +E+F M ++P ++TFV VL CS GLV+ G + F+
Sbjct: 309 VYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEEGRKHFE 368
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM++ YGIEP++EHYGC+VDL R G +EA +FI +M + P G+LL+ACKI+ +
Sbjct: 369 SMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALLNACKIYRNM 428
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++GE ++++++ + + G YVLLSN YA S W +R M GV+K+PGCS IEV
Sbjct: 429 EMGELASRKIVELEAKNHGAYVLLSNIYADSKDWDRVSNVRQTMNVKGVRKQPGCSVIEV 488
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
E+HEF +GD HP+ +I + E+ + +KL GY +T V DIE+ EKE AL +HS
Sbjct: 489 GGEVHEFFVGDKSHPRYAEIQVMLGEISRRLKLSGYVANTNPVFFDIEEEEKEDALCMHS 548
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E++AI +GLIS P IR+VKNLRVC DCH K+I+ R+I+VRDRNRFHHF +G
Sbjct: 549 EKIAIAFGLISLSPDVPIRIVKNLRVCWDCHDATKMISKAFNREIVVRDRNRFHHFRDGE 608
Query: 482 CSCGDYW 488
CSC YW
Sbjct: 609 CSCKGYW 615
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 49/213 (23%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR H + + LR + L+++Y KCG AM
Sbjct: 261 QGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAM---------------------- 298
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
EVF +K K+ W++ I GL NG + L+LF M++D+V+PNE+T V
Sbjct: 299 ----------EVFWGMKEKNVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFV 348
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG--------GALINMYSRCGDIDKALQ 172
VL CS +G +E GR KH ++ + G G ++++Y R G +D+AL
Sbjct: 349 SVLRGCSVVGLVEEGR-------KHFESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALN 401
Query: 173 VFEEMKERD-VTTYNSLIAGLAMHGRSIEAVEM 204
M R V + +L+ ++ R++E E+
Sbjct: 402 FINSMPVRPHVGAWGALLNACKIY-RNMEMGEL 433
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 207/487 (42%), Positives = 314/487 (64%), Gaps = 2/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H +K G + N L+ +YGKC + Q+F+ M D V+ I V
Sbjct: 437 GRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRM-RVKDTVSWNSFIAALV 495
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ ++E+A +F + +D V WT +I + A++ F+ M ++ +PN +
Sbjct: 496 QNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTI 555
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+LS C LG+ +LG+ IH+ KH +D IV AL++MY +CG D +VF+ M+ERD
Sbjct: 556 LLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCADSH-KVFDSMEERD 614
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ T+N+ I G A HG EA++M+ M + G+ P +VTFVG+LNACSH GLVD G++ F+
Sbjct: 615 IFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFK 674
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM+RDYG+ P +EHY C+VDLL R G + A FI +M I PD ++ +LL ACKIH
Sbjct: 675 SMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNA 734
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++G + A++L +++G YV+LSN Y+S G W E ++R MK+ GV KEPGCS +++
Sbjct: 735 EIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQI 794
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N++H F+ GD +H + E+I +Q+L +++ GY P TE VLHDI++ +KE +L HS
Sbjct: 795 RNKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTGYVPDTEFVLHDIDEEQKESSLLYHS 854
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ YGL+ T I+++KNLR+C DCH+ IK ++++TKR I +RD NRFHHF NG+
Sbjct: 855 EKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSHVTKRDIDIRDGNRFHHFRNGS 914
Query: 482 CSCGDYW 488
CSCGD+W
Sbjct: 915 CSCGDFW 921
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 141/288 (48%), Gaps = 38/288 (13%)
Query: 20 TRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVK 79
++ L+ +CG +A LF+++P+ VV+ MI Y+++G+V+ A E+F R+ +
Sbjct: 323 SQTALLTGLARCGRITEARILFEQIPD-PIVVSWNAMITGYMQNGMVDEAKELFDRMPFR 381
Query: 80 DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIH 139
+T+ W MI G +NG ALDL + + R+ + P+ ++ ACS +GALE GR +H
Sbjct: 382 NTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVH 441
Query: 140 SYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSI 199
S K N V ALI+MY +C +++ QVF M+ +D ++NS IA L +
Sbjct: 442 SLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLE 501
Query: 200 EAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI 259
+A +F M+++ + V++ +++A + D E F++M ++
Sbjct: 502 DARHIFDNMLSRDV----VSWTTIISAYAQAERGDEAVEFFKTMLHEHE----------- 546
Query: 260 VDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQI 307
P+ +L LLS C G +LG+QI
Sbjct: 547 ----------------------KPNSPILTILLSVCGGLGSAKLGQQI 572
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 150/353 (42%), Gaps = 68/353 (19%)
Query: 17 NRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVE--------- 67
N T L+ Y + G DA ++FD MPE N VA M++CYV++G +
Sbjct: 94 NVRTATILLSGYARLGRVLDARRVFDGMPERN-TVAWNAMVSCYVQNGDITMARRLFDAM 152
Query: 68 ----------------------NAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
+A+ +F ++ ++ V WT MI G VR + + D+FR
Sbjct: 153 PSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFR 212
Query: 106 EMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSR-C 164
M + P++ VLSA + L L + + + K + + ++G +++N+Y+R
Sbjct: 213 MMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDA 272
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMF------------------- 205
+D A++ F+ M ER+ T++++IA L+ GR A+ ++
Sbjct: 273 SALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLA 332
Query: 206 --------REMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYG 257
R + Q P V++ ++ G+VD E+F M I +
Sbjct: 333 RCGRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTIS-----WA 387
Query: 258 CIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQI 307
++ ++ GR EEA D + + + P L S AC G L+ G Q+
Sbjct: 388 GMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQV 440
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 118/253 (46%), Gaps = 17/253 (6%)
Query: 15 RSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFS 74
+S S R++ EL + G ++A ++FD MP D++A MI+ Y G++E+A +F
Sbjct: 33 KSAHSARIR--EL-ARLGRLREAREVFDAMPH-RDIIAWNSMISAYCNSGMLEDARILFD 88
Query: 75 RVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALEL 134
+ + T ++ G R G + A +F M N + C + Q G + +
Sbjct: 89 AISGGNVRTATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYV----QNGDITM 144
Query: 135 GRWIHSYMGKHRI-DLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLA 193
R + M + N +V G Y + A +F++M +R++ T+ +I+G
Sbjct: 145 ARRLFDAMPSRDVTSWNSMVTG-----YCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYV 199
Query: 194 MHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG-FEIFQSMTRDYGIEPQ 252
+ + ++FR M ++G P + F VL+A + GL DLG E+ + + G E
Sbjct: 200 RIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVT--GLQDLGVLEVLRPLVLKTGFESD 257
Query: 253 IEHYGCIVDLLSR 265
+ I+++ +R
Sbjct: 258 VVIGTSILNVYTR 270
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 13/216 (6%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D A + I G + A EVF + +D + W +MI +G + A LF +
Sbjct: 32 DKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAIS 91
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
NVR T +LS ++LG + R + M + N + A+++ Y + GDI
Sbjct: 92 GGNVR----TATILLSGYARLGRVLDARRVFDGMPER----NTVAWNAMVSCYVQNGDIT 143
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A ++F+ M RDVT++NS++ G + ++A +F++M + + V G +
Sbjct: 144 MARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQ 203
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLS 264
HG G++IF+ M + G P ++ ++ ++
Sbjct: 204 HGK----GWDIFRMMHHE-GASPDQSNFASVLSAVT 234
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/491 (43%), Positives = 313/491 (63%), Gaps = 3/491 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCG--EFKDAMQLFDEMPECN-DVVASTVMI 57
EG + ++L G+ N T L LV+ G G E + F +V +T I
Sbjct: 311 EGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFI 370
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y + G V +A VF K KD + W+AMI +N + A D+F M +RPNE
Sbjct: 371 DMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNER 430
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T+V +L C++ G+LE+G+WIHSY+ K I + I+ + ++MY+ CGDID A ++F E
Sbjct: 431 TMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEA 490
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
+RD++ +N++I+G AMHG A+E+F EM G+ P +TF+G L+ACSH GL+ G
Sbjct: 491 TDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGK 550
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
+F M ++G P++EHYGC+VDLL R G +EA++ I +M + P+ + GS L+ACK+
Sbjct: 551 RLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKL 610
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
H ++LGE AK+ L SG VL+SN YAS+ +W + IR MK+ G+ KEPG S
Sbjct: 611 HKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVS 670
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
SIEVN +HEFI+GD HP +++Y+ + E+++ ++ GY+P VLH+I+ +K AL
Sbjct: 671 SIEVNGLLHEFIMGDREHPDAKKVYEMIDEMREKLEDAGYTPDVSCVLHNIDKEKKVSAL 730
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LA+ YGLIST P IR+VKNLRVC+DCH+ KL++ I R+IIVRDRNRFHHF
Sbjct: 731 NYHSEKLAMAYGLISTAPGVPIRIVKNLRVCDDCHNATKLLSKIYGREIIVRDRNRFHHF 790
Query: 478 ENGTCSCGDYW 488
+ G+CSC DYW
Sbjct: 791 KEGSCSCCDYW 801
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 156/321 (48%), Gaps = 23/321 (7%)
Query: 29 GKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMI 88
GKCG+ +P C T +I+ YV+ + A VF + + WTAMI
Sbjct: 255 GKCGK--------SGVPLC------TALIDMYVKCENLAYARRVFDGLSKASIISWTAMI 300
Query: 89 DGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRID 148
+ + + LF +M + + PNE+T++ ++ C GALELG+ +H++ ++
Sbjct: 301 AAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFT 360
Query: 149 LNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM 208
L+ ++ A I+MY +CGD+ A VF+ K +D+ ++++I+ A + EA ++F M
Sbjct: 361 LSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHM 420
Query: 209 INQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGR 268
GIRP + T V +L C+ G +++G I S GI+ + VD+ + G
Sbjct: 421 TGCGIRPNERTMVSLLMICAKAGSLEMGKWI-HSYIDKQGIKGDMILKTSFVDMYANCGD 479
Query: 269 PEEAYDFITNMKIAPDHIMLGSLLSACKIHG----KLQLGEQIAKRLLDCRSADSGTYVL 324
+ A+ D M +++S +HG L+L E++ + + + T++
Sbjct: 480 IDTAHRLFAE-ATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGV---TPNDITFIG 535
Query: 325 LSNAYASSGKWKEAVQIRAKM 345
+A + SG +E ++ KM
Sbjct: 536 ALHACSHSGLLQEGKRLFHKM 556
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 138/299 (46%), Gaps = 45/299 (15%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV +I Y E G + A +F +++ KD V W+ MI R+G + ALDL R+M
Sbjct: 158 DVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMH 217
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM------GKHRIDLNHIVGGALINMYS 162
V+P+E+ ++ + ++L L+LG+ +H+Y+ GK + L ALI+MY
Sbjct: 218 VMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPL----CTALIDMYV 273
Query: 163 RCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVG 222
+C ++ A +VF+ + + + ++ ++IA E V +F +M+ +G+ P ++T +
Sbjct: 274 KCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLS 333
Query: 223 VLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRP------------- 269
++ C G ++LG ++ + T G + +D+ + G
Sbjct: 334 LVKECGTAGALELG-KLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSK 392
Query: 270 ------------------EEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQI 307
+EA+D +M I P+ + SLL C G L++G+ I
Sbjct: 393 DLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWI 451
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 81/160 (50%)
Query: 87 MIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHR 146
+I ++N A A ++ M+ + + I VL AC + + LG+ +H ++ K+
Sbjct: 95 LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154
Query: 147 IDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
+ V ALI MYS G + A +F++++ +DV +++++I G EA+++ R
Sbjct: 155 FHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLR 214
Query: 207 EMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRD 246
+M ++P+++ + + + + + LG + + R+
Sbjct: 215 DMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRN 254
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 211/491 (42%), Positives = 310/491 (63%), Gaps = 5/491 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +HG +L++GL+ + L+ LYGKCGE DA ++FD M DV + ++ Y
Sbjct: 153 GKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNM-TIRDVSSWNALLAGYT 211
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN--VRPNEVTI 119
+ G ++ A +F R+ ++ V WT MI G ++G +AL LF EM +++ VRPN VTI
Sbjct: 212 KSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTI 271
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
+ VL AC+QL LE GR IH + ++ N V AL MY++CG + A F+++
Sbjct: 272 MSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNR 331
Query: 179 -ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
E+++ +N++I A +G ++AV FREMI GI+P +TF G+L+ CSH GLVD+G
Sbjct: 332 NEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGL 391
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
+ F M+ Y I P++EHY C+ DLL R GR EA + M + + GSLL+AC+
Sbjct: 392 KYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRK 451
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
H L++ E A++L ++G YVLLSN YA +G+W+E ++RA +K G +K PGCS
Sbjct: 452 HRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCS 511
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IE+N + H F+ GD HPQ ++IY ++ L + +K GY P T VLHDI + EKE+ L
Sbjct: 512 WIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNL 571
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LA+ +G+++T T +RV KNLR+C DCH+ + I+ I R++IVRD NRFHHF
Sbjct: 572 IAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHHF 631
Query: 478 ENGTCSCGDYW 488
+ G CSCGDYW
Sbjct: 632 KGGCCSCGDYW 642
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 115/250 (46%), Gaps = 29/250 (11%)
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T VL + +L ++ +G+ +H + + + + V +LI +Y +CG+I+ A +VF+ M
Sbjct: 136 TFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNM 195
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
RDV+++N+L+AG G A+ +F M + I V++ +++ S GL
Sbjct: 196 TIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNI----VSWTTMISGYSQSGLAQQAL 251
Query: 238 EIFQSMTR-DYGIEPQIEHYGCIVDL---LSRVGRPEEAYDFITNMKIAPDHIML----- 288
+F M + D G+ P ++ LS + R + ++ M + + +L
Sbjct: 252 SLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTA 311
Query: 289 -----GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRA 343
GSL+ A KL E K L+ + + AYAS G +AV
Sbjct: 312 MYAKCGSLVDARNCFDKLNRNE---KNLI--------AWNTMITAYASYGHGLQAVSTFR 360
Query: 344 KMKEAGVQKE 353
+M +AG+Q +
Sbjct: 361 EMIQAGIQPD 370
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 209/465 (44%), Positives = 308/465 (66%), Gaps = 2/465 (0%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
++ Y + + + A +LFD+MP N +T M+ Y + G ++ A +F + +D +
Sbjct: 314 MIAGYVQSQQIEKARELFDQMPSRNTSSWNT-MVTGYAQCGNIDQAKILFDEMPQRDCIS 372
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W AMI G ++G+ AL LF +M+RD N + C LS+C+++ ALELG+ +H +
Sbjct: 373 WAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLV 432
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
K +I G AL+ MY +CG I++A VFE++ E+D+ ++N++IAG A HG EA+
Sbjct: 433 KAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALA 492
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
+F M I+P VT VGVL+ACSH GLVD G E F SM ++YGI +HY C++DLL
Sbjct: 493 LFESM-KMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLL 551
Query: 264 SRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV 323
R GR +EA + + +M PD G+LL A +IHG +LGE+ A+++ + +SG YV
Sbjct: 552 GRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYV 611
Query: 324 LLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYK 383
LLSN YA+SG+W+E ++R+KM++ GV+K PG S +E+ N+ H F +GD HP+ E+IY
Sbjct: 612 LLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYA 671
Query: 384 KMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVK 443
++EL +K +G+ ST++VLHD+E+ EKE L HSE+LA+ +G++S P IRV+K
Sbjct: 672 YLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIK 731
Query: 444 NLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
NLRVC DCH+ IK I+ IT+R+IIVRD NRFHHF G+CSCGDYW
Sbjct: 732 NLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 159/338 (47%), Gaps = 28/338 (8%)
Query: 15 RSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFS 74
R + T ++ Y +F A ++F++MP+ D+++ VM++ YV++G + A +F+
Sbjct: 88 RRSTVTYNAMISGYLSNNKFDCARKVFEKMPD-RDLISWNVMLSGYVKNGNLSAARALFN 146
Query: 75 RVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALEL 134
++ KD V W AM+ G +NG + A +F +M + NE++ +LSA Q G +E
Sbjct: 147 QMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIED 202
Query: 135 GRWIH-SYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLA 193
R + S M + N ++GG Y R +D A +F+ M RD ++N +I G A
Sbjct: 203 ARRLFDSKMDWEIVSWNCLMGG-----YVRKKRLDDARSLFDRMPVRDKISWNIMITGYA 257
Query: 194 MHGRSIEAVEMFREMINQGIRPTKVTF--VGVLNACSHGGLVDLGFEIFQSMTRDYGIEP 251
+G EA +F E+ P + F +++ G++D IF+ M +
Sbjct: 258 QNGLLSEARRLFEEL------PIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSW 311
Query: 252 QIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
G + ++ + E +D + + + + M+ I L +++ +R
Sbjct: 312 NAMIAGYVQS--QQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQR- 368
Query: 312 LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
DC S + + + YA SG+ +EA+ + KMK G
Sbjct: 369 -DCIS-----WAAMISGYAQSGQSEEALHLFIKMKRDG 400
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 94/197 (47%), Gaps = 35/197 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++HG+++K G ++ L+ +YGKCG ++A +F+++ E D+V+ MI Y
Sbjct: 424 GKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITE-KDIVSWNTMIAGYA 482
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG + A +F +K+ ++P++VT+V
Sbjct: 483 RHGFGKEALALFESMKM--------------------------------TIKPDDVTLVG 510
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VLSACS G ++ G + +S + I N +I++ R G +D+AL + + M
Sbjct: 511 VLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFY 570
Query: 180 RDVTTYNSLIAGLAMHG 196
D T+ +L+ +HG
Sbjct: 571 PDAATWGALLGASRIHG 587
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 128/300 (42%), Gaps = 52/300 (17%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D+V I+ Y+ G E+A VF+ ++ + TV + AMI G + N + A +F +M
Sbjct: 58 SDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM 117
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
D + I +++ Y + G++
Sbjct: 118 P---------------------------------------DRDLISWNVMLSGYVKNGNL 138
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A +F +M E+DV ++N++++G A +G VE R++ +Q + ++++ G+L+A
Sbjct: 139 SAARALFNQMPEKDVVSWNAMLSGFAQNG----FVEEARKIFDQMLVKNEISWNGLLSAY 194
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
G ++ +F D ++ +I + C++ R R ++A M + D I
Sbjct: 195 VQNGRIEDARRLF-----DSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVR-DKIS 248
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+++ +G L ++ + L D + + + + +G EA +I +M E
Sbjct: 249 WNIMITGYAQNGLLSEARRLFEEL---PIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPE 305
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/491 (45%), Positives = 316/491 (64%), Gaps = 3/491 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFD---EMPECNDVVASTVMI 57
E ++ ++L++ L + T ++++ + G+ + EM +V T ++
Sbjct: 196 EAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLV 255
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y + G +E A VF + KD V W AMI G NG A+DLF +MQR+NV+P+
Sbjct: 256 DMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCY 315
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T+V VLSAC++LGALELG W+ + ++ N ++G ALI++Y++CG + +A +VF+ M
Sbjct: 316 TVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGM 375
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
KE+D +N++I+GLAM+G + +F ++ GI+P TF+G+L C+H GLVD G
Sbjct: 376 KEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGR 435
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F SM R + + P IEHYGC+VDLL R G +EA+ I NM + + I+ G+LL AC+I
Sbjct: 436 RYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRI 495
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
H QL E K+L++ +SG YVLLSN Y+++ KW EA ++R M E +QK PGCS
Sbjct: 496 HRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCS 555
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IEV+ +HEF++GD HP E+IY K+ EL + +K+ GY P+T+ VL DIE+ EKE L
Sbjct: 556 WIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTTDFVLFDIEEEEKEHFL 615
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LAI +GLIS P IRVVKNLRVC DCH IKLI++IT R+I VRD NRFH F
Sbjct: 616 GCHSEKLAIAFGLISATPTAVIRVVKNLRVCGDCHMAIKLISSITGREITVRDNNRFHCF 675
Query: 478 ENGTCSCGDYW 488
G+CSC DYW
Sbjct: 676 REGSCSCNDYW 686
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 153/256 (59%), Gaps = 4/256 (1%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV T ++ Y + G +E+A +VF + K+ V WTA+I G + G+ A+D+FR +
Sbjct: 146 DVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLL 205
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
N+ P+ TIV VLSAC+QLG L G WIH + + + N VG +L++MY++CG+++
Sbjct: 206 EMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNME 265
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
KA VF+ M E+D+ ++ ++I G A++G EA+++F +M + ++P T VGVL+AC+
Sbjct: 266 KARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACA 325
Query: 229 HGGLVDLGFEIFQSMTRD-YGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
G ++LG + + R+ + P + ++DL ++ G A++ MK D ++
Sbjct: 326 RLGALELGEWVSGLVDRNEFLYNPVLGT--ALIDLYAKCGSMSRAWEVFKGMK-EKDRVV 382
Query: 288 LGSLLSACKIHGKLQL 303
+++S ++G +++
Sbjct: 383 WNAIISGLAMNGYVKI 398
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 160/337 (47%), Gaps = 38/337 (11%)
Query: 47 CNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
C+D +++ C + +F ++K + W MI GLV N A++ +
Sbjct: 43 CHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGL 102
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M+ + PN T VL AC++L L+LG IH+ + K D + V +L+ +Y++CG
Sbjct: 103 MRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGY 162
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
++ A +VF+++ +++V ++ ++I+G G+ EA++MFR ++ + P T V VL+A
Sbjct: 163 LEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSA 222
Query: 227 CSHGGLVDLGFEIFQ-----SMTRDYGI-------------------------EPQIEHY 256
C+ G ++ G I + M R+ + E I +
Sbjct: 223 CTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSW 282
Query: 257 GCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
G ++ + G P+EA D M+ + PD + +LSAC G L+LGE ++ L+D
Sbjct: 283 GAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSG-LVD 341
Query: 314 CRSADSGTYVL---LSNAYASSGKWKEAVQIRAKMKE 347
R+ VL L + YA G A ++ MKE
Sbjct: 342 -RNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKE 377
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 209/486 (43%), Positives = 314/486 (64%), Gaps = 3/486 (0%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELY-GKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
+H ++LGL L+ ++ G G DA L D +I +
Sbjct: 114 VHAHAVRLGLAGFLLVNNALIRVHAGLLGRLADA-HLLLRTSAAVDASTFNTLITAHARA 172
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
G V +A +F + ++ V W+AM++G V+ G+ AL +F +MQ VRP++ +V VL
Sbjct: 173 GRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVL 232
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
+AC+QLGALE G+W+H Y+ + I + +G AL++MY++CG++ ++VFE MK+++V
Sbjct: 233 AACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVL 292
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
+ ++I GLAMHGR +++ +F +M + G++P + F+G L AC+H GLVD G E+F SM
Sbjct: 293 AWTTMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDKGRELFNSM 352
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQL 303
+YGI+P+IEHYGC+VDLL+R G EA D + M + PD ++ G+L++ C+ H ++L
Sbjct: 353 VNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALMAGCRFHKNVEL 412
Query: 304 GEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNN 363
E + K ++ SG YVLL N Y++SG+ A +IR M+E GV+K PGCS++E+
Sbjct: 413 AEYVIKHWIELEPDKSGAYVLLGNIYSASGRHASAREIRNLMREKGVEKTPGCSNVEIKG 472
Query: 364 EIHEFILGDIRHPQREQIYKKMQELKQIVKL-EGYSPSTEVVLHDIEDWEKEWALAIHSE 422
IH+FI+GD+ HP+ + I K E+ ++L EGY P + VL DIE+ E E AL+ HSE
Sbjct: 473 VIHQFIVGDLSHPRIKDILTKWYEIDSRIRLEEGYVPDKKEVLLDIEEEEMESALSRHSE 532
Query: 423 RLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTC 482
+LAI + LIST+ Y IR+VKNLRVC DCH + KLI+ + R+IIVRDR RFH F++GTC
Sbjct: 533 KLAIAFALISTEDYMPIRIVKNLRVCQDCHHVTKLISKVYGREIIVRDRTRFHLFKDGTC 592
Query: 483 SCGDYW 488
SC DYW
Sbjct: 593 SCKDYW 598
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 97/207 (46%), Gaps = 39/207 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ +HG + +R LV++Y KCGE + M++F+ M + N V+A T MI
Sbjct: 243 QGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKN-VLAWTTMIK-- 299
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
GL +G + +L LF +M+ V+P+++ +
Sbjct: 300 -----------------------------GLAMHGRGSDSLTLFSQMESSGVKPDDIAFI 330
Query: 121 CVLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
L AC+ G ++ GR + + M + + + H G ++++ +R G + +A + E+M
Sbjct: 331 GALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHY--GCMVDLLARNGLLSEARDMVEKM 388
Query: 178 KER-DVTTYNSLIAGLAMHGRSIEAVE 203
+ D + +L+AG H +++E E
Sbjct: 389 PMKPDALIWGALMAGCRFH-KNVELAE 414
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 213/490 (43%), Positives = 323/490 (65%), Gaps = 5/490 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H Q+L LGL ++ + L+ +Y CG A Q FDE+ + D+ + +I+
Sbjct: 79 GRQLHAQILLLGLANDPFVQTSLINMYSSCGTPTFARQAFDEITQ-PDLPSWNAIIHANA 137
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR---DNVRPNEVT 118
+ G++ A ++F ++ K+ + W+ MI G V GE AL LFR +Q +RPNE T
Sbjct: 138 KAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNEFT 197
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM- 177
+ VLSAC++LGAL+ G+W+H+Y+ K + ++ ++G +LI+MY++CG I++A +F+ +
Sbjct: 198 MSSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNLG 257
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
E+DV ++++I +MHG S E +E+F M+N G+RP VTFV VL AC HGGLV G
Sbjct: 258 PEKDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLCACVHGGLVSEGN 317
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
E F+ M +YG+ P I+HYGC+VDL SR GR E+A++ + +M + PD ++ G+LL+ +I
Sbjct: 318 EYFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNGARI 377
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
HG ++ E +LL+ A+S YVLLSN YA G+W+E +R M+ G++K PGCS
Sbjct: 378 HGDVETCEIAITKLLELDPANSSAYVLLSNVYAKLGRWREVRHLRDLMEVRGIKKLPGCS 437
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
+EV+ I EF GD HP+ +Y + E+ + ++ GY +T VL D+++ KE+AL
Sbjct: 438 LVEVDGVIREFFAGDNSHPELLNLYVMLDEIMKRLEKHGYERNTGEVLLDLDEEGKEFAL 497
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
++HSE+LAI Y + T P TTIR+VKNLR+C+DCH IK+I+ R+IIVRD NRFHHF
Sbjct: 498 SLHSEKLAIAYCFLRTSPGTTIRIVKNLRICSDCHVAIKIISKEFNREIIVRDCNRFHHF 557
Query: 478 ENGTCSCGDY 487
+NG CSC DY
Sbjct: 558 KNGLCSCKDY 567
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/490 (44%), Positives = 312/490 (63%), Gaps = 3/490 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
E +IH + K G + L+ Y G FK A LFD + E D V+ +I Y
Sbjct: 128 ETTQIHAHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQE-PDAVSWNSVIKGY 186
Query: 61 VEHGLVENAFEVFSRVKVKD-TVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
V+ G ++ A +F ++ K+ + WT MI G V+ G AL LF EMQ NV P+ V++
Sbjct: 187 VKAGEMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSL 246
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
LSACSQLGALE G+WIHSY K R ++ ++ LI+MY++CG++++AL VF+ MK
Sbjct: 247 ASALSACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKT 306
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+ V + +LI+G A HG EA+ F EM N G++P +TF VL ACS+ GLV+ G +
Sbjct: 307 KSVQVWTALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSV 366
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F ++ RDY ++P IEHYGC+VDLL R G EA FI M + P+ ++ GSLL AC+IH
Sbjct: 367 FNTIERDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIHK 426
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
++LGE+I + L++ S G YV ++N +A KW +A + R M+E GV K PGCS+I
Sbjct: 427 NIELGEKIGEILIEMDSNHGGRYVHMANIHAMGKKWDKAAETRRLMREQGVVKVPGCSAI 486
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD-IEDWEKEWALA 418
+ HEF+ GD H + ++I K + +++ ++ GY P E +L D ++D EKE +
Sbjct: 487 SLEGTTHEFLAGDRSHAEIQEIRTKWRFVRRKLEENGYVPELEDMLLDLVDDEEKEAIVH 546
Query: 419 IHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFE 478
HSE+LAI YGL+ TKP TTIR++KNLRVC DCH ++ LI+ I KR I++RDR RFHHF+
Sbjct: 547 QHSEKLAITYGLMKTKPGTTIRIMKNLRVCKDCHKVMNLISKIYKRDIVMRDRTRFHHFK 606
Query: 479 NGTCSCGDYW 488
+G CSCGDYW
Sbjct: 607 DGKCSCGDYW 616
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 119/278 (42%), Gaps = 44/278 (15%)
Query: 70 FEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQL 129
F F R DT W MI GL + + R+L L+ M + N T +L ACS L
Sbjct: 67 FNGFDR---PDTFLWNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNL 123
Query: 130 GALELGRWIHSYMGKHRIDLNHIVGGALINMYS--------------------------- 162
A + IH+++ K + +LIN Y+
Sbjct: 124 SAFQETTQIHAHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVI 183
Query: 163 ----RCGDIDKALQVFEEMKER-DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTK 217
+ G++D AL +F +M E+ + ++ ++I+G G + EA+++F EM N + P
Sbjct: 184 KGYVKAGEMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDN 243
Query: 218 VTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGC--IVDLLSRVGRPEEAYDF 275
V+ L+ACS G ++ G I + +I+ C ++D+ ++ G EEA
Sbjct: 244 VSLASALSACSQLGALEQGKWIHSYANK---TRTRIDSVLCCVLIDMYAKCGEMEEALGV 300
Query: 276 ITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
NMK + +L+S HG LG + + L+
Sbjct: 301 FKNMKTKSVQVWT-ALISGYAYHG---LGREAISKFLE 334
>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 210/494 (42%), Positives = 328/494 (66%), Gaps = 8/494 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ H Q+L GL + R L+ +Y CG+ A+++FDE D+ A ++N Y
Sbjct: 80 GQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLSSALRIFDESVS-KDLPAWNSVVNAYA 138
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN-----VRPNE 116
+ GL+ +A ++F + ++ + W+ +I+G V G+ ALDLFREMQ V PN+
Sbjct: 139 KAGLINHARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEVFVSPNK 198
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
T+ VLSAC +LGALE G+W+HSY+ K+ ++++ ++G ALI+MY++CG +++A +VF+
Sbjct: 199 FTMSTVLSACGRLGALEQGKWVHSYIDKYGVEIDIVLGTALIDMYAKCGSLERAKRVFDA 258
Query: 177 M-KERDVTTYNSLIAGLAMHGRSIEAVEMFREMI-NQGIRPTKVTFVGVLNACSHGGLVD 234
+ ++DV Y+++I LAM+G + E ++F EM + I P VTFVG+L AC H GL++
Sbjct: 259 LGSKKDVKAYSAMICCLAMYGLTDECFQVFSEMTTSNNINPNSVTFVGILGACVHRGLIN 318
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
G F+ MT ++GI P I+HYGC+VDL R G +EA FI +M + PD ++ GSLLS
Sbjct: 319 KGKSYFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 378
Query: 295 CKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
++ G ++ E KRL++ +SG YVLLSN YA +G+W E +IR +M+ G++K P
Sbjct: 379 SRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWIEVKRIRHEMEVKGIKKVP 438
Query: 355 GCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKE 414
GCS +EV +HEF++GD + E+IY ++E+ Q ++ GY T+ VL D+E+ +KE
Sbjct: 439 GCSYVEVEGVVHEFVVGDESQQESERIYAMLEEIMQRLREAGYVSDTKEVLLDLEEKDKE 498
Query: 415 WALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRF 474
AL+ HSE+LAI + L+ T+P T +R++KNLR+C DCH ++K+I+ + R+I+VRD NRF
Sbjct: 499 MALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRF 558
Query: 475 HHFENGTCSCGDYW 488
HHF +G+CSC D+W
Sbjct: 559 HHFSDGSCSCRDFW 572
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 40/232 (17%)
Query: 80 DTVCWTAMIDGLVRN---GEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGR 136
++ W +I +V N + + ++ M+ V P+ T +L + L LG+
Sbjct: 22 ESFVWNIIIRAIVHNVSPPQRHSPISVYFRMRHHCVSPDFHTFPFLLPSFHNPIHLPLGQ 81
Query: 137 WIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV----------------------- 173
H+ + +D + V +L+NMYS CGD+ AL++
Sbjct: 82 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLSSALRIFDESVSKDLPAWNSVVNAYAKAG 141
Query: 174 --------FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM----INQ-GIRPTKVTF 220
F+EM ER+V +++ LI G M G+ EA+++FREM N+ + P K T
Sbjct: 142 LINHARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFTM 201
Query: 221 VGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
VL+AC G ++ G + S YG+E I ++D+ ++ G E A
Sbjct: 202 STVLSACGRLGALEQG-KWVHSYIDKYGVEIDIVLGTALIDMYAKCGSLERA 252
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 87/200 (43%), Gaps = 36/200 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ +H + K G+ + L+++Y KCG + A ++FD + DV A + MI C
Sbjct: 216 QGKWVHSYIDKYGVEIDIVLGTALIDMYAKCGSLERAKRVFDALGSKKDVKAYSAMICCL 275
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+GL + F+VFS EM + +N+ PN VT V
Sbjct: 276 AMYGLTDECFQVFS---------------------EMTTS---------NNINPNSVTFV 305
Query: 121 CVLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+L AC G + G+ M + + H G ++++Y R G I +A M
Sbjct: 306 GILGACVHRGLINKGKSYFKMMTEEFGITPSIQHY--GCMVDLYGRSGLIKEAESFIASM 363
Query: 178 K-ERDVTTYNSLIAGLAMHG 196
E DV + SL++G M G
Sbjct: 364 PMEPDVLIWGSLLSGSRMLG 383
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/465 (44%), Positives = 307/465 (66%), Gaps = 2/465 (0%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
++ Y + + + A +LFD+MP N +T M+ Y + G ++ A +F + +D +
Sbjct: 314 MIAGYVQSQQIEKARELFDQMPSRNTSSWNT-MVTGYAQCGNIDQAKILFDEMPQRDCIS 372
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W AMI G ++G+ AL LF +M+RD N + C LS+C+++ ALELG+ +H +
Sbjct: 373 WAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLV 432
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
K +I G AL+ MY +CG I++A VFE++ E+D+ ++N++IAG A HG EA+
Sbjct: 433 KAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALA 492
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
+F M I+P VT VGVL+ACSH G VD G E F SM ++YGI +HY C++DLL
Sbjct: 493 LFESM-KMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLL 551
Query: 264 SRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV 323
R GR +EA + + +M PD G+LL A +IHG +LGE+ A+++ + +SG YV
Sbjct: 552 GRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYV 611
Query: 324 LLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYK 383
LLSN YA+SG+W+E ++R+KM++ GV+K PG S +E+ N+ H F +GD HP+ E+IY
Sbjct: 612 LLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYA 671
Query: 384 KMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVK 443
++EL +K +G+ ST++VLHD+E+ EKE L HSE+LA+ +G++S P IRV+K
Sbjct: 672 YLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIK 731
Query: 444 NLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
NLRVC DCH+ IK I+ IT+R+IIVRD NRFHHF G+CSCGDYW
Sbjct: 732 NLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 159/338 (47%), Gaps = 28/338 (8%)
Query: 15 RSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFS 74
R + T ++ Y +F A ++F++MP+ D+++ VM++ YV++G + A +F+
Sbjct: 88 RRSTVTYNAMISGYLSNNKFDCARKVFEKMPD-RDLISWNVMLSGYVKNGNLSAARALFN 146
Query: 75 RVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALEL 134
++ KD V W AM+ G +NG + A +F +M + NE++ +LSA Q G +E
Sbjct: 147 QMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIED 202
Query: 135 GRWIH-SYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLA 193
R + S M + N ++GG Y R +D A +F+ M RD ++N +I G A
Sbjct: 203 ARRLFDSKMDWEIVSWNCLMGG-----YVRKKRLDDARSLFDRMPVRDKISWNIMITGYA 257
Query: 194 MHGRSIEAVEMFREMINQGIRPTKVTF--VGVLNACSHGGLVDLGFEIFQSMTRDYGIEP 251
+G EA +F E+ P + F +++ G++D IF+ M +
Sbjct: 258 QNGLLSEARRLFEEL------PIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSW 311
Query: 252 QIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
G + ++ + E +D + + + + M+ I L +++ +R
Sbjct: 312 NAMIAGYVQS--QQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQR- 368
Query: 312 LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
DC S + + + YA SG+ +EA+ + KMK G
Sbjct: 369 -DCIS-----WAAMISGYAQSGQSEEALHLFIKMKRDG 400
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 94/197 (47%), Gaps = 35/197 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++HG+++K G ++ L+ +YGKCG ++A +F+++ E D+V+ MI Y
Sbjct: 424 GKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITE-KDIVSWNTMIAGYA 482
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG + A +F +K+ ++P++VT+V
Sbjct: 483 RHGFGKEALALFESMKM--------------------------------TIKPDDVTLVG 510
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VLSACS G ++ G + +S + I N +I++ R G +D+AL + + M
Sbjct: 511 VLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFY 570
Query: 180 RDVTTYNSLIAGLAMHG 196
D T+ +L+ +HG
Sbjct: 571 PDAATWGALLGASRIHG 587
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 128/300 (42%), Gaps = 52/300 (17%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D+V I+ Y+ G E+A VF+ ++ + TV + AMI G + N + A +F +M
Sbjct: 58 SDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM 117
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
D + I +++ Y + G++
Sbjct: 118 P---------------------------------------DRDLISWNVMLSGYVKNGNL 138
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A +F +M E+DV ++N++++G A +G VE R++ +Q + ++++ G+L+A
Sbjct: 139 SAARALFNQMPEKDVVSWNAMLSGFAQNG----FVEEARKIFDQMLVKNEISWNGLLSAY 194
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
G ++ +F D ++ +I + C++ R R ++A M + D I
Sbjct: 195 VQNGRIEDARRLF-----DSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVR-DKIS 248
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+++ +G L ++ + L D + + + + +G EA +I +M E
Sbjct: 249 WNIMITGYAQNGLLSEARRLFEEL---PIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPE 305
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/502 (44%), Positives = 327/502 (65%), Gaps = 14/502 (2%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLF-------------DEMPEC 47
+G++IHG LK G + LV +Y CG KDA LF D
Sbjct: 139 QGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIEREMVMMIDRRKRD 198
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+VV VMI+ Y+ G + A +F +++ + V W MI G +NG A+++FREM
Sbjct: 199 GEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREM 258
Query: 108 QR-DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
++ +++RPN VT+V VL A S+LG+LELG W+H Y I ++ ++G ALI+MYS+CG
Sbjct: 259 KKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGI 318
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
I+KA+ VFE + +V T++++I G A+HG++ +A++ F +M G+RP+ V ++ +L A
Sbjct: 319 IEKAIMVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTA 378
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
CSH GLV+ G F M G+EP+IEHYGC+VDLL R+G +EA +FI NM I PD +
Sbjct: 379 CSHAGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFILNMPIKPDDV 438
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
+ +LL AC++H +++G+++A L+D DSG YV LSN YAS G W E ++R +MK
Sbjct: 439 IWKALLGACRMHRNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMK 498
Query: 347 EAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH 406
E ++K+PGCS I+++ +HEF++ D HP+ ++I + E+ ++L GY P T VL
Sbjct: 499 EMDIRKDPGCSWIDIDGVLHEFLVEDDSHPRAKEINSMLVEISDKLRLAGYRPITTQVLL 558
Query: 407 DIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKI 466
++E+ +KE AL HSE++A +GLIST P IR+VKNLR+C DCHS IKLI+ + KRKI
Sbjct: 559 NLEEEDKENALHYHSEKMATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKI 618
Query: 467 IVRDRNRFHHFENGTCSCGDYW 488
VRDR RFHHF++G+CSC DYW
Sbjct: 619 TVRDRKRFHHFQDGSCSCMDYW 640
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 145/338 (42%), Gaps = 58/338 (17%)
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMAR--ALDLFREMQRDN-VRPNEV 117
+ H ++ A ++F+++ ++ W +I G + E A+ LF EM D + PN
Sbjct: 63 LHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRF 122
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC------------- 164
T VL AC++ G ++ G+ IH K+ + V L+ MY C
Sbjct: 123 TFPSVLKACAKTGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKN 182
Query: 165 --------------------------------GDIDKALQVFEEMKERDVTTYNSLIAGL 192
GD A +F++M++R V ++N++I+G
Sbjct: 183 IIEREMVMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGY 242
Query: 193 AMHGRSIEAVEMFREMIN-QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEP 251
+ +G +AVE+FREM + IRP VT V VL A S G ++LG E D GI
Sbjct: 243 SQNGFFKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELG-EWLHLYAEDSGIRI 301
Query: 252 QIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQI---- 307
++D+ S+ G E+A + + I ++++ IHG Q G+ I
Sbjct: 302 DDVLGSALIDMYSKCGIIEKAIMVFERLP-RENVITWSAMINGFAIHG--QAGDAIDCFC 358
Query: 308 AKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
R R +D Y+ L A + +G +E + ++M
Sbjct: 359 KMRQAGVRPSDVA-YINLLTACSHAGLVEEGRRYFSQM 395
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 213/470 (45%), Positives = 307/470 (65%), Gaps = 10/470 (2%)
Query: 25 VELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV---EHGLVENAFEVFSRVKVKDT 81
++++ KCGE + A LFD M E DVV+ T +I+ Y EHG+ + F+ R KD
Sbjct: 385 IDMFVKCGEVEIARGLFDNM-EKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPR---KDI 440
Query: 82 VCWTAMIDGLVRNGEMARALDLFREMQ--RDNVRPNEVTIVCVLSACSQLGALELGRWIH 139
W +I G ++G AL +FRE+Q + RP++VT++ LSAC+QLGA+++G WIH
Sbjct: 441 PAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIH 500
Query: 140 SYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSI 199
Y+ K RI LN + +LI+MYS+ GD++KA++VF + +DV ++++IAGLAMHGR
Sbjct: 501 GYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGE 560
Query: 200 EAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI 259
A+E+F +M ++P VTF +L ACSH GLVD G +F M R YG+ P+ +HY C+
Sbjct: 561 AAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCM 620
Query: 260 VDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADS 319
VD+L R G EEA FI M +AP + G+LL AC IHG L+L E+ RLL+ +
Sbjct: 621 VDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNH 680
Query: 320 GTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQRE 379
G YVLLSN YA +G W+ ++R +M+++G++KE GCSSIE++ +HEFI+GD HP
Sbjct: 681 GAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSR 740
Query: 380 QIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE-KEWALAIHSERLAICYGLISTKPYTT 438
IY K+ E+ ++ GY +T +L +E+ E KE AL +HSE++AI +GLI
Sbjct: 741 DIYAKLDEIMARLRSHGYVANTLCMLQFVEEEEMKEKALKLHSEKMAIAFGLIRADSQQA 800
Query: 439 IRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
IR+VKNLRVC DCH++ K+++ + R I++RDR RFHHF G CSC DYW
Sbjct: 801 IRIVKNLRVCRDCHTVAKMVSKVYGRDIVLRDRYRFHHFSGGHCSCQDYW 850
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 166/338 (49%), Gaps = 44/338 (13%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVK--VKDTVCWTAMIDGLVRNGEMARALDLFR 105
+DV +I+ Y G ++ A+ VF ++ KD V W +M+ G V+ G +ALDLF
Sbjct: 273 DDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFE 332
Query: 106 EMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG 165
M+ + V PN VT+V V+SAC++ L LGR + Y+ ++ + +N V A I+M+ +CG
Sbjct: 333 RMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCG 392
Query: 166 DIDKALQVFEEMKERDVTT-------------------------------YNSLIAGLAM 194
+++ A +F+ M++RDV + +N LI+G
Sbjct: 393 EVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQ 452
Query: 195 HGRSIEAVEMFRE--MINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQ 252
GR EA+ +FRE + G RP +VT + L+AC+ G +D+G E + I+
Sbjct: 453 SGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIG-EWIHGYIKKERIQLN 511
Query: 253 IEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
++D+ S+ G E+A + ++ D + ++++ +HG+ GE + L
Sbjct: 512 RNLATSLIDMYSKSGDVEKAIEVFHSIG-NKDVFVWSAMIAGLAMHGR---GEAAIELFL 567
Query: 313 DCRSA----DSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
D + +S T+ L A + SG E ++ +M+
Sbjct: 568 DMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEME 605
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 152/325 (46%), Gaps = 17/325 (5%)
Query: 27 LYGKCGEFKDAMQLFDEMPECN---DVVASTVMINC--YVEHGLVENAFEVFSRVKVKDT 81
L+ +C FK Q+ +M N D A++ + + ++ A +VF ++ +
Sbjct: 145 LFQQCTSFKQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNL 204
Query: 82 VCWTAMIDGLVRNGEMARALDLFREMQRDN-VRPNEVTIVCVLSACSQLGALELGRWIHS 140
W +I L + + +++ +F M D+ PN+ T ++ A ++ +G+ +H
Sbjct: 205 YSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHG 264
Query: 141 YMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE--EMKERDVTTYNSLIAGLAMHGRS 198
K + V +LI+ Y+ CG +D A VFE E +D+ ++NS++ G G
Sbjct: 265 MAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYP 324
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGC 258
+A+++F M N+G+ P VT V V++AC+ + LG ++ + R+ + +
Sbjct: 325 DKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNE-MMMNLNVCNA 383
Query: 259 IVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQ-IAKRLLDCRS- 316
+D+ + G E A NM+ D + ++ I G ++ E IA+ + D
Sbjct: 384 TIDMFVKCGEVEIARGLFDNME-KRDVVSWTTI-----IDGYAKMSEHGIARDIFDSMPR 437
Query: 317 ADSGTYVLLSNAYASSGKWKEAVQI 341
D + +L + Y SG+ KEA+ I
Sbjct: 438 KDIPAWNVLISGYEQSGRPKEALAI 462
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/481 (44%), Positives = 315/481 (65%), Gaps = 31/481 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G++IH V K G SN R L+++Y K G A LFDEM
Sbjct: 111 GQKIHAMVTKQGFESNLFVRNSLIDMYFKAGYLLLARHLFDEM----------------- 153
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR-DNVRPNEVTIV 120
V+ ++ VCW AMI G +N + + A+++FR MQ+ V PN+VT+V
Sbjct: 154 -------------FVRDRNVVCWNAMIAGYAQNEKYSDAIEVFRMMQQFGGVVPNDVTLV 200
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL AC+ LGAL+LG+WI ++ + + L +G AL +MY++CG I +A +VF +M+ER
Sbjct: 201 SVLPACAHLGALDLGKWIDGFISRREMALGLFLGNALADMYAKCGCITEARRVFNKMEER 260
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV +++ +I GLAM+G + EA F EM++ G +P V F+G+L AC+H GLV G F
Sbjct: 261 DVISWSIIICGLAMYGHADEAFGCFYEMLDCGEKPNDVVFMGLLTACTHAGLVKKGLNCF 320
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+M ++YG+ P++EHYGC+VDLLSR G ++A D I++M + P+ I+ G+LL C+I+
Sbjct: 321 NTMDKEYGVSPKVEHYGCVVDLLSRAGELDKAEDMISSMPMKPNVIIWGALLGGCRIYRD 380
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
G+++ + +L+ S SG+YV L+N Y+S G+ +A + R +M+E GV K PGCS IE
Sbjct: 381 SGRGQRVVQHILELDSDHSGSYVYLANVYSSMGRLDDAAKCRLRMRENGVLKTPGCSWIE 440
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
V+N +HEF +GD+ HP+ +IY ++EL +KL GY P T++V+H I++ EKE AL+IH
Sbjct: 441 VDNTVHEFFMGDLSHPESNKIYSMIRELMWKMKLAGYKPKTDLVVHSIDEEEKEDALSIH 500
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI +GLIST TTIRVVKNLR+CNDCH K+I+ I KR+IIVRDR+RFHHF++G
Sbjct: 501 SEKLAIAFGLISTSEGTTIRVVKNLRICNDCHDAAKIISGIVKREIIVRDRSRFHHFKDG 560
Query: 481 T 481
Sbjct: 561 A 561
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 100/187 (53%), Gaps = 7/187 (3%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLF-REMQRDNV-R 113
+I +H V A +F+ + + A + L +N A+ F ++ N
Sbjct: 30 LIGACADHANVRQAALIFAHLASPNIFAHNATLKALAQNSHWFHAIQFFNHQVSSPNAPN 89
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
P+E T VL AC+ L + G+ IH+ + K + N V +LI+MY + G + A +
Sbjct: 90 PDEFTFTSVLKACAGLAHVVNGQKIHAMVTKQGFESNLFVRNSLIDMYFKAGYLLLARHL 149
Query: 174 FEEM--KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ--GIRPTKVTFVGVLNACSH 229
F+EM ++R+V +N++IAG A + + +A+E+FR M+ Q G+ P VT V VL AC+H
Sbjct: 150 FDEMFVRDRNVVCWNAMIAGYAQNEKYSDAIEVFR-MMQQFGGVVPNDVTLVSVLPACAH 208
Query: 230 GGLVDLG 236
G +DLG
Sbjct: 209 LGALDLG 215
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/483 (44%), Positives = 311/483 (64%), Gaps = 3/483 (0%)
Query: 9 VLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPE---CNDVVASTVMINCYVEHGL 65
+L++GLR + T ++++ + G+ + M E +V +T +++ Y + G
Sbjct: 194 LLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGS 253
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
+E A VF + KD VCW+A+I G NG ALD+F EMQR+NVRP+ +V V SA
Sbjct: 254 MEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSA 313
Query: 126 CSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTY 185
CS+LGALELG W M N ++G ALI+ Y++CG + +A +VF+ M+ +D +
Sbjct: 314 CSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVF 373
Query: 186 NSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR 245
N++I+GLAM G A +F +M+ G++P TFVG+L C+H GLVD G F M+
Sbjct: 374 NAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSS 433
Query: 246 DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGE 305
+ + P IEHYGC+VDL +R G EA D I +M + + I+ G+LL C++H QL E
Sbjct: 434 VFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAE 493
Query: 306 QIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEI 365
+ K+L++ +SG YVLLSN Y++S +W EA +IR+ + + G+QK PGCS +EV+ +
Sbjct: 494 HVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVV 553
Query: 366 HEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLA 425
HEF++GD HP +IY+K++ L + ++ GY+P+TE VL D+E+ EKE+ L HSE+LA
Sbjct: 554 HEFLVGDTSHPLSHKIYEKLESLFKDLREAGYNPTTEFVLFDVEEEEKEYFLGCHSEKLA 613
Query: 426 ICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCG 485
+ + LIST IRVVKNLRVC DCH IKL++ +T R+IIVRD NRFHHF G+CSC
Sbjct: 614 VAFALISTGAKDVIRVVKNLRVCGDCHEAIKLVSKVTGREIIVRDNNRFHHFTEGSCSCR 673
Query: 486 DYW 488
DYW
Sbjct: 674 DYW 676
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 189/392 (48%), Gaps = 29/392 (7%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV T ++ Y ++G + +A +VF + K+ V WTA+I G + +G AL LFR +
Sbjct: 136 DVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLL 195
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+RP+ T+V +L ACS++G L GRWI YM + N V +L++MY++CG ++
Sbjct: 196 EMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSME 255
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+A +VF+ M E+DV +++LI G A +G EA+++F EM + +RP VGV +ACS
Sbjct: 256 EARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACS 315
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
G ++LG M D + + ++D ++ G +A + M+ D ++
Sbjct: 316 RLGALELGNWARGLMDGDEFLSNPVLGTA-LIDFYAKCGSVAQAKEVFKGMR-RKDCVVF 373
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDC-RSADSGTYV----------LLSNAYASSGKWKE 337
+++S + G + + +++ D T+V L+ + +
Sbjct: 374 NAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSS 433
Query: 338 AVQIRAKMKEAG----VQKEPG----------CSSIEVNNEIHEFILGDIRHPQREQIYK 383
+ ++ G +Q G +E N+ + +LG R + Q+ +
Sbjct: 434 VFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAE 493
Query: 384 KMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
+ LKQ+++LE ++ V+L +I W
Sbjct: 494 HV--LKQLIELEPWNSGHYVLLSNIYSASHRW 523
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 147/334 (44%), Gaps = 43/334 (12%)
Query: 54 TVMINCYVEHGL----VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
T +IN + L + A VF++ + + +I G+V N A+ ++ M++
Sbjct: 35 TYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQ 94
Query: 110 DNVRPNEVTIVCVLSACSQLG-ALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
P+ T VL AC++L +G +HS + K D + V L+ +YS+ G +
Sbjct: 95 HGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLT 154
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +VF+E+ E++V ++ ++I G G EA+ +FR ++ G+RP T V +L ACS
Sbjct: 155 DARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACS 214
Query: 229 HGG--------------------------LVDLGFEIFQSMTR-----DYGIEPQIEHYG 257
G LVD+ + SM D +E + +
Sbjct: 215 RVGDLASGRWIDGYMRESGSVGNVFVATSLVDM-YAKCGSMEEARRVFDGMVEKDVVCWS 273
Query: 258 CIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC 314
++ + G P+EA D M+ + PD + + SAC G L+LG A+ L+D
Sbjct: 274 ALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNW-ARGLMDG 332
Query: 315 RSADSGTYV--LLSNAYASSGKWKEAVQIRAKMK 346
S + L + YA G +A ++ M+
Sbjct: 333 DEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMR 366
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/458 (46%), Positives = 307/458 (67%), Gaps = 2/458 (0%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
++ Y G+ +A +LFDEMPE N +V+ M++ +V+ G VE AF +FS + +D V
Sbjct: 103 IINGYAIVGKIDEAKRLFDEMPERN-LVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVS 161
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W +M+ + G+ AL LF +M+ V+P E T+V +LSAC+ LGAL+ G +H+Y+
Sbjct: 162 WNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYIN 221
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
+RI++N IVG AL++MY++CG I A QVF M+ +DV +N++IAG+A+HG EA +
Sbjct: 222 DNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQ 281
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
+F+EM + P +TFV +L+ACSH G+VD G ++ M+ YGIEP++EHY C++DLL
Sbjct: 282 LFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLL 341
Query: 264 SRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV 323
+R G EEA + I M + P+ LG+LL C+IHG +LGE + KRL++ + SG Y+
Sbjct: 342 ARAGLLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYI 401
Query: 324 LLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYK 383
LLSN YA++ KW +A ++R MK G+ K PG S IE+ +H F+ GD HP+ +IY
Sbjct: 402 LLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYD 461
Query: 384 KMQELKQIVKLE-GYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVV 442
K+ E+ +K GYS T VL D+E+ +KE ALA+HSE+LAI YGL+ IR+V
Sbjct: 462 KLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIV 521
Query: 443 KNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
KNLRVC DCH + KLI+ + R+IIVRDRNRFHHFE+G
Sbjct: 522 KNLRVCRDCHHVTKLISKVYGREIIVRDRNRFHHFEDG 559
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 129/307 (42%), Gaps = 55/307 (17%)
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
+T V+ AC++ G +H+++ K + + + +LI++Y+ D+ A Q+F
Sbjct: 1 MTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSL 60
Query: 177 MKERDVTTYNSL-------------------------------IAGLAMHGRSIEAVEMF 205
+RDV ++N++ I G A+ G+ EA +F
Sbjct: 61 CSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDVISWNTIINGYAIVGKIDEAKRLF 120
Query: 206 REMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT-RDYGIEPQIEHYGCIVDLLS 264
EM + + V++ +L+ G V+ F +F M RD + + ++ +
Sbjct: 121 DEMPERNL----VSWNSMLSGFVKCGNVEEAFGLFSEMPCRD------VVSWNSMLACYA 170
Query: 265 RVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSG 320
+ G+P EA M+ + P + SLLSAC G L G + + D R +S
Sbjct: 171 QCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSI 230
Query: 321 TYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQ 380
L + YA GK A Q+ M+ V ++I IH G ++ Q Q
Sbjct: 231 VGTALVDMYAKCGKISLATQVFNAMESKDVL---AWNTIIAGMAIH----GHVKEAQ--Q 281
Query: 381 IYKKMQE 387
++K+M+E
Sbjct: 282 LFKEMKE 288
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 36/213 (16%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G +H + + N LV++Y KCG+ A Q+F+ M E DV+A +I
Sbjct: 212 KGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAM-ESKDVLAWNTIIAGM 270
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG V+ A + LF+EM+ +V PN++T V
Sbjct: 271 AIHGHVKEAQQ-------------------------------LFKEMKEASVEPNDITFV 299
Query: 121 CVLSACSQLGALELGRWIHSYM-GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
+LSACS G ++ G+ + M + I+ +I++ +R G +++A+++ M
Sbjct: 300 AMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPM 359
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMF-REMIN 210
E + + +L+ G +HG + E EM + +IN
Sbjct: 360 EPNPSALGALLGGCRIHG-NFELGEMVGKRLIN 391
>gi|449513257|ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 558
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 210/442 (47%), Positives = 300/442 (67%), Gaps = 1/442 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D+ +I Y G +E A +VF + +D+V W+ +I + NG + ALDLF +M
Sbjct: 117 SDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKM 176
Query: 108 Q-RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
Q D V P+EVT++ V+SA S LG LELGRW+ +++G+ ++ +G ALI+M+SRCG
Sbjct: 177 QLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGFGVSVALGTALIDMFSRCGS 236
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
ID+++ VFE+M R+V T+ +LI GL +HGRS+EA+ MF M G++P VTF GVL A
Sbjct: 237 IDESIVVFEKMAVRNVLTWTALINGLGIHGRSMEALAMFHSMRKSGVQPDYVTFSGVLVA 296
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
CSHGGLV G++IF+S+ + YG++P ++HYGC+VD+L R G EAYDF+ M + P+ I
Sbjct: 297 CSHGGLVKEGWDIFESIRKVYGMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSI 356
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
+ +LL AC H L L E++ ++ S+ +G VLLSN Y ++G+W E IR+KM+
Sbjct: 357 IWRTLLGACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKASIRSKMR 416
Query: 347 EAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH 406
E + KEPGCSSI V+ IHEF+ GD HPQ E I K + + ++ GY T+ VLH
Sbjct: 417 EKRIGKEPGCSSINVDQTIHEFVSGDNSHPQSEDITKFLSSIIGDLRNRGYMMQTKNVLH 476
Query: 407 DIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKI 466
DIE+ E+E +L+ HSE+LA+ + ++S K TIR++KNLR+C DCHS +K I+ +RKI
Sbjct: 477 DIEEEEREHSLSYHSEKLAVAFAILSMKDKRTIRIMKNLRICYDCHSFMKHISVRFERKI 536
Query: 467 IVRDRNRFHHFENGTCSCGDYW 488
I+RDRNRFHHFE G CSC DYW
Sbjct: 537 IIRDRNRFHHFEKGLCSCHDYW 558
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 123/230 (53%), Gaps = 7/230 (3%)
Query: 72 VFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGA 131
VFSR+ DT+ + +I R + +L F M+ + + + T VL ACS+L
Sbjct: 44 VFSRIPSPDTIAYNTIIRSHSRFFP-SHSLSYFFSMRSNGIPLDNFTFPFVLKACSRL-- 100
Query: 132 LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAG 191
++ +HS + K+ + + V ALI +Y CG ++ A++VF+EM ERD +++++IA
Sbjct: 101 -QINLHLHSLIVKYGLGSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIAS 159
Query: 192 LAMHGRSIEAVEMFREM-INQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIE 250
+G + EA+++F +M + + P +VT + V++A SH G ++LG + + R G
Sbjct: 160 FLNNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGR-LGFG 218
Query: 251 PQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ ++D+ SR G +E+ M + + + +L++ IHG+
Sbjct: 219 VSVALGTALIDMFSRCGSIDESIVVFEKMAVR-NVLTWTALINGLGIHGR 267
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/487 (43%), Positives = 314/487 (64%), Gaps = 1/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +HG ++K G + L+ +Y + ++F+ + + D+V T M++
Sbjct: 129 GPAVHGALIKHGFEYDPHVESGLIFMYAEMSCLSSCHRVFESVQK-PDLVCQTTMVSACA 187
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G + A +F + +D V W AMI G + G+ AL+LF+ MQ D V+ NEV+++
Sbjct: 188 KCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGVKVNEVSMIS 247
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V++AC+ LGAL+ G+W H+Y+ K++I + +G AL++MY +CG++D+AL+VF EM E++
Sbjct: 248 VVTACTHLGALDQGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKVFWEMNEKN 307
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V T+++ I GLAM+G + +E+F M ++GI P ++TF+ VL CS G VD G F
Sbjct: 308 VYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVDEGRSHFD 367
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM RD+GIEP++EHYGC+VDL R GR EEA +FI M + P G+LL+AC+++ +
Sbjct: 368 SMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKNM 427
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LGE +++L++ + G YV LSN YA +G W +R MK G+ K PGCS +EV
Sbjct: 428 ELGEFASRKLIEVEGKNHGAYVSLSNIYADTGNWDRVSNVRQSMKAEGISKLPGCSVMEV 487
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N E+HEF GD HP + I E+ + +KL GY ST VL DIE+ EKE AL HS
Sbjct: 488 NGEVHEFFSGDKSHPSYDVIETMWGEISKRLKLAGYVASTNSVLFDIEEEEKEDALCKHS 547
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E++AI +GL S K IR+VKNLR+C DCH + K+I+ I +R+IIVRDRNRFHHF++G
Sbjct: 548 EKMAIAFGLFSLKEGLPIRIVKNLRICWDCHDVSKMISKIFEREIIVRDRNRFHHFKDGE 607
Query: 482 CSCGDYW 488
CSC D+W
Sbjct: 608 CSCKDFW 614
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 33/178 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ H + K ++ + LV++Y KCG A+++F EM E
Sbjct: 260 QGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKVFWEMNE-------------- 305
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
K+ W+ I GL NG + L+LF M+ + + PNE+T +
Sbjct: 306 ------------------KNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFI 347
Query: 121 CVLSACSQLGALELGRWIHSYMGK-HRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
VL CS +G ++ GR M + H I+ G ++++Y R G +++AL M
Sbjct: 348 SVLKGCSVVGFVDEGRSHFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTM 405
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 201/488 (41%), Positives = 317/488 (64%), Gaps = 1/488 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR+IH ++ K+G S+RS + + +Y KCG +A Q+F +M E +VVA ++ Y
Sbjct: 404 QGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKM-ENKNVVAWASLLTMY 462
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++ G + +A +VFS + ++ V W MI G ++G++A+ +L M+ + +P+ VTI+
Sbjct: 463 IKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTII 522
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L AC L ALE G+ +H+ K ++ + +V +LI MYS+CG++ +A VF+++ R
Sbjct: 523 SILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNR 582
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D +N+++AG HG EAV++F+ M+ + + P ++TF V++AC GLV G EIF
Sbjct: 583 DTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIF 642
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ M D+ ++P +HYGC+VDLL R GR +EA +FI M PD + +LL ACK H
Sbjct: 643 RIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDN 702
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+QL E A +L +++ YV LSN YA +G+W ++ ++R M + G++K+ G SSIE
Sbjct: 703 VQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIE 762
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
++ IH F+ D HP+ + I+ +++ L + +K GY+P VLHD+++ +KE AL H
Sbjct: 763 IDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEAGYTPDMRFVLHDVDEVQKERALCHH 822
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI YGL+ T P T IR++KNLRVC DCH+ K I+ I KR+I+ RD NRFH+F+NG
Sbjct: 823 SEKLAIAYGLLKTPPGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFKNG 882
Query: 481 TCSCGDYW 488
TCSCGD+W
Sbjct: 883 TCSCGDFW 890
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 184/393 (46%), Gaps = 44/393 (11%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQL---FDEMPECNDVVASTVMI 57
E ++ G + + GL N +T ++E K F+D + DE+ D+ +I
Sbjct: 61 EAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLI 120
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
N Y + G V + +VF R+ ++D V W++MI N A+A D F M+ N+ PN +
Sbjct: 121 NFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRI 180
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T + +L AC+ LE R IH+ + ++ + V ALI MYS+CG+I A ++F++M
Sbjct: 181 TFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKM 240
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
KER+V ++ ++I A H + EA E++ +M+ GI P VTFV +LN+C+ ++ G
Sbjct: 241 KERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGR 300
Query: 238 EIFQSMTRDYGIEPQ-------IEHY---GCIVDLLSRVGRP------------------ 269
I S + G+E I Y CI D R
Sbjct: 301 RI-HSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQS 359
Query: 270 --------EEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SA 317
+E + + M+ + P+ + S+L AC +HG L+ G QI + +
Sbjct: 360 GYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFES 419
Query: 318 DSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
D + N YA G EA Q+ +KM+ V
Sbjct: 420 DRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNV 452
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 179/398 (44%), Gaps = 49/398 (12%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPEC---NDVVASTVMI 57
E E++ ++L+ G+ N T + L+ ++ + E DVV + +I
Sbjct: 263 EAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALI 322
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNG-----EMARALDLFREMQRDNV 112
Y + +++A E F R+ +D + W+AMI G ++G + L M+R+ V
Sbjct: 323 TMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGV 382
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYS---------- 162
PN+VT + +L ACS GALE GR IH+ + K + + + A+ NMY+
Sbjct: 383 FPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQ 442
Query: 163 ---------------------RCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEA 201
+CGD+ A +VF EM R+V ++N +IAG A G +
Sbjct: 443 VFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKV 502
Query: 202 VEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVD 261
E+ M +G +P +VT + +L AC ++ G ++ + G+E ++
Sbjct: 503 FELLSSMKVEGFQPDRVTIISILEACGALSALERG-KLVHAEAVKLGLESDTVVATSLIG 561
Query: 262 LLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SA 317
+ S+ G EA +D I+N D + ++L+ HG + KR+L R
Sbjct: 562 MYSKCGEVTEARTVFDKISNR----DTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPP 617
Query: 318 DSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
+ T+ + +A +G +E +I M+E + +PG
Sbjct: 618 NEITFTAVISACGRAGLVQEGREIFRIMQE-DFRMKPG 654
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 133/264 (50%), Gaps = 3/264 (1%)
Query: 91 LVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLN 150
L + G + A+ L +++ + N T C++ C++L E G+ +H + + + ++
Sbjct: 53 LCKAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAID 112
Query: 151 HIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
+G +LIN YS+ GD+ QVF M RDV T++S+IA A + +A + F M +
Sbjct: 113 IYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKD 172
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
I P ++TF+ +L AC++ +++ EI ++ + G+E + ++ + S+ G
Sbjct: 173 ANIEPNRITFLSILKACNNYSMLEKAREI-HTVVKASGMETDVAVATALITMYSKCGEIS 231
Query: 271 EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNAY 329
A + MK + + +++ A H KL ++ +++L S ++ T+V L N+
Sbjct: 232 LACEIFQKMK-ERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSC 290
Query: 330 ASSGKWKEAVQIRAKMKEAGVQKE 353
+ +I + + E G++ +
Sbjct: 291 NTPEALNRGRRIHSHISERGLETD 314
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/489 (44%), Positives = 313/489 (64%), Gaps = 3/489 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +IH V+K GL ++ L+++YGKC + +F+EM E DV A ++
Sbjct: 229 GIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEV-DVGACNALVTGLS 287
Query: 62 EHGLVENAFEVFSRVKVKD--TVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
+GLV+NA EVF + K D V WT+MI +NG+ AL+LFREMQ + V+PN VTI
Sbjct: 288 RNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTI 347
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
C+L AC + AL G+ H + ++ I + VG ALI+MY++CG + + F+ M
Sbjct: 348 PCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPN 407
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
R++ ++NSL+AG AMHG++ EA+ +F M G +P V+F VL+AC+ GGL + G+
Sbjct: 408 RNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFY 467
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F SM+R++G+E ++EHY C+V LL R GR EEAY I M PD + G+LLS+C++H
Sbjct: 468 FDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHN 527
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
++ LGE AKR+ + + G Y+LLSN YAS W E +R M+ G++K PG S I
Sbjct: 528 RVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWI 587
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E+ N++H + GD HPQ QI +K+ +L +K GY P T+ VL D+E+ +KE L
Sbjct: 588 EIKNKVHMLLAGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQDVEEQDKEQILCG 647
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LA+ GL++TKP ++V+KNLR+C DCH++IK I++ KR+I VRD NRFH F+
Sbjct: 648 HSEKLAVVLGLLNTKPGFPLQVIKNLRICRDCHAVIKFISDFEKREIFVRDTNRFHQFKG 707
Query: 480 GTCSCGDYW 488
G CSCGDYW
Sbjct: 708 GVCSCGDYW 716
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 158/339 (46%), Gaps = 46/339 (13%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H L GL + L+ +Y + KDA +FD++P+ VV S+ +I+ +
Sbjct: 93 GKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQ-PGVVTSSALISRFA 151
Query: 62 EHGLVENAFEVFSRVK----VKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
G V+ E+F + + + V W MI G R+G A+ +F+ M + ++P+
Sbjct: 152 RKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGT 211
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC------------- 164
++ VL A L +G IH Y+ K + + V ALI+MY +C
Sbjct: 212 SVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEM 271
Query: 165 ------------------GDIDKALQVFEEMKERD--VTTYNSLIAGLAMHGRSIEAVEM 204
G +D AL+VF++ K D V ++ S+IA + +G+ +EA+E+
Sbjct: 272 DEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALEL 331
Query: 205 FREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLS 264
FREM +G++P VT +L AC + + G + + GI + ++D+ +
Sbjct: 332 FREMQIEGVKPNSVTIPCLLPACGNIAALLHG-KAAHCFSLRNGIFNDVYVGSALIDMYA 390
Query: 265 RVGR---PEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ GR +D + N + + SL++ +HGK
Sbjct: 391 KCGRMLASRLCFDMMPNRNL----VSWNSLMAGYAMHGK 425
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 114/247 (46%), Gaps = 7/247 (2%)
Query: 103 LFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYS 162
+F M + P+ + V+ C+ L AL+ G+ +H + + L+ +V +L++MY
Sbjct: 61 VFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYV 120
Query: 163 RCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVG 222
+ + A VF+++ + V T ++LI+ A GR E E+F + + G+ V++ G
Sbjct: 121 QFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNG 180
Query: 223 VLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE---EAYDFITNM 279
+++ + G +FQ+M + G++P ++ + + P + + ++
Sbjct: 181 MISGFNRSGSYLDAVLMFQNMHLE-GLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQ 239
Query: 280 KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAV 339
+ PD ++ +L+ ++GK +++ + D G L + +G A+
Sbjct: 240 GLGPDKFVVSALID---MYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNAL 296
Query: 340 QIRAKMK 346
++ + K
Sbjct: 297 EVFKQFK 303
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/487 (43%), Positives = 310/487 (63%), Gaps = 1/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ IH + G R + LV +Y CG A +++D++P +V ST M++ Y
Sbjct: 236 GKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPS-KHMVVSTAMLSGYA 294
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G+V++A +F R+ KD VCW+AMI G + + AL LF EMQR + P+++T++
Sbjct: 295 KLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLS 354
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V+SAC+ +GAL +WIH+Y K+ + ALI+MY++CG++ KA +VFE M ++
Sbjct: 355 VISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKN 414
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +++S+I AMHG + A+ +F M Q I P VTF+GVL ACSH GLV+ G + F
Sbjct: 415 VISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFS 474
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM ++ I PQ EHYGC+VDL R +A + I M P+ I+ GSL+SAC+ HG++
Sbjct: 475 SMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEI 534
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LGE A RLL+ G V+LSN YA +W + +R MK GV KE CS IEV
Sbjct: 535 ELGEFAATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRIEV 594
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
NNE+H F++ D H Q ++IYKK+ + +KL GY+PST +L D+E+ EK+ + HS
Sbjct: 595 NNEVHVFMMADRYHKQSDEIYKKLDAVVSQLKLVGYTPSTSGILVDLEEEEKKEVVLWHS 654
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+CYGLI + + IR+VKNLR+C DCHS +KL++ + + +I++RDR RFHHF G
Sbjct: 655 EKLALCYGLIGERKESCIRIVKNLRICEDCHSFMKLVSKVHRIEIVMRDRTRFHHFNGGI 714
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 715 CSCRDYW 721
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 141/331 (42%), Gaps = 68/331 (20%)
Query: 2 GREIHGQVLKLGL-RSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
G EIHG K G ++ + L+ +Y CG DA LFD+M DVV +MI
Sbjct: 134 GLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSH-RDVVTWNIMI--- 189
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
DG +N L L+ EM+ P+ + +
Sbjct: 190 ----------------------------DGYSQNAHYDHVLKLYEEMKTSGTEPDAIILC 221
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV------- 173
VLSAC+ G L G+ IH ++ + + + +L+NMY+ CG + A +V
Sbjct: 222 TVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSK 281
Query: 174 ------------------------FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
F+ M E+D+ ++++I+G A + +EA+++F EM
Sbjct: 282 HMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQ 341
Query: 210 NQGIRPTKVTFVGVLNACSH-GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGR 268
+ I P ++T + V++AC++ G LV + + G + ++D+ ++ G
Sbjct: 342 RRRIVPDQITMLSVISACANVGALVQAKW--IHTYADKNGFGRTLPINNALIDMYAKCGN 399
Query: 269 PEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+A + NM + I S+++A +HG
Sbjct: 400 LVKAREVFENMP-RKNVISWSSMINAFAMHG 429
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 128/286 (44%), Gaps = 14/286 (4%)
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
++ A +FS + T ++ R L L+ ++R+ + + +L A
Sbjct: 65 LDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKA 124
Query: 126 CSQLGALELGRWIHSYMGKH-RIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
S+L AL LG IH K + + ALI MY+ CG I A +F++M RDV T
Sbjct: 125 VSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVT 184
Query: 185 YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT 244
+N +I G + + ++++ EM G P + VL+AC+H G + G I Q
Sbjct: 185 WNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQ-FI 243
Query: 245 RDYGIEPQIEHYGCIVDLLSRVGR---PEEAYDFITNMKIAPDHIMLGS-LLSACKIHGK 300
+D G +V++ + G E YD ++ H+++ + +LS G
Sbjct: 244 KDNGFRVGSHIQTSLVNMYANCGAMHLAREVYD-----QLPSKHMVVSTAMLSGYAKLGM 298
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
+Q I R+++ D + + + YA S + EA+Q+ +M+
Sbjct: 299 VQDARFIFDRMVE---KDLVCWSAMISGYAESYQPLEALQLFNEMQ 341
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 34/198 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+ + IH K G L+++Y KCG A ++F+ MP N V++ + MIN +
Sbjct: 367 QAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKN-VISWSSMINAF 425
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG ++A +F R M+ N+ PN VT +
Sbjct: 426 AMHGDADSAIALFHR-------------------------------MKEQNIEPNGVTFI 454
Query: 121 CVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
VL ACS G +E G ++ S + +HRI G ++++Y R + KA+++ E M
Sbjct: 455 GVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPF 514
Query: 179 ERDVTTYNSLIAGLAMHG 196
+V + SL++ HG
Sbjct: 515 PPNVIIWGSLMSACQNHG 532
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 209/487 (42%), Positives = 322/487 (66%), Gaps = 1/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ IH +++ + + + LV +Y CG A+ LF++M N +VAST M+ Y
Sbjct: 242 GKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKN-LVASTAMVTGYS 300
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G +ENA VF+++ KD VCW+AMI G + AL+LF EMQ ++P++VT++
Sbjct: 301 KLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLS 360
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V++AC+ LGAL+ +WIH ++ K+ + ALI MY++CG +++A ++F++M ++
Sbjct: 361 VITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKN 420
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ +I+ AMHG + A+ F +M ++ I P +TFVGVL ACSH GLV+ G +IF
Sbjct: 421 VISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFY 480
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM ++ I P+ HYGC+VDL R EA + + M +AP+ I+ GSL++AC++HG++
Sbjct: 481 SMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEI 540
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LGE AKRLL+ G +V LSN YA + +W++ Q+R MK G+ KE GCS E+
Sbjct: 541 ELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFEL 600
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
NNEIHEF++ D H ++IY+K+ E+ +KL GYSP+T +L D+E+ EK+ + HS
Sbjct: 601 NNEIHEFLVADRSHKHADEIYEKLYEVVSKLKLVGYSPNTCSILVDLEEEEKKEVVLWHS 660
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+CYGL+ + IR++KNLRVC DCH+ IKL + + +R+I+VRDR RFHH+++G
Sbjct: 661 EKLALCYGLMRDGTGSCIRIIKNLRVCEDCHTFIKLASKVYEREIVVRDRTRFHHYKDGV 720
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 721 CSCKDYW 727
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 151/330 (45%), Gaps = 65/330 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG EIHG KLG S+ + LV +Y CG +A +FD+M DVV ++MI+ Y
Sbjct: 140 EGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFH-RDVVTWSIMIDGY 198
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ GL + AL LF EM+ NV P+E+ +
Sbjct: 199 CQSGLFND-------------------------------ALLLFEEMKNYNVEPDEMMLS 227
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-- 178
VLSAC + G L G+ IH ++ ++ I ++ + AL+ MY+ CG +D AL +FE+M
Sbjct: 228 TVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPK 287
Query: 179 -----------------------------ERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
++D+ ++++I+G A EA+ +F EM
Sbjct: 288 NLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQ 347
Query: 210 NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRP 269
+ GI+P +VT + V+ AC+H G +D I + ++ G + ++++ ++ G
Sbjct: 348 SLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKN-GFGGALPINNALIEMYAKCGSL 406
Query: 270 EEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
E A M + I ++SA +HG
Sbjct: 407 ERARRIFDKMP-RKNVISWTCMISAFAMHG 435
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 148/327 (45%), Gaps = 26/327 (7%)
Query: 37 AMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGE 96
A L ++ ++ V+ +C + L + A VF+ + +T + L R+ E
Sbjct: 44 AQILRSKLDRSTSLLVKLVISSCALSSSL-DYALSVFNLIPKPETHLCNRFLRELSRSEE 102
Query: 97 MARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGA 156
+ L ++ M+ + + + +L A S++ +L G IH K D + V
Sbjct: 103 PEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTG 162
Query: 157 LINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPT 216
L+ MY+ CG I +A +F++M RDV T++ +I G G +A+ +F EM N + P
Sbjct: 163 LVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPD 222
Query: 217 KVTFVGVLNACSHGGLVDLGFEIFQS-MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDF 275
++ VL+AC G + G I M + ++P ++ +V + + G + A +
Sbjct: 223 EMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQ--SALVTMYASCGSMDLALNL 280
Query: 276 ITNMKIAPDHIMLGSLLSACKIHGKLQLGE---------QIAKRLLDCRSADSGTYVLLS 326
K+ P ++ + S + G +LG+ Q+ K+ L C SA +
Sbjct: 281 FE--KMTPKNL----VASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSA-------MI 327
Query: 327 NAYASSGKWKEAVQIRAKMKEAGVQKE 353
+ YA S +EA+ + +M+ G++ +
Sbjct: 328 SGYAESDSPQEALNLFNEMQSLGIKPD 354
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/491 (43%), Positives = 319/491 (64%), Gaps = 4/491 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG ++ +KLGL +N L+ +Y DA ++FD P D+ + +M++ Y
Sbjct: 120 EGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPN-RDMYSWNIMLSGY 178
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G ++ A ++F + KD V WT MI G ++ G ALD+F M + PNE T+
Sbjct: 179 ARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKGMSPNEYTLA 238
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-- 178
L+AC+ L AL+ GRW+H Y+ K+ I +N + LI+MY++CG+++ A ++F
Sbjct: 239 SSLAACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFNSNPRL 298
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
+R V +N++I G A+HG+S EA+E+F +M + + P KVTFV +LNACSHG V+ G
Sbjct: 299 KRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNACSHGNRVEEGRY 358
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
F+SM Y ++P++EHYGC+VDLL R GR +EA + I++M + PD + G+LLSACKIH
Sbjct: 359 YFESMASHYRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGALLSACKIH 418
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
++GE++ K + + G +VLL+N Y+ +G W EA +R K+ E+G +K PGCSS
Sbjct: 419 KDAEMGERVGKIVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIAESGKKKTPGCSS 478
Query: 359 IEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE-KEWAL 417
IE+N H+F++GD HPQ +Q+Y + E+ +K+ GY P + VL DI+D E +E AL
Sbjct: 479 IELNGMFHQFLVGDRSHPQTKQLYLFLDEMITKLKIAGYIPESGEVLLDIDDNEDRETAL 538
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LAI +GL++T P T IR+VKNLRVC+DCH IK I+ + R+IIVRDR R+HHF
Sbjct: 539 LKHSEKLAIAFGLMNTTPKTPIRIVKNLRVCSDCHLAIKFISKVYDREIIVRDRIRYHHF 598
Query: 478 ENGTCSCGDYW 488
++GTCSC DYW
Sbjct: 599 KDGTCSCNDYW 609
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 135/313 (43%), Gaps = 46/313 (14%)
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLV-RNGEMARALDLFREMQRDN-VRPNEVTIVCVL 123
+ A VF D + +I L A + FR + R+ + PN+ +
Sbjct: 50 ISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAF 109
Query: 124 SAC-SQLGALELGRWIHSYMGKHRIDLNHIVGGALINM---------------------- 160
C S +G LE G + + K ++ N V ALI M
Sbjct: 110 KGCGSGVGVLE-GEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDM 168
Query: 161 ---------YSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ 211
Y+R G +D+A Q+F+EM E+DV ++ ++I+G G +EA+++F M+ +
Sbjct: 169 YSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAK 228
Query: 212 GIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEE 271
G+ P + T L AC++ +D G + + ++ I+ ++D+ ++ G E
Sbjct: 229 GMSPNEYTLASSLAACANLVALDQGRWMHVYIKKN-NIQMNERLLAGLIDMYAKCGELEF 287
Query: 272 AYDFITN-----MKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL-LDCRSADSGTYVLL 325
A + K+ P + M+G +HGK + ++ +++ ++ S + T+V L
Sbjct: 288 ASKLFNSNPRLKRKVWPWNAMIGGF----AVHGKSKEAIEVFEQMKIEKVSPNKVTFVAL 343
Query: 326 SNAYASSGKWKEA 338
NA + + +E
Sbjct: 344 LNACSHGNRVEEG 356
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/479 (44%), Positives = 312/479 (65%), Gaps = 1/479 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ IH LK+G S + + L+ +Y KCG+ A +LFDE D+++ MI+ Y+
Sbjct: 395 GKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDE-AYLLDLISWNSMISGYL 453
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ LV+NA +F + KD V W++MI G +N L LF+EMQ +P+E T+V
Sbjct: 454 KCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVS 513
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V+SAC++L ALE G+W+H+Y+ ++ + +N I+G LI+MY +CG ++ AL+VF M E+
Sbjct: 514 VISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKG 573
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
++T+N+LI GLAM+G +++MF M + P ++TF+GVL AC H GLVD G F
Sbjct: 574 ISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFY 633
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM D+ I+P ++HYGC+VDLL R G+ +EA + + M + PD G+LL ACK HG
Sbjct: 634 SMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDS 693
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++G ++ ++L++ + G +VLLSN YAS GKW + ++IR M + V K PGCS IE
Sbjct: 694 EMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEA 753
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N IHEF+ GD HP + I + E+ +KLEGY+P VL D+++ EKE L HS
Sbjct: 754 NGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKESTLFRHS 813
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
E+LAI +GLI+ P T IR++KNLR+CNDCH+ KLI+ RKI+VRDR+RFHHFE G
Sbjct: 814 EKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVVRDRHRFHHFEQG 872
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 111/248 (44%), Gaps = 37/248 (14%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ +H + + GL N L+++Y KC
Sbjct: 526 QGKWVHAYIKRNGLTINVILGTTLIDMYMKC----------------------------- 556
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G VE A EVF + K W A+I GL NG + +LD+F M++ +V PNE+T +
Sbjct: 557 ---GCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFM 613
Query: 121 CVLSACSQLGALELGR-WIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
VL AC +G ++ G+ +S + H+I N G ++++ R G + +A ++ M
Sbjct: 614 GVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPM 673
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTF-VGVLNACSHGGLVDLGF 237
DV T+ +L+ HG S + R++I ++P F V + N + G D
Sbjct: 674 TPDVATWGALLGACKKHGDSEMGRRVGRKLIE--LQPDHDGFHVLLSNIYASKGKWDDVL 731
Query: 238 EIFQSMTR 245
EI MT+
Sbjct: 732 EIRGMMTK 739
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 99/234 (42%), Gaps = 19/234 (8%)
Query: 100 ALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALIN 159
A L++ M + + + T ++ ACS + + +H+++ K D + V LIN
Sbjct: 197 AFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLIN 256
Query: 160 MYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVT 219
+S C ++ A +VF E D ++NS++AG G EA ++ +M + I +
Sbjct: 257 CFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSM 316
Query: 220 FVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM 279
V GLV ++F M +E + + ++ + EEA M
Sbjct: 317 IV----LFGMRGLVVEACKLFDEM-----LEKDMVTWSALIACFQQNEMYEEAIRTFVGM 367
Query: 280 K---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT--YVLLSNA 328
+ D ++ S LSAC + +G +L+ S GT Y+ L NA
Sbjct: 368 HKIGVMVDEVVAVSALSACANLLVVNMG-----KLIHSLSLKIGTESYINLQNA 416
>gi|79456853|ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75116883|sp|Q683I9.1|PP295_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62890
gi|51968398|dbj|BAD42891.1| putative protein [Arabidopsis thaliana]
gi|332646886|gb|AEE80407.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 573
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 208/494 (42%), Positives = 324/494 (65%), Gaps = 8/494 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ H Q+L GL + R L+ +Y CG+ + A ++FD+ D+ A ++N Y
Sbjct: 81 GQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDD-SGSKDLPAWNSVVNAYA 139
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN-----VRPNE 116
+ GL+++A ++F + ++ + W+ +I+G V G+ ALDLFREMQ VRPNE
Sbjct: 140 KAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNE 199
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
T+ VLSAC +LGALE G+W+H+Y+ K+ ++++ ++G ALI+MY++CG +++A +VF
Sbjct: 200 FTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNA 259
Query: 177 M-KERDVTTYNSLIAGLAMHGRSIEAVEMFREMI-NQGIRPTKVTFVGVLNACSHGGLVD 234
+ ++DV Y+++I LAM+G + E ++F EM + I P VTFVG+L AC H GL++
Sbjct: 260 LGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLIN 319
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
G F+ M ++GI P I+HYGC+VDL R G +EA FI +M + PD ++ GSLLS
Sbjct: 320 EGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Query: 295 CKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
++ G ++ E KRL++ +SG YVLLSN YA +G+W E IR +M+ G+ K P
Sbjct: 380 SRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVP 439
Query: 355 GCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKE 414
GCS +EV +HEF++GD + E+IY + E+ Q ++ GY T+ VL D+ + +KE
Sbjct: 440 GCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKE 499
Query: 415 WALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRF 474
AL+ HSE+LAI + L+ T+P T +R++KNLR+C DCH ++K+I+ + R+I+VRD NRF
Sbjct: 500 IALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRF 559
Query: 475 HHFENGTCSCGDYW 488
HHF +G+CSC D+W
Sbjct: 560 HHFRDGSCSCRDFW 573
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 134/342 (39%), Gaps = 76/342 (22%)
Query: 80 DTVCWTAMIDGLVRN---GEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGR 136
++ W +I +V N + + ++ M+ V P+ T +L + L LG+
Sbjct: 23 ESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQ 82
Query: 137 WIHSYMGKHRIDLNHIVGGALINMYSRCGD------------------------------ 166
H+ + +D + V +L+NMYS CGD
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 167 -IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM----INQG-IRPTKVTF 220
ID A ++F+EM ER+V +++ LI G M G+ EA+++FREM N+ +RP + T
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 221 VGVLNACSHGGLVDLG-------------------------------FEIFQSMTRDYGI 249
VL+AC G ++ G E + + G
Sbjct: 203 STVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGS 262
Query: 250 EPQIEHYGCIVDLLSRVGRPEEAYDFITNM----KIAPDHIMLGSLLSACKIHGKLQLGE 305
+ ++ Y ++ L+ G +E + + M I P+ + +L AC G + G+
Sbjct: 263 KKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGK 322
Query: 306 QIAKRLLDCRSADSGT--YVLLSNAYASSGKWKEAVQIRAKM 345
K +++ Y + + Y SG KEA A M
Sbjct: 323 SYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASM 364
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 36/200 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ +H + K + + L+++Y KCG + A ++F+ + DV A + MI C
Sbjct: 217 QGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCL 276
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+GL + F++FS + DN+ PN VT V
Sbjct: 277 AMYGLTDECFQLFSEMTTS------------------------------DNINPNSVTFV 306
Query: 121 CVLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+L AC G + G+ M + + H G ++++Y R G I +A M
Sbjct: 307 GILGACVHRGLINEGKSYFKMMIEEFGITPSIQHY--GCMVDLYGRSGLIKEAESFIASM 364
Query: 178 K-ERDVTTYNSLIAGLAMHG 196
E DV + SL++G M G
Sbjct: 365 PMEPDVLIWGSLLSGSRMLG 384
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/488 (43%), Positives = 312/488 (63%), Gaps = 33/488 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H +LGL N S ++++Y KC +
Sbjct: 30 GKLLHSYSKELGLDENLSVNNAILDMYCKCDD---------------------------- 61
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+E+A EVF+R++ KD + WT+M+ GL ++G +L LFR+MQ + P+E+T+V
Sbjct: 62 ----IESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVG 117
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLSAC+Q GAL+ G++IH + K I+ + ++ AL++MY++CG ID ALQVF M+ R+
Sbjct: 118 VLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRN 177
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V T+N++I GLAMHG +A+ +F +M + P VTF+ +L ACSH GLVD G +FQ
Sbjct: 178 VFTWNAMIGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQ 237
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+M + IEP++EHYGC+VDLL R + ++A FI NM I + ++ +LL AC+ G
Sbjct: 238 AMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHF 297
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
L E+I +R+++ G YV+LSN YA +W A+++R +MK G++K PGCS IE+
Sbjct: 298 DLAEKIXRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIEL 357
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLE-GYSPSTEVVLHDIEDWEKEWALAIH 420
N IH+F+ GD H Q EQIY ++E+ + V L+ G+ P T VL DIE+ EKE +L +H
Sbjct: 358 NGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLH 417
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI GLIST + IR+VKNLRVCNDCHS +K+ + + R+I+ RDR+RFHHF+ G
Sbjct: 418 SEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEG 477
Query: 481 TCSCGDYW 488
+CSC D+W
Sbjct: 478 SCSCMDFW 485
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 108/282 (38%), Gaps = 71/282 (25%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ IH + K + + LV++Y KCG A+Q
Sbjct: 130 QGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQ--------------------- 168
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
VF R++V++ W AMI GL +G A+ LF +M+ D + P++VT +
Sbjct: 169 -----------VFRRMRVRNVFTWNAMIGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFI 217
Query: 121 CVLSACSQLGALELGRWIHSYM-GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+L ACS G ++ G + M K +I+ G ++++ R +D AL E M
Sbjct: 218 ALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMP- 276
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
I+ V + +L AC GG DL +I
Sbjct: 277 ---------------------------------IKANSVLWATLLGACRSGGHFDLAEKI 303
Query: 240 FQSMTRDYGIEP-QIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
+ R +EP Y + +L + V + + A MK
Sbjct: 304 XR---RVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMK 342
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 199/488 (40%), Positives = 314/488 (64%), Gaps = 1/488 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR+IH ++ K+G +RS + + +Y KCG +A Q+F +M N VVA T ++ Y
Sbjct: 382 QGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKN-VVAWTSFLSMY 440
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++ G + +A +VFS + ++ V W MI G +NG++ + +L M+ + +P+ VT++
Sbjct: 441 IKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVI 500
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L AC L LE G+ +H+ K ++ + +V +LI MYS+CG + +A VF++M R
Sbjct: 501 TILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNR 560
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D +N+++AG HG +EAV++F+ M+ + + P ++T V++ACS GLV G EIF
Sbjct: 561 DTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIF 620
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ M D+ + P+ +HYGC+VDLL R GR +EA +FI +M PD + +LL ACK H
Sbjct: 621 RMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNN 680
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+QL E+ A +L+ + + Y+ LSN YA +G+W ++ ++R M + G++K+ G SSIE
Sbjct: 681 VQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIE 740
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
++ IH F+ D HP+ + I+ +++ L + +K GY+P VLHD++D +KE AL H
Sbjct: 741 IDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPDMRFVLHDVDDVQKEKALCHH 800
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI YGL+ T T IR++KNLRVC DCH+ K I+ I KR+I+ RD NRFH+F NG
Sbjct: 801 SEKLAIAYGLLKTPSGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFNNG 860
Query: 481 TCSCGDYW 488
TCSCGD+W
Sbjct: 861 TCSCGDFW 868
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 177/393 (45%), Gaps = 44/393 (11%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMI 57
E ++ G + + GL N +T ++E K F+D + ++ E D+ +I
Sbjct: 39 EAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLI 98
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
N Y + V +A +VF R+ ++D V W++MI N A+A D F M N+ PN +
Sbjct: 99 NFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRI 158
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T + +L AC+ LE GR IH+ + ++ + V ALI MYS+CG+I A +VF +M
Sbjct: 159 TFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKM 218
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
ER+V ++ ++I A H + EA E++ +M+ GI P VTFV +LN+C+ ++ G
Sbjct: 219 TERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGR 278
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK----------------- 280
I S + G+E + ++ + + +EA + M
Sbjct: 279 RI-HSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQS 337
Query: 281 ----------------------IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SA 317
+ P+ + S+L AC HG L+ G QI L
Sbjct: 338 GYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFEL 397
Query: 318 DSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
D + N YA G EA Q+ +KM V
Sbjct: 398 DRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNV 430
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 169/383 (44%), Gaps = 72/383 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPEC---NDVVASTVMI 57
E E++ Q+L+ G+ N T + L+ ++ + E D++ + +I
Sbjct: 241 EAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALI 300
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNG-----EMARALDLFREMQRDNV 112
Y + V+ A E+F R+ +D + W+AMI G ++G + L M+R+ V
Sbjct: 301 TMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGV 360
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYS---------- 162
PN+VT + +L AC+ GALE GR IH+ + K +L+ + A+ NMY+
Sbjct: 361 FPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQ 420
Query: 163 ---------------------RCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEA 201
+CGD+ A +VF EM R+V ++N +IAG A +G ++
Sbjct: 421 VFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKV 480
Query: 202 VEMFREMINQGIRPTKVTFVGVLNACS-----------HGGLVDLGFE----IFQSMTRD 246
E+ M +G +P +VT + +L AC H V LG E + S+
Sbjct: 481 FELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGM 540
Query: 247 YGIEPQIEHYGCIVDLLS---------------RVGRPEEAYDFITNM---KIAPDHIML 288
Y Q+ + D +S + G EA D M +++P+ I L
Sbjct: 541 YSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITL 600
Query: 289 GSLLSACKIHGKLQLGEQIAKRL 311
+++SAC G +Q G +I + +
Sbjct: 601 TAVISACSRAGLVQEGREIFRMM 623
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 133/264 (50%), Gaps = 3/264 (1%)
Query: 91 LVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLN 150
L + G + A+ L +++ + N T CV+ C++ E G+ +H + + ++++
Sbjct: 31 LCKAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEID 90
Query: 151 HIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
+G +LIN YS+ D+ A QVF M RDV T++S+IA A + +A + F M +
Sbjct: 91 IYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTD 150
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
I P ++TF+ +L AC++ +++ G +I ++ + G+E + ++ + S+ G
Sbjct: 151 ANIEPNRITFLSILKACNNYSILEKGRKI-HTIVKAMGMETDVAVATALITMYSKCGEIS 209
Query: 271 EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNAY 329
A + M + + +++ A H KL ++ +++L S ++ T+V L N+
Sbjct: 210 VACEVFHKM-TERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSC 268
Query: 330 ASSGKWKEAVQIRAKMKEAGVQKE 353
+ +I + + E G++ +
Sbjct: 269 NTPEALNRGRRIHSHISERGLETD 292
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/484 (44%), Positives = 318/484 (65%), Gaps = 1/484 (0%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
+HG V+K G + + LV +Y + G +FD E D+V T M+N + G
Sbjct: 134 VHGAVIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVE-PDLVTQTAMLNACAKCG 192
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
++ A ++F + +D V W AMI G + G ALD+F MQ + V+ NEV++V VLS
Sbjct: 193 DIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVLS 252
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
AC+ L L+ GRW+H+Y+ ++++ + +G AL++MY++CG++D+A+QVF MKER+V T
Sbjct: 253 ACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNVYT 312
Query: 185 YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT 244
++S I GLAM+G E++++F +M +G++P +TF+ VL CS GLV+ G + F SM
Sbjct: 313 WSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGLVEEGRKHFDSMR 372
Query: 245 RDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLG 304
YGI PQ+EHYG +VD+ R GR +EA +FI +M + P +LL AC+++ +LG
Sbjct: 373 NVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSALLHACRMYKNKELG 432
Query: 305 EQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNE 364
E +++++ + G YVLLSN YA W+ +R MK GV+K PGCS IEV+ E
Sbjct: 433 EIAQRKIVELEDKNDGAYVLLSNIYADYKNWESVSSLRQTMKAKGVKKLPGCSVIEVDGE 492
Query: 365 IHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERL 424
+HEFI+GD HP+ ++I K++E+ + ++L GY +T VL DIE+ EKE AL+ HSE++
Sbjct: 493 VHEFIVGDKSHPRYDEIEMKLEEISKCLRLSGYVANTNPVLFDIEEEEKEDALSKHSEKV 552
Query: 425 AICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSC 484
AI +GLIS K IRVV NLR+C DCH++ K+I+ I R+IIVRDRNRFHHF++G CSC
Sbjct: 553 AIAFGLISLKGVVPIRVVMNLRICWDCHNVAKMISKIFNREIIVRDRNRFHHFKDGECSC 612
Query: 485 GDYW 488
DYW
Sbjct: 613 KDYW 616
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 167/403 (41%), Gaps = 89/403 (22%)
Query: 85 TAMIDGLVRNGEMARALDLFREM---QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSY 141
+MI ++ +++ + + +N+ P+ T ++ C+QL A G +H
Sbjct: 78 NSMIRAYSKSSTPSKSFHFYANILHSNNNNLSPDNYTFTFLVRTCAQLQAHVTGLCVHGA 137
Query: 142 MGKHRIDLNHIVGGALINMY-------------------------------SRCGDIDKA 170
+ KH +L+ V L+ MY ++CGDID A
Sbjct: 138 VIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLNACAKCGDIDFA 197
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
++F+EM ERD T+N++IAG A GRS EA+++F M +G++ +V+ V VL+AC+H
Sbjct: 198 RKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVLSACTHL 257
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGR---------------------- 268
++D G + + R Y + + +VD+ ++ G
Sbjct: 258 QVLDHGRWVHAYVER-YKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNVYTWSSA 316
Query: 269 ---------PEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRS 316
EE+ D +MK + P+ I S+L C + G ++ G + + +
Sbjct: 317 IGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGLVEEGRKHFDSMRNVYG 376
Query: 317 ADSGT--YVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIR 374
Y L+ + Y +G+ KEA+ M ++ G S +
Sbjct: 377 IGPQLEHYGLMVDMYGRAGRLKEALNFINSMP---MRPHVGAWSA-------------LL 420
Query: 375 HPQREQIYKKMQELKQ--IVKLEGYSPSTEVVLHDIEDWEKEW 415
H R K++ E+ Q IV+LE + V+L +I K W
Sbjct: 421 HACRMYKNKELGEIAQRKIVELEDKNDGAYVLLSNIYADYKNW 463
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/491 (43%), Positives = 318/491 (64%), Gaps = 5/491 (1%)
Query: 2 GREIHGQVLKLG-LRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
G+++H Q + +G S+ +++LY KCG A ++FDEM E DVV+ T +I Y
Sbjct: 161 GKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSE-RDVVSWTELIVAY 219
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++G +E+A +F + +KD V WTAM+ G +NG AL+ F++MQ + +EVT+
Sbjct: 220 AKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLA 279
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDL--NHIVGGALINMYSRCGDIDKALQVFEEMK 178
V+SAC+QLGA++ WI + N +VG ALI+MYS+CG D+A +VFE MK
Sbjct: 280 GVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMK 339
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
ER+V +Y+S+I G AMHGR+ A+++F +M+ IRP KVTF+G+L+ACSH GLV+ G +
Sbjct: 340 ERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQ 399
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
+F M + +G+ P +HY C+VDLL R G EEA D + M + P+ + G+LL AC+IH
Sbjct: 400 LFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIH 459
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
G + + A L G Y+LLSN YAS+G+W+E ++R ++E G +K PGCS
Sbjct: 460 GNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSW 519
Query: 359 IE-VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
E N EIH+F GD HP+ +I + +++L + ++ GY P+ +D+ D EKE L
Sbjct: 520 FEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERIL 579
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LA+ YGL+ T+ TI+++KN+R+C DCH+++ + IT R+IIVRD RFHHF
Sbjct: 580 MSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHF 639
Query: 478 ENGTCSCGDYW 488
NGTCSCG++W
Sbjct: 640 HNGTCSCGNFW 650
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 157/348 (45%), Gaps = 40/348 (11%)
Query: 44 MPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDL 103
+ +C+ V+ + + V+ + VF +V + WTAMI G G ++ + +
Sbjct: 70 LSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSESTNF 129
Query: 104 FREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHS---YMGKHRIDLNHIVGGALINM 160
+ M+RD V P T + AC ++LG+ +H+ +G DL VG ++I++
Sbjct: 130 YTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDL--YVGNSMIDL 187
Query: 161 YSRCGDIDKALQVFEEMKERDVTTYNSLI------------------------------- 189
Y +CG + A +VF+EM ERDV ++ LI
Sbjct: 188 YVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMV 247
Query: 190 AGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRD-YG 248
G A +GR EA+E F++M + G+ +VT GV++AC+ G V I R +G
Sbjct: 248 TGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFG 307
Query: 249 IEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIA 308
+ ++D+ S+ G P+EAY MK + S++ +HG+ Q+
Sbjct: 308 PSGNVVVGSALIDMYSKCGSPDEAYKVFEVMK-ERNVFSYSSMILGYAMHGRAHSALQLF 366
Query: 309 KRLLDCR-SADSGTYVLLSNAYASSGKWKEAVQIRAKM-KEAGVQKEP 354
+L + T++ + +A + +G ++ Q+ AKM K GV P
Sbjct: 367 HDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSP 414
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/493 (42%), Positives = 320/493 (64%), Gaps = 5/493 (1%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQL---FDEMPECNDVVASTVMI 57
E E+ +++K +R + ST + +V + G + Q+ D+ +++ ++
Sbjct: 249 EALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLM 308
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y + G +E A +F + KD + W +I G AL LF+EM R RPN+V
Sbjct: 309 DLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDV 368
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHI--VGGALINMYSRCGDIDKALQVFE 175
T++ +L AC+ LGA+++GRWIH Y+ K + + +LI+MY++CGDI+ A QVF
Sbjct: 369 TMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFN 428
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
+ + ++++N++I G AMHGR+ A ++F M GI P +TFVG+L+ACS G++DL
Sbjct: 429 SILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDL 488
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G IF++MT+DY I P++EHYGC++DLL G +EA + I NM++ PD ++ SLL AC
Sbjct: 489 GRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKAC 548
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
KI G ++LGE A+ L+ + G YVLLSN YA++G+W E +IRA + + G++K PG
Sbjct: 549 KIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPG 608
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
CSSIE+++ +HEFI+GD HP+ +IY ++E++ +++ G+ P T VL ++E+ KE
Sbjct: 609 CSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEG 668
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
AL HSE+LAI +GLISTKP T + +VKNLRVC +CH KLI+ I KR+II RDR RFH
Sbjct: 669 ALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFH 728
Query: 476 HFENGTCSCGDYW 488
HF +G CSC DYW
Sbjct: 729 HFRDGVCSCNDYW 741
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 165/408 (40%), Gaps = 100/408 (24%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
R IH Q++K GL + KL+EL F D +P
Sbjct: 50 RLIHAQMIKTGLHNTNYALSKLLELCVISPHF-------DGLPY---------------- 86
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
A VF ++ + + W M G + + AL L+ M + PN T +
Sbjct: 87 ------AISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFL 140
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L +C++ A + G+ IH ++ K DL+ V +LI++Y + G ++ A +VF+ RDV
Sbjct: 141 LKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDV 200
Query: 183 TTY-------------------------------NSLIAGLAMHGRSIEAVEMFREMINQ 211
+Y N++I+G A G EA+E+F+EM+
Sbjct: 201 VSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKT 260
Query: 212 GIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEE 271
IRP + T V V++AC+ G ++LG ++ S D+G ++ ++DL S+ G E
Sbjct: 261 NIRPDESTMVTVVSACAQSGSIELGRQV-HSWIDDHGFGSNLKIVNSLMDLYSKCGELET 319
Query: 272 AYDFI------------------TNMKIA----------------PDHIMLGSLLSACKI 297
A T+M + P+ + + S+L AC
Sbjct: 320 ACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAH 379
Query: 298 HGKLQLGE----QIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQI 341
G + +G I KRL +A S L+ + YA G + A Q+
Sbjct: 380 LGAIDIGRWIHVYIDKRLKSATNASSLRTSLI-DMYAKCGDIEAAHQV 426
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/493 (42%), Positives = 318/493 (64%), Gaps = 5/493 (1%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPE---CNDVVASTVMI 57
E E+ +++K +R + ST + ++ + G + Q+ + + +++ +I
Sbjct: 178 EALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALI 237
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y + G +E A +F + KD + W +I G AL LF+EM R PN+V
Sbjct: 238 DFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDV 297
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHI--VGGALINMYSRCGDIDKALQVFE 175
T++ +L AC+ LGA+++GRWIH Y+ K + + + +LI+MYS+CGDI+ A QVF
Sbjct: 298 TMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFN 357
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
M + + +N++I G AMHGR+ A ++F M I+P +TFVG+L+ACSH G++DL
Sbjct: 358 SMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDL 417
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G IF+SMT +Y I P++EHYGC++DLL G +EA + I+ M + PD ++ SLL AC
Sbjct: 418 GRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKAC 477
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
K+HG ++LGE+ A+ L + G+YVLLSN YA++G+W E +IR + + G++K PG
Sbjct: 478 KMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPG 537
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
CSSIE+++ +HEFI+GD HP+ +IY ++E++ +++ G+ P T VL ++E+ KE
Sbjct: 538 CSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEMEEEFKEG 597
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
AL HSE+LAI +GLISTKP T + +VKNLRVC +CH KLI+ I KR+II RDR RFH
Sbjct: 598 ALRHHSEKLAIAFGLISTKPETKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFH 657
Query: 476 HFENGTCSCGDYW 488
HF +G CSC DYW
Sbjct: 658 HFRDGVCSCNDYW 670
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 110/235 (46%), Gaps = 32/235 (13%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A VF ++ + + W M G + + AL L+ M + PN T +L +C++
Sbjct: 16 AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
L A + G IH ++ K +L+ V +LI+MY + ++ A +VF+ RDV +Y +L
Sbjct: 76 LKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTAL 135
Query: 189 IAGLAMHG-----RSI--------------------------EAVEMFREMINQGIRPTK 217
+ G A G R++ EA+E+F+EM+ +RP +
Sbjct: 136 VTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDE 195
Query: 218 VTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
T V V++A + G ++LG ++ S D+G ++ ++D S+ G E A
Sbjct: 196 STMVTVISASARSGSIELGRQV-HSWIADHGFGSNLKIVNALIDFYSKCGEMETA 249
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/489 (44%), Positives = 315/489 (64%), Gaps = 41/489 (8%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG ++H ++K GL + + +Y G +A ++ D+
Sbjct: 176 EGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDD----------------- 218
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
EV D VC M D R G AL++F +MQ++ +RP + +
Sbjct: 219 -------KGGEV-------DAVC---MPD---RKGCFMEALEIFHQMQKEKIRPRKFVLP 258
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSAC+ LGAL+ GRWIH+Y ++ I L+ ++G +L++MY++CG ID A +VFE+M +
Sbjct: 259 SVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNK 318
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+V+++N++I GLAMHGR+ +A+++F +M I P ++TFVGVLNAC+HGGLV G IF
Sbjct: 319 EVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQKGLTIF 375
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM ++YG+EPQIEHYGCIVDLL R G EA ++++ P + G+LL AC+ HG
Sbjct: 376 NSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGN 435
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++LGE++ K LL+ +SG Y LLSN YA +G+W+E ++R MKE G++ PG S I+
Sbjct: 436 VELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIID 495
Query: 361 VN-NEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
+ E+H+FI+GD HPQ + IY+ + ++K+ +++EGY P VL DI++ EKE A+
Sbjct: 496 LGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQ 555
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GLI+T P TTIR+VKNLRVC DCHS KLI+ + R+IIVRDR R+HHF N
Sbjct: 556 HSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRN 615
Query: 480 GTCSCGDYW 488
G CSC D+W
Sbjct: 616 GACSCKDFW 624
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 123/279 (44%), Gaps = 51/279 (18%)
Query: 67 ENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSAC 126
E++ VF V+ + W MI + N E +A+ L+ EM + RPN+ T VL AC
Sbjct: 109 ESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKAC 168
Query: 127 SQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYN 186
S G + G +H+++ KH + + + + I MY+ G + +A ++ ++
Sbjct: 169 SDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDK--------G 220
Query: 187 SLIAGLAMHGRS---IEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL----------- 232
+ + M R +EA+E+F +M + IRP K VL+AC++ G
Sbjct: 221 GEVDAVCMPDRKGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYA 280
Query: 233 ------------------------VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGR 268
+DL +E+F+ M+ ++ + ++ L+ GR
Sbjct: 281 KRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNK-----EVSSWNAMIGGLAMHGR 335
Query: 269 PEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQI 307
E+A D + M I P+ I +L+AC G +Q G I
Sbjct: 336 AEDAIDLFSKMDINPNEITFVGVLNACAHGGLVQKGLTI 374
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/489 (44%), Positives = 308/489 (62%), Gaps = 34/489 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H + GL SN L++LY KCGE
Sbjct: 254 GRQVHSWIDDHGLGSNLKIVNALIDLYSKCGE---------------------------- 285
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
VE A +F + KD + W MI G AL LF+EM R PN+VT++
Sbjct: 286 ----VETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLS 341
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHI--VGGALINMYSRCGDIDKALQVFEEMKE 179
+L AC+QLGA++ GRWIH Y+ K + + + +LI+MY++CGDI+ A QVF M
Sbjct: 342 ILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHH 401
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
R ++ N++I G AMHGR+ A ++F M GI P +TFVG+L+ACSH G++DLG I
Sbjct: 402 RTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRI 461
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F+SMT++Y I P++EHYGC++DLL +G +EA + I M + PD ++ SLL ACK+HG
Sbjct: 462 FRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHG 521
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
++LGE A++L+ + G+YVLLSN YA++G+W E IRA + + G++K PGCSSI
Sbjct: 522 NVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSI 581
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E+++ +HEFI+GD HP+ +IY ++E++ +++ G+ P T VL ++E+ K+ AL
Sbjct: 582 EIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEFKQGALRH 641
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GLISTKP T + +VKNLRVC +CH KLI+ I KR+II RDR RFHHF +
Sbjct: 642 HSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRD 701
Query: 480 GTCSCGDYW 488
G CSC DYW
Sbjct: 702 GVCSCNDYW 710
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 182/346 (52%), Gaps = 36/346 (10%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG++IHG VLKLG + L+ +Y K G +KDA ++FD DVV+ T +I Y
Sbjct: 121 EGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSH-RDVVSYTALITGY 179
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G +E+A ++F + VKD V W A+I G G ALDLF+EM + NV+P+E T+V
Sbjct: 180 ASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMV 239
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+SAC+Q G+++LGR +HS++ H + N + ALI++YS+CG+++ A +F+ + +
Sbjct: 240 TVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNK 299
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++N++I G EA+ +F+EM+ G P VT + +L AC+ G +D G I
Sbjct: 300 DVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIH 359
Query: 241 QSM-TRDYGIEPQIEHYGCIVDLLSRV-------------------------------GR 268
+ R G+ ++D+ ++ GR
Sbjct: 360 VYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGR 419
Query: 269 PEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
A+D + M+ I PD I LLSAC G L LG +I + +
Sbjct: 420 ANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSM 465
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 64/321 (19%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
R IH Q++K GL + +L+E F FD +P
Sbjct: 19 RIIHAQMIKTGLHNTNYALSRLLE-------FCILSPNFDGLPY---------------- 55
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
A VF ++ + + W M G + + A+ L+ M + PN T +
Sbjct: 56 ------AISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFL 109
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L +C++L + G+ IH ++ K +L+ V +LI+MY + G A +VF+ RDV
Sbjct: 110 LKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDV 169
Query: 183 TTYNSLIAGLAMH-------------------------------GRSIEAVEMFREMINQ 211
+Y +LI G A G + EA+++F+EM+
Sbjct: 170 VSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKT 229
Query: 212 GIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEE 271
++P + T V V++AC+ G + LG ++ S D+G+ ++ ++DL S+ G E
Sbjct: 230 NVKPDESTMVTVVSACAQSGSIQLGRQV-HSWIDDHGLGSNLKIVNALIDLYSKCGEVET 288
Query: 272 A---YDFITNMKIAPDHIMLG 289
A + ++N + + M+G
Sbjct: 289 ACGLFQGLSNKDVISWNTMIG 309
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/497 (42%), Positives = 321/497 (64%), Gaps = 12/497 (2%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
E E+ ++++ +R + T + ++ + G + ++ + + + +S ++N +
Sbjct: 198 EALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAF 257
Query: 61 V----EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
+ + G VE A +F + KD V W +I G AL LF+EM R PN+
Sbjct: 258 IGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPND 317
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGA-----LINMYSRCGDIDKAL 171
VT++ VL AC+ LGA+++GRWIH Y+ K L + G+ LI+MY++CGDI+ A
Sbjct: 318 VTMLSVLPACAHLGAIDIGRWIHVYIDKR---LKGVTNGSALRTSLIDMYAKCGDIEAAH 374
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
QVF M + ++++N++I G AMHGR+ A ++F M GI P +T VG+L+ACSH G
Sbjct: 375 QVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSG 434
Query: 232 LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSL 291
L+DLG IF+S+T+DY I P++EHYGC++DLL G +EA + I M + PD ++ SL
Sbjct: 435 LLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSL 494
Query: 292 LSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
L ACK+HG L+L E A++L++ +SG+YVLLSN YA++G+W++ +IR + G++
Sbjct: 495 LKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMK 554
Query: 352 KEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDW 411
K PGCSSIE+++ +HEFI+GD HPQ +IY+ ++E+ +++ G+ P T VL ++E+
Sbjct: 555 KVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLEEAGFVPDTSEVLQEMEEE 614
Query: 412 EKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDR 471
KE AL HSE+LAI +GLISTKP T + VVKNLRVC +CH KLI+ I KR+I+ RDR
Sbjct: 615 WKEGALRHHSEKLAIAFGLISTKPGTKLTVVKNLRVCRNCHEATKLISKIYKREIVARDR 674
Query: 472 NRFHHFENGTCSCGDYW 488
RFHHF +G CSC DYW
Sbjct: 675 TRFHHFRDGVCSCCDYW 691
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/352 (34%), Positives = 180/352 (51%), Gaps = 47/352 (13%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR+IH QV+KLG +R L+ +Y + G +DA ++FD + DVV+ T +I Y
Sbjct: 101 EGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQ-RDVVSCTALITGY 159
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G V +A +VF + +D V W AMI G V N AL+LF+EM R NVRP+E T+V
Sbjct: 160 ASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLV 219
Query: 121 CVLSACSQLGALELGRWIHSYMGKHR-IDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
VLSAC+Q G++ELGR IH+ + H + + A I +YS+CGD++ A +FE +
Sbjct: 220 SVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSC 279
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG--- 236
+DV ++N+LI G EA+ +F+EM+ G P VT + VL AC+H G +D+G
Sbjct: 280 KDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWI 339
Query: 237 ----------------------------------FEIFQSMTRDYGIEPQIEHYGCIVDL 262
++F SM + + + ++
Sbjct: 340 HVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSM-----MHKSLSSWNAMIFG 394
Query: 263 LSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
+ GR A+D + M+ I PD I L LLSAC G L LG I K +
Sbjct: 395 FAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSV 446
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 144/346 (41%), Gaps = 70/346 (20%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A VF + + + W M+ GL + ++ L+++ M PN T +L +C++
Sbjct: 36 AVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAK 95
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSR---------------------C--- 164
E GR IH+ + K +L+ +LI+MY+R C
Sbjct: 96 SKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTAL 155
Query: 165 -------GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTK 217
GD+ A +VF+ + ERDV ++N++I G + EA+E+F+EM+ +RP +
Sbjct: 156 ITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDE 215
Query: 218 VTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFI- 276
T V VL+AC+ G ++LG EI + +G ++ + L S+ G E A
Sbjct: 216 GTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFE 275
Query: 277 -----------------TNMKI----------------APDHIMLGSLLSACKIHGKLQL 303
T+M + +P+ + + S+L AC G + +
Sbjct: 276 GLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDI 335
Query: 304 GE----QIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
G I KRL + S L + YA G + A Q+ M
Sbjct: 336 GRWIHVYIDKRLKGVTNG-SALRTSLIDMYAKCGDIEAAHQVFNSM 380
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 197/435 (45%), Positives = 295/435 (67%), Gaps = 2/435 (0%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+I+ YV+ G +E A +F +++ K+ V W MI G AL LFR M + N+ PN
Sbjct: 302 LIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPN 361
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG--GALINMYSRCGDIDKALQV 173
+VT + +L AC+ LGAL+LG+W+H+Y+ K+ + + V +LI+MY++CGD+ A ++
Sbjct: 362 DVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRI 421
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV 233
F+ M + + T+N++I+G AMHG + A+ +F M ++G P +TFVGVL AC H GL+
Sbjct: 422 FDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLL 481
Query: 234 DLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLS 293
LG F SM +DY + P++ HYGC++DL R G +EA + NM++ PD + SLL
Sbjct: 482 SLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLG 541
Query: 294 ACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
AC+IH +++L E +AK L + + YVLLSN YA +G+W++ +IR ++ + ++K
Sbjct: 542 ACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKV 601
Query: 354 PGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEK 413
PGCSSIEV++ +HEF++GD HPQ +IYK + E+ ++ G+ P T VL+D+++ K
Sbjct: 602 PGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAGFVPDTSEVLYDMDEEWK 661
Query: 414 EWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNR 473
E L+ HSE+LAI +GLISTKP TTIR++KNLRVC +CHS KLI+ I R+II RDRNR
Sbjct: 662 EGVLSHHSEKLAIAFGLISTKPGTTIRIMKNLRVCGNCHSATKLISKIFNREIIARDRNR 721
Query: 474 FHHFENGTCSCGDYW 488
FHHF++G+CSC DYW
Sbjct: 722 FHHFKDGSCSCKDYW 736
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/453 (27%), Positives = 221/453 (48%), Gaps = 53/453 (11%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+++H VLKLGL N L+ +Y + GE +A +FD+ D V+ T +I Y
Sbjct: 146 EGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDK-SSMRDAVSFTALITGY 204
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G ++ A E+F + V+D V W AMI G ++G + A+ F EM+R V PN T++
Sbjct: 205 ASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTML 264
Query: 121 CVLSACSQLGA-LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
VLSAC+Q G+ L+LG W+ S++ + N + LI+MY +CGD+++A +FE++++
Sbjct: 265 SVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQD 324
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
++V ++N +I G EA+ +FR M+ I P VTF+ +L AC++ G +DLG +
Sbjct: 325 KNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWV 384
Query: 240 FQSMTRDY-GIEPQIEHYGCIVDLLSRVGRPEEA-------------------------- 272
+ ++ ++ + + ++D+ ++ G A
Sbjct: 385 HAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHG 444
Query: 273 --------YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL-DCR-SADSGTY 322
+ +T+ PD I +L+ACK G L LG + ++ D + S Y
Sbjct: 445 HTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHY 504
Query: 323 VLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIY 382
+ + + +G + EA + M+ ++ + I +LG R +R ++
Sbjct: 505 GCMIDLFGRAGLFDEAETLVKNME------------MKPDGAIWCSLLGACRIHRRIELA 552
Query: 383 KKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
+ + K + +LE +PS V+L +I W
Sbjct: 553 ESVA--KHLFELEPENPSAYVLLSNIYAGAGRW 583
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/448 (21%), Positives = 170/448 (37%), Gaps = 133/448 (29%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
++IH Q++K GL + KL+E C V
Sbjct: 45 KQIHSQIIKTGLHNTHFALSKLIEF-------------------------------CAVS 73
Query: 63 -HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG + A +F ++ + V W MI GL + AL+ + M PNE T
Sbjct: 74 PHGDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPS 133
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD--------------- 166
+ +C+++ G+ +H+++ K ++ N V +LINMY++ G+
Sbjct: 134 IFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRD 193
Query: 167 ----------------IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
+D+A ++F+E+ RDV ++N++I+G A GR EA+ F EM
Sbjct: 194 AVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRR 253
Query: 211 QGIRPTKVTFVGVLNACSH-GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRP 269
+ P T + VL+AC+ G + LG + +S D G+ I ++D+ + G
Sbjct: 254 AKVTPNVSTMLSVLSACAQSGSSLQLGNWV-RSWIEDRGLGSNIRLVNGLIDMYVKCGDL 312
Query: 270 EEAYDFITNMK----------------------------------IAPDHIMLGSLLSAC 295
EEA + ++ I P+ + S+L AC
Sbjct: 313 EEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPAC 372
Query: 296 KIHGKLQLGE---------------------------------QIAKRLLDCRSADS-GT 321
G L LG+ +AKR+ DC + S T
Sbjct: 373 ANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLAT 432
Query: 322 YVLLSNAYASSGKWKEAVQIRAKMKEAG 349
+ + + +A G A+ + ++M G
Sbjct: 433 WNAMISGFAMHGHTDTALGLFSRMTSEG 460
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 108/246 (43%), Gaps = 20/246 (8%)
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINM--YSRCGDIDKALQVFEEM 177
+ +LS C L L + IHS + K + H LI S GD+ AL +F+ +
Sbjct: 32 LTLLSNCKTLQTL---KQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTI 88
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
+ + +N +I GL+ A+E + MI+ G P + TF + +C+ G
Sbjct: 89 RNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGK 148
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
++ + + G+E + ++++ ++ G A + + D + +L++
Sbjct: 149 QVHAHVLK-LGLEHNAFVHTSLINMYAQNGELVNA-RLVFDKSSMRDAVSFTALITGYAS 206
Query: 298 HGKL----QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
G L +L ++I R D ++ + + YA SG+ +EA+ +M+ A V
Sbjct: 207 KGFLDEARELFDEIPVR-------DVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVT-- 257
Query: 354 PGCSSI 359
P S++
Sbjct: 258 PNVSTM 263
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/456 (46%), Positives = 313/456 (68%), Gaps = 1/456 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +HG V K+G RSN + +V LY CGE +A LF++MP+ DVV +MI +
Sbjct: 147 GRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQ-RDVVTWNIMIAQLI 205
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G E A+++FSR+ ++ WT+MI G V+ G+ A+ LF +M+ V+ NEVT+V
Sbjct: 206 KQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVA 265
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL+AC+ LGAL+LG IH Y +H N + LI+MY +CG +++A +VFEEM+ER
Sbjct: 266 VLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERT 325
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +++++I GLAMHGR+ EA+ +F +M GI P VTF+G+L+ACSH GL+ G F
Sbjct: 326 VVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFA 385
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SMTRDYGI PQIEHYGC+VDLLSR G EA++FI NM + P+ ++ G+LL AC++H +
Sbjct: 386 SMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNV 445
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++ E+ K LL+ + G YV+LSN YA +G+W++ ++R MK+ V+K PG SSI V
Sbjct: 446 EMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITV 505
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ +HEF+ G+ HP EQI+++ +EL + ++L+GY P+T VVL DIE+ EK ++ HS
Sbjct: 506 DGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHS 565
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKL 457
E+LA+ +GL++T T IR++KNLR+C DCHS ++
Sbjct: 566 EKLALVFGLMNTPAETPIRIMKNLRICEDCHSAFQI 601
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 155/354 (43%), Gaps = 50/354 (14%)
Query: 67 ENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSAC 126
+ FE + K +T W + + L A+ LF +++ +V P+ T VL AC
Sbjct: 80 QQIFECVEKQK-PETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRAC 138
Query: 127 SQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYN 186
L L GR +H + K N + ++++Y+ CG++ +A +FE+M +RDV T+N
Sbjct: 139 LNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWN 198
Query: 187 -------------------------------SLIAGLAMHGRSIEAVEMFREMINQGIRP 215
S+IAG G++ EA+ +F +M G++
Sbjct: 199 IMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKC 258
Query: 216 TKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDF 275
+VT V VL AC+ G +DLG I + R +G + + ++D+ + G EEA
Sbjct: 259 NEVTVVAVLAACADLGALDLGMRIHEYSNR-HGFKRNVRISNTLIDMYVKCGCLEEACKV 317
Query: 276 ITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG-TYVLLSNAYAS 331
M+ + M+G L +HG+ + ++ + +G T++ L +A +
Sbjct: 318 FEEMEERTVVSWSAMIGGL----AMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSH 373
Query: 332 SGKWKEAVQIRAKM-KEAGVQKE---PGC-----SSIEVNNEIHEFILGDIRHP 376
G E + A M ++ G+ + GC S + +E HEFIL P
Sbjct: 374 MGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKP 427
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/491 (43%), Positives = 315/491 (64%), Gaps = 5/491 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +HGQ L++GL + L+++Y KCG DA +LFD+M D+ + +I Y+
Sbjct: 200 GRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMI-VRDMASWNALIAGYM 258
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN--VRPNEVTI 119
+ G + A ++F R++ ++ V WTAMI G +NG +AL LF EM +D ++PN VTI
Sbjct: 259 KEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTI 318
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V VL AC+Q ALE GR IH + + LN V AL MY++C + +A F+ + +
Sbjct: 319 VSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQ 378
Query: 180 --RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
+++ +N++I A HG +EAV +F M+ G++P VTF+G+L+ CSH GL+D G
Sbjct: 379 NGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGL 438
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F M + +EP++EHY C+VDLL R GR EA + I+ M + + G+LL+AC+
Sbjct: 439 NHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRS 498
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
H L++ E A+RL +SG YVLLSN YA +G W+E ++RA +K G++K PGCS
Sbjct: 499 HRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCS 558
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IE+N + H F+ D HPQ ++IYK ++ L + +K+ GY P T VLHDI + EKE+ L
Sbjct: 559 WIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEEKEYNL 618
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LAI +GL++T+P +RV KNLR+C DCH+ K I+ I +R+IIVRD NRFH F
Sbjct: 619 TTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKFISKIYEREIIVRDLNRFHCF 678
Query: 478 ENGTCSCGDYW 488
++G+CSCGDYW
Sbjct: 679 KDGSCSCGDYW 689
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 143/314 (45%), Gaps = 30/314 (9%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARA---LDLFREMQRDNV 112
M+ Y G +++A VF R+ ++ + ++I R+G L+ + M +
Sbjct: 118 MVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGL 177
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
+ T+ VL +C+ L + +GR +H + ++ + VG +LI+MY +CG I A +
Sbjct: 178 LGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARK 237
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
+F++M RD+ ++N+LIAG G A ++F M ++ I V++ +++ + G
Sbjct: 238 LFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNI----VSWTAMISGYTQNGF 293
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL------SRVGRPEEAYDFITNMKI---AP 283
+ +F M +D G E + ++ IV +L + + R +DF + + +
Sbjct: 294 AEQALGLFDEMLQD-GSEMK-PNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSS 351
Query: 284 DHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSN----AYASSGKWKEAV 339
L + + C + R A +G ++ N AYAS G EAV
Sbjct: 352 VQTALAGMYAKCY--------SLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAV 403
Query: 340 QIRAKMKEAGVQKE 353
I M AGVQ +
Sbjct: 404 SIFENMLRAGVQPD 417
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 116/274 (42%), Gaps = 21/274 (7%)
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
P+ + + ++ ++LG+ H+ + H + N + ++ MY+ GD+D A+ V
Sbjct: 75 PHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVV 134
Query: 174 FEEMKERDVTTYNSLIAGLAMHG---RSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
F+ + YNS+I HG +E + M G+ T VL +C+
Sbjct: 135 FDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADL 194
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGS 290
V +G + R G+E ++D+ + G +A M I D +
Sbjct: 195 SRVCMGRCVHGQGLR-VGLEGDFYVGASLIDMYVKCGVIGDARKLFDKM-IVRDMASWNA 252
Query: 291 LLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
L++ G++ + E + +R ++ R+ S T ++ + Y +G ++A+ + +M + G
Sbjct: 253 LIAGYMKEGEIGVAEDLFER-MEHRNIVSWTAMI--SGYTQNGFAEQALGLFDEMLQDGS 309
Query: 351 QKEPG-------------CSSIEVNNEIHEFILG 371
+ +P +++E IH+F G
Sbjct: 310 EMKPNWVTIVSVLPACAQSAALERGRRIHDFANG 343
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/497 (42%), Positives = 318/497 (63%), Gaps = 9/497 (1%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPE-------CNDVVAS 53
E E+ ++++ +R + T + +V + G + Q+ + + + +
Sbjct: 179 EALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIV 238
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
+I+ Y + G VE AF +F + KD V W +I G AL LF+EM R
Sbjct: 239 NALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGEC 298
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG--GALINMYSRCGDIDKAL 171
PN+VT++ VL AC+ LGA+++GRWIH Y+ K + + +LI+MY++CGDI+ A
Sbjct: 299 PNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAH 358
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
QVF M R ++++N++I G AMHGR+ A ++F M + P +TFVG+L+ACSH G
Sbjct: 359 QVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSG 418
Query: 232 LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSL 291
L+DLG +IF+SMT+DY + P++EHYGC++DLL G +EA + I M + PD ++ SL
Sbjct: 419 LLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSL 478
Query: 292 LSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
L ACK HG L+L E A++L+ +SG+YVLLSN YA++G+W++ ++R + G++
Sbjct: 479 LKACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMK 538
Query: 352 KEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDW 411
K PGCSSIEV++ +HEFI+GD HP+R +IY ++E+ ++ G++P T VL ++E+
Sbjct: 539 KVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLEEMDVQLEEAGFAPDTSEVLQEMEEE 598
Query: 412 EKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDR 471
KE AL HSE+LAI +GLISTKP T + +VKNLRVC +CH KLI+ I KR+I+ RDR
Sbjct: 599 WKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIVARDR 658
Query: 472 NRFHHFENGTCSCGDYW 488
RFHHF +G CSC DYW
Sbjct: 659 TRFHHFRDGVCSCCDYW 675
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 123/350 (35%), Positives = 183/350 (52%), Gaps = 40/350 (11%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR+IH QVLKLG +R L+ +Y + G +DA ++FD DVV+ T +I Y
Sbjct: 82 EGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSH-RDVVSCTALITGY 140
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G +A +VF + +D V W AMI G V NG AL+LF+EM R NVRP+E T+V
Sbjct: 141 ASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLV 200
Query: 121 CVLSACSQLGALELGRWIHSYM----GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
V+SAC+Q G++ELGR +HS++ H + + ALI++YS+CGD++ A +FE
Sbjct: 201 SVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEG 260
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
+ +DV ++N+LI G EA+ +F+EM+ G P VT + VL AC+H G +D+G
Sbjct: 261 LSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIG 320
Query: 237 FEIFQSMTRDY-GIEPQIEHYGCIVDLLSRV----------------------------- 266
I + + G+ + ++D+ ++
Sbjct: 321 RWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFA 380
Query: 267 --GRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
GR A+D + M ++ PD I LLSAC G L LG QI K +
Sbjct: 381 MHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSM 430
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 117/245 (47%), Gaps = 34/245 (13%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A VF ++ + + W M+ G + + AL+++ M PN + +L +C++
Sbjct: 17 AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAK 76
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSR---------------------C--- 164
A E GR IH+ + K L+ V +LI+MY+R C
Sbjct: 77 SKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTAL 136
Query: 165 -------GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTK 217
GD A +VF+E+ ERDV ++N++I G +GR EA+E+F+EM+ +RP +
Sbjct: 137 ITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDE 196
Query: 218 VTFVGVLNACSHGGLVDLGFEIFQ---SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYD 274
T V V++AC+ G ++LG ++ D+G ++ ++DL S+ G E A+
Sbjct: 197 GTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFG 256
Query: 275 FITNM 279
+
Sbjct: 257 LFEGL 261
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/521 (41%), Positives = 322/521 (61%), Gaps = 34/521 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPEC---NDVVASTVMIN 58
GR +H +LK GL + R+ LV++Y K E A+++FDE PE V+ V+I+
Sbjct: 159 GRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIH 218
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV------ 112
Y G + A E+F + KDT W ++I+G ++ G+M RA +LF +M NV
Sbjct: 219 GYCRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTM 278
Query: 113 -------------------------RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRI 147
RPN+ TIV LSAC+++GAL+ G IH+Y+ +
Sbjct: 279 VNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGF 338
Query: 148 DLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
LN ++G AL++MY++CG+I+ A +VF E KE+ + ++ +I G A+HG +A++ F
Sbjct: 339 KLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEW 398
Query: 208 MINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
M G +P V F+ VLNACSH G V+ G + F +M R Y IEP ++HY +VD+L R G
Sbjct: 399 MKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAG 458
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSN 327
R +EA FI M I PD ++ G+L AC+ H +++ E +K+LL G+YV LSN
Sbjct: 459 RLDEALKFIRAMPITPDFVVWGALFCACRTHKNVEMAELASKKLLQLEPKHPGSYVFLSN 518
Query: 328 AYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQE 387
AYAS G+W +A ++R M++ G K+PG S IEV++++H F+ GD H + +IY K+ E
Sbjct: 519 AYASVGRWDDAERVRVSMRDHGAHKDPGWSFIEVDHKLHRFVAGDNTHNRAVEIYSKLDE 578
Query: 388 LKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRV 447
+ + +GY+ E VLH+IE+ EKE AL HSE+LA+ +G++ST+P TT+R+VKNLRV
Sbjct: 579 ISASAREKGYTKEIECVLHNIEEEEKEEALGYHSEKLALAFGIVSTRPGTTVRIVKNLRV 638
Query: 448 CNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
C DCHS +K + ++KR+II+RD RFHHF +G CSCGDYW
Sbjct: 639 CVDCHSFMKYASKMSKREIILRDMKRFHHFNDGVCSCGDYW 679
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 149/330 (45%), Gaps = 34/330 (10%)
Query: 39 QLFDEMPECNDVVASTVMINCYVEH----GLVENAFEVFSRVKVKDTVCWTAMIDGLVRN 94
Q+ ++ CN V +S+ ++ ++ V+ A +F R ++K++ + A+I GL N
Sbjct: 60 QIHGQLYRCN-VFSSSRVVTQFISSCSSLNSVDYAISIFQRFELKNSYLFNALIRGLAEN 118
Query: 95 GEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG 154
++ F M + + P+ +T VL + + L +GR +H + K ++ + V
Sbjct: 119 SRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDSFVR 178
Query: 155 GALINMYSRCGDIDKALQVFEE----MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
+L++MY + ++ AL+VF+E +K V +N LI G G ++A E+F M
Sbjct: 179 VSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSM-- 236
Query: 211 QGIRPTKVT--FVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGR 268
P K T + ++N G + E+F M E + + +V+ S+ G
Sbjct: 237 ----PKKDTGSWNSLINGFMKMGDMGRAKELFVKMP-----EKNVVSWTTMVNGFSQNGD 287
Query: 269 PEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVL- 324
PE+A + M P+ + S LSAC G L G +I L S + L
Sbjct: 288 PEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYL----SGNGFKLNLV 343
Query: 325 ----LSNAYASSGKWKEAVQIRAKMKEAGV 350
L + YA G + A ++ + KE G+
Sbjct: 344 IGTALVDMYAKCGNIEHAEKVFHETKEKGL 373
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 29/229 (12%)
Query: 136 RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMH 195
R IH + + + + V I+ S +D A+ +F+ + ++ +N+LI GLA +
Sbjct: 59 RQIHGQLYRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQRFELKNSYLFNALIRGLAEN 118
Query: 196 GRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HGGLVDLGFEIFQSMT 244
R ++ F M+ I P ++TF VL + + H G++ G E F S
Sbjct: 119 SRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLE-FDSFV 177
Query: 245 RDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGS-LLSACKIHGKLQL 303
R +VD+ +V EE + +P+ + GS L+ IHG ++
Sbjct: 178 RV-----------SLVDMYVKV---EELGSALKVFDESPESVKNGSVLIWNVLIHGYCRM 223
Query: 304 GEQI-AKRLLDCRS-ADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
G+ + A L D D+G++ L N + G A ++ KM E V
Sbjct: 224 GDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNV 272
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/491 (43%), Positives = 317/491 (64%), Gaps = 5/491 (1%)
Query: 2 GREIHGQVLKLG-LRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
G+++H Q + +G S+ +++LY KCG A ++FDEM E DVV+ T +I Y
Sbjct: 161 GKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSE-RDVVSWTELIVAY 219
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++G +E+A +F + KD V WTAM+ G +NG AL+ F++MQ + +EVT+
Sbjct: 220 AKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLA 279
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDL--NHIVGGALINMYSRCGDIDKALQVFEEMK 178
V+SAC+QLGA++ WI + N +VG ALI+MYS+CG D+A +VFE MK
Sbjct: 280 GVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMK 339
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
ER+V +Y+S+I G AMHGR+ A+++F +M+ IRP KVTF+G+L+ACSH GLV+ G +
Sbjct: 340 ERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQ 399
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
+F M + +G+ P +HY C+VDLL R G EEA D + M + P+ + G+LL AC+IH
Sbjct: 400 LFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIH 459
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
G + + A L G Y+LLSN YAS+G+W+E ++R ++E G +K PGCS
Sbjct: 460 GNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSW 519
Query: 359 IE-VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
E N EIH+F GD HP+ +I + +++L + ++ GY P+ +D+ D EKE L
Sbjct: 520 FEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERIL 579
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LA+ YGL+ T+ TI+++KN+R+C DCH+++ + IT R+IIVRD RFHHF
Sbjct: 580 MSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHF 639
Query: 478 ENGTCSCGDYW 488
NGTCSCG++W
Sbjct: 640 HNGTCSCGNFW 650
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 157/348 (45%), Gaps = 40/348 (11%)
Query: 44 MPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDL 103
+ +C+ V+ + + V+ + VF +V + WTAMI G G ++ + +
Sbjct: 70 LSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSESTNF 129
Query: 104 FREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHS---YMGKHRIDLNHIVGGALINM 160
+ M+RD V P T + AC ++LG+ +H+ +G DL VG ++I++
Sbjct: 130 YTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDL--YVGNSMIDL 187
Query: 161 YSRCGDIDKALQVFEEMKERDVTTYNSLI------------------------------- 189
Y +CG + A +VF+EM ERDV ++ LI
Sbjct: 188 YVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMV 247
Query: 190 AGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRD-YG 248
G A +GR EA+E F++M + G+ +VT GV++AC+ G V I R +G
Sbjct: 248 TGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFG 307
Query: 249 IEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIA 308
+ ++D+ S+ G P+EAY MK + S++ +HG+ Q+
Sbjct: 308 PSGNVVVGSALIDMYSKCGSPDEAYKVFEVMK-ERNVFSYSSMILGYAMHGRAHSALQLF 366
Query: 309 KRLLDCR-SADSGTYVLLSNAYASSGKWKEAVQIRAKM-KEAGVQKEP 354
+L + T++ + +A + +G ++ Q+ AKM K GV P
Sbjct: 367 HDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSP 414
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/494 (43%), Positives = 322/494 (65%), Gaps = 8/494 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIH VLK+G S+ + L+ +Y CG +DA +LFDE P + V ++++ YV
Sbjct: 148 GKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAG-YV 206
Query: 62 ---EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVT 118
+ G V A+++F+ + KD V W+A+I G +NG AL +F EM + +R +EV
Sbjct: 207 KKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVV 266
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYS----RCGDIDKALQVF 174
+V VLSAC+ L ++ G+ IH + + I+ + ALI+MYS +CG ++ AL+VF
Sbjct: 267 VVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVF 326
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
M+E+ V+++N+LI GLA++G +++MF EM N G+ P ++TF+GVL AC H GLVD
Sbjct: 327 NGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVD 386
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
G F SM +GIEP ++HYGC+VDLL R G EA I +M +APD G+LL A
Sbjct: 387 EGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGA 446
Query: 295 CKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
CK HG ++GE++ ++L++ + G +VLLSN +AS G W++ +++R MK+ GV K P
Sbjct: 447 CKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTP 506
Query: 355 GCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKE 414
GCS IE N +HEF+ GD HP ++ + E+ + +K+EGY+P T V DI++ EKE
Sbjct: 507 GCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKE 566
Query: 415 WALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRF 474
L HSE+LAI +GL++ P T IR++KNLR+CNDCH+ KLI+ R+I+VRDR+RF
Sbjct: 567 TTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRF 626
Query: 475 HHFENGTCSCGDYW 488
H+F+ G CSC DYW
Sbjct: 627 HYFKEGACSCMDYW 640
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 120/254 (47%), Gaps = 41/254 (16%)
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
++ + ++F R++ + W M+ +++ +AL L++ M ++NV P+ T V+ A
Sbjct: 79 LDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQA 138
Query: 126 CSQLGALEL-GRWIHSYMGKHRIDLNHIVGGALINMYSRCGD------------------ 166
C+ + LE G+ IH ++ K D + V LINMY+ CG+
Sbjct: 139 CA-VRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVS 197
Query: 167 ----------------IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
+ +A ++F EM E+D+ ++++LI+G +G EA+ MF EM
Sbjct: 198 WNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNA 257
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIV----DLLSRV 266
G+R +V V VL+AC+H +V G ++ + GIE + ++ D+ +
Sbjct: 258 NGMRLDEVVVVSVLSACAHLSIVKTG-KMIHGLVIRMGIESYVNLQNALIHMYSDMYMKC 316
Query: 267 GRPEEAYDFITNMK 280
G E A + M+
Sbjct: 317 GCVENALEVFNGME 330
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 205/433 (47%), Positives = 297/433 (68%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+++ Y G E+A++VF + +D V W ++I+G NG AL L+REM + V P+
Sbjct: 177 LVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPD 236
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
T+V +LSAC +LGAL LG +H YM K + N AL+++YS+CG+ A +VF+
Sbjct: 237 GFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFD 296
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
EM+ER V ++ SLI GLA++G EA+++F E+ QG++P+++TFVGVL ACSH G++D
Sbjct: 297 EMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDE 356
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
GF F+ M +YGI P+IEH+GC+VDLL R G+ +AYD+I NM + P+ ++ +LL AC
Sbjct: 357 GFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGAC 416
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
IHG L+LGE + SG +VLLSN YAS +W + +R M GV+K PG
Sbjct: 417 TIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKTPG 476
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
S +E+ N ++EFI+GD HPQ E+ Y + ++ Q++K+EGY P T VL DIE+ EKE
Sbjct: 477 YSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLADIEEEEKET 536
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
AL+ H+E++AI + L++T P T IR++KNLRVC DCH IKLI+ + +R+IIVRDR+RFH
Sbjct: 537 ALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFEREIIVRDRSRFH 596
Query: 476 HFENGTCSCGDYW 488
HF++G+CSC DYW
Sbjct: 597 HFKDGSCSCKDYW 609
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 110/213 (51%), Gaps = 2/213 (0%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR-DNVRPNEVTIVCVLSACS 127
A ++F++++ + W MI G + + A++LF +M ++ P+ T + A +
Sbjct: 88 AAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVA 147
Query: 128 QLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNS 187
+L + LG IHS + ++ D V +L++MYS G + A QVFE M RD +NS
Sbjct: 148 KLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNS 207
Query: 188 LIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDY 247
+I G A++G EA+ ++REM ++G+ P T V +L+AC G + LG + M +
Sbjct: 208 VINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVK-V 266
Query: 248 GIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
G+ ++DL S+ G +A M+
Sbjct: 267 GLVQNQHASNALLDLYSKCGNFRDAQKVFDEME 299
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 42/201 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H ++K+GL N+ L++LY KCG F+DA ++FDEM E
Sbjct: 256 GERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEE--------------- 300
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ V WT++I GL NG AL LF E++R ++P+E+T V
Sbjct: 301 -----------------RSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVG 343
Query: 122 VLSACSQLGALELG-----RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
VL ACS G L+ G R Y RI+ + G ++++ R G + A
Sbjct: 344 VLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHH----GCMVDLLCRAGKVGDAYDYIRN 399
Query: 177 MK-ERDVTTYNSLIAGLAMHG 196
M + + +L+ +HG
Sbjct: 400 MPVPPNAVIWRTLLGACTIHG 420
>gi|449468588|ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 558
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/442 (47%), Positives = 299/442 (67%), Gaps = 1/442 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D+ +I Y G +E A +VF + +D+V W+ +I + NG + ALDLF +M
Sbjct: 117 SDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKM 176
Query: 108 Q-RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
Q D V P+EVT++ V+SA S LG LELGRW+ +++G+ + ++ +G ALI+M+SRCG
Sbjct: 177 QLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGLGVSVALGTALIDMFSRCGS 236
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
ID+++ VFE+M R+V T+ +LI GL +HGRS EA+ MF M G++P VTF GVL A
Sbjct: 237 IDESIVVFEKMAVRNVLTWTALINGLGVHGRSTEALAMFHSMRKSGVQPDYVTFSGVLVA 296
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
CSHGGLV G++IF+S+ + Y ++P ++HYGC+VD+L R G EAYDF+ M + P+ I
Sbjct: 297 CSHGGLVKEGWDIFESIRKVYRMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSI 356
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
+ +LL AC H L L E++ ++ S+ +G VLLSN Y ++G+W E IR+KM+
Sbjct: 357 IWRTLLGACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKASIRSKMR 416
Query: 347 EAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH 406
E + KEPGCSSI V+ IHEF+ GD HPQ E I K + + ++ GY T+ VLH
Sbjct: 417 EKRIGKEPGCSSINVDQTIHEFVSGDNSHPQSEDITKFLSSIIGDLRNRGYMMQTKNVLH 476
Query: 407 DIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKI 466
DIE+ E+E +L+ HSE+LA+ + ++S K TIR++KNLR+C DCHS +K I+ +RKI
Sbjct: 477 DIEEEEREHSLSYHSEKLAVAFAILSMKDKRTIRIMKNLRICYDCHSFMKHISVRFERKI 536
Query: 467 IVRDRNRFHHFENGTCSCGDYW 488
I+RDRNRFHHFE G CSC DYW
Sbjct: 537 IIRDRNRFHHFEKGLCSCHDYW 558
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 125/230 (54%), Gaps = 7/230 (3%)
Query: 72 VFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGA 131
VFSR+ DT+ + +I R + +L F M+ + + + T VL ACS+L
Sbjct: 44 VFSRIPSPDTIAYNTIIRSHSRFFP-SHSLFYFFSMRSNGIPLDNFTFPFVLKACSRL-- 100
Query: 132 LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAG 191
++ +HS + K+ +D + V ALI +Y CG ++ A++VF+EM ERD +++++IA
Sbjct: 101 -QINLHLHSLIVKYGLDSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIAS 159
Query: 192 LAMHGRSIEAVEMFREM-INQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIE 250
+G + EA+++F +M + + P +VT + V++A SH G ++LG + + R G+
Sbjct: 160 FLNNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGR-LGLG 218
Query: 251 PQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ ++D+ SR G +E+ M + + + +L++ +HG+
Sbjct: 219 VSVALGTALIDMFSRCGSIDESIVVFEKMAVR-NVLTWTALINGLGVHGR 267
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Vitis vinifera]
Length = 1058
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/487 (43%), Positives = 309/487 (63%), Gaps = 2/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR IH +K G + N L+ +Y KCG +D +F + D V+ +I+
Sbjct: 574 GRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTI-RVKDTVSWNSLISGLS 632
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
E+ ++++A VF ++ +D V WTA+I V+ G ALDLF +M ++PN++T+
Sbjct: 633 ENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTS 692
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+LSAC LGA++LG H+ + K D VG +LI MY +CG D VFEEM E D
Sbjct: 693 LLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCGYED-GFCVFEEMPEHD 751
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ T+N+++ G A +G EA+++F +M +GI P +++F+GVL ACSH GLVD G+ F
Sbjct: 752 LITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFN 811
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SMT+ YGI P + HY C+VDLL R G EA I NM + PD ++ +LL AC+IH +
Sbjct: 812 SMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNV 871
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LG+++A+RL S TYVLLSN +AS G W + +IR MK+ G+ KEPG S I+V
Sbjct: 872 ELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQV 931
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N++H F+ GD H Q E+IY ++E + GY P T VLHD+E+ +K+ L HS
Sbjct: 932 KNKLHCFVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDTNFVLHDVEEEQKQNELLYHS 991
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ +G++ST + I+++KNLR+C DCH+ +K ++ +T RKII+RD NRFHHF +G+
Sbjct: 992 EKLAVVFGILSTPNGSPIQIIKNLRICGDCHTFMKFMSKVTLRKIIIRDGNRFHHFRDGS 1051
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 1052 CSCGDYW 1058
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 162/324 (50%), Gaps = 42/324 (12%)
Query: 19 STRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKV 78
+T+ ++ Y + G + A +FDE+ N VVA +I Y ++G+++ A ++F ++ V
Sbjct: 459 ATKTAMMTAYAQVGRIQKARLIFDEILNPN-VVAWNAIIAGYTQNGMLKEAKDLFQKMPV 517
Query: 79 KDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWI 138
K++ W AMI G V+N E AL+L E+ R P++ + LSAC+ +G +E+GR I
Sbjct: 518 KNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVI 577
Query: 139 HSYMGKHRIDLNHIVGGALINMYSRCGDI------------------------------- 167
HS K N V LI+MY++CG++
Sbjct: 578 HSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYML 637
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
D A VFE+M +RDV ++ ++I+ G A+++F +M+ +GI+P ++T +L+AC
Sbjct: 638 DDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSAC 697
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDH-- 285
+ G + LG E F ++ G + + ++ + + G E+ + M P+H
Sbjct: 698 GNLGAIKLG-EQFHALIFKLGFDTFLFVGNSLITMYFKCGY-EDGFCVFEEM---PEHDL 752
Query: 286 IMLGSLLSACKIHGKLQLGEQIAK 309
I ++L C +G LG++ K
Sbjct: 753 ITWNAVLVGCAQNG---LGKEAIK 773
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 149/344 (43%), Gaps = 61/344 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
E R + ++++ + S S ++ Y + G+ +A LFD N + T+++ Y
Sbjct: 189 EARRVFNEMIQRDVVSWNS----MINGYSQNGKVDEARLLFDAFVGKN-IRTWTILLTGY 243
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ G +E A EVF + ++ V W AMI G V+NG++ A LF EM NV
Sbjct: 244 AKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNV-------- 295
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
W N +V G Y C + +A ++F++M ER
Sbjct: 296 --------------ASW------------NSVVTG-----YCHCYRMSEARELFDQMPER 324
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+ ++ +I+G EA ++F +M RP + FV VL+A + GL DL E+
Sbjct: 325 NSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAIT--GLDDL--ELI 380
Query: 241 QSMTR---DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDH---IMLGSLLSA 294
S+ G E + I++ +R G + A F M ++ M+ +
Sbjct: 381 GSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQC 440
Query: 295 CKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEA 338
++ +QL E++ ++ + ++A + AYA G+ ++A
Sbjct: 441 GRLDDAIQLYERVPEQTVATKTA-------MMTAYAQVGRIQKA 477
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 163 RCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVG 222
R G +++A +VF EM +RDV ++NS+I G + +G+ EA +F + + IR T+
Sbjct: 183 RLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIR----TWTI 238
Query: 223 VLNACSHGGLVDLGFEIFQSMT 244
+L + G ++ E+F+SMT
Sbjct: 239 LLTGYAKEGRIEEAREVFESMT 260
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/487 (43%), Positives = 305/487 (62%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ IHG V+++G + T LV LY C DA QLFDEMPE
Sbjct: 108 GKMIHGIVIQMGFICDVYTSTALVHLYCTCLSISDASQLFDEMPE--------------- 152
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ V W A+I G N + +A+D FR M D +P+E T+V
Sbjct: 153 -----------------RNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTVVV 195
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLSACS LGA G+WIH ++ +R+ LN VG ALI+MY++CG + + +VFEE++E++
Sbjct: 196 VLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKN 255
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V T+N LI+G AM+G+ A++ F M+ + +P +VTF+GVL AC H GLV G F
Sbjct: 256 VYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFM 315
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM + +G++P+IEHYGC+VDLL R G EEA + I +M I PD I+ +LL AC++HG
Sbjct: 316 SMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNT 375
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LGE I KRL++ + YVLLSN Y+ +W E ++R M G++K PGCSSIE+
Sbjct: 376 KLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLRGMMNLRGIRKVPGCSSIEI 435
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
NN ++EF+ + R P+ E IYK++ L + +K GY T++ L+DIE EKE ++ HS
Sbjct: 436 NNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTGTDMALYDIEKEEKEHSVMYHS 495
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ +GL+++ T+R+VKNLR+C DCH K+++ + KR I+VRDRNRFHHF G
Sbjct: 496 EKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSLVYKRYIVVRDRNRFHHFYEGF 555
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 556 CSCRDYW 562
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 36/201 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ IH + LR N L+++Y KCG + ++F+E+ E N V V+I+ Y
Sbjct: 208 QGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKN-VYTWNVLISGY 266
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+G + A + FSR M +N +P+EVT +
Sbjct: 267 AMNGQGDAALQAFSR-------------------------------MLMENFKPDEVTFL 295
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG--GALINMYSRCGDIDKALQVFEEMK 178
VL AC G + GRW M K + L + G ++++ R G +++AL++ + M
Sbjct: 296 GVLCACCHQGLVTEGRWQFMSM-KQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMS 354
Query: 179 -ERDVTTYNSLIAGLAMHGRS 198
E D + +L+ +HG +
Sbjct: 355 IEPDPIIWRALLCACRVHGNT 375
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/465 (45%), Positives = 301/465 (64%), Gaps = 1/465 (0%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
++ Y +C A +LF+ MP C +V + MI Y ++G + A F R+ +D++
Sbjct: 303 IIAGYVQCKRMDQARELFEAMP-CQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSIS 361
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W A+I G ++G AL LF EM+RD R N T LS C+++ ALELG+ +H +
Sbjct: 362 WAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVV 421
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
K ++ VG AL+ MY +CG+ID A VFE ++E++V ++N++IAG A HG EA+
Sbjct: 422 KAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALM 481
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
+F M GI P VT VGVL+ACSH GLVD G E F SMT+DYGI +HY C++DLL
Sbjct: 482 LFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLL 541
Query: 264 SRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV 323
R GR ++A + + NM PD G+LL A +IHG +LGE+ AK + + +SG YV
Sbjct: 542 GRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYV 601
Query: 324 LLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYK 383
LLSN YA+SG+W + ++R +M++ GV+K PG S +EV N+IH F +GD HP+R++IY
Sbjct: 602 LLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYT 661
Query: 384 KMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVK 443
++EL +K EGY ST++VLHD+E+ EK L HSE+LA+ +G+++ IRV+K
Sbjct: 662 FLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVIK 721
Query: 444 NLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
NLRVC DCH+ +K I+ I R II+RD +RFHHF G CSCGDYW
Sbjct: 722 NLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 766
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 175/437 (40%), Gaps = 102/437 (23%)
Query: 28 YGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENA---FE------------- 71
Y + G K+A ++FDEMP C + ++ M+ YV++G +E+A FE
Sbjct: 152 YAQNGYVKEAKEIFDEMP-CKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCM 210
Query: 72 ---------------VFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
+F R+ +D V W MI G +NGE+ A LF E +V
Sbjct: 211 MGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDV---- 266
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMG-KHRIDLNHIVGG-------------------- 155
T ++S Q G L+ R + M K+ + N I+ G
Sbjct: 267 FTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQ 326
Query: 156 ------ALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
+I Y++ GDI +A F+ M +RD ++ ++IAG A G EA+ +F EM
Sbjct: 327 NVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMK 386
Query: 210 NQGIRPTKVTFVGVLNACS-----------HGGLVDLGFE----IFQSMTRDY------- 247
G R + TF L+ C+ HG +V G E + ++ Y
Sbjct: 387 RDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNID 446
Query: 248 -------GI-EPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACK 296
GI E ++ + ++ +R G +EA +MK I PD + + +LSAC
Sbjct: 447 DAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACS 506
Query: 297 IHGKLQLGEQIAKRLLDCR--SADSGTYVLLSNAYASSGKWKEAVQIRAKMK----EAGV 350
G + G + + +A+S Y + + +G+ +A + M A
Sbjct: 507 HTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATW 566
Query: 351 QKEPGCSSIEVNNEIHE 367
G S I N E+ E
Sbjct: 567 GALLGASRIHGNTELGE 583
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 154/345 (44%), Gaps = 24/345 (6%)
Query: 33 EFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLV 92
+F A QLF++MP D+V+ VMI+ V + + A +F ++ +D V W AM+ G
Sbjct: 95 KFYLARQLFEKMP-TRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYA 153
Query: 93 RNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHI 152
+NG + A ++F EM N ++ +L+A Q G +E R + + + D I
Sbjct: 154 QNGYVKEAKEIFDEMP----CKNSISWNGMLAAYVQNGRIEDARRLF----ESKADWELI 205
Query: 153 VGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG 212
++ Y + + A +F+ M ERD ++N++I+G A +G +EA +F E +
Sbjct: 206 SWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRD 265
Query: 213 IRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
+ T+ +++ G++D +F M + G + R+ + E
Sbjct: 266 V----FTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYV--QCKRMDQAREL 319
Query: 273 YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASS 332
++ + ++ + M+ I +++ +R DS ++ + YA S
Sbjct: 320 FEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQR-------DSISWAAIIAGYAQS 372
Query: 333 GKWKEAVQIRAKMKEAG--VQKEPGCSSIEVNNEIHEFILGDIRH 375
G +EA+ + +MK G + + S++ EI LG H
Sbjct: 373 GYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVH 417
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 37/212 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++HG+V+K GL S L+ +Y KCG DA +F+ + E +VV+ MI Y
Sbjct: 413 GKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEE-KEVVSWNTMIAGYA 471
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG + AL LF M++ + P++VT+V
Sbjct: 472 RHGFGK-------------------------------EALMLFESMKKTGILPDDVTMVG 500
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VLSACS G ++ G + +S + I N +I++ R G +D A + + M E
Sbjct: 501 VLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFE 560
Query: 180 RDVTTYNSLIAGLAMHGRS---IEAVEMFREM 208
D T+ +L+ +HG + +A +M EM
Sbjct: 561 PDAATWGALLGASRIHGNTELGEKAAKMIFEM 592
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 128/304 (42%), Gaps = 62/304 (20%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM- 107
D+V + I ++ +G ++A +F+ + + ++ W AMI G + N + A LF +M
Sbjct: 48 DIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMP 107
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
RD V N + CV R ++
Sbjct: 108 TRDLVSWNVMISGCV----------------------------------------RYRNL 127
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTK--VTFVGVLN 225
A +F++M ERDV ++N++++G A +G EA E+F EM P K +++ G+L
Sbjct: 128 RAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM------PCKNSISWNGMLA 181
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDH 285
A G ++ +F+S + ++ + C++ + R +A M D
Sbjct: 182 AYVQNGRIEDARRLFESKA-----DWELISWNCMMGGYVKRNRLVDARGIFDRMP-ERDE 235
Query: 286 IMLGSLLSACKIHGKLQLGEQI-AKRLLDCRSA-DSGTYVLLSNAYASSGKWKEAVQIRA 343
+ +++S G Q GE + A+RL + D T+ + + Y +G EA ++
Sbjct: 236 VSWNTMIS-----GYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFD 290
Query: 344 KMKE 347
M E
Sbjct: 291 GMPE 294
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/491 (43%), Positives = 312/491 (63%), Gaps = 36/491 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H Q+L+ GL D T +I+ Y
Sbjct: 83 GRSVHAQILRFGL--------------------------------AIDPFVQTSLISMYS 110
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR---DNVRPNEVT 118
GLV+ A +F+ + ++ + W+ MI+G VR G+ AL LFREMQ ++VRPNE T
Sbjct: 111 SSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFT 170
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM- 177
+ VL+AC +LGALE G+W H+Y+ K + ++ ++G ALI+MY++CG ++KA VF +
Sbjct: 171 MSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLG 230
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
+DV ++++I+GLAMHG + E V +F +MINQG+RP VTF+ V AC HGGLV G
Sbjct: 231 PNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGK 290
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
+ + MT DY I P I+HYGC+VDL R GR +EA++ + +M + PD ++ G+LLS ++
Sbjct: 291 DYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRM 350
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
HG ++ E K+L++ +SG YVLLSN YA G+W++ +R M+ G++K PGCS
Sbjct: 351 HGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCS 410
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IEV +HEF +GD HP+ QI+ ++E+ + +K+EGY +T+ VL D+++ KE AL
Sbjct: 411 LIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLLDLDEEGKELAL 470
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
++HSE+LA+ YG + T P T IR+VKNLR+C DCH IK+I+ + R+IIVRD NRFHHF
Sbjct: 471 SLHSEKLALAYGFLKTSPGTPIRIVKNLRICRDCHVAIKMISKVFDREIIVRDCNRFHHF 530
Query: 478 ENGTCSCGDYW 488
G CSC DYW
Sbjct: 531 TQGLCSCRDYW 541
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 111/228 (48%), Gaps = 9/228 (3%)
Query: 80 DTVCWTAMIDGLVR-----NGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALEL 134
++ W +I V+ G + +F M+ V+P+ T +L + + L L
Sbjct: 23 ESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHL 82
Query: 135 GRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAM 194
GR +H+ + + + ++ V +LI+MYS G +D A +F M ER+V +++ +I G
Sbjct: 83 GRSVHAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVR 142
Query: 195 HGRSIEAVEMFREMINQG---IRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEP 251
G+ EA+ +FREM G +RP + T GVL AC G ++ G + + G+
Sbjct: 143 CGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHG-KWAHAYIDKCGMPV 201
Query: 252 QIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+ ++D+ ++ G E+A +N+ D + +++S +HG
Sbjct: 202 DVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHG 249
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/489 (43%), Positives = 313/489 (64%), Gaps = 3/489 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H + + + + + ++++Y KCG +DA +LFD+MPE D+V+ T M+ Y
Sbjct: 256 GRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPE-KDIVSWTTMLVGYA 314
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ-RDNVRPNEVTIV 120
+ G + A +F + +D W A+I + G+ AL+LF E+Q +P+EVT+V
Sbjct: 315 KIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLV 374
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
LSAC+QLGA++LG WIH Y+ K + LN + +LI+MY +CGD+ KAL VF ++ +
Sbjct: 375 STLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERK 434
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++++IAGLAMHG +A+ +F +M ++P VTF +L ACSH GLV+ G F
Sbjct: 435 DVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFF 494
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
M YG+ P ++HY C+VD+L R G EEA + I M +AP + G+LL AC IH
Sbjct: 495 NQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHEN 554
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+ L EQ +L++ + G YVLLSN YA +GKW +R M++ G++KEPGCSSIE
Sbjct: 555 VVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIE 614
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE-KEWALAI 419
V+ +HEF++GD HP ++IY K+ E+ ++ GY P+ +L +E+ + KE AL +
Sbjct: 615 VDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFL 674
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GLIST IR+VKNLRVC DCHS+ KL++ + R+I++RDR RFHHF
Sbjct: 675 HSEKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFRE 734
Query: 480 GTCSCGDYW 488
G CSC DYW
Sbjct: 735 GHCSCMDYW 743
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 133/267 (49%), Gaps = 64/267 (23%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ HG V+K+ L S+ L+ Y KCGE
Sbjct: 155 GKAFHGMVIKVLLGSDVFILNSLIHFYAKCGEL--------------------------- 187
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
GL + VF + +D V W +MI V+ G AL+LF+EM+ NV+PN +T+V
Sbjct: 188 --GL---GYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVG 242
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLSAC++ E GRW+HSY+ ++RI + + A+++MY++CG ++ A ++F++M E+D
Sbjct: 243 VLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKD 302
Query: 182 VTT-------------------------------YNSLIAGLAMHGRSIEAVEMFREM-I 209
+ + +N+LI+ G+ EA+E+F E+ +
Sbjct: 303 IVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQL 362
Query: 210 NQGIRPTKVTFVGVLNACSHGGLVDLG 236
++ +P +VT V L+AC+ G +DLG
Sbjct: 363 SKTAKPDEVTLVSTLSACAQLGAMDLG 389
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 157/336 (46%), Gaps = 15/336 (4%)
Query: 25 VELYGKCGEFKDAMQLFDEMPECN---DVVASTVMINCYVEHGL--VENAFEVFSRVKVK 79
+ L +C E K Q+ +M D +++ +I ++ A +VF ++
Sbjct: 39 LSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHP 98
Query: 80 DTVCWTAMIDGLVRNGEMARALDLF-REMQRDNVRPNEVTIVCVLSACSQLGALELGRWI 138
+ W +I + ++L +F R + + P++ T ++ A S+L L G+
Sbjct: 99 NLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAF 158
Query: 139 HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRS 198
H + K + + + +LI+ Y++CG++ +VF + RDV ++NS+I G
Sbjct: 159 HGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCP 218
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGC 258
EA+E+F+EM Q ++P +T VGVL+AC+ + G + + R+ I +
Sbjct: 219 EEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNR-IGESLTLSNA 277
Query: 259 IVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGE-QIAKRLLDC-RS 316
++D+ ++ G E+A M D + ++L G ++GE A+ + D +
Sbjct: 278 MLDMYTKCGSVEDAKRLFDKMP-EKDIVSWTTMLV-----GYAKIGEYDAAQGIFDAMPN 331
Query: 317 ADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
D + L +AY GK KEA+++ +++ + K
Sbjct: 332 QDIAAWNALISAYEQCGKPKEALELFHELQLSKTAK 367
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/491 (43%), Positives = 315/491 (64%), Gaps = 5/491 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +HGQ L++GL + L+++Y KCG DA +LFD+M D+ + +I Y+
Sbjct: 126 GRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMI-VRDMASWNALIAGYM 184
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN--VRPNEVTI 119
+ G + A ++F R++ ++ V WTAMI G +NG +AL LF EM +D ++PN VTI
Sbjct: 185 KEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTI 244
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V VL AC+Q ALE GR IH + + LN V AL MY++C + +A F+ + +
Sbjct: 245 VSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQ 304
Query: 180 --RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
+++ +N++I A HG +EAV +F M+ G++P VTF+G+L+ CSH GL+D G
Sbjct: 305 NGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGL 364
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F M + +EP++EHY C+VDLL R GR EA + I+ M + + G+LL+AC+
Sbjct: 365 NHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRS 424
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
H L++ E A+RL +SG YVLLSN YA +G W+E ++RA +K G++K PGCS
Sbjct: 425 HRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCS 484
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IE+N + H F+ D HPQ ++IYK ++ L + +K+ GY P T VLHDI + EKE+ L
Sbjct: 485 WIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEEKEYNL 544
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LAI +GL++T+P +RV KNLR+C DCH+ K I+ I +R+IIVRD NRFH F
Sbjct: 545 TTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKFISKIYEREIIVRDLNRFHCF 604
Query: 478 ENGTCSCGDYW 488
++G+CSCGDYW
Sbjct: 605 KDGSCSCGDYW 615
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 122/266 (45%), Gaps = 27/266 (10%)
Query: 101 LDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINM 160
L+ + M + + T+ VL +C+ L + +GR +H + ++ + VG +LI+M
Sbjct: 92 LEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDM 151
Query: 161 YSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTF 220
Y +CG I A ++F++M RD+ ++N+LIAG G A ++F M ++ I V++
Sbjct: 152 YVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNI----VSW 207
Query: 221 VGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL------SRVGRPEEAYD 274
+++ + G + +F M +D G E + ++ IV +L + + R +D
Sbjct: 208 TAMISGYTQNGFAEQALGLFDEMLQD-GSEMK-PNWVTIVSVLPACAQSAALERGRRIHD 265
Query: 275 FITNMKI---APDHIMLGSLLSAC----KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSN 327
F + + + L + + C + + Q K L+ + +
Sbjct: 266 FANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLI--------AWNTMIT 317
Query: 328 AYASSGKWKEAVQIRAKMKEAGVQKE 353
AYAS G EAV I M AGVQ +
Sbjct: 318 AYASHGCGVEAVSIFENMLRAGVQPD 343
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/487 (43%), Positives = 305/487 (62%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ IHG V+++G + T LV LY C DA QLFDEMPE
Sbjct: 108 GKMIHGIVIQMGFICDVYTSTALVHLYCTCLSISDASQLFDEMPE--------------- 152
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ V W A+I G N + +A+D FR M D +P+E T+V
Sbjct: 153 -----------------RNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTVVV 195
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLSACS LGA G+WIH ++ +R+ LN VG ALI+MY++CG + + +VFEE++E++
Sbjct: 196 VLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKN 255
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V T+N LI+G AM+G+ A++ F M+ + +P +VTF+GVL AC H GLV G F
Sbjct: 256 VYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFM 315
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM + +G++P+IEHYGC+VDLL R G EEA + I +M I PD I+ +LL AC++HG
Sbjct: 316 SMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNT 375
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LGE I KRL++ + YVLLSN Y+ +W E ++R M G++K PGCSSIE+
Sbjct: 376 KLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLRGMMSLRGIRKVPGCSSIEI 435
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
NN ++EF+ + R P+ E IYK++ L + +K GY T++ L+DIE EKE ++ HS
Sbjct: 436 NNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTGTDMALYDIEKEEKEHSVMYHS 495
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ +GL+++ T+R+VKNLR+C DCH K+++ + KR I+VRDRNRFHHF G
Sbjct: 496 EKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSLVYKRYIVVRDRNRFHHFYEGF 555
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 556 CSCRDYW 562
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 36/201 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ IH + LR N L+++Y KCG + ++F+E+ E N V V+I+ Y
Sbjct: 208 QGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKN-VYTWNVLISGY 266
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+G + A + FSR M +N +P+EVT +
Sbjct: 267 AMNGQGDAALQAFSR-------------------------------MLMENFKPDEVTFL 295
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG--GALINMYSRCGDIDKALQVFEEMK 178
VL AC G + GRW M K + L + G ++++ R G +++AL++ + M
Sbjct: 296 GVLCACCHQGLVTEGRWQFMSM-KQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMS 354
Query: 179 -ERDVTTYNSLIAGLAMHGRS 198
E D + +L+ +HG +
Sbjct: 355 IEPDPIIWRALLCACRVHGNT 375
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/493 (43%), Positives = 319/493 (64%), Gaps = 5/493 (1%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQL---FDEMPECNDVVASTVMI 57
E E+ +++K +R + ST + +V + + Q+ D+ +++ +I
Sbjct: 203 EALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALI 262
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y++ G VE A +F + KD + W +I G AL LF+EM R PN+V
Sbjct: 263 DLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDV 322
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG--GALINMYSRCGDIDKALQVFE 175
T++ +L AC+ LGA+E+GRWIH Y+ K + + +LI+MY++CGDI+ A QVF+
Sbjct: 323 TMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFD 382
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
+ R ++++N++I G AMHGR+ A ++F M I P +TFVG+L+ACSH G++DL
Sbjct: 383 SILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDL 442
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G IF+SM DY I P++EHYGC++DLL G +EA + I M++ PD ++ SLL AC
Sbjct: 443 GRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKAC 502
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
K+HG ++LGE A+ L+ + G+YVLLSN YA++G+W E +IRA + + G++K PG
Sbjct: 503 KMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPG 562
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
CSSIE+++ +HEFI+GD HP+ +IY ++E++ +++ G+ P T VL ++E+ KE
Sbjct: 563 CSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEG 622
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
AL HSE+LAI +GLISTKP T + +VKNLRVC +CH KLI+ I KR+II RDR RFH
Sbjct: 623 ALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFH 682
Query: 476 HFENGTCSCGDYW 488
HF +G CSC DYW
Sbjct: 683 HFRDGVCSCNDYW 695
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 180/346 (52%), Gaps = 36/346 (10%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG++IHG VLKLG + L+ +Y + G +DA ++FD+ DVV+ T +I Y
Sbjct: 106 EGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSH-RDVVSYTALITGY 164
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G + +A ++F + +KD V W AMI G G AL+LF+EM + NVRP+E T+V
Sbjct: 165 ASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMV 224
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+SAC+Q ++ELGR +HS++ H N + ALI++Y +CG+++ A +FE + +
Sbjct: 225 SVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYK 284
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++N+LI G EA+ +F+EM+ G P VT + +L AC+H G +++G I
Sbjct: 285 DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIH 344
Query: 241 QSMT-RDYGIEPQIEHYGCIVDLLSRV-------------------------------GR 268
+ R G+ H ++D+ ++ GR
Sbjct: 345 VYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGR 404
Query: 269 PEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
A+D + M+ I PD I LLSAC G L LG I + +
Sbjct: 405 ANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 450
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 164/408 (40%), Gaps = 100/408 (24%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
R IH Q++K GL + KL+E F FD +P
Sbjct: 4 RMIHAQMIKTGLHNTNYALSKLIE-------FCVLSPHFDGLPY---------------- 40
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
A VF ++ + + W M G + + AL L+ M + PN T +
Sbjct: 41 ------AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFL 94
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L +C++ A G+ IH ++ K DL+ V +LI+MY + G ++ A +VF++ RDV
Sbjct: 95 LKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDV 154
Query: 183 TTYNSLIAGLAMH-------------------------------GRSIEAVEMFREMINQ 211
+Y +LI G A G + EA+E+F+EM+
Sbjct: 155 VSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKT 214
Query: 212 GIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEE 271
+RP + T V V++AC+ ++LG ++ S D+G ++ ++DL + G E
Sbjct: 215 NVRPDESTMVSVVSACAQSASIELGRQV-HSWIDDHGFGSNLKIVNALIDLYIKCGEVET 273
Query: 272 AYDFI------------------TNMKI----------------APDHIMLGSLLSACKI 297
A T+M + +P+ + + S+L AC
Sbjct: 274 ACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAH 333
Query: 298 HGKLQLGE----QIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQI 341
G +++G I KRL +A S L+ + YA G + A Q+
Sbjct: 334 LGAIEIGRWIHVYINKRLKGVANASSHRTSLI-DMYAKCGDIEAAQQV 380
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/465 (45%), Positives = 301/465 (64%), Gaps = 1/465 (0%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
++ Y +C A +LF+ MP C +V + MI Y ++G + A F R+ +D++
Sbjct: 222 IIAGYVQCKRMDQARELFEAMP-CQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSIS 280
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W A+I G ++G AL LF EM+RD R N T LS C+++ ALELG+ +H +
Sbjct: 281 WAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVV 340
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
K ++ VG AL+ MY +CG+ID A VFE ++E++V ++N++IAG A HG EA+
Sbjct: 341 KAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALM 400
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
+F M GI P VT VGVL+ACSH GLVD G E F SMT+DYGI +HY C++DLL
Sbjct: 401 LFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLL 460
Query: 264 SRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV 323
R GR ++A + + NM PD G+LL A +IHG +LGE+ AK + + +SG YV
Sbjct: 461 GRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYV 520
Query: 324 LLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYK 383
LLSN YA+SG+W + ++R +M++ GV+K PG S +EV N+IH F +GD HP+R++IY
Sbjct: 521 LLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYT 580
Query: 384 KMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVK 443
++EL +K EGY ST++VLHD+E+ EK L HSE+LA+ +G+++ IRV+K
Sbjct: 581 FLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVIK 640
Query: 444 NLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
NLRVC DCH+ +K I+ I R II+RD +RFHHF G CSCGDYW
Sbjct: 641 NLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 685
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 175/437 (40%), Gaps = 102/437 (23%)
Query: 28 YGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENA---FE------------- 71
Y + G K+A ++FDEMP C + ++ M+ YV++G +E+A FE
Sbjct: 71 YAQNGYVKEAKEIFDEMP-CKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCM 129
Query: 72 ---------------VFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
+F R+ +D V W MI G +NGE+ A LF E +V
Sbjct: 130 MGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDV---- 185
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMG-KHRIDLNHIVGG-------------------- 155
T ++S Q G L+ R + M K+ + N I+ G
Sbjct: 186 FTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQ 245
Query: 156 ------ALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
+I Y++ GDI +A F+ M +RD ++ ++IAG A G EA+ +F EM
Sbjct: 246 NVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMK 305
Query: 210 NQGIRPTKVTFVGVLNACS-----------HGGLVDLGFE----IFQSMTRDY------- 247
G R + TF L+ C+ HG +V G E + ++ Y
Sbjct: 306 RDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNID 365
Query: 248 -------GI-EPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACK 296
GI E ++ + ++ +R G +EA +MK I PD + + +LSAC
Sbjct: 366 DAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACS 425
Query: 297 IHGKLQLGEQIAKRLLDCR--SADSGTYVLLSNAYASSGKWKEAVQIRAKMK----EAGV 350
G + G + + +A+S Y + + +G+ +A + M A
Sbjct: 426 HTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATW 485
Query: 351 QKEPGCSSIEVNNEIHE 367
G S I N E+ E
Sbjct: 486 GALLGASRIHGNTELGE 502
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 135/320 (42%), Gaps = 45/320 (14%)
Query: 34 FKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVR 93
+ A LFD+MPE DVV+ M++ Y ++G V+ A E+F + K+++ W M+ V+
Sbjct: 46 LRAARLLFDQMPE-RDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQ 104
Query: 94 NGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG-KHRIDLNHI 152
NG + A LF + ++ C++ + L R I M + + N +
Sbjct: 105 NGRIEDARRLFESKADWEL----ISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTM 160
Query: 153 VGG--------------------------ALINMYSRCGDIDKALQVFEEMKERDVTTYN 186
+ G A+++ Y + G +D+A +VF+ M E++ ++N
Sbjct: 161 ISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWN 220
Query: 187 SLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRD 246
++IAG R +A E+F M Q + G + G + F M +
Sbjct: 221 AIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGY----AQNGDIAQARNFFDRMPQR 276
Query: 247 YGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI---MLGSLLSACKIHGKLQL 303
I + I+ ++ G EEA MK + + S LS C L+L
Sbjct: 277 DSIS-----WAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALEL 331
Query: 304 GEQIAKRLLDCRSADSGTYV 323
G+Q+ R++ +SG YV
Sbjct: 332 GKQVHGRVVKA-GLESGCYV 350
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 37/212 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++HG+V+K GL S L+ +Y KCG DA +F+ + E +VV+ MI Y
Sbjct: 332 GKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEE-KEVVSWNTMIAGYA 390
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG + AL LF M++ + P++VT+V
Sbjct: 391 RHGFGK-------------------------------EALMLFESMKKTGILPDDVTMVG 419
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VLSACS G ++ G + +S + I N +I++ R G +D A + + M E
Sbjct: 420 VLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFE 479
Query: 180 RDVTTYNSLIAGLAMHGRS---IEAVEMFREM 208
D T+ +L+ +HG + +A +M EM
Sbjct: 480 PDAATWGALLGASRIHGNTELGEKAAKMIFEM 511
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 21/189 (11%)
Query: 163 RCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTK--VTF 220
R ++ A +F++M ERDV ++N++++G A +G EA E+F EM P K +++
Sbjct: 42 RYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM------PCKNSISW 95
Query: 221 VGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
G+L A G ++ +F+S + ++ + C++ + R +A M
Sbjct: 96 NGMLAAYVQNGRIEDARRLFESKA-----DWELISWNCMMGGYVKRNRLVDARGIFDRMP 150
Query: 281 IAPDHIMLGSLLSACKIHGKLQLGEQI-AKRLLDCRSA-DSGTYVLLSNAYASSGKWKEA 338
D + +++S G Q GE + A+RL + D T+ + + Y +G EA
Sbjct: 151 -ERDEVSWNTMIS-----GYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEA 204
Query: 339 VQIRAKMKE 347
++ M E
Sbjct: 205 RRVFDGMPE 213
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/479 (43%), Positives = 315/479 (65%), Gaps = 4/479 (0%)
Query: 14 LRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMINCYVEHGLVENAF 70
LR + T + LV + G + L E ++ + +++ Y + +E+A
Sbjct: 209 LRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQ 268
Query: 71 EVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLG 130
EVF+R++ KD + WT+M+ GL ++G AL LF++MQ + + +E+T+V VLSAC+Q G
Sbjct: 269 EVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTG 328
Query: 131 ALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIA 190
AL+ G++IH + K I+ + ++ AL++MY++CG ID ALQVF M+ R+V T+N+LI
Sbjct: 329 ALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIG 388
Query: 191 GLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIE 250
GLAMHG +A+ +F +M + + P VTF+ +L ACSH GLVD G +FQ+M + IE
Sbjct: 389 GLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIE 448
Query: 251 PQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKR 310
P++EHYGC+VDLL R + ++A FI NM I + ++ +LL AC+ G L E+I +R
Sbjct: 449 PRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRR 508
Query: 311 LLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFIL 370
+++ G YV+LSN YA +W A+++R +MK G++K PGCS IE+N IH+F+
Sbjct: 509 VIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVA 568
Query: 371 GDIRHPQREQIYKKMQELKQIVKLE-GYSPSTEVVLHDIEDWEKEWALAIHSERLAICYG 429
GD H Q EQIY ++E+ + V L+ G+ P T VL DIE+ EKE +L +HSE+LAI G
Sbjct: 569 GDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALG 628
Query: 430 LISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
LIST + IR+VKNLRVCNDCHS +K+ + + R+I+ RDR+RFHHF+ G+CSC D+W
Sbjct: 629 LISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 687
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 176/358 (49%), Gaps = 43/358 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR H +VLK G S+ L++ Y CG F A +FDE STV
Sbjct: 130 GRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDE---------STV------ 174
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR-DNVRPNEVTIV 120
+D V W MI+ + G +A DL EM + DN+RP+EVT+V
Sbjct: 175 -----------------RDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMV 217
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
++ AC+QLG LE G+++HSY + +D N V A+++MY +C DI+ A +VF ++E+
Sbjct: 218 SLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREK 277
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++ S+++GLA G EA+ +F++M I ++T VGVL+AC+ G +D G +
Sbjct: 278 DVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQG-KYI 336
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG- 299
+ + I + +VD+ ++ G + A M++ + +L+ +HG
Sbjct: 337 HLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVR-NVFTWNALIGGLAMHGH 395
Query: 300 ---KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
+ L +Q+ D D T++ L A + +G E + + MK Q EP
Sbjct: 396 GEDAISLFDQMEH---DKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNK-FQIEP 449
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 149/339 (43%), Gaps = 44/339 (12%)
Query: 48 NDVVASTVMINCYVEH-GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
N + +S ++ + H G + A ++F++++ D MI G R+ A+ L+
Sbjct: 42 NPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYF 101
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M V + T VL+AC++LGA++LGR H + K+ + V ALI Y CG
Sbjct: 102 MVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGS 161
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN-QGIRPTKVTFVGVLN 225
A VF+E RDV T+N +I G S +A ++ EM +RP +VT V ++
Sbjct: 162 FGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVP 221
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDL----------------------- 262
AC+ G ++ G + S +++ G++ + I+D+
Sbjct: 222 ACAQLGNLERG-KFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVL 280
Query: 263 --------LSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQ----I 307
L++ G +EA M KI D I L +LSAC G L G+ I
Sbjct: 281 SWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLI 340
Query: 308 AKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
K ++C D L + YA G A+Q+ +M+
Sbjct: 341 DKFEINC---DLVLETALVDMYAKCGSIDLALQVFRRMR 376
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 33/204 (16%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ IH + K + + LV++Y KCG
Sbjct: 332 QGKYIHLLIDKFEINCDLVLETALVDMYAKCGS--------------------------- 364
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++ A +VF R++V++ W A+I GL +G A+ LF +M+ D + P++VT +
Sbjct: 365 -----IDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFI 419
Query: 121 CVLSACSQLGALELGRWIHSYM-GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+L ACS G ++ G + M K +I+ G ++++ R +D AL E M
Sbjct: 420 ALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPI 479
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVE 203
+ + + + G G + E
Sbjct: 480 KANSVLWATLLGACRSGGHFDLAE 503
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/490 (44%), Positives = 315/490 (64%), Gaps = 5/490 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +HG V+K G S+ LV +Y DA ++FDEMP+ DV+ T ++ Y
Sbjct: 176 GENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQ-RDVITWTSVVKGYA 234
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ-RDNVRPNEVTIV 120
G + A E+F + ++ V W M+ G V + AL F +M D V+PNE +V
Sbjct: 235 MRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLV 294
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+LSAC+ LGAL+ G+WIH Y+ K+RI L+ + ALI+MY++CG ID A +VF+ + +R
Sbjct: 295 SILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLHKR 354
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D+ T+ S+I+GL+MHG E + F EM+ +G +P +T +GVLN CSH GLV+ G IF
Sbjct: 355 DLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLSIF 414
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
M +GI P++EHYGC++DLL R GR E A++ I +M + PD + +LLSAC+IHG
Sbjct: 415 HDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSACRIHGD 474
Query: 301 LQLGEQIAKRLLD-CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+ LGE+I + + C + G YVLLSN YAS G+W+ ++R M + G + PGCS I
Sbjct: 475 VDLGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQRGSEGCPGCSWI 534
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLE-GYSPSTEVVLHDIEDWEKEWALA 418
E++ +HEF+ D HP+ +I KK+ E+ + + +E GY PST+ VL D+ + +KE A++
Sbjct: 535 EIDGVVHEFLAADKLHPRISEINKKLNEVLRRISIEGGYVPSTKQVLFDLNEEDKEQAVS 594
Query: 419 IHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFE 478
HSE+LA+ +GL+ST+ TIR+ KNLR C DCHS +K I+ + R+I+VRDR+RFH F
Sbjct: 595 WHSEKLAVAFGLLSTQE-GTIRITKNLRTCEDCHSAMKTISLVFNREIVVRDRSRFHTFR 653
Query: 479 NGTCSCGDYW 488
G CSC DYW
Sbjct: 654 YGNCSCTDYW 663
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 109/251 (43%), Gaps = 59/251 (23%)
Query: 1 EGREIHGQVLK--LGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMIN 58
+G+ IH + K + L SN ST L+++Y KCG A ++FD + + D++ T MI+
Sbjct: 308 QGKWIHVYIDKNRILLSSNIST--ALIDMYAKCGRIDCARRVFDGLHK-RDLLTWTSMIS 364
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVT 118
GL +G A L F EM + +P+++T
Sbjct: 365 -------------------------------GLSMHGLGAECLWTFSEMLAEGFKPDDIT 393
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG-----GALINMYSRCGDIDKALQV 173
++ VL+ CS G +E G I M I L IV G LI++ R G ++ A +
Sbjct: 394 LLGVLNGCSHSGLVEEGLSIFHDM----IPLWGIVPKLEHYGCLIDLLGRAGRLESAFEA 449
Query: 174 FEEMK-ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
+ M E DV + +L++ +HG V++ +IN + L SHGG
Sbjct: 450 IKSMPMEPDVVAWRALLSACRIHGD----VDLGERIINH---------IAELCPGSHGGG 496
Query: 233 VDLGFEIFQSM 243
L ++ SM
Sbjct: 497 YVLLSNLYASM 507
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 84/195 (43%), Gaps = 19/195 (9%)
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
P+ T V +L L + + IH+ + H + N + G LI+ Y C ++ A V
Sbjct: 53 PSHSTFVQLLKKRPSLTQI---KQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIV 109
Query: 174 FEEMKERDVT-TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPT---KVTFVGVLNACS- 228
F++ T +N +I + S E++ +F +M+ G RPT K TF V ACS
Sbjct: 110 FDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHG-RPTSADKYTFTFVFTACSR 168
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---------YDFITNM 279
H L G + + +D G E I +V++ S R +A D IT
Sbjct: 169 HPTLRGYGENVHGMVVKD-GYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWT 227
Query: 280 KIAPDHIMLGSLLSA 294
+ + M G L+ A
Sbjct: 228 SVVKGYAMRGELVRA 242
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 198/487 (40%), Positives = 305/487 (62%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIHG ++ GL ++ L+++Y KC D+ +
Sbjct: 258 GKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCR---------------------- 295
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
VF+ + +D + W ++I G V+NG L FR+M ++P +
Sbjct: 296 ----------VFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSS 345
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
++ AC+ L L LG+ +H Y+ ++ D N + +L++MY++CG+I A Q+F+ M+ RD
Sbjct: 346 IMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRD 405
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++ ++I G A+HG++ +A+E+F +M +GI+P V F+ VL ACSHGGLVD ++ F
Sbjct: 406 MVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFN 465
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SMTRD+GI P +EHY + DLL R GR EEAYDFI M I P + +LLSAC++H +
Sbjct: 466 SMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNI 525
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+ E++A R+L+ ++G Y+LL+N Y+++ +WKEA + RA M+ G++K P CS IEV
Sbjct: 526 DMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEV 585
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N+++ F+ GD HP E+I + M+ L ++++ EGY P T V HD+E+ +K++ + HS
Sbjct: 586 KNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHS 645
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ERLAI +G+I+T TIRV KNLRVC DCH+ K I+ I R+I+VRD +RFHHF+NGT
Sbjct: 646 ERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGT 705
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 706 CSCGDYW 712
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 159/317 (50%), Gaps = 20/317 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKD-------AMQLFDEMPECNDVVAST 54
G +HG ++++GL + T L+ +Y K ++ A ++FDEM E V +
Sbjct: 125 GESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTV 184
Query: 55 VMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP 114
+++ ++ ++F + KD V W +I G RNG L + REM N++P
Sbjct: 185 SVLS-------EDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKP 237
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
+ T+ VL ++ + G+ IH + +D + V +LI+MY++C + + +VF
Sbjct: 238 DSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVF 297
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
+ ERD ++NS+IAG +G E + FR+M+ I+P +F ++ AC+H +
Sbjct: 298 TLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLH 357
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
LG ++ +TR+ G + I +VD+ ++ G A M++ D + +++
Sbjct: 358 LGKQLHGYITRN-GFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLR-DMVSWTAMIMG 415
Query: 295 CKIHGK----LQLGEQI 307
C +HG+ ++L EQ+
Sbjct: 416 CALHGQAPDAIELFEQM 432
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 122/285 (42%), Gaps = 34/285 (11%)
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
Y L+ ++ +F+ + + W ++I +G ++L F M + P+
Sbjct: 50 YSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVF 109
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSR-------------CGD 166
VL +C+ L L LG +H Y+ + +D + G AL+NMYS+ G+
Sbjct: 110 PSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGE 169
Query: 167 I-------------------DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
+ D ++FE M E+D+ ++N++IAG A +G E + M RE
Sbjct: 170 VFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIRE 229
Query: 208 MINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
M ++P T VL + + G EI R G++ I ++D+ ++
Sbjct: 230 MGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQ-GLDADIYVASSLIDMYAKCT 288
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
R ++ T + D I S+++ C +G G + +++L
Sbjct: 289 RVADSCRVFT-LLTERDGISWNSIIAGCVQNGLFDEGLRFFRQML 332
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/493 (43%), Positives = 319/493 (64%), Gaps = 7/493 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRL---KLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMIN 58
G++IH QV K LRS S L +V++Y KCG A ++F M A + M+
Sbjct: 231 GKQIHAQVYK-NLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVC 289
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVT 118
Y G + A ++F+ + +D + WTAMI G + G+ + AL+LF+EM+ ++P+EVT
Sbjct: 290 GYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVT 349
Query: 119 IVCVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+V VLSAC++LGA +LG R H Y+ + N I+ A+++MY++CG ID AL++F +
Sbjct: 350 LVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRV 409
Query: 178 KERDVT--TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
+ T +NS+IAGLA HG A+ +FRE+I+ G++P +VTFVGVL AC H GL++
Sbjct: 410 GKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEE 469
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G ++F+SM YGI+PQ+EHYGC+VDLL R G EEAYD + M + ++ +LLSAC
Sbjct: 470 GKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSAC 529
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
+ HG +++GE ++LL+ + YVLLSN A + +W+EA Q+R M++ G++K PG
Sbjct: 530 RTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPG 589
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
S IE+ IH F+ D HPQ ++I ++++ +K GY P+T V+ DI++ EKE
Sbjct: 590 WSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNTAQVMFDIDEEEKES 649
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
++ HSE+LA+ +GL+ P TIR+VKNLR+C DCH KL++ I R+I VRD RFH
Sbjct: 650 VVSYHSEKLALAFGLMYCSPTDTIRIVKNLRICADCHKAFKLVSEIYGREITVRDTMRFH 709
Query: 476 HFENGTCSCGDYW 488
HF NG+CSC D+W
Sbjct: 710 HFRNGSCSCMDFW 722
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 146/286 (51%), Gaps = 9/286 (3%)
Query: 72 VFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP-NEVTIVCVLSACSQLG 130
+FS++ + W MI G R+ A+ L+ M + P N T +L++C++L
Sbjct: 66 LFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLS 125
Query: 131 ALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIA 190
+LE G +HS++ KH + + V ALI++YS G+++ A +F+E RD+ +YN++I
Sbjct: 126 SLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIK 185
Query: 191 GLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDY-GI 249
G A + A+ +F EM N GI P + TFV + + CS ++G +I + ++ I
Sbjct: 186 GYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSI 245
Query: 250 EPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGE-QIA 308
+ I IVD+ ++ G A + M + S++ G + GE +A
Sbjct: 246 DSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVC-----GYARCGEINVA 300
Query: 309 KRLLD-CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
++L + D ++ + + Y+ +G+ EA+++ +M+ G++ +
Sbjct: 301 RKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPD 346
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 114/268 (42%), Gaps = 47/268 (17%)
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD---IDKALQVFEE 176
+C+L +C + + G IH+ + + LI+ +S G +D + +F +
Sbjct: 13 LCLLESCK---SFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQ 69
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIR-PTKVTFVGVLNACS------- 228
+ ++ +N++I G + EA+ ++ MI +GI P TF +LN+C+
Sbjct: 70 IDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEP 129
Query: 229 ----HGGLVDLGFE--------------IFQSMTR-----DYGIEPQIEHYGCIVDLLSR 265
H ++ GFE +F ++ D + + Y ++ +
Sbjct: 130 GHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAE 189
Query: 266 VGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQI-AKRLLDCRSADSGT 321
V +PE A + + N I PD +L S C + + +G+QI A+ + RS DS
Sbjct: 190 VNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSN- 248
Query: 322 YVLLSNA----YASSGKWKEAVQIRAKM 345
+LL +A YA G A ++ + M
Sbjct: 249 -ILLKSAIVDMYAKCGLINIAERVFSTM 275
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/452 (45%), Positives = 296/452 (65%), Gaps = 1/452 (0%)
Query: 37 AMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGE 96
A +LF+ MP C ++ + MI Y ++G + A ++F + +D V W A+I G +NG
Sbjct: 313 AGELFEAMP-CRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGH 371
Query: 97 MARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGA 156
AL++F EM+RD N T C LS C+ + ALELG+ +H + K + VG A
Sbjct: 372 YEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNA 431
Query: 157 LINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPT 216
L+ MY +CG D+A VFE ++E+DV ++N++IAG A HG +A+ +F M G++P
Sbjct: 432 LLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPD 491
Query: 217 KVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFI 276
++T VGVL+ACSH GL+D G E F SM RDY ++P +HY C++DLL R GR EEA + +
Sbjct: 492 EITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLM 551
Query: 277 TNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWK 336
NM P G+LL A +IHG +LGE+ A+ + +SG YVLLSN YA+SG+W
Sbjct: 552 RNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWV 611
Query: 337 EAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEG 396
+ ++R+KM+EAGVQK G S +EV N+IH F +GD HP++++IY ++EL ++ EG
Sbjct: 612 DVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMRREG 671
Query: 397 YSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIK 456
Y ST++VLHD+E+ EKE L HSE+LA+ +G+++ IRV+KNLRVC DCH+ IK
Sbjct: 672 YVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVMKNLRVCQDCHNAIK 731
Query: 457 LIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
I+ I R II+RD +RFHHF G CSCGDYW
Sbjct: 732 HISKIVGRLIILRDSHRFHHFSEGICSCGDYW 763
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 151/329 (45%), Gaps = 28/329 (8%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
++ Y + +F A LFD+MPE D+ + VM+ YV + + A ++F + KD V
Sbjct: 83 MISGYLRNAKFSLARDLFDKMPE-RDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVS 141
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGAL-ELGRWIHSYM 142
W AM+ G +NG + A ++F +M N ++ +L+A G L E R S
Sbjct: 142 WNAMLSGYAQNGFVDEAREVFNKMPHR----NSISWNGLLAAYVHNGRLKEARRLFESQS 197
Query: 143 GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAV 202
I N ++GG Y + + A Q+F+ M RDV ++N++I+G A G +A
Sbjct: 198 NWELISWNCLMGG-----YVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAK 252
Query: 203 EMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDL 262
+F E IR T+ +++ G+VD + F M ++ +I + +
Sbjct: 253 RLFNE---SPIRDV-FTWTAMVSGYVQNGMVDEARKYFDEMP----VKNEISYNAMLAGY 304
Query: 263 LS--RVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG 320
+ ++ E ++ + I+ + M+ I +L + + +R DC S
Sbjct: 305 VQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQR--DCVS---- 358
Query: 321 TYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
+ + + YA +G ++EA+ + +MK G
Sbjct: 359 -WAAIISGYAQNGHYEEALNMFVEMKRDG 386
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 114/252 (45%), Gaps = 38/252 (15%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++HGQV+K G + L+ +Y KCG +A +F+ + E DVV+ MI Y
Sbjct: 410 GKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEE-KDVVSWNTMIAGYA 468
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG F R +AL LF M++ V+P+E+T+V
Sbjct: 469 RHG--------FGR-----------------------QALVLFESMKKAGVKPDEITMVG 497
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VLSACS G ++ G + +S + + +I++ R G +++A + M +
Sbjct: 498 VLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFD 557
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN-ACSHGGLVDLGFE 238
++ +L+ +HG + E E EM+ + +V + N + G VD+G
Sbjct: 558 PGAASWGALLGASRIHGNT-ELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVG-- 614
Query: 239 IFQSMTRDYGIE 250
+S R+ G++
Sbjct: 615 KMRSKMREAGVQ 626
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 10/163 (6%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM- 107
D+V I+ ++ +G ++A VF+ + + +V + AMI G +RN + + A DLF +M
Sbjct: 45 DIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMP 104
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+RD N +L+ + L + M K + + A+++ Y++ G +
Sbjct: 105 ERDLFSWN-----VMLTGYVRNRRLGEAHKLFDLMPKKDV----VSWNAMLSGYAQNGFV 155
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
D+A +VF +M R+ ++N L+A +GR EA +F N
Sbjct: 156 DEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSN 198
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 124/284 (43%), Gaps = 30/284 (10%)
Query: 74 SRVKVKDT--VCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGA 131
S VK KD V W I +RNG AL +F M R + V+ ++S +
Sbjct: 37 SSVKFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRR----SSVSYNAMISGYLRNAK 92
Query: 132 LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAG 191
L R + M + + ++ Y R + +A ++F+ M ++DV ++N++++G
Sbjct: 93 FSLARDLFDKMPERDL----FSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSG 148
Query: 192 LAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEP 251
A +G EA E+F +M ++ +++ G+L A H G + +F+S +
Sbjct: 149 YAQNGFVDEAREVFNKMPHR----NSISWNGLLAAYVHNGRLKEARRLFESQS-----NW 199
Query: 252 QIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGE-QIAKR 310
++ + C++ + +A M + D I +++S G Q+G+ AKR
Sbjct: 200 ELISWNCLMGGYVKRNMLGDARQLFDRMPVR-DVISWNTMIS-----GYAQVGDLSQAKR 253
Query: 311 LLDCRS-ADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
L + D T+ + + Y +G EA R E V+ E
Sbjct: 254 LFNESPIRDVFTWTAMVSGYVQNGMVDEA---RKYFDEMPVKNE 294
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/487 (43%), Positives = 315/487 (64%), Gaps = 2/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ HG V++ GL S ++++Y KCG+ + A ++FD M VV+ + ++
Sbjct: 352 GKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSN-KTVVSWNSLTAGFI 410
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+G VE+A+EVF+++ ++ V W MI GLV+ A++LFREMQ + ++ + VT++
Sbjct: 411 RNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMG 470
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+ SAC LGA EL +W+H+Y+ K+ I + + AL++M++RCGD A+QVF +M ERD
Sbjct: 471 IASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERD 530
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V+ + + I +AM G A +F +M+ QG++P V FV VL ACSHGG V+ G IF
Sbjct: 531 VSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIF- 589
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
S+ D+GI PQIEHYGC+VDLL R G EA+D I +M + P+ ++ GSLL+AC++H +
Sbjct: 590 SLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNV 649
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++ A+R+ + +G +VLLSN YAS+GKW + ++R ++E GV+K PG SS++V
Sbjct: 650 EMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQV 709
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N IHEF GD HP+ I +QE+ G+ P VL D+++ EKE+ L+ HS
Sbjct: 710 NGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPDLSNVLLDVDEQEKEYLLSRHS 769
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GLI+T IRVVKNLR+C+DCHS K+ + I R+IIVRD NRFH F G
Sbjct: 770 EKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFAKMASIIYNREIIVRDNNRFHFFRQGL 829
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 830 CSCCDYW 836
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 172/322 (53%), Gaps = 18/322 (5%)
Query: 2 GRE---IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTV 55
GRE ++ ++L LG+ N T ++ K F + +Q+ + + DV
Sbjct: 112 GREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNC 171
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+I+ Y E G +++ +VF + ++ V WT++I G R A+ LF EM +RP+
Sbjct: 172 LIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPS 231
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
VT+VCV+SAC++L L++G + +Y+G+ + LN ++ AL++MY +CG ID A ++F+
Sbjct: 232 SVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFD 291
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
E +R++ YN++++ A G + EA+ + EM+ QG RP +VT + ++A + LVDL
Sbjct: 292 ECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQ--LVDL 349
Query: 236 GFEIFQSMTRDYGIEPQIEHY----GCIVDLLSRVGRPEEA---YDFITNMKIAPDHIML 288
+ + Y I +E + I+D+ + G+PE A +D ++N + + +
Sbjct: 350 ---FYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLT 406
Query: 289 GSLLSACKIHGKLQLGEQIAKR 310
+ + ++ QI +R
Sbjct: 407 AGFIRNGDVESAWEVFNQIPER 428
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 158/378 (41%), Gaps = 68/378 (17%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
+++H Q+ K GL ST KLV + PE D
Sbjct: 42 KQLHCQITKNGLDQIPSTLTKLVNAGAEIAS-----------PESLD------------- 77
Query: 63 HGLVENAFEVFSR-VKVKDTV-CWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
AFE+F V+ D + ++I G G A+ L+ M V PN T
Sbjct: 78 --YARKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFP 135
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLS C+++ A G +H + K ++ + + LI+ Y+ CG +D +VFE M ER
Sbjct: 136 FVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSER 195
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+V ++ SLI G A R EAV +F EM+ GIRP+ VT V V++AC+ +D+G
Sbjct: 196 NVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMG---- 251
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
E +I + + + +M+ +L+ G
Sbjct: 252 -----------------------------ERVCAYIGELGLKLNKVMVNALVDMYMKCGA 282
Query: 301 LQLGEQIAKRLLD-CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE--PGCS 357
+ AKRL D C + Y + + YA G +EA+ I +M + G + + S
Sbjct: 283 I----DAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLS 338
Query: 358 SIEVNNEIHEFILGDIRH 375
+I + ++ + G + H
Sbjct: 339 AISASAQLVDLFYGKVCH 356
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/524 (42%), Positives = 316/524 (60%), Gaps = 39/524 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G IHG VLK+GL N L+ +YGKCG +A ++FDEM DVV+ M+ Y
Sbjct: 138 GLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMI-WKDVVSWNSMVAGYA 196
Query: 62 EHGLVENAFEV-------------------------------------FSRVKVKDTVCW 84
+ ++A E+ F ++ K+ + W
Sbjct: 197 HNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSSENVLYVEKIFVNLERKNLISW 256
Query: 85 TAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGK 144
MI ++N +A+DL+ +M++ V P+ +T VL AC L AL LGR IH Y+ K
Sbjct: 257 NVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEK 316
Query: 145 HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEM 204
++ N ++ +LI+MY+RCG +D A +VF+ MK RDV ++ SLI+ M G+ AV +
Sbjct: 317 KKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVAL 376
Query: 205 FREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLS 264
F EM+N G P + FV +L+ACSH GL+D G F+ MT DY I P+IEHY C+VDLL
Sbjct: 377 FTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLG 436
Query: 265 RVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVL 324
R GR +EAY+ I M I P+ + +LLS+C++ + +G A LL SG YVL
Sbjct: 437 RAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVL 496
Query: 325 LSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKK 384
LSN YA +G+WKE +IR+ MK ++K PG S++E+NN++H F+ GD HPQ ++IY++
Sbjct: 497 LSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEE 556
Query: 385 MQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKN 444
+ L +K GY P T+ LHD+E+ +KE LA+HSE+LAI + L++T+ Y IR+ KN
Sbjct: 557 LGVLVAKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTQEY-QIRITKN 615
Query: 445 LRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
LRVC DCH KLI+ I +R+IIVRD NRFHHF++G CSCGDYW
Sbjct: 616 LRVCGDCHIAAKLISKIVEREIIVRDTNRFHHFKDGVCSCGDYW 659
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 164/384 (42%), Gaps = 74/384 (19%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
+++H + L N S +KL+ Y CGE ++FDEM +
Sbjct: 38 KKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSD---------------- 81
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
++ V + MI V N L +FREM RP+ T CV
Sbjct: 82 ----------------RNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCV 125
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L ACS L G IH + K +D N VG LI MY +CG + +A +VF+EM +DV
Sbjct: 126 LKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDV 185
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF--EIF 240
++NS++AG A + R +A+E+ REM + G +P T ++ A ++ ++ + +IF
Sbjct: 186 VSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSSENVLYVEKIF 245
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKI 297
++ R I + ++ + + P +A D M ++ PD I S+L AC
Sbjct: 246 VNLERKNLIS-----WNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGD 300
Query: 298 HGKLQLGEQI-------------------------------AKRLLD-CRSADSGTYVLL 325
L LG +I AKR+ D + D ++ L
Sbjct: 301 LSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSL 360
Query: 326 SNAYASSGKWKEAVQIRAKMKEAG 349
+AY +G+ AV + +M +G
Sbjct: 361 ISAYGMTGQGCNAVALFTEMLNSG 384
>gi|414885893|tpg|DAA61907.1| TPA: hypothetical protein ZEAMMB73_945776 [Zea mays]
Length = 584
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/490 (46%), Positives = 313/490 (63%), Gaps = 6/490 (1%)
Query: 4 EIHGQVLKLGL-RSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
++H K GL S+R R +LV Y CG A ++FD + ND+VA ++ Y +
Sbjct: 96 QLHAHAAKRGLVASHRRVRCRLVHAYAVCGMLPHARRVFDGGTD-NDMVAWNCLLRGYAQ 154
Query: 63 HGLVENAF-EVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPNEVTIV 120
G E+ + F+R+ +D+V W ++ V NGE A+ +FREM +P+ VT+V
Sbjct: 155 EGGDEDLLRDFFARMPSRDSVSWNTVLSWCVVNGEYDEAIAVFREMLASQECQPDRVTLV 214
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
V+SA + LGAL G W H+Y+ + I++ + ALINMYS+CG I+ A+ VF+ + +
Sbjct: 215 SVVSAIAYLGALAHGLWAHAYVFRKCIEVEEKLSSALINMYSKCGFIEGAVYVFDNVGGK 274
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
R + T+N+++AG +G S A+E+F M + + P K+TF VLNACSHGGLV+ G +
Sbjct: 275 RSLDTWNAMLAGFTANGYSERALELFTRMESTRLMPNKITFNTVLNACSHGGLVEEGMKY 334
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
FQ M+R YGIEP I HYGC+VDL R G E+A + I M + PD ML +LL AC+ H
Sbjct: 335 FQRMSRFYGIEPDIAHYGCMVDLFCRAGMFEKAEEIIQTMPMEPDASMLKALLGACRTHK 394
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
L+LG+++ RL++ + D YVLLSN YA G W ++R M + GV K PG SS+
Sbjct: 395 NLELGKKVGHRLIEAAANDHAGYVLLSNIYALDGNWGGVHKVRKLMLDRGVLKTPGSSSV 454
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE-KEWALA 418
E+N IHEFI GD H ++ IYK + E+ Q +K GY+P T VL DI+D + KE +LA
Sbjct: 455 ELNGVIHEFISGDKSHSRKRDIYKMLGEICQQLKSSGYTPDTSQVLLDIDDEDVKESSLA 514
Query: 419 IHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFE 478
+HSE+LAI +GLIST P T IRVV NLR+C DCH+ IKLI+ I R IIVRD NRFHHF
Sbjct: 515 LHSEKLAIAFGLISTAPGTPIRVVNNLRICGDCHNAIKLISKIYGRCIIVRDANRFHHFR 574
Query: 479 NGTCSCGDYW 488
G+CSCGDYW
Sbjct: 575 KGSCSCGDYW 584
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 73/412 (17%), Positives = 164/412 (39%), Gaps = 84/412 (20%)
Query: 100 ALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH-IVGGALI 158
AL LF + R P+ ++C++ +H++ K + +H V L+
Sbjct: 59 ALRLFDHLLRSGADPDPAAYELAFASCARARDRATAAQLHAHAAKRGLVASHRRVRCRLV 118
Query: 159 NMYSRCGDIDKALQVFE--------------------------------EMKERDVTTYN 186
+ Y+ CG + A +VF+ M RD ++N
Sbjct: 119 HAYAVCGMLPHARRVFDGGTDNDMVAWNCLLRGYAQEGGDEDLLRDFFARMPSRDSVSWN 178
Query: 187 SLIAGLAMHGRSIEAVEMFREMI-NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR 245
++++ ++G EA+ +FREM+ +Q +P +VT V V++A ++ G + G + R
Sbjct: 179 TVLSWCVVNGEYDEAIAVFREMLASQECQPDRVTLVSVVSAIAYLGALAHGLWAHAYVFR 238
Query: 246 -------------------------------DYGIEPQIEHYGCIVDLLSRVGRPEEAYD 274
+ G + ++ + ++ + G E A +
Sbjct: 239 KCIEVEEKLSSALINMYSKCGFIEGAVYVFDNVGGKRSLDTWNAMLAGFTANGYSERALE 298
Query: 275 FITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRS--ADSGTYVLLSNAY 329
T M ++ P+ I ++L+AC G ++ G + +R+ D Y + + +
Sbjct: 299 LFTRMESTRLMPNKITFNTVLNACSHGGLVEEGMKYFQRMSRFYGIEPDIAHYGCMVDLF 358
Query: 330 ASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELK 389
+G +++A +I +Q P +E + + + +LG R + ++ KK+
Sbjct: 359 CRAGMFEKAEEI--------IQTMP----MEPDASMLKALLGACRTHKNLELGKKVGH-- 404
Query: 390 QIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRV 441
++++ + V+L +I + W +L + G++ T +++ +
Sbjct: 405 RLIEAAANDHAGYVLLSNIYALDGNWGGVHKVRKLMLDRGVLKTPGSSSVEL 456
>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 616
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/491 (45%), Positives = 318/491 (64%), Gaps = 4/491 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR++HGQVLK L + +V +Y GE + A ++FD MP DVV+ MI Y
Sbjct: 127 EGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPN-RDVVSWNSMIAGY 185
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++ G +E A +VF + KD V WT+MI V+N +ALDLFREM +RP+ IV
Sbjct: 186 LKAGEIELAKKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIV 245
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNH-IVGGALINMYSRCGDIDKALQVFEEMKE 179
VLSA + LG +E G+W+H+Y+ ++I+L+ +G ALI+MYS+CG I+ A VF +
Sbjct: 246 SVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISH 305
Query: 180 R-DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
R ++ +NS+I+GLA+HG + EA+++F EM I P ++TF+G+L+ CSHGGLV+ G
Sbjct: 306 RRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQF 365
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
F+SM Y I P+I+HYGC++DL R GR E+A I NM D + ++LSA H
Sbjct: 366 YFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKH 425
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
G +++G+ A R ++ DS +YVLLSN YA +G+W + +IR M++ GV+K GCSS
Sbjct: 426 GHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSS 485
Query: 359 IEVNNEIHEFILG-DIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
+ VN ++HEF+LG ++ Q+ K+ E+ +KL+GY P VL DIED KE L
Sbjct: 486 MLVNGKVHEFLLGKELDSSYSGQVLAKIAEVVSRLKLQGYEPDLTQVLLDIEDEGKESLL 545
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
+HSE++AI +GLI I +VKNLRVC DCH +KL++ + R+II+RD+NRFHHF
Sbjct: 546 NLHSEKMAIAFGLIHINKSAPIHIVKNLRVCCDCHCFMKLVSKVYNRQIIMRDQNRFHHF 605
Query: 478 ENGTCSCGDYW 488
ENG CSC +YW
Sbjct: 606 ENGCCSCNEYW 616
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 141/318 (44%), Gaps = 45/318 (14%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECN----DVVASTVMINCYVE--HGLVENAFEVFSRVK 77
+V + KC + Q+ +M + N S ++ C + G ++ A VFSR++
Sbjct: 9 VVSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQ 68
Query: 78 VKDTVCWTAMIDGLVRNGEMARALDLFREMQR--DNVRPNEVTIVCVLSACSQLGALELG 135
++ + A+I G +L L+ M + E +I VL AC +L A + G
Sbjct: 69 HPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKLLAFDEG 128
Query: 136 RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMH 195
R +H + K + + VG +++ MY G+I+ A +VF+ M RDV ++NS+IAG
Sbjct: 129 RQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKA 188
Query: 196 GR-------------------------------SIEAVEMFREMINQGIRPTKVTFVGVL 224
G ++A+++FREM++ G+RP V VL
Sbjct: 189 GEIELAKKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVSVL 248
Query: 225 NACSHGGLVDLG--FEIFQSMTRDYGIEPQIEHYG-CIVDLLSRVGRPEEAYDFITNMKI 281
+A + G V+ G + SM + IE G ++D+ S+ G E AY ++
Sbjct: 249 SAIADLGFVEEGKWLHAYVSMNK---IELSSGFIGSALIDMYSKCGYIENAYHVFRSISH 305
Query: 282 APDHIMLGSLLSACKIHG 299
+ S++S IHG
Sbjct: 306 RRNIGDWNSMISGLAIHG 323
>gi|356518836|ref|XP_003528083.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 568
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 207/484 (42%), Positives = 310/484 (64%), Gaps = 30/484 (6%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
IH VLKLG SN + L+ YG G +++LFDEMP D+++ + +I+C+ + G
Sbjct: 115 IHTLVLKLGFHSNIYVQNALINSYGTSGSLHASLKLFDEMPR-RDLISWSSLISCFAKRG 173
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
L + A +F ++++K++ ++ P+ V ++ V+S
Sbjct: 174 LPDEALTLFQQMQLKES-----------------------------DILPDGVVMLSVIS 204
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
A S LGALELG W+H+++ + ++L +G ALI+MYSRCGDID++++VF+EM R+V T
Sbjct: 205 AVSSLGALELGIWVHAFISRIGVNLTVSLGSALIDMYSRCGDIDRSVKVFDEMPHRNVVT 264
Query: 185 YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT 244
+ +LI GLA+HGR EA+E F +M+ G++P ++ F+GVL ACSHGGLV+ G +F SM
Sbjct: 265 WTALINGLAVHGRGREALEAFYDMVESGLKPDRIAFMGVLVACSHGGLVEEGRRVFSSMW 324
Query: 245 RDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLG 304
+YGIEP +EHYGC+VDLL R G EA+DF+ M++ P+ ++ +LL AC H L L
Sbjct: 325 SEYGIEPALEHYGCMVDLLGRAGMVLEAFDFVEGMRVRPNSVIWRTLLGACVNHNLLVLA 384
Query: 305 EQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNE 364
E+ +R+ + G YVLLSNAY G W + +R M+E+ + KEPG S + ++
Sbjct: 385 EKAKERIKELDPHHDGDYVLLSNAYGGVGNWVKKEGVRNSMRESKIVKEPGLSLVHIDQV 444
Query: 365 IHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERL 424
HEF+ GD HPQ E+I + + + VKL GY+PST+ VLHDI++ EKE +L HSE+L
Sbjct: 445 AHEFVSGDNSHPQWEEITRFLGSVIDTVKLGGYTPSTKNVLHDIQEEEKEHSLGYHSEKL 504
Query: 425 AICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSC 484
A+ + L+ + TIRV+KNLR+C DCHS +K ++ R I++RDR+RFHHF G+CSC
Sbjct: 505 AVAFVLLYHRDRKTIRVIKNLRICYDCHSFMKHVSGFFDRDIVIRDRSRFHHFRKGSCSC 564
Query: 485 GDYW 488
D+W
Sbjct: 565 RDFW 568
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 15/206 (7%)
Query: 100 ALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALIN 159
AL LF M R NV + T +L + S+L IH+ + K N V ALIN
Sbjct: 82 ALALFSHMHRTNVPFDHFTFPLILKS-SKLNP----HCIHTLVLKLGFHSNIYVQNALIN 136
Query: 160 MYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM--INQGIRPTK 217
Y G + +L++F+EM RD+ +++SLI+ A G EA+ +F++M I P
Sbjct: 137 SYGTSGSLHASLKLFDEMPRRDLISWSSLISCFAKRGLPDEALTLFQQMQLKESDILPDG 196
Query: 218 VTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG---RPEEAYD 274
V + V++A S G ++LG + ++R G+ + ++D+ SR G R + +D
Sbjct: 197 VVMLSVISAVSSLGALELGIWVHAFISR-IGVNLTVSLGSALIDMYSRCGDIDRSVKVFD 255
Query: 275 FITNMKIAPDHIMLGSLLSACKIHGK 300
+ + + + +L++ +HG+
Sbjct: 256 EMPHRNV----VTWTALINGLAVHGR 277
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/489 (43%), Positives = 304/489 (62%), Gaps = 34/489 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H + G SN L++LY KCG+
Sbjct: 217 GRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQ---------------------------- 248
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
VE A +F + KD V W +I G AL LF+EM R PN+VTIV
Sbjct: 249 ----VETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVS 304
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVG--GALINMYSRCGDIDKALQVFEEMKE 179
+L AC+ LGA+++GRWIH Y+ K D+ + +LI+MY++CGDI+ A QVF M
Sbjct: 305 ILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLH 364
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+ ++++N++I G AMHGR+ ++F M GI P +TFVG+L+ACSH G +DLG I
Sbjct: 365 KSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHI 424
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F+SMT+DY I P++EHYGC++DLL G +EA + I M + PD ++ SLL AC+ HG
Sbjct: 425 FKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHG 484
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
L+L E A+ L+ + G+YVLLSN YA++G+W E ++RA + G++K PGCSSI
Sbjct: 485 NLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSI 544
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E+++E+HEFI+GD HP+ +IY ++E++ +++ G+ P T VL ++E+ KE AL
Sbjct: 545 EIDSEVHEFIVGDKLHPRNREIYGMLEEMEALLEEAGFVPDTSEVLQEMEEEWKEGALRH 604
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GLISTKP T + +VKNLRVC +CH KL++ I KR+II RDR RFHHF +
Sbjct: 605 HSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLVSKIYKREIIARDRTRFHHFRD 664
Query: 480 GTCSCGDYW 488
G CSC D+W
Sbjct: 665 GVCSCNDFW 673
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 139/457 (30%), Positives = 216/457 (47%), Gaps = 62/457 (13%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG++IHG VLKLG + L+ +Y + G +DA ++FD DVV+ T +I Y
Sbjct: 84 EGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSH-RDVVSYTALITGY 142
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G + +A E+F + VKD V W AMI G G AL+LF+EM + NVRP+E T+V
Sbjct: 143 ASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMV 202
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSAC+Q ++ELGR +HS++ H N + ALI++YS+CG ++ A +FE + +
Sbjct: 203 TVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCK 262
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG---- 236
DV ++N+LI G EA+ +F+EM+ G P VT V +L AC+H G +D+G
Sbjct: 263 DVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIH 322
Query: 237 ---------------------------------FEIFQSMTRDYGIEPQIEHYGCIVDLL 263
++F SM + + + ++
Sbjct: 323 VYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSM-----LHKSLSSWNAMIFGF 377
Query: 264 SRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG 320
+ GR +D + M+ I PD I LLSAC GKL LG I K +
Sbjct: 378 AMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPK 437
Query: 321 T--YVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQR 378
Y + + SG +KEA ++ M +E + I +L R
Sbjct: 438 LEHYGCMIDLLGHSGLFKEAKEMIKTMP------------MEPDGVIWCSLLKACRRHGN 485
Query: 379 EQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
++ + + ++K+E +P + V+L +I EW
Sbjct: 486 LELAESFA--RNLMKVEPENPGSYVLLSNIYATAGEW 520
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 151/346 (43%), Gaps = 71/346 (20%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A VF+ ++ + + W M+ G + + AL L+ M + PN T +L +C++
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
A E G+ IH ++ K + + V +LI+MY++ G ++ A +VF+ RDV +Y +L
Sbjct: 79 SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138
Query: 189 IAGLAMHG--RSI-----------------------------EAVEMFREMINQGIRPTK 217
I G A G RS EA+E+F+EM+ +RP +
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198
Query: 218 VTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFI- 276
T V VL+AC+ V+LG ++ S D+G ++ ++DL S+ G+ E A
Sbjct: 199 GTMVTVLSACAQSRSVELGRQV-HSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFE 257
Query: 277 -----------------TNMKI----------------APDHIMLGSLLSACKIHGKLQL 303
T+M + +P+ + + S+L AC G + +
Sbjct: 258 GLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDI 317
Query: 304 GE----QIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
G I K+L D +A S L+ + YA G + A Q+ M
Sbjct: 318 GRWIHVYIDKKLKDVTNAPSLRTSLI-DMYAKCGDIEAAHQVFNSM 362
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 196/488 (40%), Positives = 303/488 (62%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+EIHG ++ GL + L+++Y KC D+
Sbjct: 318 KGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDS----------------------- 354
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ VF+ + +D + W ++I G V+NG L FR+M ++P +
Sbjct: 355 ---------YRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFS 405
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
++ AC+ L L LG+ +H Y+ ++ D N + +L++MY++CG+I A Q+F+ M+ R
Sbjct: 406 SIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLR 465
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D+ ++ ++I G A+HG +++A+E+F +M +GI P V F+ VL ACSH GLVD ++ F
Sbjct: 466 DMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYF 525
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SMT D+GI P +EHY + DLL R GR EEAYDFI M I P + +LLSAC++H
Sbjct: 526 NSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKN 585
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+ + E++A R+L+ ++G Y+LL+N Y+++ +WKEA + RA ++ G++K P CS IE
Sbjct: 586 VDMAEKVANRILEVDPKNTGAYILLANIYSAARRWKEAAKWRASLRRTGIRKTPACSWIE 645
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
V N+++ F+ GD HP E+I + M+ L ++++ EGY P T V HD+E+ +K++ + H
Sbjct: 646 VRNKVYAFMAGDESHPCYEKIREAMEVLMELMEKEGYVPDTSEVHHDVEEEQKKYLVCSH 705
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLAI +G+I+T TTIRV KNLRVC DCH+ K I+ I R+I+VRD +RFHHF+NG
Sbjct: 706 SERLAIVFGIINTPAGTTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNG 765
Query: 481 TCSCGDYW 488
TCSCGDYW
Sbjct: 766 TCSCGDYW 773
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 130/252 (51%), Gaps = 7/252 (2%)
Query: 61 VEHGL-VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
+ H + V++ ++F + KD V W +I G RNG L + REM N++P+ T+
Sbjct: 244 ISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTL 303
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
VL ++ + G+ IH + +D V +LI+MY++C + + +VF + E
Sbjct: 304 SSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTE 363
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
RD ++NS+IAG +G E ++ FR+M+ I+P +F ++ AC+H + LG ++
Sbjct: 364 RDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQL 423
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+TR+ G + I +VD+ ++ G A M++ D + +++ C +HG
Sbjct: 424 HGYITRN-GFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLR-DMVSWTAMIMGCALHG 481
Query: 300 ----KLQLGEQI 307
++L EQ+
Sbjct: 482 HALDAIELFEQM 493
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 113/279 (40%), Gaps = 39/279 (13%)
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
Y L+ ++ +F+ + + W ++I +G ++L F M + P+
Sbjct: 52 YSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVF 111
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDK-------ALQ 172
VL AC+ L L LG +H Y+ + +D + G AL+NMYS+ + K A Q
Sbjct: 112 PSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQ 171
Query: 173 VFEEMKE--RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGV------- 223
V +EM E R V T + L+ GR + +E F ++ R + + +
Sbjct: 172 VLDEMTERTRSVRTASVLVGN---QGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSE 228
Query: 224 ---LNAC---------SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEE 271
+ AC SH VD +IF+ M E + + I+ +R G E
Sbjct: 229 YREMEACNLGQQIKDISHSMSVDSVRKIFEMMP-----EKDLVSWNTIIAGNARNGLYGE 283
Query: 272 AYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQI 307
+ M + PD L S+L + + G++I
Sbjct: 284 TLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEI 322
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/491 (43%), Positives = 309/491 (62%), Gaps = 5/491 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G IHG V+K GL S++ L+++YGKC + Q+FD+M DV + I
Sbjct: 269 GILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHM-DVGSCNAFIFGLS 327
Query: 62 EHGLVENAFEVFSRVKVK----DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+G VE++ +F ++K + + V WT+MI +NG AL+LFREMQ V+PN V
Sbjct: 328 RNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSV 387
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
TI C+L AC + AL G+ H + + I + VG ALI+MY++CG I + F+ +
Sbjct: 388 TIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGI 447
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
+++ +N++IAG AMHG++ EA+E+F M G +P ++F VL+ACS GL + G
Sbjct: 448 PTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGS 507
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F SM+ YGIE ++EHY C+V LLSR G+ E+AY I M + PD + G+LLS+C++
Sbjct: 508 YYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRV 567
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
H + LGE A++L + ++ G Y+LLSN YAS G W E ++R MK G++K PGCS
Sbjct: 568 HNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCS 627
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IEV N++H + GD HPQ QI +K+ +L +K GY P VL D+E+ +KE L
Sbjct: 628 WIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQIL 687
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LA+ +GL++T P ++V+KNLR+C DCH +IK I++ +R+I VRD NRFHHF
Sbjct: 688 CGHSEKLAVVFGLLNTPPGYPLQVIKNLRICGDCHVVIKFISSFERREIFVRDTNRFHHF 747
Query: 478 ENGTCSCGDYW 488
+ G CSCGDYW
Sbjct: 748 KEGACSCGDYW 758
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 174/363 (47%), Gaps = 20/363 (5%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
R++HG G S+ + LV +Y KC + +DA ++FD M E DVV+ + ++ Y
Sbjct: 133 ARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFE-PDVVSWSALVAAYA 191
Query: 62 EHGLVENAFEVFSRVK----VKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
G V+ A +FS + + + W MI G +G + A+ +F +M P+
Sbjct: 192 RQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGT 251
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
TI VL A L L +G IH Y+ K + + V ALI+MY +C + QVF++M
Sbjct: 252 TISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQM 311
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
DV + N+ I GL+ +G+ ++ +FR++ +QG+ V++ ++ CS G
Sbjct: 312 DHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEAL 371
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVG---RPEEAYDFITNMKIAPDHIMLGSLLSA 294
E+F+ M + G++P C++ + + A+ F I+ D + +L+
Sbjct: 372 ELFREM-QIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDM 430
Query: 295 CKIHGKLQLG----EQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
G++Q + I + L C +A + YA GK KEA++I M+ +G
Sbjct: 431 YAKCGRIQASRICFDGIPTKNLVCWNA-------VIAGYAMHGKAKEAMEIFDLMQRSGQ 483
Query: 351 QKE 353
+ +
Sbjct: 484 KPD 486
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 153/357 (42%), Gaps = 45/357 (12%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+ R+ H +LK GL ++ KL+ Y F DA + D +PE N
Sbjct: 31 QTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPN------------ 78
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
VFS ++ +I + + AL F +M + P+ +
Sbjct: 79 -----------VFS---------FSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLP 118
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+ AC+ L AL+ R +H D + V +L++MY +C I A +VF+ M E
Sbjct: 119 SAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEP 178
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++++L+A A G EA +F EM + G++P +++ G++ +H GL +F
Sbjct: 179 DVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMF 238
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA------YDFITNMKIAPDHIMLGSLLSA 294
M G EP I +L VG E+ + ++ + D + +L+
Sbjct: 239 LDMHLR-GFEPDGT---TISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALI-- 292
Query: 295 CKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
++GK ++++ D G+ + +G+ + ++++ ++K+ G++
Sbjct: 293 -DMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGME 348
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/487 (43%), Positives = 317/487 (65%), Gaps = 35/487 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +HG V KLGL+SN + +V LY CGE A ++FD+MP+ DV+ +MI V
Sbjct: 132 GKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQ-RDVITWNIMIARLV 190
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G E A+++F+ + ++ WT+MI G + G+ A+DLF EM+ + PNEVT+V
Sbjct: 191 KMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVA 250
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL AC+ +G L LGR IH + + + N V LI+MY +CG ++ A ++F+ M+ER
Sbjct: 251 VLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERT 310
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +++++IAGLA HGR+ +A+ +F +MIN G++P VTF+G+L+ACSH G+V+ G + F
Sbjct: 311 VVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFA 370
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SMTRDYGI P+IEHYGC+VDL SR G +EA++FI NM IAP+ ++ G+LL CK+H +
Sbjct: 371 SMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNV 430
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+L E+ + L + G YV+LSN YA +G+W++ ++R M++ G
Sbjct: 431 KLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGTW---------- 480
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
++L Q +KL+GY P+T VVL D+E+ +KE L HS
Sbjct: 481 ------------------------EKLLQRMKLKGYVPNTSVVLLDMEEDQKEKFLYRHS 516
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ +GLI T P T IR++KNLRVC DCH+ +K+I+ ++ R+I+VRDRNRFH F+NG+
Sbjct: 517 EKLAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRFHCFKNGS 576
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 577 CSCGDYW 583
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 95/217 (43%), Gaps = 13/217 (5%)
Query: 138 IHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR 197
+H+++ K L+ + + ++ + A +F+ + +VT +N+ + A
Sbjct: 34 LHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEGDS 93
Query: 198 SIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL-GFEIFQSMTRDYGIEPQIEHY 256
+A+ +F + I P T VL ACS L+D+ +I G++ +
Sbjct: 94 PADAISLFYRLREFDISPDHYTCSFVLKACSR--LLDVRNGKIVHGYVEKLGLQSNMFLQ 151
Query: 257 GCIVDLLS---RVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
IV L + +G + +D + + +IM+ L+ G +L ++ +R +
Sbjct: 152 NMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPER--N 209
Query: 314 CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
RS S + YA GK KEA+ + +M++AG+
Sbjct: 210 VRSWTS-----MIGGYAQCGKSKEAIDLFLEMEDAGL 241
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/486 (44%), Positives = 318/486 (65%), Gaps = 7/486 (1%)
Query: 8 QVLKLGLRSNRSTRLKLVEL---YGKC--GEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
++L++GL+ + + +K++ G C GE+ D + + +V +T +++ YV+
Sbjct: 205 KLLEMGLKPDSFSLVKVLAACARLGDCTSGEWID--RYISDSGMGRNVFVATSLLDMYVK 262
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
G +E A +FS + KD V W+ MI G NG +ALDLF +MQ +N++P+ T+V V
Sbjct: 263 CGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGV 322
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
LSAC+ LGAL+LG W S M ++ N ++G ALI+MYS+CG + +A ++F MK++D
Sbjct: 323 LSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDR 382
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
+N+++ GL+M+G + +F + GIRP + TF+G+L C+HGG V+ G + F +
Sbjct: 383 VVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNN 442
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
M R + + P IEHYGC+VDLL R G EA+ I NM + P+ ++ G+LL CK+H
Sbjct: 443 MKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTH 502
Query: 303 LGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVN 362
L EQ+ K+L++ +SG YV LSN Y+ + +W+EA +IR+ MKE +QK CS IE++
Sbjct: 503 LAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEID 562
Query: 363 NEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSE 422
+HEF++GD H E+IY K+ EL + +K G+ P+TE VL DIE+ EKE L HSE
Sbjct: 563 GIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSE 622
Query: 423 RLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTC 482
+LA+ +GLI++ P IRVVKNLRVC DCH IKLI+ ITKR+II+RD NRFH F +G+C
Sbjct: 623 KLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSC 682
Query: 483 SCGDYW 488
SC DYW
Sbjct: 683 SCRDYW 688
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 145/252 (57%), Gaps = 2/252 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+DV T +++ YV+ ++A +VF + K+ V WTA+I G + +G A+ F+++
Sbjct: 147 HDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKL 206
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
++P+ ++V VL+AC++LG G WI Y+ + N V +L++MY +CG++
Sbjct: 207 LEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNL 266
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
++A +F M E+D+ +++++I G A +G +A+++F +M ++ ++P T VGVL+AC
Sbjct: 267 ERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSAC 326
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
+ G +DLG M R+ + + ++D+ S+ G +A++ T MK D ++
Sbjct: 327 ATLGALDLGIWASSLMDRNEFLSNPVLGTA-LIDMYSKCGSVTQAWEIFTAMK-KKDRVV 384
Query: 288 LGSLLSACKIHG 299
+++ ++G
Sbjct: 385 WNAMMVGLSMNG 396
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 153/335 (45%), Gaps = 48/335 (14%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
+++ C ++ G + VFS+VK + W MI GLV A+ L+ M+
Sbjct: 52 NLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFL 111
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
PN TI VL AC++ + LG IHS + K D + V +L+++Y +C + D AL+V
Sbjct: 112 PNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKV 171
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG-- 231
F+++ +++V ++ ++I G G EA+ F++++ G++P + V VL AC+ G
Sbjct: 172 FDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDC 231
Query: 232 ------------------------LVDLGFE---------IFQSMTRDYGIEPQIEHYGC 258
L+D+ + IF +M E I +
Sbjct: 232 TSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMP-----EKDIVSWST 286
Query: 259 IVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR 315
++ + G P++A D M+ + PD + +LSAC G L LG A L+D R
Sbjct: 287 MIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIW-ASSLMD-R 344
Query: 316 SADSGTYVL---LSNAYASSGKWKEAVQIRAKMKE 347
+ VL L + Y+ G +A +I MK+
Sbjct: 345 NEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKK 379
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 96/249 (38%), Gaps = 38/249 (15%)
Query: 138 IHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR 197
IH+ + + +D ++ + ++ G + + VF ++KE ++ +N++I GL
Sbjct: 35 IHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDC 94
Query: 198 SIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR---DYGI----- 249
+A+ ++ M G P T VL AC+ V LG +I + + D+ +
Sbjct: 95 FDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTS 154
Query: 250 ----------------------EPQIEHYGCIVDLLSRVGRPEE---AYDFITNMKIAPD 284
+ + + I+ G E A+ + M + PD
Sbjct: 155 LLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPD 214
Query: 285 HIMLGSLLSACKIHGKLQLGEQIAKRLLDC---RSADSGTYVLLSNAYASSGKWKEAVQI 341
L +L+AC G GE I + + D R+ T +L + Y G + A I
Sbjct: 215 SFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLL--DMYVKCGNLERANLI 272
Query: 342 RAKMKEAGV 350
+ M E +
Sbjct: 273 FSAMPEKDI 281
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/490 (44%), Positives = 316/490 (64%), Gaps = 27/490 (5%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVA----STVMI 57
G+EIHG VLK GL + L+ +YG+C + A +FD+M E DVV+ +T ++
Sbjct: 178 GKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMME-RDVVSWIPTTTALL 236
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y + G + A ++F+ + K V WTAMI G +R+ + LF MQ +N+ PNE+
Sbjct: 237 DMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEI 296
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T+ + K R++++ I+ AL++MY++CGDI+ A ++F E
Sbjct: 297 TM----------------------LNKERVEVDCILNTALVDMYAKCGDINAAGRLFIEA 334
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
RD+ +N++I G AMHG EA+++F EM QG++P +TF+G+L+ACSH GLV G
Sbjct: 335 ISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGK 394
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
++F+ M +G+ PQIEHYGC+VDLL R G +EA++ I +M I P+ I+ G+L++AC++
Sbjct: 395 KLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRL 454
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
H QLGE A +LL+ + G VL+SN YA++ +W +A +R MK G++KEPG S
Sbjct: 455 HKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHS 514
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IEVN +HEF++GD HPQ +I + + E+++ + GY P T VL +I++ EKE AL
Sbjct: 515 VIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETAL 574
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LA+ +GLIST P T IR+VKNLRVCNDCH+ KL++ I R IIVRDRNRFHHF
Sbjct: 575 TYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHF 634
Query: 478 ENGTCSCGDY 487
G CSCGDY
Sbjct: 635 REGYCSCGDY 644
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 118/281 (41%), Gaps = 58/281 (20%)
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W +I + + AL+++ ++++ + + VL AC Q+ +LG+ IH ++
Sbjct: 127 WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 186
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD---------------------- 181
K +D + VG AL+ MY C ++ A VF++M ERD
Sbjct: 187 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHLG 246
Query: 182 -------------VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGV----L 224
V ++ ++IAG R E ++F M + I P ++T + +
Sbjct: 247 LARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLNKERVEV 306
Query: 225 NACSHGGLVDL----------GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYD 274
+ + LVD+ G ++++RD I + I+ + G EEA D
Sbjct: 307 DCILNTALVDMYAKCGDINAAGRLFIEAISRD------ICMWNAIITGFAMHGYGEEALD 360
Query: 275 FITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
M+ + P+ I LL AC G + G+++ ++++
Sbjct: 361 IFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMV 401
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/524 (41%), Positives = 311/524 (59%), Gaps = 38/524 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++H ++K+GL +N LV +YGKCG ++A ++ D+MP DVV+ M+ Y
Sbjct: 156 GLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPY-RDVVSWNSMVAGYA 214
Query: 62 EHGLVENAFEV-------------------------------------FSRVKVKDTVCW 84
+ G ++A E+ F R+ K+ + W
Sbjct: 215 QSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISW 274
Query: 85 TAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGK 144
MI V N A+ LF +M+ ++P+ VTI +L AC L AL LGR +H Y+ K
Sbjct: 275 NVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEK 334
Query: 145 HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEM 204
+ N ++ AL++MY++CG +++A VF++M+ RDV ++ S+++ G+ +AV +
Sbjct: 335 GNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVAL 394
Query: 205 FREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLS 264
F +M++ G P + FV VL+ACSH GL+D G F+ MT YGI P+IEH+ C+VDL
Sbjct: 395 FAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFG 454
Query: 265 RVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVL 324
R G EEAY FI M + P+ + G+LLSAC++H K+ +G A L SG YVL
Sbjct: 455 RAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVL 514
Query: 325 LSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKK 384
LSN YA +G WK+ + +R MK+ G++K PG S++E+N ++H F+ GD HPQ + IY +
Sbjct: 515 LSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGE 574
Query: 385 MQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKN 444
+ L +K GY P TE LHD+E +KE LAIHSE+LAI + +++TK T IR+ KN
Sbjct: 575 LDVLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKN 634
Query: 445 LRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
LRVC DCH IKLI+ I R IIVRD NRFHHF NG CSCGDYW
Sbjct: 635 LRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 142/307 (46%), Gaps = 17/307 (5%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D + ++ Y G A +F R K+ V + MI V N AL +F+ M
Sbjct: 70 DPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVML 129
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
P+ T CVL ACS L L +G +H + K +D N +G AL+ MY +CG +
Sbjct: 130 SCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLR 189
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+A +V ++M RDV ++NS++AG A G+ +A+E+ +EM + + T +
Sbjct: 190 EARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVC 249
Query: 229 HGGLVDLGF--EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAP 283
+ L ++ + +F+ MT+ I + ++ + P EA M+ + P
Sbjct: 250 YTSLENVQYIHNMFERMTKKNLIS-----WNVMIAIYVNNSMPNEAVSLFLQMEECGMKP 304
Query: 284 DHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNA----YASSGKWKEAV 339
D + + SLL AC L LG ++ K + + +LL NA YA G +EA
Sbjct: 305 DAVTIASLLPACGDLSALFLGRRLHKYI---EKGNLQPNLLLENALLDMYAKCGCLEEAR 361
Query: 340 QIRAKMK 346
+ KM+
Sbjct: 362 DVFDKMR 368
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/486 (44%), Positives = 317/486 (65%), Gaps = 7/486 (1%)
Query: 8 QVLKLGLRSNRSTRLKLVEL---YGKC--GEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
++L++GL+ + + +K++ G C GE+ D + + +V +T +++ YV+
Sbjct: 205 KLLEMGLKPDSFSLVKVLAACARLGDCTSGEWID--RYISDSGMGRNVFVATSLLDMYVK 262
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
G +E A +FS + KD V W+ MI G NG +ALDLF +MQ +N++P+ T+V V
Sbjct: 263 CGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGV 322
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
LSAC+ LGAL+LG W S M ++ N ++G ALI+MYS+CG + +A ++F MK +D
Sbjct: 323 LSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDR 382
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
+N+++ GL+M+G + +F + GIRP + TF+G+L C+HGG V+ G + F +
Sbjct: 383 VVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNN 442
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
M R + + P IEHYGC+VDLL R G EA+ I NM + P+ ++ G+LL CK+H
Sbjct: 443 MKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTH 502
Query: 303 LGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVN 362
L EQ+ K+L++ +SG YV LSN Y+ + +W+EA +IR+ MKE +QK CS IE++
Sbjct: 503 LAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEID 562
Query: 363 NEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSE 422
+HEF++GD H E+IY K+ EL + +K G+ P+TE VL DIE+ EKE L HSE
Sbjct: 563 GIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSE 622
Query: 423 RLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTC 482
+LA+ +GLI++ P IRVVKNLRVC DCH IKLI+ ITKR+II+RD NRFH F +G+C
Sbjct: 623 KLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSC 682
Query: 483 SCGDYW 488
SC DYW
Sbjct: 683 SCRDYW 688
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 145/252 (57%), Gaps = 2/252 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+DV T +++ YV+ ++A +VF + K+ V WTA+I G + +G A+ F+++
Sbjct: 147 HDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKL 206
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
++P+ ++V VL+AC++LG G WI Y+ + N V +L++MY +CG++
Sbjct: 207 LEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNL 266
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
++A +F M E+D+ +++++I G A +G +A+++F +M ++ ++P T VGVL+AC
Sbjct: 267 ERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSAC 326
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
+ G +DLG M R+ + + ++D+ S+ G +A++ T MK D ++
Sbjct: 327 ATLGALDLGIWASSLMDRNEFLSNPVLGTA-LIDMYSKCGSVTQAWEIFTAMK-RKDRVV 384
Query: 288 LGSLLSACKIHG 299
+++ ++G
Sbjct: 385 WNAMMVGLSMNG 396
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 152/334 (45%), Gaps = 48/334 (14%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
+++ C ++ G + VFS+VK + W MI GLV A+ L+ M+
Sbjct: 52 NLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFL 111
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
PN TI VL AC++ + LG IHS + K D + V +L+++Y +C + D AL+V
Sbjct: 112 PNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKV 171
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG-- 231
F+++ +++V ++ ++I G G EA+ F++++ G++P + V VL AC+ G
Sbjct: 172 FDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDC 231
Query: 232 ------------------------LVDLGFE---------IFQSMTRDYGIEPQIEHYGC 258
L+D+ + IF +M E I +
Sbjct: 232 TSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMP-----EKDIVSWST 286
Query: 259 IVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR 315
++ + G P++A D M+ + PD + +LSAC G L LG A L+D R
Sbjct: 287 MIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIW-ASSLMD-R 344
Query: 316 SADSGTYVL---LSNAYASSGKWKEAVQIRAKMK 346
+ VL L + Y+ G +A +I MK
Sbjct: 345 NEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMK 378
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 96/249 (38%), Gaps = 38/249 (15%)
Query: 138 IHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR 197
IH+ + + +D ++ + ++ G + + VF ++KE ++ +N++I GL
Sbjct: 35 IHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDC 94
Query: 198 SIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR---DYGI----- 249
+A+ ++ M G P T VL AC+ V LG +I + + D+ +
Sbjct: 95 FDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTS 154
Query: 250 ----------------------EPQIEHYGCIVDLLSRVGRPEE---AYDFITNMKIAPD 284
+ + + I+ G E A+ + M + PD
Sbjct: 155 LLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPD 214
Query: 285 HIMLGSLLSACKIHGKLQLGEQIAKRLLDC---RSADSGTYVLLSNAYASSGKWKEAVQI 341
L +L+AC G GE I + + D R+ T +L + Y G + A I
Sbjct: 215 SFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLL--DMYVKCGNLERANLI 272
Query: 342 RAKMKEAGV 350
+ M E +
Sbjct: 273 FSAMPEKDI 281
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 204/433 (47%), Positives = 297/433 (68%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+++ Y G + +A++VF + +D V W ++I+G NG AL L+REM + V P+
Sbjct: 177 LVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPD 236
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
T+V +LSAC +LGAL LG +H YM K + N AL+++YS+CG+ A +VF+
Sbjct: 237 GFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFD 296
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
EM+ER V ++ SLI GLA++G EA+++F E+ QG++P+++TFVGVL ACSH G++D
Sbjct: 297 EMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDE 356
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
GF F+ M +YGI P+IEH+GC+VDLL R G+ +AYD+I NM + P+ ++ +LL AC
Sbjct: 357 GFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGAC 416
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
IHG L+LGE + SG +VLLSN YAS +W + +R M GV+K PG
Sbjct: 417 TIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKTPG 476
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
S +E+ N ++EFI+GD HPQ E+ Y + ++ Q++K+EGY P T VL DIE+ EKE
Sbjct: 477 YSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLADIEEEEKET 536
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
AL+ H+E++AI + L++T P T IR++KNLRVC DCH IKLI+ + +R+IIVRDR+RFH
Sbjct: 537 ALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFEREIIVRDRSRFH 596
Query: 476 HFENGTCSCGDYW 488
HF++G+CSC DYW
Sbjct: 597 HFKDGSCSCKDYW 609
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 110/213 (51%), Gaps = 2/213 (0%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR-DNVRPNEVTIVCVLSACS 127
A ++F++++ + W MI G + + A++LF +M ++ P+ T + A +
Sbjct: 88 AAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVA 147
Query: 128 QLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNS 187
+L + LG IHS + ++ D V +L++MYS G + A QVFE M RD +NS
Sbjct: 148 KLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNS 207
Query: 188 LIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDY 247
+I G A++G EA+ ++REM ++G+ P T V +L+AC G + LG + M +
Sbjct: 208 VINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVK-V 266
Query: 248 GIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
G+ ++DL S+ G +A M+
Sbjct: 267 GLVQNQHASNALLDLYSKCGNFRDAQKVFDEME 299
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 42/201 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H ++K+GL N+ L++LY KCG F+DA ++FDEM E
Sbjct: 256 GERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEE--------------- 300
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ V WT++I GL NG AL LF E++R ++P+E+T V
Sbjct: 301 -----------------RSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVG 343
Query: 122 VLSACSQLGALELG-----RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
VL ACS G L+ G R Y RI+ + G ++++ R G + A
Sbjct: 344 VLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHH----GCMVDLLCRAGKVGDAYDYIRN 399
Query: 177 MK-ERDVTTYNSLIAGLAMHG 196
M + + +L+ +HG
Sbjct: 400 MPVPPNAVIWRTLLGACTIHG 420
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/491 (42%), Positives = 318/491 (64%), Gaps = 5/491 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++HG V+K GL S++ ++++YGKCG K+ ++FDE+ E ++ + +
Sbjct: 259 GAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEM-EIGSLNAFLTGLS 317
Query: 62 EHGLVENAFEVFSRVKVK----DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+G+V+ A EVF++ K + + V WT++I +NG+ AL+LFR+MQ V PN V
Sbjct: 318 RNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAV 377
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
TI ++ AC + AL G+ IH + + I + VG ALI+MY++CG I A + F++M
Sbjct: 378 TIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKM 437
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
++ ++N+++ G AMHG++ E +EMF M+ G +P VTF VL+AC+ GL + G+
Sbjct: 438 SALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGW 497
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
+ SM+ ++GIEP++EHY C+V LLSRVG+ EEAY I M PD + G+LLS+C++
Sbjct: 498 RCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRV 557
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
H L LGE A++L + G Y+LLSN YAS G W E +IR MK G++K PG S
Sbjct: 558 HNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKNPGYS 617
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IEV +++H + GD HPQ + I +K+ +L +K GY P T VL D+E+ +KE L
Sbjct: 618 WIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKSGYLPKTNFVLQDVEEQDKEQIL 677
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LA+ GL++T P ++V+KNLR+C+DCH++IK+I+ + R+I VRD NRFHHF
Sbjct: 678 CGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEGREIYVRDTNRFHHF 737
Query: 478 ENGTCSCGDYW 488
++G CSCGD+W
Sbjct: 738 KDGVCSCGDFW 748
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 177/360 (49%), Gaps = 14/360 (3%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H G ++ L +Y KC DA +LFD MP+ DVV + MI Y
Sbjct: 123 GQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPD-RDVVVWSAMIAGYS 181
Query: 62 EHGLVENAFEVFSRVKV----KDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
GLVE A E+F ++ + V W M+ G NG A+ +FR M P+
Sbjct: 182 RLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGS 241
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T+ CVL A L + +G +H Y+ K + + V A+++MY +CG + + +VF+E+
Sbjct: 242 TVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEV 301
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
+E ++ + N+ + GL+ +G A+E+F + +Q + VT+ ++ +CS G
Sbjct: 302 EEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEAL 361
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDL---LSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
E+F+ M + YG+EP ++ +S + +E + F I D + +L+
Sbjct: 362 ELFRDM-QAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDM 420
Query: 295 CKIHGKLQLGEQIAKRLLDCRSA-DSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
G++QL A+R D SA + ++ + YA GK KE +++ M ++G + +
Sbjct: 421 YAKCGRIQL----ARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPD 476
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 145/350 (41%), Gaps = 36/350 (10%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+ R+ H +L+L L S+ L+ Y N + ST ++
Sbjct: 18 QARQAHALILRLNLFSDTQLTTSLLSFYA------------------NALSLSTPQLSLT 59
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ L FS ++I R+ L F + + P+ +
Sbjct: 60 LSSHLPHPTLFSFS-----------SLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLP 108
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+ +C+ L AL+ G+ +H++ + IV +L +MY +C I A ++F+ M +R
Sbjct: 109 SAIKSCASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDR 168
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++++IAG + G EA E+F EM + G+ P V++ G+L + G D +F
Sbjct: 169 DVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMF 228
Query: 241 QSMTRDYGIEPQIEHYGCI---VDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
+ M G P C+ V L V + + ++ + D ++ ++L +
Sbjct: 229 RMMLVQ-GFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLD---M 284
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+GK +++++ + + G+ + +G A+++ K K+
Sbjct: 285 YGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKD 334
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/524 (41%), Positives = 311/524 (59%), Gaps = 38/524 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++H ++K+GL +N LV +YGKCG ++A ++ D+MP DVV+ M+ Y
Sbjct: 156 GLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPY-RDVVSWNSMVAGYA 214
Query: 62 EHGLVENAFEV-------------------------------------FSRVKVKDTVCW 84
+ G ++A E+ F R+ K+ + W
Sbjct: 215 QSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISW 274
Query: 85 TAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGK 144
MI V N A+ LF +M+ ++P+ VTI +L AC L AL LGR +H Y+ K
Sbjct: 275 NVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEK 334
Query: 145 HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEM 204
+ N ++ AL++MY++CG +++A VF++M+ RDV ++ S+++ G+ +AV +
Sbjct: 335 GNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVAL 394
Query: 205 FREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLS 264
F +M++ G P + FV VL+ACSH GL+D G F+ MT YGI P+IEH+ C+VDL
Sbjct: 395 FAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFG 454
Query: 265 RVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVL 324
R G EEAY FI M + P+ + G+LLSAC++H K+ +G A L SG YVL
Sbjct: 455 RAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVL 514
Query: 325 LSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKK 384
LSN YA +G WK+ + +R MK+ G++K PG S++E+N ++H F+ GD HPQ + IY +
Sbjct: 515 LSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGE 574
Query: 385 MQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKN 444
+ L +K GY P TE LHD+E +KE LAIHSE+LAI + +++TK T IR+ KN
Sbjct: 575 LDVLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKN 634
Query: 445 LRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
LRVC DCH IKLI+ I R IIVRD NRFHHF NG CSCGDYW
Sbjct: 635 LRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 142/307 (46%), Gaps = 17/307 (5%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D + ++ Y G A +F R K+ V + MI V N AL +F+ M
Sbjct: 70 DPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVML 129
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
P+ T CVL ACS L L +G +H + K +D N +G AL+ MY +CG +
Sbjct: 130 SCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLR 189
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+A +V ++M RDV ++NS++AG A G+ +A+E+ +EM + + T +
Sbjct: 190 EARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVC 249
Query: 229 HGGLVDLGF--EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAP 283
+ L ++ + +F+ MT+ I + ++ + P EA M+ + P
Sbjct: 250 YTSLENVQYIHNMFERMTKKNLIS-----WNVMIAIYVNNSMPNEAVSLFLQMEECGMKP 304
Query: 284 DHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNA----YASSGKWKEAV 339
D + + SLL AC L LG ++ K + + +LL NA YA G +EA
Sbjct: 305 DAVTIASLLPACGDLSALFLGRRLHKYI---EKGNLRPNLLLENALLDMYAKCGCLEEAR 361
Query: 340 QIRAKMK 346
+ KM+
Sbjct: 362 DVFDKMR 368
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/487 (42%), Positives = 302/487 (62%), Gaps = 33/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ + +++ G S+ R LV ++ CG+ AM LF++MPE
Sbjct: 527 GKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPE--------------- 571
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+D V W +I G V++GE A D F+ MQ V+P+++T
Sbjct: 572 -----------------RDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTG 614
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+AC+ AL GR +H+ + + +D + +VG LI+MY++CG ID A VF + +++
Sbjct: 615 LLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKN 674
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ S+I G A HGR EA+E+F +M +G++P +TFVG L+AC+H GL+ G F+
Sbjct: 675 VYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFE 734
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM +D+ IEP++EHYGC+VDL R G EA +FI M++ PD + G+LL AC++H +
Sbjct: 735 SM-KDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDV 793
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+L E++A++ L+ D G YV+LSN YA++G WKE ++R M + GV K+PG S IEV
Sbjct: 794 ELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEV 853
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ +H F D HPQ E+I+ ++ L +K GY P T VLHD+ED EKE AL HS
Sbjct: 854 DGRVHIFCSDDKTHPQIEEIHAELGRLHMEMKKLGYVPDTRYVLHDVEDSEKEHALCHHS 913
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ERLAI YGL+ T P T I + KNLRVC DCH+ KLI+ ITKR+II RD NRFHHF++G
Sbjct: 914 ERLAIAYGLLKTPPLTPIVISKNLRVCGDCHTATKLISKITKRQIIARDSNRFHHFKDGV 973
Query: 482 CSCGDYW 488
CSCGD+W
Sbjct: 974 CSCGDFW 980
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 189/355 (53%), Gaps = 17/355 (4%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPEC---NDVVASTVMI 57
E +H Q+++ G++ ++ T + ++ +LF + D+ T +I
Sbjct: 188 EAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALI 247
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
N +++ G V++A +VF+ + +D + WT+MI GL R+ + +A +LF+ M+ + V+P++V
Sbjct: 248 NMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKV 307
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
V +L AC+ ALE G+ +H+ M + +D VG AL++MY++CG ++ AL+VF +
Sbjct: 308 AFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLV 367
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
K R+V ++ ++IAG A HGR EA F +MI GI P +VTF+ +L ACS + G
Sbjct: 368 KGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGR 427
Query: 238 EIFQSMTR-DYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLS 293
+I + + Y + ++ ++ + ++ G +A ++ I+ + + M+ + +
Sbjct: 428 QIHDRIIKAGYITDDRVR--TALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQ 485
Query: 294 ACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASS-----GKWKEAVQIRA 343
K + + + K + DS T+ + N S GKW +++ IRA
Sbjct: 486 HEKYDNAVATFQALLKEGI---KPDSSTFTSILNVCKSPDALELGKWVQSLIIRA 537
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 171/388 (44%), Gaps = 82/388 (21%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR+IH +++K G ++ R L+ +Y KCG DA
Sbjct: 425 QGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARN--------------------- 463
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
VF R+ ++ V W AMI V++ + A+ F+ + ++ ++P+ T
Sbjct: 464 -----------VFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFT 512
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L+ C ALELG+W+ S + + + + + AL++M+ CGD+ A+ +F +M ER
Sbjct: 513 SILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPER 572
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG---------- 230
D+ ++N++IAG HG + A + F+ M G++P ++TF G+LNAC+
Sbjct: 573 DLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLH 632
Query: 231 -------------------------GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSR 265
G +D +F ++ + + + ++ ++
Sbjct: 633 ALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKK-----NVYSWTSMITGYAQ 687
Query: 266 VGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLG----EQIAKRLLDCRSAD 318
GR +EA + M+ + PD I LSAC G ++ G E + ++ R
Sbjct: 688 HGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMKDFNIEPRMEH 747
Query: 319 SGTYVLLSNAYASSGKWKEAVQIRAKMK 346
G V L + +G EAV+ KM+
Sbjct: 748 YGCMVDL---FGRAGLLHEAVEFINKMQ 772
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 171/385 (44%), Gaps = 68/385 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G IH + ++ + L+ +Y KCG A Q+FDEMP+ DV + +++ Y
Sbjct: 122 DGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPD-KDVYSWNLLLGGY 180
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V+H E AF L +M +D V+P++ T V
Sbjct: 181 VQHRRYEEAFR-------------------------------LHEQMVQDGVKPDKYTFV 209
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L+AC+ ++ G + S + D + VG ALINM+ +CG +D AL+VF + R
Sbjct: 210 YMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRR 269
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D+ T+ S+I GLA H + +A +F+ M +G++P KV FV +L AC+H ++ G +
Sbjct: 270 DLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVH 329
Query: 241 QSMTRDYGIEPQIE-------------------------------HYGCIVDLLSRVGRP 269
M ++ G++ +I + ++ ++ GR
Sbjct: 330 ARM-KEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRM 388
Query: 270 EEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRS-ADSGTYVLL 325
EEA+ F M I P+ + S+L AC L+ G QI R++ D L
Sbjct: 389 EEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTAL 448
Query: 326 SNAYASSGKWKEAVQIRAKMKEAGV 350
+ YA G +A + ++ + V
Sbjct: 449 LSMYAKCGSLMDARNVFERISKQNV 473
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 141/279 (50%), Gaps = 3/279 (1%)
Query: 76 VKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELG 135
V +K+T A ++ L + G+++ A+ + + +++ + T +L C + L G
Sbjct: 64 VDIKNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDG 123
Query: 136 RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMH 195
IH+++ +I + + LI+MY++CG+ + A Q+F+EM ++DV ++N L+ G H
Sbjct: 124 ERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQH 183
Query: 196 GRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEH 255
R EA + +M+ G++P K TFV +LNAC+ VD G E+F S+ + G + +
Sbjct: 184 RRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELF-SLILNAGWDTDLFV 242
Query: 256 YGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL-LDC 314
++++ + G ++A N+ D I S+++ H + + + + + +
Sbjct: 243 GTALINMHIKCGGVDDALKVFNNLP-RRDLITWTSMITGLARHRQFKQACNLFQVMEEEG 301
Query: 315 RSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
D +V L A ++ ++ A+MKE G+ E
Sbjct: 302 VQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTE 340
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 33/196 (16%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR +H + + L + L+ +Y KCG DA +F +P+ N V + T MI Y
Sbjct: 627 EGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKN-VYSWTSMITGY 685
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+HG R E AL+LF +MQ++ V+P+ +T V
Sbjct: 686 AQHG----------------------------RGKE---ALELFCQMQQEGVKPDWITFV 714
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
LSAC+ G ++ G M I+ G +++++ R G + +A++ +M+ +
Sbjct: 715 GALSACAHAGLIKEGLHHFESMKDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVK 774
Query: 181 -DVTTYNSLIAGLAMH 195
D + +L+ +H
Sbjct: 775 PDSRLWGALLGACQVH 790
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/487 (43%), Positives = 308/487 (63%), Gaps = 1/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ HG VL+ GL + ++ +Y KCG+ + A ++FD M V+ +I +V
Sbjct: 360 GKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLN-KTRVSWNSLIAGFV 418
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+G +E+A+++FS + D V W MI LV+ A++LFR MQ + + ++VT+V
Sbjct: 419 RNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVG 478
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V SAC LGAL+L +WIH Y+ K I + +G AL++M++RCGD A+QVF +M +RD
Sbjct: 479 VASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRD 538
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V+ + + I +AM G A+E+F EM+ QGI+P V FV +L A SHGGLV+ G+ IF+
Sbjct: 539 VSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFR 598
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM YGI PQ HYGC+VDLL R G EA I +M++ P+ ++ GSLL+AC++H +
Sbjct: 599 SMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNV 658
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+ A+R+ + +G +VLLSN YAS+G+W + ++R +KE G K PG SSIE+
Sbjct: 659 DIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIEI 718
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N +I EF GD HP+ I ++E+ ++ GY P VL D+ + EKE+ L+ HS
Sbjct: 719 NGKIFEFTTGDESHPEMTHIEPMLKEICCRLRDIGYVPDLTNVLLDVNEKEKEYLLSRHS 778
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI + LIST IRV KNLR+C+DCHS KL++ R+IIVRD NRFH F+ G
Sbjct: 779 EKLAIAFALISTGQGMPIRVAKNLRICSDCHSFAKLVSKSYSREIIVRDNNRFHFFQQGF 838
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 839 CSCGDYW 845
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 173/353 (49%), Gaps = 37/353 (10%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG ++HG ++K+G + L+ YG+CGE D M+
Sbjct: 157 EGFQVHGAIVKMGFERDMFVENSLIHFYGECGEI-DCMR--------------------- 194
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
VF ++ ++ V WT++I G + G A+ LF EM +RPN VT+V
Sbjct: 195 ----------RVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMV 244
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+SAC++L L+LG + + +G+ +++N ++ AL++MY +CG IDKA ++F+E ++
Sbjct: 245 GVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDK 304
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
++ YN++++ G + E + + EM+ G RP ++T + ++ACS V G
Sbjct: 305 NLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCH 364
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ R+ G+E I+++ + G+ E A M + + SL++ +G
Sbjct: 365 GYVLRN-GLEGWDNVCNAIINMYMKCGKQEMACRVFDRM-LNKTRVSWNSLIAGFVRNGD 422
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
++ +I + D +D ++ + A +KEA+++ M+ G+ +
Sbjct: 423 MESAWKIFSAMPD---SDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITAD 472
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 162/380 (42%), Gaps = 70/380 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++ + +L L N LV++Y KCG A ++FDE + N V+ +T+M N YV
Sbjct: 259 GEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSN-YV 317
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
GL V EM + RP+ +T++
Sbjct: 318 RQGLAREVLAVLG-------------------------------EMLKHGPRPDRITMLS 346
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC----------------- 164
+SACS+L + G+W H Y+ ++ ++ V A+INMY +C
Sbjct: 347 AVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKT 406
Query: 165 --------------GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
GD++ A ++F M + D+ ++N++I L EA+E+FR M +
Sbjct: 407 RVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQS 466
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
+GI KVT VGV +AC + G +DL I + I + +VD+ +R G P+
Sbjct: 467 EGITADKVTMVGVASACGYLGALDLAKWI-HGYIKKKDIHFDMHLGTALVDMFARCGDPQ 525
Query: 271 EAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSN 327
A M ++ +G++ G ++L +++ ++ + D +V L
Sbjct: 526 SAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGI---KPDGVVFVALLT 582
Query: 328 AYASSGKWKEAVQIRAKMKE 347
A + G ++ I MK+
Sbjct: 583 ALSHGGLVEQGWHIFRSMKD 602
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 116/239 (48%), Gaps = 24/239 (10%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
E +++H Q+ K GL + L L L C E M F+ + + +
Sbjct: 48 ELKQLHSQITKNGLNHHP---LSLTNLISSCTE----MGTFESLEYAQKA------LELF 94
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+E + +FS ++I G G +A+ +FR++ P+ T
Sbjct: 95 IEDNGIMGTHYMFS-----------SLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFP 143
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSAC++ AL G +H + K + + V +LI+ Y CG+ID +VF++M ER
Sbjct: 144 FVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSER 203
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+V ++ SLI G A G EAV +F EM+ GIRP VT VGV++AC+ + LG ++
Sbjct: 204 NVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQV 262
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/483 (43%), Positives = 309/483 (63%), Gaps = 34/483 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+IH + G SN L++LY KCGE + A
Sbjct: 229 GRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERA------------------------ 264
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HGL F ++ KD + W +I G AL +F+EM + PN+VT++
Sbjct: 265 -HGL-------FEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLS 316
Query: 122 VLSACSQLGALELGRWIHSYMGKHR--IDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+L AC+ LGA+++GRWIH Y+ K I N + +LI+MY++CG+I+ A QVF+ +
Sbjct: 317 ILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILN 376
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+ +++ N++I G AMHGR+ A ++ M GI P +TFVG+L+ACSH GL DLG +I
Sbjct: 377 KSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKI 436
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F+SMT DY IEP++EHYGC++DLL R G +EA + I +M + PD ++ GSLL ACKIH
Sbjct: 437 FKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHK 496
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
L+LGE IA++L+ + G+YVLLSN YA+S +W + ++R + + G++K PGCSSI
Sbjct: 497 NLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSI 556
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E+++ +HEF++GD HPQ ++IYK ++E+ ++ G+ T VL ++E+ KE AL+
Sbjct: 557 EIDSMVHEFLIGDKFHPQNKEIYKMLEEIDSLLAETGFVSDTSEVLQEMEEELKEGALSY 616
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GLISTKP T +R+VKNLRVC +CH KLI+ I KR+II RDR+RFHHF++
Sbjct: 617 HSEKLAIAFGLISTKPGTKLRIVKNLRVCRNCHEATKLISKIYKREIIARDRSRFHHFKD 676
Query: 480 GTC 482
G C
Sbjct: 677 GMC 679
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 141/457 (30%), Positives = 221/457 (48%), Gaps = 62/457 (13%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG++IH Q+LK GL + L+ +Y + G +DA ++FD DVV+ T MI Y
Sbjct: 96 EGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSH-RDVVSYTAMITGY 154
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G ++ A ++F + +KD V W AMI G G AL+LF EM + +V+P+E T+
Sbjct: 155 ASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMA 214
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLS C+ G +ELGR IHS++ H N + ALI++YS+CG++++A +FE ++ +
Sbjct: 215 TVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYK 274
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++N+LI G A EA+ +F+EM+ G P VT + +L AC+H G +D+G I
Sbjct: 275 DVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIH 334
Query: 241 QSMTRDY-GIEPQIEHYGCIVDLLSRV-------------------------------GR 268
+ + GI ++D+ ++ GR
Sbjct: 335 VYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGR 394
Query: 269 PEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRL-LDCR-SADSGTYV 323
+ A+D ++ MK I PD I LLSAC G LG +I K + LD R Y
Sbjct: 395 ADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYG 454
Query: 324 LLSNAYASSGKWKEAVQI--RAKMKEAGV---QKEPGCSSIEVNNEIHEFILGDIRHPQR 378
+ + SG +KEA ++ M+ GV C I N E+ E I
Sbjct: 455 CMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKAC-KIHKNLELGELI--------- 504
Query: 379 EQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
++++K+E +P + V+L +I W
Sbjct: 505 ---------AQKLMKIEPKNPGSYVLLSNIYATSARW 532
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 118/249 (47%), Gaps = 33/249 (13%)
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
HGL A VF ++ + + W MI G + + AL+L+ M + PN T +
Sbjct: 26 HGL-PYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFL 84
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
+C++ A + G+ IH+ + K+ + ++ V +LI+MY++ G ++ A +VF+ RDV
Sbjct: 85 FKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDV 144
Query: 183 TTYNSLIAGLAMH-------------------------------GRSIEAVEMFREMINQ 211
+Y ++I G A GR EA+E+F EM+
Sbjct: 145 VSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKM 204
Query: 212 GIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEE 271
++P + T VL+ C+H G V+LG +I S ++G ++ ++DL S+ G E
Sbjct: 205 DVKPDESTMATVLSTCTHSGNVELGRQI-HSWIDNHGFGSNLKLVNALIDLYSKCGEMER 263
Query: 272 AYDFITNMK 280
A+ ++
Sbjct: 264 AHGLFEGLQ 272
>gi|115455891|ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa Japonica Group]
Length = 611
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/489 (44%), Positives = 305/489 (62%), Gaps = 34/489 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR+ HG +K G + L+ +Y +CG DV A+ VM
Sbjct: 156 EGRQAHGVAVKAGAAEHEYVAPTLINMYAECG----------------DVRAARVM---- 195
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
F R+ + V + AMI VR+ AL LFREMQ ++P VT++
Sbjct: 196 ------------FDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLI 243
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSAC+ LGALELGRWIH Y+ K R+D V ALI+MY++CG ++ A+ VF++M+ R
Sbjct: 244 SVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESR 303
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++ ++ A HG EA+ MF EM QG++P VTF+GVL ACSH G+V G + F
Sbjct: 304 DKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYF 363
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM R+YGI I+HYGC+ DLL+R G+ E AY FI + I P I+ +LLSAC HG
Sbjct: 364 DSM-REYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGD 422
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+ +G+++ +R+L+ + G YV+ SN A++G+W+E +R M E GV K PGCSSIE
Sbjct: 423 VDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCSSIE 482
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH-DIEDWEKEWALAI 419
++N +HEF GD HP ++ + + E+ + +KL GY P+T V H ++ + EK +L
Sbjct: 483 IDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPNTSHVFHVEMGEEEKATSLRY 542
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GL++T P TT+R+VKNLRVC DCHSM KL++ + R+II+RD NRFHHFE+
Sbjct: 543 HSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCHSMAKLVSMVFNRRIILRDLNRFHHFED 602
Query: 480 GTCSCGDYW 488
G CSCGDYW
Sbjct: 603 GVCSCGDYW 611
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 138/292 (47%), Gaps = 21/292 (7%)
Query: 103 LFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYS 162
+F M + V P+ T V +L AC+ A E GR H K + V LINMY+
Sbjct: 125 VFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYA 184
Query: 163 RCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVG 222
CGD+ A +F+ M V +YN++I EA+ +FREM +G++PT VT +
Sbjct: 185 ECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLIS 244
Query: 223 VLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIA 282
VL+AC+ G ++LG I R ++ ++ ++D+ ++ G E+A +M+ +
Sbjct: 245 VLSACALLGALELGRWI-HDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDME-S 302
Query: 283 PDHIMLGSLLSACKIHG----KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEA 338
D ++ A HG + + E++ K+ + D T++ + A + SG E
Sbjct: 303 RDKQAWSVMMVAYANHGYGREAISMFEEMKKQGM---KPDDVTFLGVLYACSHSGMVSEG 359
Query: 339 VQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDI--RHPQREQIYKKMQEL 388
+Q M+E G+ V+ H + D+ R Q E+ YK + EL
Sbjct: 360 LQYFDSMREYGI----------VSGIKHYGCVTDLLARSGQLERAYKFIDEL 401
>gi|296085273|emb|CBI29005.3| unnamed protein product [Vitis vinifera]
Length = 587
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 207/448 (46%), Positives = 296/448 (66%), Gaps = 6/448 (1%)
Query: 47 CNDV-----VASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARAL 101
CN+V V M N G ++AF +FS + +D V W +M+ + G+ AL
Sbjct: 140 CNEVGVDKGVLKVWMHNNKNTFGKRDDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEAL 199
Query: 102 DLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMY 161
LF +M+ V+P E T+V +LSAC+ LGAL+ G +H+Y+ +RI++N IVG AL++MY
Sbjct: 200 ALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMY 259
Query: 162 SRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFV 221
++CG I A QVF M+ +DV +N++IAG+A+HG EA +F+EM G+ P +TFV
Sbjct: 260 AKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQRLFKEMKEAGVEPNDITFV 319
Query: 222 GVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKI 281
+L+ACSH G+VD G ++ M+ YGIEP++EHYGC++DLL+R G EEA + I M +
Sbjct: 320 AMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTMPM 379
Query: 282 APDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQI 341
P+ LG+LL C+IHG +LGE + KRL++ + SG Y+LLSN YA++ KW +A ++
Sbjct: 380 EPNPCALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKV 439
Query: 342 RAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLE-GYSPS 400
R MK G+ K PG S IE+ +H F+ GD HP+ +IY+K+ E+ +K G+S
Sbjct: 440 RNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGHSAD 499
Query: 401 TEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIAN 460
T VL D+E+ +KE AL +HSE+LAI YGL+ IR+VKNLRVC DCH + KLI+
Sbjct: 500 TGDVLLDMEEEDKEHALPVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVTKLISK 559
Query: 461 ITKRKIIVRDRNRFHHFENGTCSCGDYW 488
+ R+IIVRDRNRFHHFE+G CSC D+W
Sbjct: 560 VYGREIIVRDRNRFHHFEDGECSCLDFW 587
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 44/229 (19%)
Query: 24 LVELYGKCGEFKDAMQLFDEM------P-------------------------------- 45
++ Y +CG+ +A+ LFD+M P
Sbjct: 185 MLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNR 244
Query: 46 -ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLF 104
E N +V T +++ Y + G + A +VF+ ++ KD + W +I G+ +G + A LF
Sbjct: 245 IEVNSIVG-TALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQRLF 303
Query: 105 REMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM-GKHRIDLNHIVGGALINMYSR 163
+EM+ V PN++T V +LSACS G ++ G+ + M + I+ G +I++ +R
Sbjct: 304 KEMKEAGVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLAR 363
Query: 164 CGDIDKALQVFEEMK-ERDVTTYNSLIAGLAMHGRSIEAVEMF-REMIN 210
G +++A+++ M E + +L+ G +HG + E EM + +IN
Sbjct: 364 AGLLEEAMELIGTMPMEPNPCALGALLGGCRIHG-NFELGEMVGKRLIN 411
>gi|125546028|gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/489 (44%), Positives = 305/489 (62%), Gaps = 34/489 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR+ HG +K G + L+ +Y +CG DV A+ VM
Sbjct: 156 EGRQAHGVAVKAGAAEHEYVAPTLINMYAECG----------------DVRAARVM---- 195
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
F R+ + V + AMI VR+ AL LFREMQ ++P VT++
Sbjct: 196 ------------FDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLI 243
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSAC+ LGALELGRWIH Y+ K R+D V ALI+MY++CG ++ A+ VF++M+ R
Sbjct: 244 SVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESR 303
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++ ++ A HG EA+ MF EM QG++P VTF+GVL ACSH G+V G + F
Sbjct: 304 DKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYF 363
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM R+YGI I+HYGC+ DLL+R G+ E AY FI + I P I+ +LLSAC HG
Sbjct: 364 DSM-REYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGD 422
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+ +G+++ +R+L+ + G YV+ SN A++G+W+E +R M E GV K PGCSSIE
Sbjct: 423 VDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCSSIE 482
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH-DIEDWEKEWALAI 419
++N +HEF GD HP ++ + + E+ + +KL GY P+T V H ++ + EK +L
Sbjct: 483 IDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPNTSHVFHVEMGEEEKATSLRY 542
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GL++T P TT+R+VKNLRVC DCHSM KL++ + R+II+RD NRFHHFE+
Sbjct: 543 HSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCHSMAKLVSMVFNRRIILRDLNRFHHFED 602
Query: 480 GTCSCGDYW 488
G CSCGDYW
Sbjct: 603 GVCSCGDYW 611
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 138/292 (47%), Gaps = 21/292 (7%)
Query: 103 LFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYS 162
+F M + V P+ T V +L AC+ A E GR H K + V LINMY+
Sbjct: 125 VFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYA 184
Query: 163 RCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVG 222
CGD+ A +F+ M V +YN++I EA+ +FREM +G++PT VT +
Sbjct: 185 ECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLIS 244
Query: 223 VLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIA 282
VL+AC+ G ++LG I R ++ ++ ++D+ ++ G E+A +M+ +
Sbjct: 245 VLSACALLGALELGRWI-HDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDME-S 302
Query: 283 PDHIMLGSLLSACKIHG----KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEA 338
D ++ A HG + + E++ K+ + D T++ + A + SG E
Sbjct: 303 RDKQAWSVMMVAYANHGYGREAISMFEEMKKQGM---KPDDVTFLGVLYACSHSGMVSEG 359
Query: 339 VQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDI--RHPQREQIYKKMQEL 388
+Q M+E G+ V+ H + D+ R Q E+ YK + EL
Sbjct: 360 LQYFDSMREYGI----------VSGIKHYGCVTDLLARSGQLERAYKFIDEL 401
>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Vitis vinifera]
Length = 540
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/488 (43%), Positives = 299/488 (61%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+E+H Q++K GL L++LY CG A +FDEMPE
Sbjct: 85 EGQELHSQIVKAGLDFETPLLNGLIKLYAACGCMDYACVMFDEMPE-------------- 130
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
D+ W+ M+ G +NG+ L L REMQ +NV + T+
Sbjct: 131 ------------------PDSASWSTMVSGYSQNGQAVETLKLLREMQAENVSSDAFTLA 172
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+ C LG L+LG+W+HSY+ K + ++ ++G AL+ MYS+CG +D AL+VF+ M ER
Sbjct: 173 SVVGVCGDLGVLDLGKWVHSYIDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAER 232
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DVTT++ +IAG A+HG +A+++F M I P VTF VL+A SH GLV+ G +IF
Sbjct: 233 DVTTWSIMIAGYAIHGHDEKALQLFDAMKRSKIIPNCVTFTSVLSAYSHSGLVEKGHQIF 292
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
++M +Y I PQI+HYGC+VDL R G A+ FI M I P+ ++ +LL ACK HG
Sbjct: 293 ETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGY 352
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
LGE I++++L + YV +SN YAS G+W Q+R+ MKE +K+ G SSIE
Sbjct: 353 KGLGEHISRKILKLDPSSPENYVFVSNVYASLGRWSSVCQVRSLMKEKAPKKQHGWSSIE 412
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+N +H+FI+G+ HP+RE+IY + ++ + +K G+ ST VLHDI++ EKE+AL +H
Sbjct: 413 INFMVHKFIMGEESHPKREKIYGMLHQMARKLKQVGHVASTVDVLHDIDEEEKEYALGLH 472
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLAI YGL+ T + IR+VKNLR C DCH +IKLI+ + R+II+RDR FHHF
Sbjct: 473 SERLAIAYGLLHTPNGSPIRIVKNLRACRDCHEVIKLISEVYNREIILRDRVCFHHFRER 532
Query: 481 TCSCGDYW 488
CSC DYW
Sbjct: 533 GCSCNDYW 540
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 173/384 (45%), Gaps = 39/384 (10%)
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
HG V A +FS + W +I G + A+ L+++M + PN T V
Sbjct: 14 HGHVAYAHCIFSCTHHPNLFMWNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFGFV 73
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L+AC +L L G+ +HS + K +D + LI +Y+ CG +D A +F+EM E D
Sbjct: 74 LNACCKLLRLCEGQELHSQIVKAGLDFETPLLNGLIKLYAACGCMDYACVMFDEMPEPDS 133
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
+++++++G + +G+++E +++ REM + + T V+ C G++DLG +
Sbjct: 134 ASWSTMVSGYSQNGQAVETLKLLREMQAENVSSDAFTLASVVGVCGDLGVLDLGKWVHSY 193
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG--- 299
+ ++ G++ + +V + S+ G + A M D +++ IHG
Sbjct: 194 IDKE-GVKIDVVLGTALVGMYSKCGSLDNALKVFQGMA-ERDVTTWSIMIAGYAIHGHDE 251
Query: 300 -KLQLGEQI--AKRLLDCRSADSGTYVLLSNAYASSG-----------KWKEAVQIRAKM 345
LQL + + +K + +C T+ + +AY+ SG W E +I ++
Sbjct: 252 KALQLFDAMKRSKIIPNCV-----TFTSVLSAYSHSGLVEKGHQIFETMWTE-YKITPQI 305
Query: 346 KEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQ-----------REQIYKKMQE--LKQIV 392
K G + C + V + H+FI P + YK + E ++I+
Sbjct: 306 KHYGCMVDLFCRAGMVGHA-HKFIQTMPIEPNVVLWRTLLGACKTHGYKGLGEHISRKIL 364
Query: 393 KLEGYSPSTEVVLHDIEDWEKEWA 416
KL+ SP V + ++ W+
Sbjct: 365 KLDPSSPENYVFVSNVYASLGRWS 388
>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/489 (44%), Positives = 305/489 (62%), Gaps = 34/489 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR+ HG +K G + L+ +Y +CG DV A+ VM
Sbjct: 156 EGRQAHGVAVKAGAAEHEYVAPTLINMYAECG----------------DVRAARVM---- 195
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
F R+ + V + AMI VR+ AL LFREMQ ++P VT++
Sbjct: 196 ------------FDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLI 243
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSAC+ LGALELGRWIH Y+ K R+D V ALI+MY++CG ++ A+ VF++M+ R
Sbjct: 244 SVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESR 303
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++ ++ A HG EA+ MF EM QG++P VTF+GVL ACSH G+V G + F
Sbjct: 304 DKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYF 363
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM R+YGI I+HYGC+ DLL+R G+ E AY FI + I P I+ +LLSAC HG
Sbjct: 364 DSM-REYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGD 422
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+ +G+++ +R+L+ + G YV+ SN A++G+W+E +R M E GV K PGCSSIE
Sbjct: 423 VDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCSSIE 482
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH-DIEDWEKEWALAI 419
++N +HEF GD HP ++ + + E+ + +KL GY P+T V H ++ + EK +L
Sbjct: 483 IDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPNTSHVFHVEMGEEEKATSLRY 542
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GL++T P TT+R+VKNLRVC DCHSM KL++ + R+II+RD NRFHHFE+
Sbjct: 543 HSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCHSMAKLVSMVFNRRIILRDLNRFHHFED 602
Query: 480 GTCSCGDYW 488
G CSCGDYW
Sbjct: 603 GVCSCGDYW 611
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 152/331 (45%), Gaps = 26/331 (7%)
Query: 69 AFEVFSRVKVKDTVCW-TAMIDGLVRNGEMA----RALDLFREMQRDNVRPNEVTIVCVL 123
A +VF R+ V W ++ G R G A +F M + V P+ T V +L
Sbjct: 86 ARQVFDRIPHPGDVVWYNTLLRGYARGGWGGGCAEEAARVFVRMMEEGVAPDTYTFVSLL 145
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
AC+ A E GR H K + V LINMY+ CGD+ A +F+ M V
Sbjct: 146 KACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVV 205
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
+YN++I EA+ +FREM +G++PT VT + VL+AC+ G ++LG I
Sbjct: 206 SYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWI-HDY 264
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG---- 299
R ++ ++ ++D+ ++ G E+A +M+ + D ++ A HG
Sbjct: 265 IRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDME-SRDKQAWSVMMVAYANHGYGRE 323
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+ + E++ K+ + D T++ + A + SG E +Q M+E G+
Sbjct: 324 AISMFEEMKKQGM---KPDDVTFLGVLYACSHSGMVSEGLQYFDSMREYGI--------- 371
Query: 360 EVNNEIHEFILGDI--RHPQREQIYKKMQEL 388
V+ H + D+ R Q E+ YK + EL
Sbjct: 372 -VSGIKHYGCVTDLLARSGQLERAYKFIDEL 401
>gi|115456255|ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711802|gb|ABF99597.1| expressed protein [Oryza sativa Japonica Group]
gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|125588431|gb|EAZ29095.1| hypothetical protein OsJ_13153 [Oryza sativa Japonica Group]
gi|215736898|dbj|BAG95827.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 602
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/433 (46%), Positives = 296/433 (68%), Gaps = 1/433 (0%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
M +C+ G + +A VF R+ + V W+AMI G VR G + A+DLFREMQ + V+ +
Sbjct: 171 MYSCF-GGGFLGDARNVFDRMPKESAVTWSAMIGGYVRGGLSSDAVDLFREMQANGVQAD 229
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
EVT++ VL+A + LGALEL RW+ ++ + I + + ALI+ ++CGD+D A+ VFE
Sbjct: 230 EVTVIGVLAAATDLGALELARWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFE 289
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
M++R V ++ S+I LAM GR EAV +F EM G+ P V F+GVL ACSH G+VD
Sbjct: 290 GMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLTACSHAGMVDE 349
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G F +M +YGIEP+IEHYGC+VD+ R G E A +F+ M I P+ ++ SL+SAC
Sbjct: 350 GCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQPNPVIWRSLVSAC 409
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
+ HG+L+LGE I + LL A Y++LSN +A + +WKE +IR +M + G++K PG
Sbjct: 410 RAHGRLELGESITRSLLHEYPAHEANYIMLSNVFALTQRWKEKSEIRREMSKRGIKKVPG 469
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
CS +E++ E+HEFI GD HPQ + IY+ ++E+ + ++ G+ +T VL D+++ +KE
Sbjct: 470 CSIVELDGEVHEFIAGDESHPQYKDIYRMVEEMARELRRVGHIAATSEVLLDLDEEDKEG 529
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
AL HSE+LAI + L+ T P T +RVVKNLRVC+DCH+ IK I+ + +R+I+VRDR+RFH
Sbjct: 530 ALQWHSEKLAIAFALLRTPPGTQVRVVKNLRVCSDCHAAIKCISQVYRREIVVRDRSRFH 589
Query: 476 HFENGTCSCGDYW 488
F++G+CSC D+W
Sbjct: 590 RFKDGSCSCKDFW 602
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 118/259 (45%), Gaps = 41/259 (15%)
Query: 99 RALDLFREMQRDNVRPNEVTIVCVLSACSQL-GALELGRWIHSYMGKHRIDLNHIVGGAL 157
RA F M R V PN+ T +L AC+ L G+ ++G H+ K + V L
Sbjct: 109 RAAAFFPLMLRGAVVPNKFTFPFLLKACAALPGSPDVGLQAHAAALKFGFATDQYVSNTL 168
Query: 158 INMYSRC---GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIR 214
I+MYS C G + A VF+ M + T++++I G G S +AV++FREM G++
Sbjct: 169 IHMYS-CFGGGFLGDARNVFDRMPKESAVTWSAMIGGYVRGGLSSDAVDLFREMQANGVQ 227
Query: 215 PTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYD 274
+VT +GVL A + G ++L + + + R+ GI + ++D L++ G + A
Sbjct: 228 ADEVTVIGVLAAATDLGALELARWVRRFVERE-GIGKSVTLCNALIDTLAKCGDVDGAVA 286
Query: 275 FITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGK 334
M+ RS S T V+ +A A G+
Sbjct: 287 VFEGMQQ---------------------------------RSVVSWTSVI--DALAMEGR 311
Query: 335 WKEAVQIRAKMKEAGVQKE 353
KEAV++ +MK AGV +
Sbjct: 312 GKEAVRVFEEMKVAGVPPD 330
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/493 (42%), Positives = 318/493 (64%), Gaps = 5/493 (1%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQL---FDEMPECNDVVASTVMI 57
E E+ +++K +R + ST + +V + + Q+ D+ +++ +I
Sbjct: 218 EALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALI 277
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y++ G VE A +F + KD + W +I G AL LF+EM R PN+V
Sbjct: 278 DLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDV 337
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG--GALINMYSRCGDIDKALQVFE 175
T++ +L AC+ LGA+E+GRWIH Y+ K + + +LI+MY++CGDI+ A QVF+
Sbjct: 338 TMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFD 397
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
+ R ++++N++I G AMHGR+ A ++F M I P +TFVG+L+ACSH G++DL
Sbjct: 398 SILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDL 457
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G IF+SM DY I P++EHYGC++DLL G +EA + I M++ PD ++ SLL AC
Sbjct: 458 GRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKAC 517
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
K++ ++LGE A+ L+ + G+YVLLSN YA++G+W E +IRA + + G++K PG
Sbjct: 518 KMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPG 577
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
CSSIE+++ +HEFI+GD HP+ +IY ++E++ +++ G+ P T VL ++E+ KE
Sbjct: 578 CSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEG 637
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
AL HSE+LAI +GLISTKP T + +VKNLRVC +CH KLI+ I KR+II RDR RFH
Sbjct: 638 ALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFH 697
Query: 476 HFENGTCSCGDYW 488
HF +G CSC DYW
Sbjct: 698 HFRDGVCSCNDYW 710
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 180/346 (52%), Gaps = 36/346 (10%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG++IHG VLKLG + L+ +Y + G +DA ++FD+ DVV+ T +I Y
Sbjct: 121 EGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSH-RDVVSYTALITGY 179
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G + +A ++F + +KD V W AMI G G AL+LF+EM + NVRP+E T+V
Sbjct: 180 ASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMV 239
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+SAC+Q ++ELGR +HS++ H N + ALI++Y +CG+++ A +FE + +
Sbjct: 240 SVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYK 299
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++N+LI G EA+ +F+EM+ G P VT + +L AC+H G +++G I
Sbjct: 300 DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIH 359
Query: 241 QSMT-RDYGIEPQIEHYGCIVDLLSRV-------------------------------GR 268
+ R G+ H ++D+ ++ GR
Sbjct: 360 VYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGR 419
Query: 269 PEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
A+D + M+ I PD I LLSAC G L LG I + +
Sbjct: 420 ANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 465
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 164/408 (40%), Gaps = 100/408 (24%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
R IH Q++K GL + KL+E F FD +P
Sbjct: 19 RMIHAQMIKTGLHNTNYALSKLIE-------FCVLSPHFDGLPY---------------- 55
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
A VF ++ + + W M G + + AL L+ M + PN T +
Sbjct: 56 ------AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFL 109
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L +C++ A G+ IH ++ K DL+ V +LI+MY + G ++ A +VF++ RDV
Sbjct: 110 LKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDV 169
Query: 183 TTYNSLIAGLAMH-------------------------------GRSIEAVEMFREMINQ 211
+Y +LI G A G + EA+E+F+EM+
Sbjct: 170 VSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKT 229
Query: 212 GIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEE 271
+RP + T V V++AC+ ++LG ++ S D+G ++ ++DL + G E
Sbjct: 230 NVRPDESTMVSVVSACAQSASIELGRQV-HSWIDDHGFGSNLKIVNALIDLYIKCGEVET 288
Query: 272 AYDFI------------------TNMKI----------------APDHIMLGSLLSACKI 297
A T+M + +P+ + + S+L AC
Sbjct: 289 ACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAH 348
Query: 298 HGKLQLGE----QIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQI 341
G +++G I KRL +A S L+ + YA G + A Q+
Sbjct: 349 LGAIEIGRWIHVYINKRLKGVANASSHRTSLI-DMYAKCGDIEAAQQV 395
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/493 (42%), Positives = 320/493 (64%), Gaps = 5/493 (1%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPE---CNDVVASTVMI 57
E E+ +++K +R + ST + ++ + G + Q+ + + ++ +I
Sbjct: 218 EALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALI 277
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y + G +E A +F + KD + W +I G AL LF++M R +PN+V
Sbjct: 278 DLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDV 337
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHI--VGGALINMYSRCGDIDKALQVFE 175
T++ +LSAC+ LGA+++GRWIH Y+ K + + + +LI+MY++CGDI+ A QVF+
Sbjct: 338 TMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFD 397
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
M R ++++N++I G AMHGR+ A ++F M GI P +TFVG+L+ACSH G++DL
Sbjct: 398 SMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDL 457
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G IF+SMTRDY + P++EHYGC++DL G +EA I M++ PD ++ SLL AC
Sbjct: 458 GRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKAC 517
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
K+HG ++LGE A+ L+ + G+YVLLSN YA++ +W E + RA + + G++K PG
Sbjct: 518 KMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPG 577
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
CSSIE+++ +HEFI+GD HP+ +IY ++E++ +++ G+ P T VL ++E+ KE
Sbjct: 578 CSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEG 637
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
AL HSE+LAI +GLISTKP T + +VKNLRVC +CH KLI+ I KR+II RDR RFH
Sbjct: 638 ALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFH 697
Query: 476 HFENGTCSCGDYW 488
HF +G CSC DYW
Sbjct: 698 HFRDGECSCNDYW 710
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 112/346 (32%), Positives = 181/346 (52%), Gaps = 36/346 (10%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+++HGQVLK G + L+ +Y + G +DA ++ D+ DVV+ T +I Y
Sbjct: 121 EGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSH-RDVVSYTALITGY 179
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G +E+A ++F + VKD V W A I G G AL+LF++M + NVRP+E T+V
Sbjct: 180 ASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMV 239
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSAC+Q G++ELGR +HS++ H N + ALI++YS+CG+++ A +F+ + +
Sbjct: 240 TVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNK 299
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++N+LI G EA+ +F++M+ G +P VT + +L+AC+H G +D+G I
Sbjct: 300 DVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIH 359
Query: 241 QSMTR--------------------------------DYGIEPQIEHYGCIVDLLSRVGR 268
+ + D + + + ++ + GR
Sbjct: 360 VYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGR 419
Query: 269 PEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
A+D + M+ I PD I LLSAC G L LG I + +
Sbjct: 420 ANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 465
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 163/412 (39%), Gaps = 100/412 (24%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
R IH Q++K GL + KL+E F D +P
Sbjct: 19 RIIHAQMIKTGLHNTNYALSKLLEXCVLSPHF-------DGLPY---------------- 55
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
A VF ++ + W M G + + AL L+ M + PN T +
Sbjct: 56 ------AISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFL 109
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L +C++ A + G+ +H + K DL+ + +LI+MY + G ++ A +V ++ RDV
Sbjct: 110 LKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDV 169
Query: 183 TTYNSLIAGLAMH-------------------------------GRSIEAVEMFREMINQ 211
+Y +LI G A G EA+E+F++M+
Sbjct: 170 VSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKT 229
Query: 212 GIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEE 271
+RP + T V VL+AC+ G ++LG ++ S D+G ++ ++DL S+ G E
Sbjct: 230 NVRPDESTMVTVLSACAQSGSIELGRQV-HSWINDHGFGXNLKIVNALIDLYSKCGELET 288
Query: 272 A---YDFITNMKI-------------------------------APDHIMLGSLLSACKI 297
A + ++N + P+ + + S+LSAC
Sbjct: 289 ACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAH 348
Query: 298 HGKLQLGE----QIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
G + +G I KRL +A S L+ + YA G + A Q+ M
Sbjct: 349 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLI-DMYAKCGDIEAAQQVFDSM 399
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 119/267 (44%), Gaps = 28/267 (10%)
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC------GDIDKALQV 173
+ +L C L +L R IH+ M K + H AL + C + A+ V
Sbjct: 6 LSLLHXCKTLQSL---RIIHAQMIKTGL---HNTNYALSKLLEXCVLSPHFDGLPYAISV 59
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV 233
F+ ++E + +N++ G A+ + A++++ M++ G+ P TF +L +C+
Sbjct: 60 FDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAF 119
Query: 234 DLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLS 293
G ++ + + +G + + + ++ + + GR E+A + + D + +L++
Sbjct: 120 KEGQQLHGQVLK-FGFDLDLYIHTSLISMYVQNGRLEDAQK-VXDKSSHRDVVSYTALIT 177
Query: 294 ACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
G + E K + D ++ + YA +G +KEA+++ KM + V+ +
Sbjct: 178 GYASRGXI---ESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPD 234
Query: 354 --------PGCS---SIEVNNEIHEFI 369
C+ SIE+ ++H +I
Sbjct: 235 ESTMVTVLSACAQSGSIELGRQVHSWI 261
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/493 (42%), Positives = 322/493 (65%), Gaps = 5/493 (1%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQL---FDEMPECNDVVASTVMI 57
E E+ ++K +R + ST + +V + G + Q+ D+ +++ +I
Sbjct: 249 EALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALI 308
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y + G +E A +F R+ KD + W +I G AL LF+EM R PN+V
Sbjct: 309 DLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDV 368
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHI--VGGALINMYSRCGDIDKALQVFE 175
T++ +L AC+ LGA+++GRWIH Y+ K + + + +LI+MY++CGDI+ A QVF
Sbjct: 369 TMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFN 428
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
+ + ++++N++I G AMHGR+ + ++F M GI+P +TFVG+L+ACSH G++DL
Sbjct: 429 SILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDL 488
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G IF++MT+DY + P++EHYGC++DLL G +EA + I M++ PD ++ SLL AC
Sbjct: 489 GRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKAC 548
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
K+HG ++LGE A+ L+ + G+YVLLSN YAS+G+W E + RA + + G++K PG
Sbjct: 549 KMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPG 608
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
CSSIE+++ +HEFI+GD HP+ +IY ++E++ +++ G+ P T VL ++E+ KE
Sbjct: 609 CSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEG 668
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
AL HSE+LAI +GLISTKP T + +VKNLRVC +CH KLI+ I KR+II RDR RFH
Sbjct: 669 ALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFH 728
Query: 476 HFENGTCSCGDYW 488
HF +G CSC DYW
Sbjct: 729 HFRDGVCSCNDYW 741
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 183/351 (52%), Gaps = 46/351 (13%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG++IHG VLKLG + L+ +Y + G +DA ++FD+ P DVV+ T +I Y
Sbjct: 152 EGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPH-RDVVSYTALIKGY 210
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G +ENA ++F + VKD V W AMI G G AL+LF++M + NVRP+E T+V
Sbjct: 211 ASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMV 270
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+SAC+Q G++ELGR +H ++ H N + ALI++YS+CG+++ A +FE + +
Sbjct: 271 TVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK 330
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG---- 236
DV ++N+LI G EA+ +F+EM+ G P VT + +L AC+H G +D+G
Sbjct: 331 DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH 390
Query: 237 ---------------------------------FEIFQSMTRDYGIEPQIEHYGCIVDLL 263
++F S+ + + + ++
Sbjct: 391 VYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-----LHKSLSSWNAMIFGF 445
Query: 264 SRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
+ GR + ++D + M+ I PD I LLSAC G L LG I + +
Sbjct: 446 AMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTM 496
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 166/408 (40%), Gaps = 100/408 (24%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
R IH Q++K+GL + KL+E F F+ +P
Sbjct: 50 RIIHAQMIKIGLHNTNYALSKLIE-------FCILSPHFEGLPY---------------- 86
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
A VF ++ + + W M G + + AL L+ M + PN T V
Sbjct: 87 ------AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFV 140
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L +C++ A + G+ IH ++ K DL+ V +LI+MY + G ++ A +VF++ RDV
Sbjct: 141 LKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDV 200
Query: 183 TTY-------------------------------NSLIAGLAMHGRSIEAVEMFREMINQ 211
+Y N++I+G A G EA+E+F++M+
Sbjct: 201 VSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 260
Query: 212 GIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEE 271
+RP + T V V++AC+ G ++LG ++ D+G ++ ++DL S+ G E
Sbjct: 261 NVRPDESTMVTVVSACAQSGSIELGRQV-HLWIDDHGFGSNLKIVNALIDLYSKCGELET 319
Query: 272 AYDFI------------------TNMKI----------------APDHIMLGSLLSACKI 297
A T+M + P+ + + S+L AC
Sbjct: 320 ACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAH 379
Query: 298 HGKLQLGE----QIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQI 341
G + +G I KRL +A S L+ + YA G + A Q+
Sbjct: 380 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLI-DMYAKCGDIEAAHQV 426
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/489 (42%), Positives = 321/489 (65%), Gaps = 5/489 (1%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQL---FDEMPECNDVVASTVMI 57
E E+ +++K ++ + ST + ++ + + Q+ D+ +++ +I
Sbjct: 218 EALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALI 277
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y++ G VE A +F + KD + W +I G AL LF+EM R PNEV
Sbjct: 278 DLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEV 337
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHI--VGGALINMYSRCGDIDKALQVFE 175
T++ +L AC+ LGA+++GRWIH Y+ K +++ + +LI+MY++CGDI+ A QVF+
Sbjct: 338 TMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFD 397
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
M R ++++N++I G AMHGR+ A ++F M GI P +TFVG+L+ACSH G++DL
Sbjct: 398 SMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDL 457
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G IF+SMT DY I P++EHYGC++DLL G +EA + I +M++ PD ++ SLL AC
Sbjct: 458 GRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKAC 517
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
K+HG ++LGE A+ L+ +SG+YVLLSN YA++G+W E + RA + + G++K PG
Sbjct: 518 KMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPG 577
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
CSSIE+++ +HEFI+GD HP+ +IY ++E++ +++ G+ P T VL ++E+ KE
Sbjct: 578 CSSIEIDSVVHEFIIGDKLHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEG 637
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
AL HSE+LAI +GLISTKP T + +VKNLRVC +CH KLI+ I KR+II RDR RFH
Sbjct: 638 ALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFH 697
Query: 476 HFENGTCSC 484
HF +G CSC
Sbjct: 698 HFXDGVCSC 706
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 114/348 (32%), Positives = 181/348 (52%), Gaps = 36/348 (10%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG++IHG VLKLG + L+ +Y K G +DA ++FD+ DVV+ T +I Y
Sbjct: 121 EGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSH-RDVVSYTALIKGY 179
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+G + +A ++F + VKD V W A+I G G AL+LF+EM + NV+P+E T+V
Sbjct: 180 ASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMV 239
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSAC+Q ++ELGR +HS++ H N + ALI++Y +CG+++ A +FE + +
Sbjct: 240 TVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYK 299
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++N+LI G EA+ +F+EM+ G P +VT + +L AC+H G +D+G I
Sbjct: 300 DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIH 359
Query: 241 QSMTR--------------------------------DYGIEPQIEHYGCIVDLLSRVGR 268
+ + D + + + ++ + GR
Sbjct: 360 VYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGR 419
Query: 269 PEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
A+D + M+ I PD I LLSAC G L LG I + + +
Sbjct: 420 ANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTE 467
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 141/345 (40%), Gaps = 69/345 (20%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A VF ++ + + W M G + + AL L+ M + PN T +L AC++
Sbjct: 56 AISVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAK 115
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTY--- 185
A G+ IH ++ K DL+ V +LI MY + G + A +VF++ RDV +Y
Sbjct: 116 SKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTAL 175
Query: 186 ----------------------------NSLIAGLAMHGRSIEAVEMFREMINQGIRPTK 217
N+LI+G A G EA+E+F+EM+ ++P +
Sbjct: 176 IKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDE 235
Query: 218 VTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFI- 276
T V VL+AC+ ++LG ++ S D+G ++ ++DL + G E A
Sbjct: 236 STMVTVLSACAQSASIELGRQV-HSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFE 294
Query: 277 -----------------TNMKI----------------APDHIMLGSLLSACKIHGKLQL 303
T+M + +P+ + + S+L AC G + +
Sbjct: 295 GLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDI 354
Query: 304 GEQI---AKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
G I + L S S L + YA G + A Q+ M
Sbjct: 355 GRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSM 399
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 118/267 (44%), Gaps = 28/267 (10%)
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDK---ALQVFEE 176
+ +L C L +L R IH+ M K + + LI D A+ VF+
Sbjct: 6 LSLLHNCKTLQSL---RIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDS 62
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
++E ++ +N++ G A+ + A+ ++ MI+ G+ P TF +L AC+ G
Sbjct: 63 IQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREG 122
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLS 293
+I + + G + + + ++ + + GR E+A +D ++ + ++ S
Sbjct: 123 QQIHGHVLK-LGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYAS 181
Query: 294 ACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
I ++ ++I + D ++ L + YA +G +KEA+++ +M + V+ +
Sbjct: 182 NGYIXSAQKMFDEIPVK-------DVVSWNALISGYAETGNYKEALELFKEMMKTNVKPD 234
Query: 354 PGC-----------SSIEVNNEIHEFI 369
+SIE+ ++H +I
Sbjct: 235 ESTMVTVLSACAQSASIELGRQVHSWI 261
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/405 (49%), Positives = 288/405 (71%)
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
WT+MI G V+ G+ A+ LF +M+ V+ NEVT+V VL+AC+ LGAL+LG IH Y
Sbjct: 195 WTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSN 254
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
+H N + LI+MY +CG +++A +VFEEM+ER V +++++I GLAMHGR+ EA+
Sbjct: 255 RHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALR 314
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
+F +M GI P VTF+G+L+ACSH GL+ G F SMTRDYGI PQIEHYGC+VDLL
Sbjct: 315 LFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLL 374
Query: 264 SRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV 323
SR G EA++FI NM + P+ ++ G+LL AC++H +++ E+ K LL+ + G YV
Sbjct: 375 SRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYV 434
Query: 324 LLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYK 383
+LSN YA +G+W++ ++R MK+ V+K PG SSI V+ +HEF+ G+ HP EQI++
Sbjct: 435 VLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQ 494
Query: 384 KMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVK 443
+ +EL + ++L+GY P+T VVL DIE+ EK ++ HSE+LA+ +GL++T T IR++K
Sbjct: 495 RWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMK 554
Query: 444 NLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
NLR+C DCHS KLI+ I R+I+VRDRNRFH F + +CSC DYW
Sbjct: 555 NLRICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 599
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 48/250 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPE----CNDVVASTVMI 57
GR +HG V K+G RS S ++ Y +CG+ K+A+ LF +M E CN+V V+
Sbjct: 180 GRILHGVVEKVGFRSWTS----MIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLA 235
Query: 58 NC----------------------------------YVEHGLVENAFEVFSRVKVKDTVC 83
C YV+ G +E A +VF ++ + V
Sbjct: 236 ACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVS 295
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W+AMI GL +G AL LF +M + + PN VT + +L ACS +G + GR + M
Sbjct: 296 WSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMT 355
Query: 144 KHRIDLNHIVG-GALINMYSRCGDIDKALQVFEEMKER-DVTTYNSLIAGLAMHGRSIEA 201
+ + I G ++++ SR G + +A + M + + + +L+ +H +
Sbjct: 356 RDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVH----KN 411
Query: 202 VEMFREMINQ 211
VEM E I
Sbjct: 412 VEMAEEAIKH 421
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 128/311 (41%), Gaps = 53/311 (17%)
Query: 80 DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIH 139
+T W + + L A+ LF +++ +V P+ T VL AC L L GR +H
Sbjct: 125 ETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILH 184
Query: 140 SYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSI 199
+ K VG ++ S+IAG G++
Sbjct: 185 GVVEK--------VG---------------------------FRSWTSMIAGYVQCGKAK 209
Query: 200 EAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI 259
EA+ +F +M G++ +VT V VL AC+ G +DLG I + R +G + + +
Sbjct: 210 EAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNR-HGFKRNVRISNTL 268
Query: 260 VDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRS 316
+D+ + G EEA M+ + M+G L +HG+ + ++ +
Sbjct: 269 IDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGL----AMHGRAEEALRLFSDMSQVGI 324
Query: 317 ADSG-TYVLLSNAYASSGKWKEAVQIRAKM-KEAGVQKE---PGC-----SSIEVNNEIH 366
+G T++ L +A + G E + A M ++ G+ + GC S + +E H
Sbjct: 325 EPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAH 384
Query: 367 EFILGDIRHPQ 377
EFIL P
Sbjct: 385 EFILNMPMKPN 395
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/489 (43%), Positives = 302/489 (61%), Gaps = 33/489 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+++H +KLGL N L+ +Y C + A ++FDE+ E C
Sbjct: 145 QGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILE-----------PC- 192
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V + A+I G R+ AL LFR++Q ++PN+VT++
Sbjct: 193 --------------------VVSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVL 232
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLS+C+ LGAL+LG+WIH Y+ K+ +D V ALI+MY++CG +D A+ VFE M R
Sbjct: 233 SVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVR 292
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++++I AMHG+ + + MF EM ++P ++TF+G+L ACSH GLVD GF F
Sbjct: 293 DTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLGLLYACSHTGLVDEGFRYF 352
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM+ YGI P I+HYGC+VDLL R G EAY FI + I P I+ +LLS+C HG
Sbjct: 353 YSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHGN 412
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
L+L +Q+ ++L+ + G YV+LSN A +GKW++ +R M G K PGCSSIE
Sbjct: 413 LELAKQVMNQILELDDSHGGDYVILSNLCARAGKWEDVDTLRKLMIHKGAVKIPGCSSIE 472
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH-DIEDWEKEWALAI 419
V+N +HEF GD H +++ + EL + +K GY P T +V+H D+ED EKE L
Sbjct: 473 VDNVVHEFFSGDGVHYVSTALHRALDELVKELKSVGYVPDTSLVVHPDMEDEEKEITLRY 532
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GL++T P TTIRVVKNLRVC DCHS KLI+++ R+II+RD RFHHF++
Sbjct: 533 HSEKLAISFGLLNTPPGTTIRVVKNLRVCGDCHSAAKLISSLIDREIILRDVQRFHHFKD 592
Query: 480 GTCSCGDYW 488
G CSCGDYW
Sbjct: 593 GKCSCGDYW 601
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 157/307 (51%), Gaps = 12/307 (3%)
Query: 48 NDVVASTVMINCYVEH---GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLF 104
ND+ T +IN ++ ++ A ++F + D V + +M G R+ +A+ LF
Sbjct: 56 NDLQILTKLINSCTQNPTTASMDYAHQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLF 115
Query: 105 REMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC 164
+ N+ P++ T +L AC A + G+ +H K ++ N V LINMY+ C
Sbjct: 116 IKALNYNLLPDDYTFPSLLKACVVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGC 175
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL 224
D+D A +VF+E+ E V +YN++I G A R EA+ +FR++ + ++P VT + VL
Sbjct: 176 NDVDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVL 235
Query: 225 NACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPD 284
++C+ G +DLG I + + ++ G++ ++ ++D+ ++ G + A +M + D
Sbjct: 236 SSCALLGALDLGKWIHEYVKKN-GLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVR-D 293
Query: 285 HIMLGSLLSACKIHGK----LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQ 340
+++ A +HG+ + + E++A+ + D T++ L A + +G E +
Sbjct: 294 TQAWSAMIVAYAMHGQGQDVMSMFEEMARAKV---QPDEITFLGLLYACSHTGLVDEGFR 350
Query: 341 IRAKMKE 347
M E
Sbjct: 351 YFYSMSE 357
>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/484 (43%), Positives = 307/484 (63%), Gaps = 1/484 (0%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
+H + G ++ + V +Y G+ F E+ DVV T M+ G
Sbjct: 146 VHAAAFQHGHATDPHVQSGAVSMYAAVGDVGAVRAAFAEIVS-PDVVCVTAMLGALSAGG 204
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
V+ A E+F + +D V W AM+ G VR G AL LF EMQ+ V +EVT+V VL+
Sbjct: 205 DVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQKAGVAVSEVTLVSVLT 264
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
AC+Q+GALE G W+HSY+ + ++ +G AL++MYS+CG + +++VFE M+ER++ T
Sbjct: 265 ACAQMGALERGMWVHSYVCSRGMRVSVTLGTALVDMYSKCGVVTMSMEVFETMRERNIYT 324
Query: 185 YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT 244
+ S ++GLAM+G E +E+F+ M + G+ P VTFV VL CS GLV+ G F SM
Sbjct: 325 WTSALSGLAMNGMGEECLELFKRMESAGMEPNGVTFVAVLRGCSVAGLVEEGRACFDSMK 384
Query: 245 RDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLG 304
+ +EP +EHYGC+VDL R GR ++A DFI +M + P + G+LL+A +IH + LG
Sbjct: 385 DKHKVEPWLEHYGCMVDLYGRAGRLDDAVDFINSMPVEPHEGVWGALLNASRIHNNVDLG 444
Query: 305 EQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNE 364
+ +L + S + +VLLSN YA S WK ++R MK GV+K PGCS+IEV+ +
Sbjct: 445 KHAMHKLTEIESKNDAAHVLLSNIYAESHNWKGVSKVRNMMKSKGVKKMPGCSAIEVDGK 504
Query: 365 IHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERL 424
+HEF +G HP+ + I + E+ ++L+GY+ +T+ VL DIE+ EKE A+++HSE+L
Sbjct: 505 VHEFFVGSKSHPRYKDIQTMLAEMSHRLRLQGYAANTKEVLFDIEEEEKEGAISLHSEKL 564
Query: 425 AICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSC 484
A+ +GLI+ T IR+VKNLRVC DCH KLI+ + R+I++RDRNRFHHF++G CSC
Sbjct: 565 ALAFGLITLPEDTVIRIVKNLRVCKDCHDYTKLISKVFDREIVMRDRNRFHHFKHGACSC 624
Query: 485 GDYW 488
DYW
Sbjct: 625 RDYW 628
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 37/179 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H V G+R + + LV++Y KCG +M++F+ M E
Sbjct: 275 GMWVHSYVCSRGMRVSVTLGTALVDMYSKCGVVTMSMEVFETMRE--------------- 319
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ WT+ + GL NG L+LF+ M+ + PN VT V
Sbjct: 320 -----------------RNIYTWTSALSGLAMNGMGEECLELFKRMESAGMEPNGVTFVA 362
Query: 122 VLSACSQLGALELGRWIHSYM-GKHRID--LNHIVGGALINMYSRCGDIDKALQVFEEM 177
VL CS G +E GR M KH+++ L H G ++++Y R G +D A+ M
Sbjct: 363 VLRGCSVAGLVEEGRACFDSMKDKHKVEPWLEHY--GCMVDLYGRAGRLDDAVDFINSM 419
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/487 (42%), Positives = 309/487 (63%), Gaps = 1/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++HG ++ G ++ + L+ LY + G ++F+ +P C D V T M+
Sbjct: 127 GLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIP-CPDFVCRTAMVTACA 185
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G V A ++F + +D + W AMI G + GE AL++F MQ + V+ N V ++
Sbjct: 186 RCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMIS 245
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLSAC+QLGAL+ GRW HSY+ +++I + + L+++Y++CGD++KA++VF M+E++
Sbjct: 246 VLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKN 305
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V T++S + GLAM+G + +E+F M G+ P VTFV VL CS G VD G F
Sbjct: 306 VYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFD 365
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM ++GIEPQ+EHYGC+VDL +R GR E+A I M + P + SLL A +++ L
Sbjct: 366 SMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNL 425
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LG +K++L+ +A+ G YVLLSN YA S W +R MK GV+K+PGCS +EV
Sbjct: 426 ELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEV 485
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N E+HEF +GD HP+ QI +++ + ++L GY T V+ DI++ EKE AL +HS
Sbjct: 486 NGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHS 545
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+ AI +G++S K IR+VKNLRVC DCH + +I+ I R+IIVRDRNRFHHF++G
Sbjct: 546 EKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGH 605
Query: 482 CSCGDYW 488
CSC +W
Sbjct: 606 CSCNGFW 612
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 89/431 (20%), Positives = 172/431 (39%), Gaps = 100/431 (23%)
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM--QRDNVRPNEVTI 119
+H ++ A ++ R + +MI ++ ++ D +R + ++++P+ T+
Sbjct: 52 DHKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTV 111
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSR---------------- 163
++ AC+ L E G +H + D + V LI++Y+
Sbjct: 112 NFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPC 171
Query: 164 ---------------CGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM 208
CGD+ A ++FE M ERD +N++I+G A G S EA+ +F M
Sbjct: 172 PDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLM 231
Query: 209 INQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGR 268
+G++ V + VL+AC+ G +D G + R+ I+ + +VDL ++ G
Sbjct: 232 QLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERN-KIKITVRLATTLVDLYAKCGD 290
Query: 269 PEEAYDFITNMK----------------------------------IAPDHIMLGSLLSA 294
E+A + M+ + P+ + S+L
Sbjct: 291 MEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRG 350
Query: 295 CKIHGKLQLGEQIAKRLLDCRSADSGT------YVLLSNAYASSGKWKEAVQIRAKMKEA 348
C + G + G+ R D + G Y L + YA +G+ ++AV I
Sbjct: 351 CSVVGFVDEGQ----RHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSI------- 399
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQ----ELKQIVKLEGYSPSTEVV 404
+Q+ P + H + + H R +YK ++ K++++LE + V+
Sbjct: 400 -IQQMP--------MKPHAAVWSSLLHASR--MYKNLELGVLASKKMLELETANHGAYVL 448
Query: 405 LHDIEDWEKEW 415
L +I +W
Sbjct: 449 LSNIYADSNDW 459
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 34/197 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR H + + ++ LV+LY KCG+ + AM++F M E
Sbjct: 258 QGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEE-------------- 303
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
K+ W++ ++GL NG + L+LF M++D V PN VT V
Sbjct: 304 ------------------KNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFV 345
Query: 121 CVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
VL CS +G ++ G R S + I+ G L+++Y+R G ++ A+ + ++M
Sbjct: 346 SVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPM 405
Query: 180 RD-VTTYNSLIAGLAMH 195
+ ++SL+ M+
Sbjct: 406 KPHAAVWSSLLHASRMY 422
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/484 (42%), Positives = 293/484 (60%), Gaps = 32/484 (6%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
IHG LK S+ S L +Y K E + A +LFDE PE
Sbjct: 341 IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPE------------------ 382
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
K W AMI G +NG A+ LFREMQ+ PN VTI C+LS
Sbjct: 383 --------------KSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILS 428
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
AC+QLGAL LG+W+H + + + V ALI MY++CG I +A ++F+ M +++ T
Sbjct: 429 ACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVT 488
Query: 185 YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT 244
+N++I+G +HG+ EA+ +F EM+N GI PT VTF+ VL ACSH GLV G EIF SM
Sbjct: 489 WNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMI 548
Query: 245 RDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLG 304
YG EP ++HY C+VD+L R G + A FI M I P + +LL AC+IH L
Sbjct: 549 HRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLA 608
Query: 305 EQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNE 364
++++L + + G +VLLSN +++ + +A +R K+ + K PG + IE+
Sbjct: 609 RTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGET 668
Query: 365 IHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERL 424
H F GD HPQ ++IY+K+++L+ ++ GY P TE+ LHD+E+ E+E + +HSERL
Sbjct: 669 PHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERL 728
Query: 425 AICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSC 484
AI +GLI+T+P T IR++KNLRVC DCH++ KLI+ IT+R I+VRD NRFHHF++G CSC
Sbjct: 729 AIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSC 788
Query: 485 GDYW 488
GDYW
Sbjct: 789 GDYW 792
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 154/372 (41%), Gaps = 70/372 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR IHGQ + G S +V++Y K +DA ++FD MPE
Sbjct: 138 GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPE--------------- 182
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN-VRPNEVTIV 120
KDT+ W MI G +N ++ +FR++ ++ R + T++
Sbjct: 183 -----------------KDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLL 225
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L A ++L L LG IHS K + V I++YS+CG I +F E ++
Sbjct: 226 DILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKP 285
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL---------------- 224
D+ YN++I G +G + ++ +F+E++ G R T V ++
Sbjct: 286 DIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYC 345
Query: 225 ---NACSHGGLVDLGFEIFQSMTR--------DYGIEPQIEHYGCIVDLLSRVGRPEEAY 273
N SH + ++ + D E + + ++ ++ G E+A
Sbjct: 346 LKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAI 405
Query: 274 DFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNA-- 328
M+ +P+ + + +LSAC G L LG+ + + RS D + + +S A
Sbjct: 406 SLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLV---RSTDFESSIYVSTALI 462
Query: 329 --YASSGKWKEA 338
YA G EA
Sbjct: 463 GMYAKCGSIAEA 474
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 156/370 (42%), Gaps = 56/370 (15%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
ND+ T + + G + A ++F V+ D + ++ G N +L +F +
Sbjct: 50 NDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHL 109
Query: 108 QRD-NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
++ +++PN T +SA S GR IH D ++G ++ MY +
Sbjct: 110 RKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWR 169
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLN 225
++ A +VF+ M E+D +N++I+G + +E++++FR++IN+ R T + +L
Sbjct: 170 VEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILP 229
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDH 285
A + + LG +I T+ GC + D+
Sbjct: 230 AVAELQELRLGMQIHSLATKT----------GC----------------------YSHDY 257
Query: 286 IMLG--SLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGK-------WK 336
++ G SL S C GK+++G + + R D Y + + Y S+G+ +K
Sbjct: 258 VLTGFISLYSKC---GKIKMGSALFREF---RKPDIVAYNAMIHGYTSNGETELSLSLFK 311
Query: 337 EAVQIRAKMKEAG-VQKEPGCSSIEVNNEIHEFILGD--IRHPQRE----QIYKKMQELK 389
E + A+++ + V P + + IH + L + H +Y K+ E++
Sbjct: 312 ELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIE 371
Query: 390 QIVKLEGYSP 399
KL SP
Sbjct: 372 SARKLFDESP 381
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 82/197 (41%), Gaps = 36/197 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H V S+ L+ +Y KCG +A +LFD M + N+V +T
Sbjct: 439 GKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNT------- 491
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
MI G +G+ AL++F EM + P VT +C
Sbjct: 492 -------------------------MISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLC 526
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVG--GALINMYSRCGDIDKALQVFEEMK- 178
VL ACS G ++ G I + M HR V ++++ R G + +ALQ E M
Sbjct: 527 VLYACSHAGLVKEGDEIFNSM-IHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSI 585
Query: 179 ERDVTTYNSLIAGLAMH 195
E + + +L+ +H
Sbjct: 586 EPGSSVWETLLGACRIH 602
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 197/443 (44%), Positives = 291/443 (65%), Gaps = 1/443 (0%)
Query: 46 ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
E NDVV + ++N Y + G V +A+++F R+ K+ V W A+I G ++G AL LF
Sbjct: 354 ESNDVVGNA-LVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFI 412
Query: 106 EMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG 165
EMQ ++P+ IV VL AC+ ALE G+ IH Y + + N +VG L+++Y++CG
Sbjct: 413 EMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCG 472
Query: 166 DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
+++ A ++FE M E+DV ++ ++I +HG +A+ +F +M G + + F +L
Sbjct: 473 NVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILT 532
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDH 285
ACSH GLVD G + FQ M DYG+ P++EHY C+VDLL R G +EA I NM + PD
Sbjct: 533 ACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDA 592
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
+ G+LL AC+IH ++LGEQ AK L + ++G YVLLSN YA + +W++ ++R M
Sbjct: 593 NVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMM 652
Query: 346 KEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVL 405
KE GV+K+PGCS + V+ ++ F++GD HPQ EQIY ++ L + ++ GY P+T + L
Sbjct: 653 KEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEILYEQMRKAGYVPNTNLAL 712
Query: 406 HDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRK 465
D+E+ KE L+ HSE+LAI +G+I+T P IR++KNLRVC+DCH+ K I+ I R+
Sbjct: 713 QDVEEEAKENILSSHSEKLAISFGIINTSPGIPIRIMKNLRVCSDCHNATKFISKIVGRE 772
Query: 466 IIVRDRNRFHHFENGTCSCGDYW 488
IIVRD NRFHH +NG CSCGDYW
Sbjct: 773 IIVRDANRFHHVKNGFCSCGDYW 795
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 191/390 (48%), Gaps = 51/390 (13%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPEC---NDVVASTVMINCYV 61
++ Q+ + G+ ++ L +++ G + + ++ +++ +DV+ T + + Y
Sbjct: 107 LYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYT 166
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G +ENA +VF R+ +D V W A+I G +NG+ AL LF EMQ + ++PN T+V
Sbjct: 167 KCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVS 226
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V+ C+ L ALE G+ IH Y + I+ + +V L+NMY++CG+++ A ++FE M RD
Sbjct: 227 VMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRD 286
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH------------ 229
V ++N++I G +++ + EA+ F M +GI+P +T V VL AC+H
Sbjct: 287 VASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHG 346
Query: 230 -----------------------GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRV 266
G V+ +++F+ M + + + I+ S+
Sbjct: 347 YAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKK-----NVVAWNAIISGYSQH 401
Query: 267 GRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV 323
G P EA M+ I PD + S+L AC L+ G+QI + RS V
Sbjct: 402 GHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTI--RSGFESNVV 459
Query: 324 L---LSNAYASSGKWKEAVQIRAKMKEAGV 350
+ L + YA G A ++ +M E V
Sbjct: 460 VGTGLVDIYAKCGNVNTAQKLFERMPEQDV 489
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 152/316 (48%), Gaps = 41/316 (12%)
Query: 73 FSRVKVKD-TVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGA 131
F++ +++ V W I G V+NG +AL L+ +MQR + P+++ + V+ AC
Sbjct: 76 FTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSD 135
Query: 132 LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAG 191
L+ GR +H + + + IVG AL +MY++CG ++ A QVF+ M +RDV ++N++IAG
Sbjct: 136 LQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAG 195
Query: 192 LAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEP 251
+ +G+ EA+ +F EM GI+P T V V+ C+H ++ G +I R GIE
Sbjct: 196 YSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRS-GIES 254
Query: 252 QIEHYGCIVDLLSRVG-------------------------------RPEEAYDFITNMK 280
+ +V++ ++ G + EA F M+
Sbjct: 255 DVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQ 314
Query: 281 ---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVL---LSNAYASSGK 334
I P+ I + S+L AC L+ G+QI + RS V+ L N YA G
Sbjct: 315 VRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAI--RSGFESNDVVGNALVNMYAKCGN 372
Query: 335 WKEAVQIRAKMKEAGV 350
A ++ +M + V
Sbjct: 373 VNSAYKLFERMPKKNV 388
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 11/218 (5%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G++IHG ++ G SN LV++Y KCG A +LF+ MPE DVV+ T MI Y
Sbjct: 441 QGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPE-QDVVSWTTMILAY 499
Query: 61 VEHGLVENAFEVFSRVKVK----DTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPN 115
HG E+A +FS+++ D + +TA++ G + + L F+ M+ D + P
Sbjct: 500 GIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPK 559
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
C++ + G L+ I M ++ + V GAL+ +I+ Q +
Sbjct: 560 LEHYACLVDLLGRAGHLDEANGIIKNMS---LEPDANVWGALLGACRIHCNIELGEQAAK 616
Query: 176 EMKERDVTT--YNSLIAGLAMHGRSIEAVEMFREMINQ 211
+ E D Y L++ + + E V R+M+ +
Sbjct: 617 HLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKE 654
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 202/483 (41%), Positives = 306/483 (63%), Gaps = 2/483 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H +K G + N L+ LYGK Q+FD M D V+ ++ V
Sbjct: 437 GKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRM-TVKDTVSYNSFMSALV 495
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ L + A +VF+ + D V WT +I + + A+++FR M + PN +
Sbjct: 496 QNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTI 555
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L LGA +LG+ IH+ K +D +V AL++MY +C D +L+VF+ M+ERD
Sbjct: 556 LLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSAD-SLKVFDSMEERD 614
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ T+N++I G A HG EA+ M++ M++ G+ P +VTFVG+L+ACSH GLVD G + F+
Sbjct: 615 IFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFK 674
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM+ DYG+ P +EHY C+VDLL R G + A FI +M I PD ++ +LL ACKIH +
Sbjct: 675 SMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNV 734
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++G + A++L +++G YV+LSN Y+S G W E ++R MKE GV K+PGCS +++
Sbjct: 735 EIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCSWMQI 794
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N++H F+ GD H Q + IY + EL ++K GY P T+ VLHDI++ +KE +L HS
Sbjct: 795 KNKMHSFVTGDEEHEQIQNIYATLWELYTLLKATGYVPDTDFVLHDIDEEQKESSLLYHS 854
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ YGL+ T I+++KNLR+C DCH+ IK ++++TKR+I VRD NRFHHF NG+
Sbjct: 855 EKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSSVTKREIDVRDGNRFHHFRNGS 914
Query: 482 CSC 484
CSC
Sbjct: 915 CSC 917
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 169/364 (46%), Gaps = 27/364 (7%)
Query: 20 TRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVK 79
+R ++ + G DA LFD++ E N VV+ MI Y+++ +V+ A ++F+R+ +
Sbjct: 323 SRTSMLTGLARYGRIDDAKILFDQIHEPN-VVSWNAMITGYMQNEMVDEAEDLFNRMPFR 381
Query: 80 DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIH 139
+T+ W MI G RNG +AL + + R + P+ ++ ACS + ALE G+ +H
Sbjct: 382 NTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVH 441
Query: 140 SYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSI 199
S K N V ALI +Y + I Q+F+ M +D +YNS ++ L +
Sbjct: 442 SLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFD 501
Query: 200 EAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI 259
EA ++F M + P V++ +++AC+ + EIF+SM + + P +
Sbjct: 502 EARDVFNNMPS----PDVVSWTTIISACAQADQGNEAVEIFRSMLHEREL-PNPPILTIL 556
Query: 260 VDLLSRVGRPEEAYDFIT-NMKIAPDHIM-----LGSLLSACKIHGKLQLGEQIAKRLLD 313
+ L +G P+ T +K+ D + L S+ C L++ + + +R
Sbjct: 557 LGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSADSLKVFDSMEER--- 613
Query: 314 CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP--------GCSSIEVNNEI 365
D T+ + YA G +EA+++ M AGV CS + +E
Sbjct: 614 ----DIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEG 669
Query: 366 HEFI 369
H+F
Sbjct: 670 HQFF 673
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 126/259 (48%), Gaps = 11/259 (4%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
+V Y + G+ A +LFD MP DV + M+ Y L+E A +F R+ ++ V
Sbjct: 132 MVTCYVQNGDITLARKLFDAMPS-RDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVS 190
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
WT MI G V + RA D+FR M + + P + +V VLSA LG + IH +
Sbjct: 191 WTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVH 250
Query: 144 KHRIDLNHIVGGALINMYSR-CGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAV 202
K + + +VG A++N Y++ +D A++ FE M R+ T++++IA L+ GR +A
Sbjct: 251 KTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAF 310
Query: 203 EMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDL 262
+++ + + P++ + +L + G +D +F + EP + + ++
Sbjct: 311 AVYQRDPLKSV-PSRTS---MLTGLARYGRIDDAKILFDQIH-----EPNVVSWNAMITG 361
Query: 263 LSRVGRPEEAYDFITNMKI 281
+ +EA D M
Sbjct: 362 YMQNEMVDEAEDLFNRMPF 380
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 18/219 (8%)
Query: 16 SNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSR 75
S +S R++ EL G+ G +A ++FD MP D++A MI Y +G+ + +
Sbjct: 34 SAQSARIR--EL-GRLGRLHEAREVFDSMP-FRDIIAWNSMIFAYCNNGMPDAGRSLADA 89
Query: 76 VKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELG 135
+ + T ++ G R G + A +F M N + C + Q G + L
Sbjct: 90 ISGGNLRTGTILLSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYV----QNGDITLA 145
Query: 136 RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAM- 194
R + M + ++ Y +++A +FE M ER+ ++ +I+G +
Sbjct: 146 RKLFDAMPSRDVS----SWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLI 201
Query: 195 --HGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
HGR A +MFR M+ +G+ P + V VL+A H G
Sbjct: 202 EQHGR---AWDMFRTMLCEGMTPEQPNLVSVLSAVRHLG 237
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 144/357 (40%), Gaps = 57/357 (15%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKD-AMQLFDEMPECNDVVASTVMINCYVEH 63
IH V K G + ++ Y K D A++ F+ M N+ ST+ I +
Sbjct: 245 IHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTI-IAALSQA 303
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
G +++AF V+ R +K T+M+ GL R G + A LF ++ NV
Sbjct: 304 GRIDDAFAVYQRDPLKSVPSRTSMLTGLARYGRIDDAKILFDQIHEPNV----------- 352
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
+ A+I Y + +D+A +F M R+
Sbjct: 353 ----------------------------VSWNAMITGYMQNEMVDEAEDLFNRMPFRNTI 384
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
++ +IAG A +GRS +A+ + + +G+ P+ + ACS+ ++ G ++ S+
Sbjct: 385 SWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQV-HSL 443
Query: 244 TRDYGIEPQIEHYGC--IVDLLSR---VGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
G Q Y C ++ L + +G + +D +T D + S +SA +
Sbjct: 444 AVKAGC--QFNSYVCNALITLYGKYRSIGSVRQIFDRMT----VKDTVSYNSFMSALVQN 497
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQI-RAKMKEAGVQKEP 354
+ + S D ++ + +A A + + EAV+I R+ + E + P
Sbjct: 498 NLFDEARDVFNNM---PSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPP 551
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/491 (43%), Positives = 317/491 (64%), Gaps = 3/491 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMI 57
E ++ +L+ GLR + ++++ + G+ + + M EC +V +T ++
Sbjct: 188 EAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLV 247
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y + G +E A VF + KD VCW+AMI G NG A++LF EM++ NVRP+
Sbjct: 248 DMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCY 307
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+V LS+C+ LGALELG W M N ++G +LI+ Y++CG +++AL V++ M
Sbjct: 308 AMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMM 367
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
KE+D +N++I+GLAM+G+ A +F +M GI P + TFVG+L C+H GLVD G
Sbjct: 368 KEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGR 427
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F SM+ D+ + P IEHYGC+VDLL+R G +EA++ I M + + I+ GSLL C++
Sbjct: 428 HYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRL 487
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
H + QL E + K+L++ +SG YVLLSN Y++S +W EA +IR+ + E G+QK PG S
Sbjct: 488 HRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYS 547
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
+EV+ +HEF++GD HP ++IY+K++ L + +K GY+P+TE VL D+E+ EKE L
Sbjct: 548 WVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKEAGYNPTTEFVLFDVEEEEKEHFL 607
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LA+ + LIST IRVVKNLRVC DCH IK I+ +T R+I++RD NRFH F
Sbjct: 608 GCHSEKLAVAFALISTGAKYVIRVVKNLRVCGDCHEAIKHISKVTGREIVIRDNNRFHCF 667
Query: 478 ENGTCSCGDYW 488
+G CSC DYW
Sbjct: 668 SDGACSCRDYW 678
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 193/392 (49%), Gaps = 29/392 (7%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV T ++ Y + G + +A++VF + VK+ V WT MI G + G+ A+DLFR +
Sbjct: 138 DVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLL 197
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+RP+ IV VL AC++LG LE GRWI M + + N V +L++MY++CG ++
Sbjct: 198 ESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSME 257
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+A VF+ M E+D+ ++++I G A +G EA+E+F EM +RP VG L++C+
Sbjct: 258 EARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCA 317
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
G ++LG M + + + ++D ++ G EEA MK D ++
Sbjct: 318 SLGALELGNWAKGLMNYEEFLSNPVLGTS-LIDFYAKCGSMEEALGVYKMMK-EKDRVVF 375
Query: 289 GSLLSACKIHGKL--------QLGE--------QIAKRLLDCRSA---DSGTYVL--LSN 327
+++S ++G++ Q+G+ L C A D G + +S+
Sbjct: 376 NAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSH 435
Query: 328 AYASSGKWKEAVQIRAKMKEAGVQKEP----GCSSIEVNNEIHEFILGDIRHPQREQIYK 383
++ + + + + AG E ++ N + +LG R + Q+ +
Sbjct: 436 DFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAE 495
Query: 384 KMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
+ LKQ+++LE ++ V+L +I + W
Sbjct: 496 HV--LKQLIELEPWNSGHYVLLSNIYSASRRW 525
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 137/305 (44%), Gaps = 38/305 (12%)
Query: 79 KDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWI 138
+T + MI G+V A+ L+ M + + P+ T VL AC++L LG I
Sbjct: 67 SNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMI 126
Query: 139 HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRS 198
HS + K D + V ++ YS+CG + A +VF++M ++V ++ +I G G+
Sbjct: 127 HSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKF 186
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGC 258
EAV++FR ++ G+RP V VL AC+ G ++ G I + M R+ G+ +
Sbjct: 187 REAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCM-RECGLSRNVFVATS 245
Query: 259 IVDLLSRVGR-------------------------------PEEAYDFITNMK---IAPD 284
+VD+ ++ G P EA + M+ + PD
Sbjct: 246 LVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPD 305
Query: 285 HIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLS--NAYASSGKWKEAVQIR 342
+ LS+C G L+LG AK L++ S + S + YA G +EA+ +
Sbjct: 306 CYAMVGALSSCASLGALELGNW-AKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVY 364
Query: 343 AKMKE 347
MKE
Sbjct: 365 KMMKE 369
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/489 (44%), Positives = 305/489 (62%), Gaps = 33/489 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR++H +KLGL N L+ +Y C E ++C
Sbjct: 139 EGRQLHCLAIKLGLSENVYVCPTLINMYTACNE-----------------------MDC- 174
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
A VF ++ V + AMI G R AL LFRE+Q N++P +VT++
Sbjct: 175 --------ARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTML 226
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLS+C+ LGAL+LG+W+H Y+ K+ + V ALI+MY++CG +D A+ VFE M R
Sbjct: 227 SVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVR 286
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++++I A+HG ++AV +F+EM G P ++TF+G+L ACSH GLV+ GFE F
Sbjct: 287 DTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYF 346
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
M YG+ P I+HYGC+VDLL R GR EEAY+FI + I P I+ +LLSAC HG
Sbjct: 347 YGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGN 406
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++LG+++ +++ + + G Y++LSN A +G+W++ +R M E GV K PGCSS+E
Sbjct: 407 VELGKRVIEQIFELDDSHGGDYIILSNLCARAGRWEDVNYVRKLMNERGVVKIPGCSSVE 466
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH-DIEDWEKEWALAI 419
VNN +HEF GD H ++++ + EL + +KL GY P+T +V H D+ED EKE L
Sbjct: 467 VNNVVHEFFSGDGVHSVSTKLHQALDELVKELKLVGYVPNTSLVFHADMEDEEKEVTLRY 526
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GL++T P TTIRVVKNLRVC DCHS KLI+ I R+II+RD RFHHF++
Sbjct: 527 HSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHSAAKLISLIFDRQIILRDVQRFHHFKD 586
Query: 480 GTCSCGDYW 488
G CSC DYW
Sbjct: 587 GKCSCEDYW 595
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 125/234 (53%), Gaps = 2/234 (0%)
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
+++A +F ++ D V + M G R RA LF ++ + P++ T +L A
Sbjct: 71 MQHAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKA 130
Query: 126 CSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTY 185
C+ ALE GR +H K + N V LINMY+ C ++D A +VF+++ E V TY
Sbjct: 131 CASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTY 190
Query: 186 NSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR 245
N++I G A R EA+ +FRE+ + ++PT VT + VL++C+ G +DLG + + + +
Sbjct: 191 NAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKK 250
Query: 246 DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+ G ++ ++D+ ++ G ++A NM + D +++ A IHG
Sbjct: 251 N-GFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVR-DTQAWSAMIMAYAIHG 302
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/495 (42%), Positives = 315/495 (63%), Gaps = 13/495 (2%)
Query: 2 GREIHGQ-VLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
GR+IHGQ +L G + ++++Y KCG + ++FDEMP DV++ T +I+ Y
Sbjct: 165 GRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPN-RDVISWTELISAY 223
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V+ G +E+A E+F + VKD V WT M+ G +N + A+ F +MQ V +E+T++
Sbjct: 224 VKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLI 283
Query: 121 CVLSACSQLGALELGRWIHS------YMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
V+SAC+QLGA + WI + GKH + +VG ALI+MYS+CG + A +VF
Sbjct: 284 GVISACAQLGAAKYADWIRDVAEKSEFGGKHSV----VVGSALIDMYSKCGSVGDAYRVF 339
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
+ MKER+V +Y+S+I G AMHGR +A+++F EM+ I+P +VTF+GVL ACSH G+V+
Sbjct: 340 QGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVE 399
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
G++IF+ M + YGI+P +HY C+VDLL R GR +EA++ + M I P + G+LL A
Sbjct: 400 QGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGA 459
Query: 295 CKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
C+IH + A L + G Y+LL+N YAS G+W + +R M+ G++K P
Sbjct: 460 CRIHKSPDIAAIAANHLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKNP 519
Query: 355 GCSSIEV-NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEK 413
S IE +HEF GD+ HP+ +I + +++L ++ +GY P V +D+ D +K
Sbjct: 520 AFSWIESEKGMVHEFFSGDMTHPRSGEIKQALEDLLDRLEAKGYQPHLSSVSYDVNDEDK 579
Query: 414 EWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNR 473
L HSE+LA+ +GLIST P + IR+VKNLR+C DCHS+I + IT R+IIVRD R
Sbjct: 580 RRILMTHSEKLALAFGLISTIPGSKIRIVKNLRICEDCHSVICGASQITGREIIVRDIMR 639
Query: 474 FHHFENGTCSCGDYW 488
FHHF +G CSCG++W
Sbjct: 640 FHHFHDGICSCGNFW 654
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 103/243 (42%), Gaps = 15/243 (6%)
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG-DIDK-ALQV 173
E IV L C L + + +H+ + + +D + V LI ++ +D L +
Sbjct: 46 ESQIVTTLDGCKNLTQI---KQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSI 102
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV 233
F ++ + YN+LI G + R E+ E + M +G+ P TF + AC V
Sbjct: 103 FNQVNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDV 162
Query: 234 DLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE---EAYDFITNMKIAPDHIMLGS 290
LG +I G + ++D+ + G E + +D + N D I
Sbjct: 163 GLGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNR----DVISWTE 218
Query: 291 LLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
L+SA G ++ ++ L D + ++ + +A + K +EA+ KM+E GV
Sbjct: 219 LISAYVKSGNMESAGELFDGL---PVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGV 275
Query: 351 QKE 353
+ +
Sbjct: 276 ETD 278
>gi|125546238|gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
Length = 602
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/433 (46%), Positives = 296/433 (68%), Gaps = 1/433 (0%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
M +C+ G + +A VF R+ + V W+AMI G VR G + A++LFREMQ + V+ +
Sbjct: 171 MYSCF-GGGFLGDARNVFDRMPKESAVTWSAMIGGYVRGGLSSDAVELFREMQANGVQAD 229
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
EVT++ VL+A + LGALEL RW+ ++ + I + + ALI+ ++CGD+D A+ VFE
Sbjct: 230 EVTVIGVLAAATDLGALELARWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFE 289
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
M++R V ++ S+I LAM GR EAV +F EM G+ P V F+GVL ACSH G+VD
Sbjct: 290 GMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLTACSHAGMVDE 349
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G F +M +YGIEP+IEHYGC+VD+ R G E A +F+ M I P+ ++ SL+SAC
Sbjct: 350 GCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQPNPVIWRSLVSAC 409
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
+ HG+L+LGE I + LL A Y++LSN +A + +WKE +IR +M + G++K PG
Sbjct: 410 RAHGRLELGESITRSLLHEYPAHEANYIMLSNVFALTQRWKEKSEIRREMSKRGIKKVPG 469
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
CS +E++ E+HEFI GD HPQ + IY+ ++E+ + ++ G+ +T VL D+++ +KE
Sbjct: 470 CSIVELDGEVHEFIAGDESHPQYKDIYRMVEEMARELRRVGHIAATSEVLLDLDEEDKEG 529
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
AL HSE+LAI + L+ T P T +RVVKNLRVC+DCH+ IK I+ + +R+I+VRDR+RFH
Sbjct: 530 ALQWHSEKLAIAFALLRTPPGTQVRVVKNLRVCSDCHAAIKCISQVYRREIVVRDRSRFH 589
Query: 476 HFENGTCSCGDYW 488
F++G+CSC D+W
Sbjct: 590 RFKDGSCSCKDFW 602
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 121/259 (46%), Gaps = 41/259 (15%)
Query: 99 RALDLFREMQRDNVRPNEVTIVCVLSACSQL-GALELGRWIHSYMGKHRIDLNHIVGGAL 157
RA F M R V PN+ T +L AC+ L G+ ++G H+ K + V L
Sbjct: 109 RAAAFFPLMLRGAVVPNKFTFPFLLKACAALPGSPDVGLQAHAAALKFGFATDQYVSNTL 168
Query: 158 INMYSRC---GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIR 214
I+MYS C G + A VF+ M + T++++I G G S +AVE+FREM G++
Sbjct: 169 IHMYS-CFGGGFLGDARNVFDRMPKESAVTWSAMIGGYVRGGLSSDAVELFREMQANGVQ 227
Query: 215 PTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYD 274
+VT +GVL A + G ++L + + + R+ GI + ++D L++ G
Sbjct: 228 ADEVTVIGVLAAATDLGALELARWVRRFVERE-GIGKSVTLCNALIDTLAKCG------- 279
Query: 275 FITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGK 334
+ G + + E + + RS S T V+ +A A G+
Sbjct: 280 ---------------------DVDGAVAVFEGMQQ-----RSVVSWTSVI--DALAMEGR 311
Query: 335 WKEAVQIRAKMKEAGVQKE 353
KEAV++ +MK AGV +
Sbjct: 312 GKEAVRVFEEMKVAGVPPD 330
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/521 (42%), Positives = 318/521 (61%), Gaps = 35/521 (6%)
Query: 2 GREIHGQVLKLGLRS-NRSTRLKLVELYGK--CGEFKDAMQLFDEMPECNDVVASTVMIN 58
G +H + L+ G + + R LVE+Y K GE A FDE P DV VM+
Sbjct: 66 GASLHARALRSGFAAADLFVRTALVEMYAKTAAGEIALARAAFDEAPR-RDVFLCNVMLA 124
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGE--MAR----------------- 99
YV G V A +VF + +D V W MI G G+ MAR
Sbjct: 125 AYVARGEVAEARKVFDGMSGRDLVSWNTMIHGYAVRGDVGMAREIFDGTRDRDAFSWSSM 184
Query: 100 ------------ALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRI 147
AL+L+REM+ V P+ +++V VLSACS +GAL +G +H ++ +R+
Sbjct: 185 ISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEVHRFVESNRV 244
Query: 148 DLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
+++ +G AL++MY++CGDI+ +L+VF M +DV T++S+I GLA HG +A+ +F E
Sbjct: 245 EVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGLGHDALSLFSE 304
Query: 208 MINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
MI+QG++P ++TF+GVL AC+H GLV+ G + F SM+ +G+ P++EHYGC+VDLL R G
Sbjct: 305 MISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYGCMVDLLGRAG 364
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSN 327
EEA + I +M PD I+ +LL AC+IH +++ E+ +L G YVLLSN
Sbjct: 365 HVEEAMELIRSMTFKPDPIIWRTLLGACRIHKNVEIAEEAMAKLKVLDPLADGHYVLLSN 424
Query: 328 AYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQE 387
YA + W+ ++R ++ +Q+ PG SSIE N +HEF+ GD HP+ E+IYK ++E
Sbjct: 425 IYAQANSWEGVAEMRKTIRRENIQRVPGRSSIEWENTVHEFVSGDRSHPRIEEIYKMLEE 484
Query: 388 LKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRV 447
+ ++ GY P T +VL DI++ K+ ALA HSE+LAI +GL+ T +T+R+ KNLR
Sbjct: 485 MMDRLRQAGYRPMTSLVLQDIDEQSKKRALAEHSEKLAIAFGLLVTPARSTLRITKNLRA 544
Query: 448 CNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
C DCHS IKLI+ RK+IVRDRNRFHHF G CSC DYW
Sbjct: 545 CEDCHSAIKLISLAYDRKLIVRDRNRFHHFSEGQCSCKDYW 585
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/492 (43%), Positives = 308/492 (62%), Gaps = 37/492 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR H +VLK G S+ L++ Y CG F A +FDE STV
Sbjct: 130 GRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDE---------STV------ 174
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR-DNVRPNEVTIV 120
+D V W MI+ + G +A DL EM + DN+RP+EVT+V
Sbjct: 175 -----------------RDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMV 217
Query: 121 CVLSACSQLGALELGRWIHSY---MGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
++ AC+QLG LE G+++HSY + K I+ + ++ AL++MY++CG ID ALQVF M
Sbjct: 218 SLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRM 277
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
+ R+V T+N+LI GLAMHG +A+ +F +M + + P VTF+ +L ACSH GLVD G
Sbjct: 278 RVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGL 337
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
+FQ+M + IEP++EHYGC+VDLL R + ++A FI NM I + ++ +LL AC+
Sbjct: 338 AMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRS 397
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
G L E+I +R+++ G YV+LSN YA +W A+++R +MK G++K PGCS
Sbjct: 398 GGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCS 457
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLE-GYSPSTEVVLHDIEDWEKEWA 416
IE+N IH+F+ GD H Q EQIY ++E+ + V L+ G+ P T VL DIE+ EKE +
Sbjct: 458 WIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHS 517
Query: 417 LAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHH 476
L +HSE+LAI GLIST + IR+VKNLRVCNDCHS +K+ + + R+I+ RDR+RFHH
Sbjct: 518 LFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHH 577
Query: 477 FENGTCSCGDYW 488
F+ G+CSC D+W
Sbjct: 578 FKEGSCSCMDFW 589
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 146/316 (46%), Gaps = 15/316 (4%)
Query: 48 NDVVASTVMINCYVEH-GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
N + +S ++ + H G + A ++F++++ D MI G R+ A+ L+
Sbjct: 42 NPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYF 101
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M V + T VL+AC++LGA++LGR H + K+ + V ALI Y CG
Sbjct: 102 MVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGS 161
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN-QGIRPTKVTFVGVLN 225
A VF+E RDV T+N +I G S +A ++ EM +RP +VT V ++
Sbjct: 162 FGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVP 221
Query: 226 ACSHGGLVDLGFEIFQSMTRD---YGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIA 282
AC+ G ++ G + S +++ + I + +VD+ ++ G + A M++
Sbjct: 222 ACAQLGNLERG-KFLHSYSKELDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVR 280
Query: 283 PDHIMLGSLLSACKIHG----KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEA 338
+ +L+ +HG + L +Q+ D D T++ L A + +G E
Sbjct: 281 -NVFTWNALIGGLAMHGHGEDAISLFDQMEH---DKLMPDDVTFIALLCACSHAGLVDEG 336
Query: 339 VQIRAKMKEAGVQKEP 354
+ + MK Q EP
Sbjct: 337 LAMFQAMKNK-FQIEP 351
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/452 (46%), Positives = 293/452 (64%), Gaps = 1/452 (0%)
Query: 37 AMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGE 96
A +LF+ MP C ++ + MI Y + G + A + F + +D V W A+I G ++G
Sbjct: 316 ARELFESMP-CRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGH 374
Query: 97 MARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGA 156
AL++F E+++D N T C LS C+ + ALELG+ IH K VG A
Sbjct: 375 YEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNA 434
Query: 157 LINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPT 216
L+ MY +CG ID+A FE ++E+DV ++N+++AG A HG +A+ +F M G++P
Sbjct: 435 LLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPD 494
Query: 217 KVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFI 276
++T VGVL+ACSH GL+D G E F SMT+DYG+ P +HY C++DLL R GR EEA D I
Sbjct: 495 EITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLI 554
Query: 277 TNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWK 336
NM P G+LL A +IHG +LGE+ A+ + +SG YVLLSN YA+SG+W
Sbjct: 555 RNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWV 614
Query: 337 EAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEG 396
+A ++R+KM++ GVQK PG S +EV N+IH F +GD HP++E+IY ++EL ++ EG
Sbjct: 615 DADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEG 674
Query: 397 YSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIK 456
Y T++VLHD+E+ EKE L HSE+LA+ +G+++ IRV+KNLRVC DCHS IK
Sbjct: 675 YVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIK 734
Query: 457 LIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
I+ I R II+RD +RFHHF G CSCGDYW
Sbjct: 735 HISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 136/302 (45%), Gaps = 44/302 (14%)
Query: 36 DAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNG 95
DA +LFD MPE DVV+ +++ Y ++G V+ A EVF + K+++ W ++ V NG
Sbjct: 129 DARRLFDLMPE-KDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNG 187
Query: 96 EMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG-KHRIDLNHIVG 154
+ A LF ++ ++ C++ + L RW+ M + I N ++
Sbjct: 188 RIEEACLLFESKSDWDL----ISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMIS 243
Query: 155 GALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIR 214
G Y++ G + +A ++F+E RDV T+ ++++G +G EA F EM +
Sbjct: 244 G-----YAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK--- 295
Query: 215 PTKVTFVGVLNACSHGGLVDLGFEIFQSMT------------------------RDYGIE 250
+V++ ++ +D+ E+F+SM + + +
Sbjct: 296 -NEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMM 354
Query: 251 PQIE--HYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI---MLGSLLSACKIHGKLQLGE 305
PQ + + I+ ++ G EEA + +K + + G LS C L+LG+
Sbjct: 355 PQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGK 414
Query: 306 QI 307
QI
Sbjct: 415 QI 416
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 38/252 (15%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G++IHGQ +K+G + L+ +Y KCG +A F+ + E DVV+ M+ Y
Sbjct: 413 GKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEE-KDVVSWNTMLAGYA 471
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG F R +AL +F M+ V+P+E+T+V
Sbjct: 472 RHG--------FGR-----------------------QALTVFESMKTAGVKPDEITMVG 500
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VLSACS G L+ G + +S + + +I++ R G +++A + M +
Sbjct: 501 VLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQ 560
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA-CSHGGLVDLGFE 238
++ +L+ +HG + E E EM+ + +V + N + G VD +
Sbjct: 561 PGAASWGALLGASRIHGNT-ELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDA--D 617
Query: 239 IFQSMTRDYGIE 250
+S RD G++
Sbjct: 618 KMRSKMRDIGVQ 629
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 126/300 (42%), Gaps = 54/300 (18%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D++ I+ ++ +G ++A VF+ + + +V + AMI G +RN + A +LF +M
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
++ V + + C R GD
Sbjct: 108 ERDLFSWNVMLTGYVRNC------------------------------------RLGD-- 129
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A ++F+ M E+DV ++NSL++G A +G EA E+F M + +++ G+L A
Sbjct: 130 -ARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNGLLAAYV 184
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H G ++ +F+S + + + + C++ R + +A M + D I
Sbjct: 185 HNGRIEEACLLFESKS-----DWDLISWNCLMGGFVRKKKLGDARWLFDKMPVR-DAISW 238
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLD-CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+++S G L A+RL D + D T+ + + Y +G EA +M E
Sbjct: 239 NTMISGYAQGGGLSQ----ARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPE 294
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/488 (42%), Positives = 306/488 (62%), Gaps = 30/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG++IH VLK G ++ + L+ +Y + A ++FD MP+
Sbjct: 112 EGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQ-------------- 157
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ +++V W AMI V++ + A LF M+ +NV ++
Sbjct: 158 ----------------RDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAA 201
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+LSAC+ LGALE G+WIH Y+ K I+L+ + +I+MY +CG ++KA +VF E+ ++
Sbjct: 202 SMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQK 261
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
++++N +I GLAMHG+ A+E+F+EM + + P +TFV VL+AC+H GLV+ G F
Sbjct: 262 GISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYF 321
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
Q MT G++P +EH+GC+VDLL R G EEA I M + PD +LG+L+ AC+IHG
Sbjct: 322 QYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGN 381
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+LGEQI K++++ +SG YVLL+N YAS+G+W++ ++R M + GV+K PG S IE
Sbjct: 382 TELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIE 441
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+ + EFI G HPQ ++IY K+ E+ + ++ GY P T+ VLHDI++ EKE L H
Sbjct: 442 SESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYH 501
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI +GL+ TKP T+R+ KNLR+C DCH KLI+ + R+II+RDRNRFHHF G
Sbjct: 502 SEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMG 561
Query: 481 TCSCGDYW 488
CSC DYW
Sbjct: 562 GCSCKDYW 569
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 118/250 (47%), Gaps = 9/250 (3%)
Query: 103 LFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYS 162
++ M +V PN+ T ++ AC A+E G+ IH+++ K + LI+MY
Sbjct: 81 MYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYV 140
Query: 163 RCGDIDKALQVFEEMKERD--VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTF 220
+++A +VF+ M +RD ++N++IA R EA +F M + + K
Sbjct: 141 NFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVA 200
Query: 221 VGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG---RPEEAYDFIT 277
+L+AC+ G ++ G I + + GIE + ++D+ + G + E ++ +
Sbjct: 201 ASMLSACTGLGALEQGKWIHGYIEKS-GIELDSKLATTVIDMYCKCGCLEKASEVFNELP 259
Query: 278 NMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKE 337
I+ + M+G L K ++L +++ + ++ + D T+V + +A A SG +E
Sbjct: 260 QKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMV---APDGITFVNVLSACAHSGLVEE 316
Query: 338 AVQIRAKMKE 347
M E
Sbjct: 317 GKHYFQYMTE 326
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/452 (46%), Positives = 293/452 (64%), Gaps = 1/452 (0%)
Query: 37 AMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGE 96
A +LF+ MP C ++ + MI Y + G + A + F + +D V W A+I G ++G
Sbjct: 316 ARELFESMP-CRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGH 374
Query: 97 MARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGA 156
AL++F E+++D N T C LS C+ + ALELG+ IH K VG A
Sbjct: 375 YEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNA 434
Query: 157 LINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPT 216
L+ MY +CG ID+A FE ++E+DV ++N+++AG A HG +A+ +F M G++P
Sbjct: 435 LLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPD 494
Query: 217 KVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFI 276
++T VGVL+ACSH GL+D G E F SMT+DYG+ P +HY C++DLL R GR EEA D I
Sbjct: 495 EITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLI 554
Query: 277 TNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWK 336
NM P G+LL A +IHG +LGE+ A+ + +SG YVLLSN YA+SG+W
Sbjct: 555 RNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWV 614
Query: 337 EAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEG 396
+A ++R+KM++ GVQK PG S +EV N+IH F +GD HP++E+IY ++EL ++ EG
Sbjct: 615 DADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEG 674
Query: 397 YSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIK 456
Y T++VLHD+E+ EKE L HSE+LA+ +G+++ IRV+KNLRVC DCHS IK
Sbjct: 675 YVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIK 734
Query: 457 LIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
I+ I R II+RD +RFHHF G CSCGDYW
Sbjct: 735 HISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 118/261 (45%), Gaps = 57/261 (21%)
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
+ GL+D G E F M +Y + P +HY C++DLL RV R EE
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE----------------- 818
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
G+LL A +IHG +LGE+ A+ +SG +KM++
Sbjct: 819 GALLGASRIHGNTELGEKAAQMFFKMGPQNSGI---------------------SKMRDV 857
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
GVQK PG S EV N+IH F +G +RE I ++EL +K+ E L +
Sbjct: 858 GVQKVPGYSWFEVQNKIHTFSVGLFLSRERENI-GFLEELD--LKMREREEEKERTLKYL 914
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKN-LRVCNDCHSMIKLIANITKRKII 467
SE LA G+++ RV+K + VC DC S IK ++ I R I
Sbjct: 915 ------------SENLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIVGRLIT 962
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
+RD H F CSCG+YW
Sbjct: 963 LRDS---HRFNESICSCGEYW 980
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 136/302 (45%), Gaps = 44/302 (14%)
Query: 36 DAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNG 95
DA +LFD MPE DVV+ +++ Y ++G V+ A EVF + K+++ W ++ V NG
Sbjct: 129 DARRLFDLMPE-KDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNG 187
Query: 96 EMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG-KHRIDLNHIVG 154
+ A LF ++ ++ C++ + L RW+ M + I N ++
Sbjct: 188 RIEEACLLFESKSDWDL----ISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMIS 243
Query: 155 GALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIR 214
G Y++ G + +A ++F+E RDV T+ ++++G +G EA F EM +
Sbjct: 244 G-----YAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK--- 295
Query: 215 PTKVTFVGVLNACSHGGLVDLGFEIFQSMT------------------------RDYGIE 250
+V++ ++ +D+ E+F+SM + + +
Sbjct: 296 -NEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMM 354
Query: 251 PQIE--HYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI---MLGSLLSACKIHGKLQLGE 305
PQ + + I+ ++ G EEA + +K + + G LS C L+LG+
Sbjct: 355 PQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGK 414
Query: 306 QI 307
QI
Sbjct: 415 QI 416
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 38/252 (15%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G++IHGQ +K+G + L+ +Y KCG +A F+ + E DVV+ M+ Y
Sbjct: 413 GKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEE-KDVVSWNTMLAGYA 471
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG F R +AL +F M+ V+P+E+T+V
Sbjct: 472 RHG--------FGR-----------------------QALTVFESMKTAGVKPDEITMVG 500
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VLSACS G L+ G + +S + + +I++ R G +++A + M +
Sbjct: 501 VLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQ 560
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA-CSHGGLVDLGFE 238
++ +L+ +HG + E E EM+ + +V + N + G VD +
Sbjct: 561 PGAASWGALLGASRIHGNT-ELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDA--D 617
Query: 239 IFQSMTRDYGIE 250
+S RD G++
Sbjct: 618 KMRSKMRDIGVQ 629
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 126/300 (42%), Gaps = 54/300 (18%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D++ I+ ++ +G ++A VF+ + + +V + AMI G +RN + A +LF +M
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
++ V + + C R GD
Sbjct: 108 ERDLFSWNVMLTGYVRNC------------------------------------RLGD-- 129
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A ++F+ M E+DV ++NSL++G A +G EA E+F M + +++ G+L A
Sbjct: 130 -ARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNGLLAAYV 184
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H G ++ +F+S + + + + C++ R + +A M + D I
Sbjct: 185 HNGRIEEACLLFESKS-----DWDLISWNCLMGGFVRKKKLGDARWLFDKMPVR-DAISW 238
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLD-CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+++S G L A+RL D + D T+ + + Y +G EA +M E
Sbjct: 239 NTMISGYAQGGGLSQ----ARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPE 294
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/551 (40%), Positives = 334/551 (60%), Gaps = 64/551 (11%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEF------------KD------------ 36
EG++IHG VLK+G ++ LV +Y KCGE KD
Sbjct: 132 EGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYA 191
Query: 37 -------AMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMID 89
A+++F+EMPE D + T++I+ + G +E A +VF R+ ++++V W AMI+
Sbjct: 192 RCGEIELALEMFEEMPE-KDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVSWNAMIN 250
Query: 90 GLV-------------------------------RNGEMARALDLFREMQRDNVRPNEVT 118
G + RN + +AL LF M R+++ PN T
Sbjct: 251 GYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTT 310
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
I+ +SA S + +L GRW+HSY+ K + ++G LI MYS+CG + AL+VF +
Sbjct: 311 ILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIP 370
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
++ + + S+I GL MHG + +E+F EM G++P +TF+GVLNACSH G +
Sbjct: 371 KKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHR 430
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
F+ MT DYGI+P IEHYGC++D+L R G EEA D I M I + ++ SLLS + H
Sbjct: 431 YFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKH 490
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
G +++GE A+ L+D +G YV+LSN YA++G W++ Q+R MK+ G++K+PGCSS
Sbjct: 491 GNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPGCSS 550
Query: 359 IEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSP-STEVVLHDIEDWEKEWAL 417
IE IHEFI+GD HPQ E+IY K+ E+K+ + + G+ P +T+V+L ED EKE L
Sbjct: 551 IEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEEDNEKEAEL 610
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSERLAI +GL++ K + IR++KNLR+CNDCH++ KL+++I R+II+RD +RFHHF
Sbjct: 611 ETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDGSRFHHF 670
Query: 478 ENGTCSCGDYW 488
++G+CSC D+W
Sbjct: 671 KSGSCSCKDFW 681
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 115/220 (52%), Gaps = 14/220 (6%)
Query: 31 CGEFKDAMQLFD---EMPECNDVVASTVMINCYVEHGL--VENAFEVFSRVKVKDTVCWT 85
CG ++A QL + N S+ ++ Y + + ++ A +F ++ V W
Sbjct: 25 CGTEREANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWN 84
Query: 86 AMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKH 145
+I + N A+ LF ++ D V P+ T+ CVL C++LGAL+ G+ IH + K
Sbjct: 85 LLIKCYIENQRSNDAIALFCKLLCDFV-PDSFTLPCVLKGCARLGALQEGKQIHGLVLKI 143
Query: 146 RIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMF 205
++ V +L++MYS+CG+I+ +VF+ M+++DV ++NSLI G A G A+EMF
Sbjct: 144 GFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMF 203
Query: 206 REMINQGIRPTKVTFVG--VLNACSHGGLVDLGFEIFQSM 243
EM P K +F +++ S G ++ ++F M
Sbjct: 204 EEM------PEKDSFSWTILIDGLSKSGKLEAARDVFDRM 237
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/489 (41%), Positives = 299/489 (61%), Gaps = 33/489 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+EIHG ++ G + L+++Y KC + +++ F +P
Sbjct: 245 KGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPR-------------- 290
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
KD + W ++I G V+NGE R L FR M ++NV+P V+
Sbjct: 291 ------------------KDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFS 332
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+ AC+ L AL LGR +H + + D N + +L++MY++CG+I A VF+ + +R
Sbjct: 333 SVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKR 392
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D+ + ++I G AMHG +++AV +F M+ G+RP V F+ VL ACSH GLVD G+ F
Sbjct: 393 DMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYF 452
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK-IAPDHIMLGSLLSACKIHG 299
SM RD+GI P +EHY + DLL R GR EEAYDFI+NM+ + P + LL+AC+ H
Sbjct: 453 NSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHK 512
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
++L E++ +LL S + G YVL+SN Y+++ +WK+A ++R M++ G++K P CS I
Sbjct: 513 SVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARLRIHMRKKGLKKTPACSWI 572
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
EV N++H F+ GD HP ++I K + L + ++ EGY T VLHD+++ K L
Sbjct: 573 EVGNQVHTFMAGDKSHPYYDKINKALDVLLEQMEKEGYVIDTNQVLHDVDEELKRELLHN 632
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSERLAI YG+IST TTIRV+KN+RVC DCH+ IK I I R+I VRD +RFHHF+N
Sbjct: 633 HSERLAIAYGIISTTAGTTIRVIKNIRVCADCHTAIKFITKIVGREITVRDNSRFHHFKN 692
Query: 480 GTCSCGDYW 488
G+CSCGDYW
Sbjct: 693 GSCSCGDYW 701
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 148/299 (49%), Gaps = 20/299 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
+H ++LGL S+ L+ Y K F +A ++FD P+
Sbjct: 129 AHSLHACTVRLGLDSDLYIANALINTYAK---FHNAGKVFDVFPKRG------------- 172
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTIV 120
E G ++ +VF + V+D V W +I G +NG ALD+ REM ++ ++P+ T+
Sbjct: 173 ESG-IDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLS 231
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L ++ + G+ IH Y ++ D + +G +LI+MY++C ++ +L+ F + +
Sbjct: 232 SILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRK 291
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++NS+IAG +G + FR M+ + ++P V+F V+ AC+H + LG ++
Sbjct: 292 DAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLH 351
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+ R G + +VD+ ++ G + A ++ + D + +++ C +HG
Sbjct: 352 GCIVR-LGFDDNEFIASSLVDMYAKCGNIKMA-RYVFDRIDKRDMVAWTAIIMGCAMHG 408
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 125/294 (42%), Gaps = 53/294 (18%)
Query: 37 AMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGE 96
++ LF+ +P +A + +I CY H L+ +F F+
Sbjct: 62 SLHLFNSLPSPPPPLAWSSIIKCYTSHSLLHLSFSSFN---------------------- 99
Query: 97 MARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGA 156
M+ +V PN +L A + L +L +H+ + +D + + A
Sbjct: 100 ---------SMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTVRLGLDSDLYIANA 150
Query: 157 LINMYSRCGD---------------IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEA 201
LIN Y++ + ID +VF+ M RDV ++N++IAG A +G +EA
Sbjct: 151 LINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEA 210
Query: 202 VEMFREMINQG-IRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIV 260
++M REM G ++P T +L + V+ G EI R+ G + + ++
Sbjct: 211 LDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRN-GFDGDVFIGSSLI 269
Query: 261 DLLSRVGRPEEAYDFITNMKIAP--DHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
D+ ++ R E + + I P D I S+++ C +G+ G +R+L
Sbjct: 270 DMYAKCNRLECS---LRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRML 320
>gi|449434296|ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449479547|ref|XP_004155632.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 638
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/488 (42%), Positives = 302/488 (61%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG ++ V+KLG + R L+ LY C + A Q+FDE+P DVV+ MI +
Sbjct: 151 EGAQVQTHVIKLGFVKDVFVRNALIHLYCTCCRVESAKQVFDEVPSSRDVVSWNSMIVGF 210
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V G + A ++F + KD + W +I G V+NGE+ +ALD F+E+ +RPNE +V
Sbjct: 211 VRLGQISVAQKLFVEMPEKDVISWGTIISGCVQNGELEKALDYFKELGEQKLRPNEAILV 270
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L+A +QLG LE G+ IHS R + +G AL++MY++CG ID++ +F+ M E+
Sbjct: 271 SLLAAAAQLGTLEYGKRIHSIANSLRFPMTASLGTALVDMYAKCGCIDESRFLFDRMPEK 330
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++N +I GLA HG EA+ +F + + QG P VTF+GVL ACS GLV G F
Sbjct: 331 DKWSWNVMICGLATHGLGQEALALFEKFLTQGFHPVNVTFIGVLTACSRAGLVSEGKHFF 390
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ MT YGIEP++EHYGC+VDLLSR G +A + I M PD ++ S+L +C++HG
Sbjct: 391 KLMTDTYGIEPEMEHYGCMVDLLSRAGFVYDAVEMINRMPAPPDPVLWASVLGSCQVHGF 450
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++LGE+I +L+ +G YV L+ +A KW++ ++R M E K G S IE
Sbjct: 451 IELGEEIGNKLIQMDPTHNGHYVQLARIFARLRKWEDVSKVRRLMAERNSNKIAGWSLIE 510
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+H F+ GD H + +IYK ++ + + GYS + VLHDIE+ EKE A+ H
Sbjct: 511 AEGRVHRFVAGDKEHERTTEIYKMLEIMGVRIAAAGYSANVSSVLHDIEEEEKENAIKEH 570
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLAI +GL+ TK IR++KNLRVC DCH + K+I+ + +R+IIVRD +RFHHF+ G
Sbjct: 571 SERLAIAFGLLVTKDGDCIRIIKNLRVCGDCHEVSKIISLVFEREIIVRDGSRFHHFKKG 630
Query: 481 TCSCGDYW 488
CSC DYW
Sbjct: 631 ICSCQDYW 638
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 121/284 (42%), Gaps = 44/284 (15%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR-PNEVTIVCVLSACS 127
A +++ + MI V+ ++ L+ M R V PN+ T+ VL ACS
Sbjct: 85 ALSIYNSISHPTVFATNNMIRCFVKGDLPRHSISLYSHMCRSFVAAPNKHTLTFVLQACS 144
Query: 128 QLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM-KERDVTTYN 186
A+ G + +++ K + V ALI++Y C ++ A QVF+E+ RDV ++N
Sbjct: 145 NAFAIREGAQVQTHVIKLGFVKDVFVRNALIHLYCTCCRVESAKQVFDEVPSSRDVVSWN 204
Query: 187 SLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRD 246
S+I G G+ A ++F EM + + +++ +++ C G ++ + F+ +
Sbjct: 205 SMIVGFVRLGQISVAQKLFVEMPEKDV----ISWGTIISGCVQNGELEKALDYFKELGEQ 260
Query: 247 YGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQ 306
K+ P+ +L SLL+A G L+ G++
Sbjct: 261 ---------------------------------KLRPNEAILVSLLAAAAQLGTLEYGKR 287
Query: 307 ---IAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
IA L +A GT L + YA G E+ + +M E
Sbjct: 288 IHSIANSLRFPMTASLGT--ALVDMYAKCGCIDESRFLFDRMPE 329
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/442 (45%), Positives = 289/442 (65%), Gaps = 1/442 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
ND+ S+ +++ Y++ G + NA E+F + D V WT MI G + NG+ AL ++ M
Sbjct: 1132 NDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLM 1191
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ V+P+E T ++ A S L ALE G+ IH+ + K L+H VG +L++MY +CG +
Sbjct: 1192 RVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSV 1251
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A +VF +M R V +N+++ GLA HG EA+ +FR M + GI+P KVTF+GVL+AC
Sbjct: 1252 QDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSAC 1311
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SH GL ++ F +M + YGI P+IEHY C+VD L R GR +EA + I +M M
Sbjct: 1312 SHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASM 1371
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+LL AC+ G + +++A +LL +DS YVLLSN YA+S +W + R MK
Sbjct: 1372 YRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKL 1431
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEG-YSPSTEVVLH 406
V+K+PG S I+V N++H F++ D HPQ IY+K+++L + ++ EG Y P T+ L
Sbjct: 1432 KNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLL 1491
Query: 407 DIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKI 466
D+E+ EKE AL HSE+LAI +GLIST P TIRV+KNLRVC DCHS IK I+ +T+R+I
Sbjct: 1492 DVEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREI 1551
Query: 467 IVRDRNRFHHFENGTCSCGDYW 488
++RD NRFHHF NGTCSCGDYW
Sbjct: 1552 VLRDANRFHHFRNGTCSCGDYW 1573
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 141/328 (42%), Gaps = 61/328 (18%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
+HG +K+G + LV +Y K G A LFD+MPE D V VM+ YVE+
Sbjct: 739 VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPE-RDAVLWNVMLKAYVENS 797
Query: 65 LVENAFEVFS----------------------------------RVKV-----------K 79
+ A FS +VK
Sbjct: 798 FQDEALRFFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGS 857
Query: 80 DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIH 139
+ W + + G++ A+D F+ + R + + VT+V +LSA L+LG IH
Sbjct: 858 NIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIH 917
Query: 140 SYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSI 199
+ + K V +L+NMYS+ G + A + F E D+ ++N++I+ A + +
Sbjct: 918 ALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEM 977
Query: 200 EAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG-FEIFQSMTRDYGIEPQIEH--- 255
EA+ FR+++ G++P + T VL ACS G D G + S Y I+ I +
Sbjct: 978 EAICTFRDLLRDGLKPDQFTLASVLRACSTG---DEGEYFTLGSQVHVYAIKCGIINDSF 1034
Query: 256 -YGCIVDLLSRVGRPEEA-------YDF 275
++DL S+ G+ +EA YDF
Sbjct: 1035 VSTALIDLYSKGGKMDEAEFLLHGKYDF 1062
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 140/336 (41%), Gaps = 43/336 (12%)
Query: 50 VVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
V S ++N Y + G+V A + F D + W MI +N A+ FR++ R
Sbjct: 929 VPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLR 988
Query: 110 DNVRPNEVTIVCVLSACSQLGALE---LGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
D ++P++ T+ VL ACS E LG +H Y K I + V ALI++YS+ G
Sbjct: 989 DGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGK 1048
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+D+A + + D+ ++N+++ G +S +A+E F M GI ++T + A
Sbjct: 1049 MDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKA 1108
Query: 227 CSHGGLVDL--GFEIFQSMTRDYGIEPQIEHYGCIVD-------------LLSRVGRPEE 271
G L++L G +I Q+ G + ++D L + RP+E
Sbjct: 1109 S--GCLINLKQGKQI-QAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDE 1165
Query: 272 ---------------------AYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKR 310
Y + + PD +L+ A L+ G+QI
Sbjct: 1166 VAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHAN 1225
Query: 311 LLDCR-SADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
++ S D L + Y G ++A ++ KM
Sbjct: 1226 VVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKM 1261
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 88/216 (40%), Gaps = 31/216 (14%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ H +++ G +R L+ +Y KCG A Q+FD+ + D+V ++ Y
Sbjct: 630 GKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSD-RDLVTWNSILAAYA 688
Query: 62 EHG--LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
+ EN E F R L RE R +T+
Sbjct: 689 QFADSSYENVLEGF-------------------------RLFGLLREFGFSITR---LTL 720
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+L C G +++ +H Y K +L+ V GAL+N+Y + G + +A +F++M E
Sbjct: 721 APLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPE 780
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRP 215
RD +N ++ + EA+ F G P
Sbjct: 781 RDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXP 816
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/442 (45%), Positives = 289/442 (65%), Gaps = 1/442 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
ND+ S+ +++ Y++ G + NA E+F + D V WT MI G + NG+ AL ++ M
Sbjct: 1132 NDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLM 1191
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ V+P+E T ++ A S L ALE G+ IH+ + K L+H VG +L++MY +CG +
Sbjct: 1192 RVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSV 1251
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A +VF +M R V +N+++ GLA HG EA+ +FR M + GI+P KVTF+GVL+AC
Sbjct: 1252 QDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSAC 1311
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SH GL ++ F +M + YGI P+IEHY C+VD L R GR +EA + I +M M
Sbjct: 1312 SHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASM 1371
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+LL AC+ G + +++A +LL +DS YVLLSN YA+S +W + R MK
Sbjct: 1372 YRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKL 1431
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEG-YSPSTEVVLH 406
V+K+PG S I+V N++H F++ D HPQ IY+K+++L + ++ EG Y P T+ L
Sbjct: 1432 KNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLL 1491
Query: 407 DIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKI 466
D+E+ EKE AL HSE+LAI +GLIST P TIRV+KNLRVC DCHS IK I+ +T+R+I
Sbjct: 1492 DVEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREI 1551
Query: 467 IVRDRNRFHHFENGTCSCGDYW 488
++RD NRFHHF NGTCSCGDYW
Sbjct: 1552 VLRDANRFHHFRNGTCSCGDYW 1573
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 141/328 (42%), Gaps = 61/328 (18%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
+HG +K+G + LV +Y K G A LFD+MPE D V VM+ YVE+
Sbjct: 739 VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPE-RDAVLWNVMLKAYVENS 797
Query: 65 LVENAFEVFS----------------------------------RVKV-----------K 79
+ A FS +VK
Sbjct: 798 FQDEALRFFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGS 857
Query: 80 DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIH 139
+ W + + G++ A+D F+ + R + + VT+V +LSA L+LG IH
Sbjct: 858 NIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIH 917
Query: 140 SYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSI 199
+ + K V +L+NMYS+ G + A + F E D+ ++N++I+ A + +
Sbjct: 918 ALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEM 977
Query: 200 EAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG-FEIFQSMTRDYGIEPQIEH--- 255
EA+ FR+++ G++P + T VL ACS G D G + S Y I+ I +
Sbjct: 978 EAICTFRDLLRDGLKPDQFTLASVLRACSTG---DEGEYFTLGSQVHVYAIKCGIINDSF 1034
Query: 256 -YGCIVDLLSRVGRPEEA-------YDF 275
++DL S+ G+ +EA YDF
Sbjct: 1035 VSTALIDLYSKGGKMDEAEFLLHGKYDF 1062
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 140/336 (41%), Gaps = 43/336 (12%)
Query: 50 VVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
V S ++N Y + G+V A + F D + W MI +N A+ FR++ R
Sbjct: 929 VPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLR 988
Query: 110 DNVRPNEVTIVCVLSACSQLGALE---LGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
D ++P++ T+ VL ACS E LG +H Y K I + V ALI++YS+ G
Sbjct: 989 DGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGK 1048
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+D+A + + D+ ++N+++ G +S +A+E F M GI ++T + A
Sbjct: 1049 MDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKA 1108
Query: 227 CSHGGLVDL--GFEIFQSMTRDYGIEPQIEHYGCIVD-------------LLSRVGRPEE 271
G L++L G +I Q+ G + ++D L + RP+E
Sbjct: 1109 S--GCLINLKQGKQI-QAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDE 1165
Query: 272 ---------------------AYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKR 310
Y + + PD +L+ A L+ G+QI
Sbjct: 1166 VAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHAN 1225
Query: 311 LLDCR-SADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
++ S D L + Y G ++A ++ KM
Sbjct: 1226 VVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKM 1261
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 88/216 (40%), Gaps = 31/216 (14%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ H +++ G +R L+ +Y KCG A Q+FD+ + D+V ++ Y
Sbjct: 630 GKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSD-RDLVTWNSILAAYA 688
Query: 62 EHG--LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
+ EN E F R L RE R +T+
Sbjct: 689 QFADSSYENVLEGF-------------------------RLFGLLREFGFSITR---LTL 720
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+L C G +++ +H Y K +L+ V GAL+N+Y + G + +A +F++M E
Sbjct: 721 APLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPE 780
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRP 215
RD +N ++ + EA+ F G P
Sbjct: 781 RDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFFP 816
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/487 (43%), Positives = 307/487 (63%), Gaps = 1/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ H VL+ GL + ++++Y KCG+ + A ++F+ MP VV +I V
Sbjct: 351 GKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPN-KTVVTWNSLIAGLV 409
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G +E A+ +F + +D V W MI LV+ A++LFREMQ + + VT+V
Sbjct: 410 RDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVG 469
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+ SAC LGAL+L +W+ +Y+ K+ I ++ +G AL++M+SRCGD A+ VF+ M++RD
Sbjct: 470 IASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRD 529
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V+ + + I +AM G + A+E+F EM+ Q ++P V FV +L ACSHGG VD G ++F
Sbjct: 530 VSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFW 589
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM + +GI P I HYGC+VDLL R G EEA D I +M I P+ ++ GSLL+AC+ H +
Sbjct: 590 SMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNV 649
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+L A++L G +VLLSN YAS+GKW + ++R +MKE GVQK PG SSIEV
Sbjct: 650 ELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEKGVQKVPGSSSIEV 709
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
IHEF GD H + I ++E+ + GY P T VL D+++ EKE L+ HS
Sbjct: 710 QGLIHEFTSGDESHAENTHIGLMLEEINCRLSEAGYVPDTTNVLLDVDEQEKEHLLSRHS 769
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ YGLI+T IRVVKNLR+C+DCHS KL++ + R+I VRD NR+H F+ G
Sbjct: 770 EKLAMAYGLITTGQGIPIRVVKNLRMCSDCHSFAKLVSKLYNREITVRDNNRYHFFKEGF 829
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 830 CSCRDYW 836
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 178/357 (49%), Gaps = 44/357 (12%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG ++HG VLK+GL D+ S +I+ Y
Sbjct: 148 EGVQVHGAVLKMGLE--------------------------------GDIFVSNSLIHFY 175
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
E G V+ ++F + ++ V WT++I+G A+ LF +M V PN VT+V
Sbjct: 176 AECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMV 235
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
CV+SAC++L LELG+ + SY+ + ++L+ I+ AL++MY +CGDI A Q+F+E +
Sbjct: 236 CVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANK 295
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
++ YN++++ H + + + + EM+ +G RP KVT + + AC+ G + +G
Sbjct: 296 NLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSH 355
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML--GSLLSACKIH 298
+ R+ G+E I+D+ + G+ E A +M P+ ++ SL++
Sbjct: 356 AYVLRN-GLEGWDNISNAIIDMYMKCGKREAACKVFEHM---PNKTVVTWNSLIAGLVRD 411
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
G ++L +I +L+ D ++ + A ++EA+++ +M+ G+ PG
Sbjct: 412 GDMELAWRIFDEMLE---RDLVSWNTMIGALVQVSMFEEAIELFREMQNQGI---PG 462
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 164/371 (44%), Gaps = 98/371 (26%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++ + +LG+ + LV++Y KCG+ A Q+FDE N V+ +T+M N YV
Sbjct: 250 GKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSN-YV 308
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
H W + + L + EM + RP++VT++
Sbjct: 309 HHE-------------------WASDV------------LVILDEMLQKGPRPDKVTMLS 337
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
++AC+QLG L +G+ H+Y+ ++ ++ + A+I+MY +CG + A +VFE M +
Sbjct: 338 TIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKT 397
Query: 182 VTTYNSLIAGLAMHG--------------RSI-----------------EAVEMFREMIN 210
V T+NSLIAGL G R + EA+E+FREM N
Sbjct: 398 VVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQN 457
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
QGI +VT VG+ +AC + G +DL + + ++ I ++ +VD+ SR G P
Sbjct: 458 QGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKN-DIHVDLQLGTALVDMFSRCGDPS 516
Query: 271 EAYDFITNM----------------------------------KIAPDHIMLGSLLSACK 296
A M K+ PD ++ +LL+AC
Sbjct: 517 SAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACS 576
Query: 297 IHGKLQLGEQI 307
G + G Q+
Sbjct: 577 HGGSVDQGRQL 587
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 124/263 (47%), Gaps = 13/263 (4%)
Query: 16 SNRSTRLKLVELYGKCGEFKDAMQLFDEM-----------PECNDVVASTVMINCYVEHG 64
+N TR +L C K+ QL +M N ++AS+V I
Sbjct: 20 ANPITRNSSSKLLVNCKTLKELKQLHCDMMKKGLLCHKPASNLNKLIASSVQIGTLESLD 79
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
NAF + + +I G G +A+ L+ +M + P++ T +LS
Sbjct: 80 YARNAFGD-DDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLS 138
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
ACS++ AL G +H + K ++ + V +LI+ Y+ CG +D ++F+ M ER+V +
Sbjct: 139 ACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVS 198
Query: 185 YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT 244
+ SLI G + S EAV +F +M G+ P VT V V++AC+ ++LG ++ S
Sbjct: 199 WTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVC-SYI 257
Query: 245 RDYGIEPQIEHYGCIVDLLSRVG 267
+ G+E +VD+ + G
Sbjct: 258 SELGMELSTIMVNALVDMYMKCG 280
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/450 (45%), Positives = 296/450 (65%), Gaps = 1/450 (0%)
Query: 39 QLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMA 98
+LF+EMP N + + +MI+ Y ++G + A +F + +D+V W A+I G +NG
Sbjct: 302 ELFEEMPFPN-IGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYE 360
Query: 99 RALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALI 158
A+++ EM+RD N T C LSAC+ + ALELG+ +H + + + +VG AL+
Sbjct: 361 EAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALV 420
Query: 159 NMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKV 218
MY +CG ID+A VF+ ++ +D+ ++N+++AG A HG +A+ +F MI G++P ++
Sbjct: 421 GMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEI 480
Query: 219 TFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITN 278
T VGVL+ACSH GL D G E F SM +DYGI P +HY C++DLL R G EEA + I N
Sbjct: 481 TMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRN 540
Query: 279 MKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEA 338
M PD G+LL A +IHG ++LGEQ A+ + +SG YVLLSN YA+SG+W +
Sbjct: 541 MPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDV 600
Query: 339 VQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYS 398
++R KM++ GVQK PG S +EV N+IH F +GD HP++ +IY ++EL +K EGY
Sbjct: 601 SKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGDCFHPEKGRIYAFLEELDLKMKHEGYV 660
Query: 399 PSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLI 458
ST++VLHD+E+ EK+ L HSE+LA+ +G+++ IRV+KNLRVC DCH+ IK I
Sbjct: 661 SSTKLVLHDVEEEEKKHMLKYHSEKLAVAFGILTMPSGKPIRVMKNLRVCEDCHNAIKHI 720
Query: 459 ANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
+ I R IIVRD +R+HHF G CSC DYW
Sbjct: 721 SKIVGRLIIVRDSHRYHHFSEGICSCRDYW 750
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 157/358 (43%), Gaps = 28/358 (7%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
++ Y + +F A LFD+MP D+ + +M+ Y + + +A +F + KD V
Sbjct: 70 MISGYLRNAKFSLARDLFDKMPH-KDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVS 128
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W AM+ G VR+G + A D+F M N ++ +L+A + G LE R +
Sbjct: 129 WNAMLSGYVRSGHVDEARDVFDRMPHK----NSISWNGLLAAYVRSGRLEEARRLF---- 180
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
+ + D I L+ Y + + A Q+F+++ RD+ ++N++I+G A G +A
Sbjct: 181 ESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARR 240
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT--RDYGIEPQIEHYGCIVD 261
+F E + + T+ ++ A G++D +F M R+ I Y
Sbjct: 241 LFEESPVRDV----FTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGYA---- 292
Query: 262 LLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT 321
R+ E ++ + I +IM+ + L + + +R DS +
Sbjct: 293 QYKRMDMGRELFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQR-------DSVS 345
Query: 322 YVLLSNAYASSGKWKEAVQIRAKMKEAG--VQKEPGCSSIEVNNEIHEFILGDIRHPQ 377
+ + YA +G ++EA+ + +MK G + + C ++ +I LG H Q
Sbjct: 346 WAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQ 403
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 35/210 (16%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++HGQV++ G LV +Y KCG +A +F + + D+V+ M+ Y
Sbjct: 397 GKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGV-QHKDIVSWNTMLAGYA 455
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG F R +AL +F M V+P+E+T+V
Sbjct: 456 RHG--------FGR-----------------------QALTVFESMITAGVKPDEITMVG 484
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VLSACS G + G + HS + I N +I++ R G +++A + M E
Sbjct: 485 VLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFE 544
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
D T+ +L+ +HG ++E E EM+
Sbjct: 545 PDAATWGALLGASRIHG-NMELGEQAAEMV 573
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 50 VVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
V T I+ ++ +G + A VF + ++++V + AMI G +RN + + A DLF +M
Sbjct: 33 TVKCTKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPH 92
Query: 110 DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDK 169
++ + +L+ ++ L R + M + + + A+++ Y R G +D+
Sbjct: 93 KDL----FSWNLMLTGYARNRRLRDARMLFDSMPEKDV----VSWNAMLSGYVRSGHVDE 144
Query: 170 ALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMF 205
A VF+ M ++ ++N L+A GR EA +F
Sbjct: 145 ARDVFDRMPHKNSISWNGLLAAYVRSGRLEEARRLF 180
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/465 (44%), Positives = 305/465 (65%), Gaps = 1/465 (0%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
++ Y E +A ++FD MP D+V+ MI+ Y G V A E+F + +D
Sbjct: 29 MLAAYVSRSEVAEARKVFDGMP-MRDLVSWNTMIHGYAMRGEVGLAREIFDGTEDRDAFS 87
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W++MI ++ AL+L+REM ++ P+ +T+V V+SACS LGAL +G +H ++
Sbjct: 88 WSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALAVGAEVHRFVE 147
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
+RI+L+ +G ALI+MY++CGDI+ A +VF+ M E+DV T++S+I GLA HG E++
Sbjct: 148 SNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHGLGHESLS 207
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
+F +MI++G++P VTFVGVL AC+H GLV G + F+SM +GIEP +EHYGC+VDLL
Sbjct: 208 LFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDLL 267
Query: 264 SRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV 323
R G EEA I +M PD I+ +LL AC+IH +++ E+ +L G YV
Sbjct: 268 GRSGHVEEARQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAKLRVLDPLGDGHYV 327
Query: 324 LLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYK 383
LLSN YA + W+ ++R ++ +Q+ PG SSIE + +IHEF+ GD HP+ ++IY+
Sbjct: 328 LLSNIYAQANSWEGVAEMRKTIRRDNIQRIPGRSSIEWDEKIHEFVSGDRLHPRSKEIYR 387
Query: 384 KMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVK 443
++E+ +K GY P T +VL DI++ KE +LA HSE+LAI + L++T +TIR+ K
Sbjct: 388 VLEEMMDRLKQAGYKPMTGLVLQDIDEQSKERSLAEHSEKLAIAFALLTTPARSTIRITK 447
Query: 444 NLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
NLR C DCHS +KLI+ + RK+IVRDRNRFHHF G CSC DYW
Sbjct: 448 NLRACEDCHSAMKLISLVYDRKLIVRDRNRFHHFSEGQCSCKDYW 492
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 35/204 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G E+H V + + L+++Y KCG+ + A ++FD MPE DV + MI
Sbjct: 139 GAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPE-KDVQTWSSMIIGLA 197
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HGL +L LF +M + ++PN VT V
Sbjct: 198 NHGLGHE-------------------------------SLSLFSKMISEGMKPNGVTFVG 226
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VL AC+ +G + G ++ S H I+ G ++++ R G +++A Q+ M E
Sbjct: 227 VLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFE 286
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVE 203
D + +L+ +H +++E E
Sbjct: 287 PDTIIWRALLGACRIH-KNVEIAE 309
>gi|357119334|ref|XP_003561397.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Brachypodium distachyon]
Length = 635
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/487 (42%), Positives = 295/487 (60%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H +K G + R L YG CG+ +FDE+P DVV ++ YV
Sbjct: 149 GSHVHALAVKAGAAGDLYVRNALTHFYGVCGDVGAMRTVFDELPRVRDVVTWNAVLAGYV 208
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G+V A EVF + V+D V W+ ++ G V+ GE+ AL +FR+M VR NE +V
Sbjct: 209 RAGMVRAAREVFEEMPVRDEVSWSTLVGGYVKEGELDVALGVFRDMVEKGVRVNEAAVVT 268
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
LSA +Q+G LE GR++H + + + ++ VG AL++M+S+CG + A +VF+ M RD
Sbjct: 269 ALSAAAQMGLLEHGRFVHEVVQRTGMPVSVNVGAALVDMFSKCGCVAVAREVFDGMPRRD 328
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +N++I GLA HG +AVE+F +++G+ PT +TFVGVLNACS GLV G F+
Sbjct: 329 VFAWNAMICGLASHGLGQDAVELFWRFLDEGLWPTDITFVGVLNACSRCGLVAEGRRYFK 388
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M Y IEP++EHYGC+VDLL R G EA + I M IAPD ++ G++LSACK H +
Sbjct: 389 LMVDKYRIEPEMEHYGCMVDLLGRAGLVSEAIELIEGMHIAPDPVLWGTVLSACKTHNLV 448
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
LG + +L++ A G YVLL++ YA + KW E ++R M G K G S +E
Sbjct: 449 DLGITVGNKLIELEPAHDGHYVLLASIYAKAKKWDEVREVRKLMSSRGTGKSAGWSLMEA 508
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+H+F++GD+ H QIY + + + + GY P VLHDI D EK A+ +HS
Sbjct: 509 QGNLHKFLVGDMDHKDSVQIYNMLDMINRRLADAGYVPDVSSVLHDIGDEEKVHAIKVHS 568
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ERLAI YG I T+ + IR+VKNL+VC DCH K++ + R+IIVRD +RFHH + G
Sbjct: 569 ERLAIAYGFIVTEVGSPIRIVKNLQVCGDCHEFSKMVTKVFNREIIVRDGSRFHHMKEGK 628
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 629 CSCLDYW 635
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 43/251 (17%)
Query: 101 LDLFREMQRDNVRPNEVTIVCV---LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGAL 157
L LF + R N+ + + L A + LG +H+ K + V AL
Sbjct: 112 LRLFPNLPRRNLHSFTFLLASISNHLDATDHRASSFLGSHVHALAVKAGAAGDLYVRNAL 171
Query: 158 INMYSRCGDID--------------------------------KALQVFEEMKERDVTTY 185
+ Y CGD+ A +VFEEM RD ++
Sbjct: 172 THFYGVCGDVGAMRTVFDELPRVRDVVTWNAVLAGYVRAGMVRAAREVFEEMPVRDEVSW 231
Query: 186 NSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR 245
++L+ G G A+ +FR+M+ +G+R + V L+A + GL++ G + + + R
Sbjct: 232 STLVGGYVKEGELDVALGVFRDMVEKGVRVNEAAVVTALSAAAQMGLLEHGRFVHEVVQR 291
Query: 246 DYGIEPQIEHYGCIVDLLSRVG---RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
G+ + +VD+ S+ G E +D + + + M+ L S HG Q
Sbjct: 292 T-GMPVSVNVGAALVDMFSKCGCVAVAREVFDGMPRRDVFAWNAMICGLAS----HGLGQ 346
Query: 303 LGEQIAKRLLD 313
++ R LD
Sbjct: 347 DAVELFWRFLD 357
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/480 (42%), Positives = 309/480 (64%), Gaps = 2/480 (0%)
Query: 2 GREIHGQVLKLGL-RSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
G+ I+ + +K G+ N L++++ CGE A +FDEM + DV++ T ++ +
Sbjct: 258 GKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEM-KTRDVISWTSIVTGF 316
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++ A + F ++ +D V WTAMIDG +R L LFR+MQ NV+P+E T+V
Sbjct: 317 ANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMV 376
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L+AC+ LGALELG W +Y+ K++I + +G ALI+MY +CG+++KA ++F EM+++
Sbjct: 377 SILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKK 436
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D T+ ++I GLA +G EA+ MF M+ + P ++T++GV+ AC+H GLV G F
Sbjct: 437 DKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFF 496
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+M +GI+P + HYGC+VDLL R G +EA + I NM + P+ I+ GSLL AC++H
Sbjct: 497 SNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKN 556
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+QL E A +L+ + YVLL N YA+ KWK +R M E G++K PGCS +E
Sbjct: 557 VQLAEMAANEILELEPENGAVYVLLCNIYAACKKWKNLHNVRKMMMERGIKKIPGCSLME 616
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+N ++EF+ GD HPQ ++IY K++ +KQ + GYSP T V D+ + +KE AL +H
Sbjct: 617 MNGIVYEFVAGDKSHPQSKEIYAKLENMKQDLSNAGYSPDTSEVFLDVGEEDKETALYMH 676
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI Y LIS+ TIR+VKNLR+C DCH M +++ + R++IVRD+ RFHHF +G
Sbjct: 677 SEKLAIAYALISSGKGVTIRIVKNLRMCVDCHHMAMVVSKVYNRELIVRDKTRFHHFRHG 736
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 155/362 (42%), Gaps = 49/362 (13%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
E +IH Q +K GL SN LF + ++ C
Sbjct: 50 EINQIHSQTIKTGLSSN---------------------HLF---------LTKVIIFCCT 79
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
E G V A +VF + W MI G R + L++ M N++P+ T
Sbjct: 80 KESGDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFP 139
Query: 121 CVLSACSQLGALELGRWIHSYMGKH-RIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+L ++ AL+ G+ + ++ H +D N V I+++S CG ++ A ++F+
Sbjct: 140 FLLKGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDG 199
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMIN--QGIRPTKVTFVGVLNACSHGGLVDL-- 235
+V T+N +++G R E+ +F EM + + P VT V +L+ACS L DL
Sbjct: 200 WEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSK--LKDLVG 257
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK----IAPDHIMLGSL 291
G I+ ++ +EP + ++D+ + G + A MK I+ I+ G
Sbjct: 258 GKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTG-F 316
Query: 292 LSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
+ C+I + +Q+ +R D ++ + + Y ++KE + + M+ + V+
Sbjct: 317 ANTCRIDLARKYFDQMPER-------DYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVK 369
Query: 352 KE 353
+
Sbjct: 370 PD 371
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/492 (41%), Positives = 302/492 (61%), Gaps = 5/492 (1%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
GRE+HG V++ G+ N LV +Y C + A +FD M D V+ V+I Y
Sbjct: 197 SGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSR-RDTVSWNVLITAY 255
Query: 61 VEHGLVENAFEVFSRVKVK----DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
+ E VF R+ + + W A+I G ++NG +AL++ MQ +PN+
Sbjct: 256 FLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQ 315
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
+TI VL AC+ L +L G+ IH Y+ +H + AL+ MY++CGD++ + +VF
Sbjct: 316 ITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSM 375
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
M +RD ++N++I +MHG EA+ +FREM++ G+RP VTF GVL+ CSH LVD G
Sbjct: 376 MTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEG 435
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
IF SM+RD+ +EP +H+ C+VD+LSR GR EEAY+FI M I P G+LL C+
Sbjct: 436 LLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCR 495
Query: 297 IHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGC 356
++ ++LG A RL + S + G YVLLSN S+ W EA + R M++ GV K PGC
Sbjct: 496 VYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPGC 555
Query: 357 SSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWA 416
S I+V N +H F++GD + Q ++IY+ + + + +++ GY P+T+ VL D++ EKE
Sbjct: 556 SWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNTDFVLQDVDQEEKEEV 615
Query: 417 LAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHH 476
L HSE+LA+ +G+++ ++IRV KNLR+C DCH+ IK +A I KIIVRD RFHH
Sbjct: 616 LCNHSEKLAVAFGVLNLNGESSIRVFKNLRICGDCHNAIKFMAKIVGVKIIVRDSLRFHH 675
Query: 477 FENGTCSCGDYW 488
F +G CSC D+W
Sbjct: 676 FRDGLCSCQDFW 687
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 116/238 (48%), Gaps = 7/238 (2%)
Query: 21 RLKLVELYGKCGEFKDAMQLFDEMPE------CNDVVASTVMINCYVEHGLVENAFEVFS 74
+L L+ + C +D M + C+DV+ +I+ Y + E A VF
Sbjct: 78 KLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFE 137
Query: 75 RVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALEL 134
+ +D + WT+M V G + AL FR+M + RPN VT+ +L AC+ L L+
Sbjct: 138 GMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKS 197
Query: 135 GRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAM 194
GR +H ++ ++ + N V AL+NMY+ C I +A VF+ M RD ++N LI +
Sbjct: 198 GREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFL 257
Query: 195 HGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQ 252
+ + + +F M+++G+ ++ V+ C G + E+ M ++ G +P
Sbjct: 258 NKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRM-QNSGFKPN 314
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 157 LINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRP 215
I +YS GD+ +A +F+++ + D+ T+ LI+ L HGRS+EA++ + + ++ + P
Sbjct: 17 FIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEP 76
Query: 216 TKVTFVGVLNACS 228
K+ + V AC+
Sbjct: 77 DKLLLLSVAKACA 89
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/476 (43%), Positives = 310/476 (65%), Gaps = 15/476 (3%)
Query: 24 LVELYGKCGEFKD---AMQLFDEMPECND---VVASTVMINCYVEHGLVENAFEVFSRVK 77
+ L C E KD M+L + E + V + ++N Y + G ++ A +VF ++
Sbjct: 183 MATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLS 242
Query: 78 VKDTVCWTAMIDGLVRNGEMARALDLFREMQR-DNVRPNEVTIVCVLSACSQLGALELGR 136
KD W+A+I G V+N AL LFRE+ N+RPNEVTI+ V+SAC+QLG LE GR
Sbjct: 243 DKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGR 302
Query: 137 WIHSYMGK----HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGL 192
W+H Y+ + H + LN+ +LI+M+S+CGDID A ++F+ M +D+ ++NS++ G
Sbjct: 303 WVHDYITRTQKGHSVSLNN----SLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGF 358
Query: 193 AMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQ 252
A+HG EA+ FR M ++P ++TF+GVL ACSH GLV G ++F + YG+ +
Sbjct: 359 ALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLK 418
Query: 253 IEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
EHYGC+VDLL R G EA +FI M + PD + GS+L AC+++ L+LGE+ A+ LL
Sbjct: 419 SEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLL 478
Query: 313 DCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGD 372
+ G Y+LLSN YA W E ++R M E G+QK PGCSS+ ++N H F+ GD
Sbjct: 479 KLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGD 538
Query: 373 IRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLIS 432
HP+ +I ++++++ +KL GY T VL +I+D +KE +++ HSE+LA+CYGL+
Sbjct: 539 CSHPEIAEISIMLRQVREKLKLAGYVADTSEVLLNIDDNKKEESVSQHSEKLALCYGLLK 598
Query: 433 TKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
++ I ++KNLRVC+DCH++IKL++ I +R+I +RDRNRFHHF++G+CSC DYW
Sbjct: 599 SEIGGRIVILKNLRVCSDCHTLIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 157/299 (52%), Gaps = 35/299 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +HGQV+K L S+ L+ +Y CG+ K A LF+ M N VV
Sbjct: 98 GKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVV---------- 147
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
WT+MI G ++N AL L+++M+ D P+EVT+
Sbjct: 148 ----------------------WTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMAT 185
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
++SAC++L L +G +HS++ + + + ++G AL+NMY++CGD+ A QVF+++ ++D
Sbjct: 186 LVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKD 245
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMI-NQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
V +++LI G + RS EA+++FRE+ +RP +VT + V++AC+ G ++ G +
Sbjct: 246 VYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVH 305
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+TR + ++D+ S+ G + A +M D I S+++ +HG
Sbjct: 306 DYITRTQK-GHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSY-KDLISWNSMVNGFALHG 362
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 89/169 (52%), Gaps = 3/169 (1%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPNEVTIVCVLSACS 127
A+ VF+ + D + W +M+ V + RAL + EM +R P+ T +L C+
Sbjct: 31 AYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90
Query: 128 QLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNS 187
L ++G+ +H + K+ + + + L+NMY+ CGD+ A +FE M R+ + S
Sbjct: 91 LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150
Query: 188 LIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
+I+G + EA+ ++++M G P +VT +++AC+ L DLG
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAE--LKDLG 197
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/486 (43%), Positives = 306/486 (62%), Gaps = 2/486 (0%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
+I ++ ++ N + +++ Y CG +A +LF+ MP VVA MI C+ ++
Sbjct: 301 DIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMP-IKSVVACNAMILCFGQN 359
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
G V A +VF +++ KD W+AMI R G AL+LFR MQR+ +RPN +++ VL
Sbjct: 360 GEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVL 419
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
S C+ L L+ GR IH+ + + + DL+ V L++MY +CG++ KA QVF+ +DV
Sbjct: 420 SVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVV 479
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
+NS+I G A HG +EA+ +F +M GI P VTFVGVL+ACS+ G V G EIF SM
Sbjct: 480 MWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSM 539
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQL 303
Y +E +IEHY C+VDLL R G+ EA D I M + D I+ G+LL AC+ H KL L
Sbjct: 540 ETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDL 599
Query: 304 GEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNN 363
E AK+LL ++G ++LLSN YAS G+W + ++R M++ V K PGCS I V
Sbjct: 600 AEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEK 659
Query: 364 EIHEFILGDIR-HPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSE 422
++H+F GD HP+ +I + ++ L +++ GY P VLHD+++ EK +L HSE
Sbjct: 660 KVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSE 719
Query: 423 RLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTC 482
+LA+ YGL+ IRV+KNLRVC DCH+ IKLIA +T R+II+RD NRFHHF++G+C
Sbjct: 720 KLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSC 779
Query: 483 SCGDYW 488
SC DYW
Sbjct: 780 SCRDYW 785
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 150/331 (45%), Gaps = 49/331 (14%)
Query: 20 TRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVK 79
TR ++ Y + G +A LFDEMP N VV+ T MI YV++ V+ A ++F + K
Sbjct: 255 TRTNMIGGYCQVGRLVEARMLFDEMPRRN-VVSWTTMITGYVQNQQVDIARKLFEVMPEK 313
Query: 80 DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIH 139
+ V WTAM+ G G + A +LF N P + + C
Sbjct: 314 NEVSWTAMLKGYTNCGRLDEASELF------NAMPIKSVVAC------------------ 349
Query: 140 SYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSI 199
A+I + + G++ KA QVF++M+E+D T++++I G +
Sbjct: 350 ---------------NAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLEL 394
Query: 200 EAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI 259
+A+E+FR M +GIRP + + VL+ C+ +D G EI + R + + +
Sbjct: 395 DALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQ-FDLDVYVASVL 453
Query: 260 VDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSA-- 317
+ + + G +A + D +M S+++ HG LG + + D +
Sbjct: 454 LSMYIKCGNLAKAKQVFDRFAVK-DVVMWNSIITGYAQHG---LGVEALRVFHDMHFSGI 509
Query: 318 --DSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
D T+V + +A + +G K+ ++I M+
Sbjct: 510 MPDDVTFVGVLSACSYTGNVKKGLEIFNSME 540
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 154/333 (46%), Gaps = 24/333 (7%)
Query: 20 TRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVK 79
+R L+ Y + G+ + A +FDEM + N +++ ++ Y ++ + A +F ++ +
Sbjct: 100 SRNSLITRYSRLGQIEKARVVFDEMRDKN-IISWNSIVAGYFQNKRPQEAQNMFDKMSER 158
Query: 80 DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIH 139
+T+ W ++ G + NG + A ++F M NV V+ ++ + G + +
Sbjct: 159 NTISWNGLVSGYINNGMINEAREVFDRMPERNV----VSWTAMVRGYVKEGMISEAETLF 214
Query: 140 SYMG-KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRS 198
M K+ + ++GG L + G ID+A ++F+ M E+DV T ++I G GR
Sbjct: 215 WQMPEKNVVSWTVMLGGLL-----QEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRL 269
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGC 258
+EA +F EM + + V++ ++ VD+ ++F+ M E +
Sbjct: 270 VEARMLFDEMPRRNV----VSWTTMITGYVQNQQVDIARKLFEVMP-----EKNEVSWTA 320
Query: 259 IVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSAD 318
++ + GR +EA + M I + +++ +G++ Q+ ++ R D
Sbjct: 321 MLKGYTNCGRLDEASELFNAMPIK-SVVACNAMILCFGQNGEVPKARQVFDQM---REKD 376
Query: 319 SGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
GT+ + Y G +A+++ M+ G++
Sbjct: 377 EGTWSAMIKVYERKGLELDALELFRMMQREGIR 409
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/486 (43%), Positives = 306/486 (62%), Gaps = 2/486 (0%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
+I ++ ++ N + +++ Y CG +A +LF+ MP VVA MI C+ ++
Sbjct: 301 DIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMP-IKSVVACNAMILCFGQN 359
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
G V A +VF +++ KD W+AMI R G AL+LFR MQR+ +RPN +++ VL
Sbjct: 360 GEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVL 419
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
S C+ L L+ GR IH+ + + + DL+ V L++MY +CG++ KA QVF+ +DV
Sbjct: 420 SVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVV 479
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
+NS+I G A HG +EA+ +F +M GI P VTFVGVL+ACS+ G V G EIF SM
Sbjct: 480 MWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSM 539
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQL 303
Y +E +IEHY C+VDLL R G+ EA D I M + D I+ G+LL AC+ H KL L
Sbjct: 540 ETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDL 599
Query: 304 GEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNN 363
E AK+LL ++G ++LLSN YAS G+W + ++R M++ V K PGCS I V
Sbjct: 600 AEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEK 659
Query: 364 EIHEFILGDIR-HPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSE 422
++H+F GD HP+ +I + ++ L +++ GY P VLHD+++ EK +L HSE
Sbjct: 660 KVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSE 719
Query: 423 RLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTC 482
+LA+ YGL+ IRV+KNLRVC DCH+ IKLIA +T R+II+RD NRFHHF++G+C
Sbjct: 720 KLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSC 779
Query: 483 SCGDYW 488
SC DYW
Sbjct: 780 SCRDYW 785
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 150/331 (45%), Gaps = 49/331 (14%)
Query: 20 TRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVK 79
TR ++ Y + G +A LFDEMP N VV+ T MI YV++ V+ A ++F + K
Sbjct: 255 TRTNMIGGYCQVGRLVEARMLFDEMPRRN-VVSWTTMITGYVQNQQVDIARKLFEVMPEK 313
Query: 80 DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIH 139
+ V WTAM+ G G + A +LF N P + + C
Sbjct: 314 NEVSWTAMLKGYTNCGRLDEASELF------NAMPIKSVVAC------------------ 349
Query: 140 SYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSI 199
A+I + + G++ KA QVF++M+E+D T++++I G +
Sbjct: 350 ---------------NAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLEL 394
Query: 200 EAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI 259
+A+E+FR M +GIRP + + VL+ C+ +D G EI + R + + +
Sbjct: 395 DALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQ-FDLDVYVASVL 453
Query: 260 VDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSA-- 317
+ + + G +A + D +M S+++ HG LG + + D +
Sbjct: 454 LSMYIKCGNLAKAKQVFDRFAVK-DVVMWNSIITGYAQHG---LGVEALRVFHDMHFSGI 509
Query: 318 --DSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
D T+V + +A + +G K+ ++I M+
Sbjct: 510 MPDDVTFVGVLSACSYTGNVKKGLEIFNSME 540
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 154/333 (46%), Gaps = 24/333 (7%)
Query: 20 TRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVK 79
+R L+ Y + G+ + A +FDEM + N +++ ++ Y ++ + A +F ++ +
Sbjct: 100 SRNSLITRYSRLGQIEKARVVFDEMRDKN-IISWNSIVAGYFQNKRPQEAQNMFDKMSER 158
Query: 80 DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIH 139
+T+ W ++ G + NG + A ++F M NV V+ ++ + G + +
Sbjct: 159 NTISWNGLVSGYINNGMINEAREVFDRMPERNV----VSWTAMVRGYVKEGMISEAETLF 214
Query: 140 SYMG-KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRS 198
M K+ + ++GG L + G ID+A ++F+ M E+DV T ++I G GR
Sbjct: 215 WQMPEKNVVSWTVMLGGLL-----QEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRL 269
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGC 258
+EA +F EM + + V++ ++ VD+ ++F+ M E +
Sbjct: 270 VEARMLFDEMPRRNV----VSWTTMITGYVQNQQVDIARKLFEVMP-----EKNEVSWTA 320
Query: 259 IVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSAD 318
++ + GR +EA + M I + +++ +G++ Q+ ++ R D
Sbjct: 321 MLKGYTNCGRLDEASELFNAMPIK-SVVACNAMILCFGQNGEVPKARQVFDQM---REKD 376
Query: 319 SGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
GT+ + Y G +A+++ M+ G++
Sbjct: 377 EGTWSAMIKVYERKGLELDALELFRMMQREGIR 409
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/491 (43%), Positives = 308/491 (62%), Gaps = 4/491 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
E +++H VLK G + L+ +Y G DA ++F M + N VV+ T +++ Y
Sbjct: 118 EAKQLHAHVLKFGFGGDTYALNNLIHVYFAFGSLDDARRVFCTMSDPN-VVSWTSLVSGY 176
Query: 61 VEHGLVENAFEVFSRVKVK-DTVCWTAMIDGLVRNGEMARALDLFREMQ-RDNVRPNEVT 118
+ GLV+ AF VF + K ++V W AMI V+ A LFR M+ + +
Sbjct: 177 SQWGLVDEAFRVFELMPCKKNSVSWNAMIACFVKGNRFREAFALFRRMRVEKKMELDRFV 236
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
+LSAC+ +GALE G WIH Y+ K I L+ + +I+MY +CG +DKA VF +K
Sbjct: 237 AATMLSACTGVGALEQGMWIHKYVEKTGIVLDSKLATTIIDMYCKCGCLDKAFHVFCGLK 296
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSHGGLVDLGF 237
+ V+++N +I G AMHG+ +A+ +F+EM + + P +TFV VL AC+H GLV+ G+
Sbjct: 297 VKRVSSWNCMIGGFAMHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLTACAHSGLVEEGW 356
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F+ M +GI+P EHYGC+VDLL+R GR EEA I M ++PD +LG+LL AC+I
Sbjct: 357 YYFRYMVDVHGIDPTKEHYGCMVDLLARAGRLEEAKKVIDEMPMSPDAAVLGALLGACRI 416
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
HG L+LGE++ R+++ +SG YV+L N YAS GKW++ +R M + GV+KEPG S
Sbjct: 417 HGNLELGEEVGNRVIELDPENSGRYVILGNMYASCGKWEQVAGVRKLMDDRGVKKEPGFS 476
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IE+ ++EF+ G HP E IY K+ E+ + +++ G+ P T+ VLHD+ + E+E L
Sbjct: 477 MIEMEGVVNEFVAGGRDHPLAEAIYAKIYEMLESIRVVGFVPDTDGVLHDLVEEERENPL 536
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LAI YGL+ TK T+RV KNLRVC DCH K+I+ + II+RDR+RFHHF
Sbjct: 537 FYHSEKLAIAYGLLKTKRGETLRVTKNLRVCKDCHQASKMISKVYDCDIIIRDRSRFHHF 596
Query: 478 ENGTCSCGDYW 488
NG CSC DYW
Sbjct: 597 SNGECSCKDYW 607
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/489 (42%), Positives = 315/489 (64%), Gaps = 2/489 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN-DVVASTVMINCY 60
G++IHG +++ ++ + L+ +Y K G + A ++ ++ + DV+A T ++N Y
Sbjct: 259 GKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGY 318
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V+ G + A ++F+ +K D V WTAMI G V+NG A+++F+ M + RPN T+
Sbjct: 319 VKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLA 378
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE- 179
+LSA S + +L G+ IH+ + L+ VG AL MY++ G I+ A +VF +++
Sbjct: 379 AMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQN 438
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
RD ++ S+I LA HG EA+E+F +M+ GI+P +T+VGVL+AC+HGGLV+ G
Sbjct: 439 RDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSY 498
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F M + I+P + HY C+VDL R G +EAY F+ NM + PD I GSLLS+CK++
Sbjct: 499 FDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYK 558
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+ L + A+RLL +SG Y L+N Y+S GKW +A +IR MK GV+KE G S +
Sbjct: 559 NVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWV 618
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
++ N+ H F + D HPQ+++IYK M ++ + +K G++P TE VLHD+E K+ L
Sbjct: 619 QIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMGFAPDTESVLHDLEVEVKDQILRY 678
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +G+IST TT+R++KNLRVCNDCH+ IK I+ + R+IIVRD RFHHF++
Sbjct: 679 HSEKLAIAFGIISTPENTTLRIMKNLRVCNDCHNAIKFISKLVDREIIVRDATRFHHFKD 738
Query: 480 GTCSCGDYW 488
G+CSC DYW
Sbjct: 739 GSCSCKDYW 747
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 180/414 (43%), Gaps = 71/414 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H V+KLGL + L+ +Y K G+ K A +FD M + + + MI+ ++
Sbjct: 126 GKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRM-KLRNTSSWNAMISLHM 184
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTIV 120
G V+ A F + +D V W +MI G ++G AL F + +D +++P+ ++
Sbjct: 185 NCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLA 244
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC---------------- 164
LSAC+ L L G+ IH Y+ + D + VG ALI+MY++
Sbjct: 245 SALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGIS 304
Query: 165 -----------------GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
GDI A Q+F +K+ DV + ++I G +G + +A+E+F+
Sbjct: 305 DLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKT 364
Query: 208 MINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRD-YGIEPQIEH----------- 255
M+++G RP T +L+A S ++ G +I S R + P + +
Sbjct: 365 MVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGS 424
Query: 256 -------------------YGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLS 293
+ ++ L++ G EEA + M I PDHI +LS
Sbjct: 425 INGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLS 484
Query: 294 ACKIHGKLQLGEQIAKRLLDCRSADS--GTYVLLSNAYASSGKWKEAVQIRAKM 345
AC G ++ G + + D Y + + + +G +EA + M
Sbjct: 485 ACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENM 538
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 174/378 (46%), Gaps = 46/378 (12%)
Query: 9 VLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVEN 68
++KLGL + L+ LY K G DA LF+EMP +T++ + Y + G +E
Sbjct: 1 MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTIL-SGYAKQGKLEK 59
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A +VF + V+D+V WT +I G + G A+ +F +M +D V P + T+ VL++C+
Sbjct: 60 AHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAA 119
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSR------------------------- 163
G+ +G+ +HS++ K + V +L+NMY++
Sbjct: 120 TGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAM 179
Query: 164 ------CGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI-NQGIRPT 216
CG +D AL FE + ERD+ ++NS+IAG HG EA++ F ++ + ++P
Sbjct: 180 ISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPD 239
Query: 217 KVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI----VDLLSRVGRPEEA 272
+ + L+AC++ + G +I Y + + G + + + ++ G E A
Sbjct: 240 RFSLASALSACANLEKLSFGKQI-----HGYIVRTMFDASGAVGNALISMYAKSGGVEIA 294
Query: 273 YDFITNMKIAP-DHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYAS 331
I I+ D I +LL+ G + QI L D D + + Y
Sbjct: 295 RRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKD---PDVVAWTAMIVGYVQ 351
Query: 332 SGKWKEAVQIRAKMKEAG 349
+G +A+++ M G
Sbjct: 352 NGLNNDAIEVFKTMVSEG 369
>gi|414883627|tpg|DAA59641.1| TPA: hypothetical protein ZEAMMB73_113196 [Zea mays]
Length = 637
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/487 (42%), Positives = 297/487 (60%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H +K G + R + YG CG+ ++FDE+P DVV ++ YV
Sbjct: 151 GTHVHALAVKAGAAGDLYVRNAQIHFYGVCGDVAAMRKVFDELPIVRDVVTWNAVLAGYV 210
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G+V A EVF + V+D V W+ +I G V+ GE AL +F+ M V+ NE IV
Sbjct: 211 RAGMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALGVFKNMVAQGVKANEAAIVT 270
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
LSA +QLG LE G+++H + + + ++ +G ALI+MYS+CG + A +VF+ M RD
Sbjct: 271 ALSAAAQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMYSKCGSVAAAKEVFDAMPRRD 330
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +NS+I GLA HG +AV++F + +++G PT +TFVGVLNACS GLVD G F+
Sbjct: 331 VFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGVLNACSRTGLVDEGRRYFK 390
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M Y IE ++EHYGC+VDLLSR G +EA + I M+I PD ++ G++LSACK HG +
Sbjct: 391 LMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPPDPVLWGTILSACKRHGLV 450
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
LG + +L++ A G YVLL++ YA + KW E ++R M G K G S +E
Sbjct: 451 DLGITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVRKLMSNRGTSKSAGWSLMEA 510
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ +H+F++GD+ H +IY + + + + GY P VLHDI D EK A+ +HS
Sbjct: 511 HGIVHKFLVGDMNHKDSARIYNMLCTINRRLAEAGYVPDVSSVLHDIGDEEKVHAIKVHS 570
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ERLAI YG I + + IR+VKNL VC DCH K++ + R+I+VRD +RFHH ++G
Sbjct: 571 ERLAIAYGFIVVEAGSPIRIVKNLSVCGDCHEFSKMVTKVFGREIVVRDGSRFHHMKDGK 630
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 631 CSCHDYW 637
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 115/277 (41%), Gaps = 50/277 (18%)
Query: 101 LDLFREMQRDNVRPNEVTIVCV---------LSACSQLGALELGRWIHSYMGKHRIDLNH 151
L LF + R N P+ T + +A + + +G +H+ K +
Sbjct: 110 LRLFPRLPRRN--PHSFTFLLASLSNHLDTEPAAAGSIASRFMGTHVHALAVKAGAAGDL 167
Query: 152 IVGGALINMYSRCGDIDKALQVFEEMK-ERDVTTYNSLIAGL---AMHGRSIE------- 200
V A I+ Y CGD+ +VF+E+ RDV T+N+++AG M G + E
Sbjct: 168 YVRNAQIHFYGVCGDVAAMRKVFDELPIVRDVVTWNAVLAGYVRAGMVGVAREVFDGMPV 227
Query: 201 ---------------------AVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
A+ +F+ M+ QG++ + V L+A + GL++ G +
Sbjct: 228 RDEVSWSTVIGGYVKEGEPEVALGVFKNMVAQGVKANEAAIVTALSAAAQLGLLEQG-KF 286
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGR---PEEAYDFITNMKIAPDHIMLGSLLSACK 296
+ + G+ + ++D+ S+ G +E +D + + + M+ L +
Sbjct: 287 VHEVVKRVGMTMSVNLGAALIDMYSKCGSVAAAKEVFDAMPRRDVFAWNSMICGLATHGL 346
Query: 297 IHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSG 333
H +QL E+ C + S T+V + NA + +G
Sbjct: 347 GHDAVQLFEKFVSEGF-CPT--SITFVGVLNACSRTG 380
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/487 (42%), Positives = 306/487 (62%), Gaps = 1/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR IH V G + + L+ +Y CG A +++D + ++ ST M++ Y
Sbjct: 241 GRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSS-KHLIVSTAMLSGYA 299
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G+V++A +F ++ +D VCW+AMI G + + AL LF EM + P+++T++
Sbjct: 300 KLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLS 359
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V+SACS +GAL WIH+Y+ + V ALI+MY++CG++ KA +VFE M ++
Sbjct: 360 VISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKN 419
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +++S+I AMHG + A+++FR M I P VTF+GVL AC H GLV+ G ++F
Sbjct: 420 VISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFS 479
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM ++GI P EHYGC+VDL R +A + I M AP+ I+ GSL+SAC++HG+
Sbjct: 480 SMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEA 539
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LGE AKRLL+ G V+LSN YA +W + IR M G+ KE S IE+
Sbjct: 540 ELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEI 599
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
NN++H F++ D H Q ++IY+K+ E+ +KL GY PST +L D+E+ +K+ + HS
Sbjct: 600 NNQVHMFMMADRYHKQSDEIYEKLDEVVSKLKLVGYKPSTSGILIDLEEEDKKELVLWHS 659
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+CYGLIS + + IR+VKNLR+C DCHS +KL++ + + +I+VRDR RFHH G
Sbjct: 660 EKLAVCYGLISRRNESCIRIVKNLRICEDCHSFMKLVSKVYQIEIVVRDRTRFHHCSGGI 719
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 720 CSCRDYW 726
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 171/383 (44%), Gaps = 67/383 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G EIHG KLG + + L+ +Y C DA LFD+M C+
Sbjct: 140 GLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKM--------------CH- 184
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
D V W +IDG +NG AL LF +M+ +++P+ V +
Sbjct: 185 -----------------PDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCT 227
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ--------- 172
VLSAC G L GR IH ++ + ++ + ALINMY+ CG +D A +
Sbjct: 228 VLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKH 287
Query: 173 ----------------------VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
+F++M ERD+ ++++I+G A + EA+++F EM+
Sbjct: 288 LIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQ 347
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
+ P ++T + V++ACSH G + I + R G + ++D+ ++ G
Sbjct: 348 KRSVPDQITMLSVISACSHVGALAQANWIHTYVDRS-GFGRALSVNNALIDMYAKCGNLV 406
Query: 271 EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG-TYVLLSNAY 329
+A + NM + I S+++A +HG ++ +R+ + +G T++ + A
Sbjct: 407 KAREVFENMP-RKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYAC 465
Query: 330 ASSGKWKEAVQIRAKM-KEAGVQ 351
+G +E ++ + M E G+
Sbjct: 466 GHAGLVEEGEKLFSSMINEHGIS 488
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/487 (41%), Positives = 311/487 (63%), Gaps = 2/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++H +K+G + N L+ +YGKC + A Q+F M D+V+ + V
Sbjct: 438 GTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVT-KDIVSWNSFLAALV 496
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ L++ A F + +D V WT +I + A+ F+ M ++ PN +
Sbjct: 497 QNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTI 556
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L C LGA ++G+ IH+ K +D IV ALI+MY +CG D + ++F+ M+ERD
Sbjct: 557 LLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCAD-SRRIFDLMEERD 615
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ T+N++I G A HG EA++M++ M + G+ P +VTFVG+LNACSH GLVD G++ F+
Sbjct: 616 IFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFK 675
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM++DYG+ P EHY C+VDLL R G + A FI +M I PD ++ +LL ACKIH
Sbjct: 676 SMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNA 735
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++G++ A++L +++G YV+LSN Y+S G W E ++R MK+ GV KEPGCS ++
Sbjct: 736 EIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQI 795
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+++H F+ GD +H Q E+I ++EL ++K GY P TE VLHDI++ +KE +L HS
Sbjct: 796 KDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHS 855
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ Y L++T I+++KNLR+C DCH+ IK ++++TKR+I +RD NRFHHF NG+
Sbjct: 856 EKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGS 915
Query: 482 CSCGDYW 488
CSC D+W
Sbjct: 916 CSCEDFW 922
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 163/334 (48%), Gaps = 15/334 (4%)
Query: 21 RLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKD 80
R L+ +CG DA LF+++PE VV+ +I Y+++G+V A E+F ++ ++
Sbjct: 325 RTALITGLAQCGRIDDARILFEQIPE-PIVVSWNALITGYMQNGMVNEAKELFDKMPFRN 383
Query: 81 TVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHS 140
T+ W MI G +NG AL L +E+ R + P+ ++ + ACS + ALE G +HS
Sbjct: 384 TISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHS 443
Query: 141 YMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIE 200
K N ALI MY +C +++ A QVF M +D+ ++NS +A L + E
Sbjct: 444 LAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDE 503
Query: 201 AVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIV 260
A F M+++ V++ +++A +H + F++M ++ + P ++
Sbjct: 504 ARNTFDNMLSR----DDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHEL-PNSPILTILL 558
Query: 261 DLLSRVGRP---EEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC-RS 316
+ +G ++ + + + + I+ +L+S + G ++R+ D
Sbjct: 559 GVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISM-----YFKCGCADSRRIFDLMEE 613
Query: 317 ADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
D T+ + YA G +EA+++ M+ AGV
Sbjct: 614 RDIFTWNTIITGYAQHGLGREAIKMYQHMESAGV 647
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 139/315 (44%), Gaps = 37/315 (11%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
++ Y + G+ A +LFD MP DV + M+ Y + +A +F ++ ++ V
Sbjct: 133 MISCYVQNGDITMARRLFDAMPS-RDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVS 191
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
WT MI G R +A D+F +M R+ + P++ LSA LG L++ +
Sbjct: 192 WTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLAL 251
Query: 144 KHRIDLNHIVGGALINMYSR-CGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAV 202
K + + ++G A++N+YSR +D A++ FE M ER+ T++++IA L+ GR A+
Sbjct: 252 KTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAI 311
Query: 203 EMF---------------------------REMINQGIRPTKVTFVGVLNACSHGGLVDL 235
++ R + Q P V++ ++ G+V+
Sbjct: 312 AVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNE 371
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLL 292
E+F M I + ++ ++ GR EEA + + + P L S+
Sbjct: 372 AKELFDKMPFRNTIS-----WAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIF 426
Query: 293 SACKIHGKLQLGEQI 307
AC L+ G Q+
Sbjct: 427 FACSNIVALETGTQV 441
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 13/204 (6%)
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
G V A EVF + +D + W +MI NG A DL+ + N+R + +L
Sbjct: 48 GRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAI----LL 103
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
S +LG + R + M ++ N + A+I+ Y + GDI A ++F+ M RDV+
Sbjct: 104 SGYGRLGRVLEARRVFDGM----LERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVS 159
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
++NS++ G + ++A +F +M + + V G +HG ++IF M
Sbjct: 160 SWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGK----AWDIFCKM 215
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVG 267
R+ G+ P ++ + + +G
Sbjct: 216 HRE-GLLPDQSNFASALSAVKGLG 238
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 127/293 (43%), Gaps = 14/293 (4%)
Query: 29 GKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMI 88
G+ G +A ++FD MP D++A MI+ Y +G+ + A +++ + + ++
Sbjct: 45 GRLGRVGEAREVFDAMPR-RDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILL 103
Query: 89 DGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRID 148
G R G + A +F M N I C + Q G + + R + M +
Sbjct: 104 SGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYV----QNGDITMARRLFDAMPSRDVS 159
Query: 149 LNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM 208
+++ Y + A +FE+M ER++ ++ +I+G +A ++F +M
Sbjct: 160 ----SWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKM 215
Query: 209 INQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSR-VG 267
+G+ P + F L+A G +D+ E + + G E + I+++ SR
Sbjct: 216 HREGLLPDQSNFASALSAVKGLGNLDV-LESLRVLALKTGFERDVVIGTAILNVYSRDTS 274
Query: 268 RPEEAYDFITNMKIAPDH---IMLGSLLSACKIHGKLQLGEQIAKRLLDCRSA 317
+ A F +M ++ M+ +L +I + + E+ + + CR+A
Sbjct: 275 VLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTA 327
>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/488 (43%), Positives = 305/488 (62%), Gaps = 33/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG ++H VLK G S+ + LV YGKC E A ++F+EMP
Sbjct: 110 EGLQVHSHVLKDGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMP--------------- 154
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V++ V WTAMI G R G + A++LFREMQ+ ++P+ +T+V
Sbjct: 155 -----------------VRNLVAWTAMISGHARVGAVDEAMELFREMQKAGIQPDAMTLV 197
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+SAC+ GAL++G W+H+Y+ K+ + + + AL++MY++CG I++A QVF M +
Sbjct: 198 SVVSACAVAGALDIGYWLHAYIEKYFVLTDLELSTALVDMYAKCGCIERAKQVFVHMPVK 257
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D T ++S+I G A HG + +A++ F++M+ + P VTF+ VL+AC+HGGLV G F
Sbjct: 258 DTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAVLSACAHGGLVSRG-RRF 316
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
S+ ++GIEP +EHYGC VDLL R G EEAY T MKI P+ SLL CK
Sbjct: 317 WSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRITTTMKIPPNAATWRSLLMGCKKKKL 376
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
L LGE +A+ LL+ ++ Y+++SN Y+S +W++ ++R MKE ++ PGCSSIE
Sbjct: 377 LNLGEIVARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKVMKEKCIKPVPGCSSIE 436
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
V+ +HEF++GD HP+ + + + M+E+ V+ GY PS VLH + D EKE AL+ H
Sbjct: 437 VDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVRDSGYRPSISDVLHKVVDEEKECALSEH 496
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SER AI YGL+ T+ IRVVKNLRVC DCH +IK+I+ + +R+IIVRDR RFH F G
Sbjct: 497 SERFAIAYGLLKTRAPIVIRVVKNLRVCVDCHEVIKIISKLYEREIIVRDRVRFHKFIKG 556
Query: 481 TCSCGDYW 488
TCSC D+W
Sbjct: 557 TCSCKDFW 564
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 146/291 (50%), Gaps = 5/291 (1%)
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMAR-ALDLFREMQRDNVR-PNEVTIVC 121
G + A VF+++ + W ++I G + +++ + LF+++ PN T+
Sbjct: 38 GNINYARSVFAQIPHPNIFSWNSLIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAF 97
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL AC+ + A G +HS++ K + V +L+N Y +C +I A +VFEEM R+
Sbjct: 98 VLKACAIVTAFGEGLQVHSHVLKDGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRN 157
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ + ++I+G A G EA+E+FREM GI+P +T V V++AC+ G +D+G+ +
Sbjct: 158 LVAWTAMISGHARVGAVDEAMELFREMQKAGIQPDAMTLVSVVSACAVAGALDIGYWL-H 216
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+ Y + +E +VD+ ++ G E A +M + D S++ HG
Sbjct: 217 AYIEKYFVLTDLELSTALVDMYAKCGCIERAKQVFVHMPVK-DTTAWSSMIMGFAYHGLA 275
Query: 302 QLGEQIAKRLLDCR-SADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
Q +++L+ + D T++ + +A A G + + M E G++
Sbjct: 276 QDAIDAFQQMLETEVTPDHVTFLAVLSACAHGGLVSRGRRFWSLMLEFGIE 326
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/487 (41%), Positives = 311/487 (63%), Gaps = 2/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++H +K+G + N L+ +YGKC + A Q+F M D+V+ + V
Sbjct: 438 GTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVT-KDIVSWNSFLAALV 496
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ L++ A F + +D V WT +I + A+ F+ M ++ PN +
Sbjct: 497 QNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTI 556
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L C LGA ++G+ IH+ K +D IV ALI+MY +CG D + ++F+ M+ERD
Sbjct: 557 LLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCAD-SRRIFDLMEERD 615
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ T+N++I G A HG EA++M++ M + G+ P +VTFVG+LNACSH GLVD G++ F+
Sbjct: 616 IFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFK 675
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM++DYG+ P EHY C+VDLL R G + A FI +M I PD ++ +LL ACKIH
Sbjct: 676 SMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNA 735
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++G++ A++L +++G YV+LSN Y+S G W E ++R MK+ GV KEPGCS ++
Sbjct: 736 EIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQI 795
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+++H F+ GD +H Q E+I ++EL ++K GY P TE VLHDI++ +KE +L HS
Sbjct: 796 KDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHS 855
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ Y L++T I+++KNLR+C DCH+ IK ++++TKR+I +RD NRFHHF NG+
Sbjct: 856 EKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGS 915
Query: 482 CSCGDYW 488
CSC D+W
Sbjct: 916 CSCEDFW 922
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 163/334 (48%), Gaps = 15/334 (4%)
Query: 21 RLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKD 80
R L+ +CG DA LF+++PE VV+ +I Y+++G+V A E+F ++ ++
Sbjct: 325 RTALITGLAQCGRIDDARILFEQIPE-PIVVSWNALITGYMQNGMVNEAKELFDKMPFRN 383
Query: 81 TVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHS 140
T+ W MI G +NG AL L +E+ R + P+ ++ + ACS + ALE G +HS
Sbjct: 384 TISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHS 443
Query: 141 YMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIE 200
K N ALI MY +C +++ A QVF M +D+ ++NS +A L + E
Sbjct: 444 LAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDE 503
Query: 201 AVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIV 260
A F M+++ V++ +++A +H + F++M ++ + P ++
Sbjct: 504 ARNTFDNMLSR----DDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHEL-PNSPILTILL 558
Query: 261 DLLSRVGRP---EEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC-RS 316
+ +G ++ + + + + I+ +L+S + G ++R+ D
Sbjct: 559 GVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISM-----YFKCGCADSRRIFDLMEE 613
Query: 317 ADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
D T+ + YA G +EA+++ M+ AGV
Sbjct: 614 RDIFTWNTIITGYAQHGLGREAIKMYQHMESAGV 647
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 139/315 (44%), Gaps = 37/315 (11%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
++ Y + G+ A +LFD MP DV + M+ Y + +A +F ++ ++ V
Sbjct: 133 MISCYVQNGDITMARRLFDAMPS-RDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVS 191
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
WT MI G R +A D+F +M R+ + P++ LSA LG L++ +
Sbjct: 192 WTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLAL 251
Query: 144 KHRIDLNHIVGGALINMYSR-CGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAV 202
K + + ++G A++N+YSR +D A++ FE M ER+ T++++IA L+ GR A+
Sbjct: 252 KTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAI 311
Query: 203 EMF---------------------------REMINQGIRPTKVTFVGVLNACSHGGLVDL 235
++ R + Q P V++ ++ G+V+
Sbjct: 312 AVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNE 371
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLL 292
E+F M I + ++ ++ GR EEA + + + P L S+
Sbjct: 372 AKELFDKMPFRNTIS-----WAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIF 426
Query: 293 SACKIHGKLQLGEQI 307
AC L+ G Q+
Sbjct: 427 FACSNIVALETGTQV 441
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 13/204 (6%)
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
G V A EVF + +D + W +MI NG A DL+ + N+R + +L
Sbjct: 48 GRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAI----LL 103
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
S +LG + R + M ++ N + A+I+ Y + GDI A ++F+ M RDV+
Sbjct: 104 SGYGRLGRVLEARRVFDGM----LERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVS 159
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
++NS++ G + ++A +F +M + + V G +HG ++IF M
Sbjct: 160 SWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGK----AWDIFCKM 215
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVG 267
R+ G+ P ++ + + +G
Sbjct: 216 HRE-GLLPDQSNFASALSAVKGLG 238
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 127/293 (43%), Gaps = 14/293 (4%)
Query: 29 GKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMI 88
G+ G +A ++FD MP D++A MI+ Y +G+ + A +++ + + ++
Sbjct: 45 GRLGRVGEAREVFDAMPR-RDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILL 103
Query: 89 DGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRID 148
G R G + A +F M N I C + Q G + + R + M +
Sbjct: 104 SGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYV----QNGDITMARRLFDAMPSRDVS 159
Query: 149 LNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM 208
+++ Y + A +FE+M ER++ ++ +I+G +A ++F +M
Sbjct: 160 ----SWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKM 215
Query: 209 INQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSR-VG 267
+G+ P + F L+A G +D+ E + + G E + I+++ SR
Sbjct: 216 HREGLLPDQSNFASALSAVKGLGNLDV-LESLRVLALKTGFERDVVIGTAILNVYSRDTS 274
Query: 268 RPEEAYDFITNMKIAPDH---IMLGSLLSACKIHGKLQLGEQIAKRLLDCRSA 317
+ A F +M ++ M+ +L +I + + E+ + + CR+A
Sbjct: 275 VLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTA 327
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/454 (45%), Positives = 287/454 (63%), Gaps = 1/454 (0%)
Query: 35 KDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRN 94
++A +LFD MP C +V + M+ Y + G+++ A +F + KD V W AM+ +
Sbjct: 372 EEAKELFDAMP-CRNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQI 430
Query: 95 GEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG 154
G L LF+EM R N CVLS C+ + ALE G +HS + K + VG
Sbjct: 431 GFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVG 490
Query: 155 GALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIR 214
AL+ MY +CG +++A FEEM+ERDV ++N++IAG A HG EA+E+F M +
Sbjct: 491 NALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTK 550
Query: 215 PTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYD 274
P +T VGVL ACSH GLV+ G F SM RD+G+ + EHY C++DLL R GR +EA +
Sbjct: 551 PDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVN 610
Query: 275 FITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGK 334
+ +M PD M G+LL A +IH +LG A+++ + ++G YVLLSN YASSGK
Sbjct: 611 LMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGK 670
Query: 335 WKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKL 394
W++ ++R M E GV+K PG S IEV N++H F +GD HP+RE IY +++L +K
Sbjct: 671 WRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMKK 730
Query: 395 EGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSM 454
GY +T++VLHD+E+ EKE L HSE+LA+ YG++ P IRV+KNLRVC DCH+
Sbjct: 731 AGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILKIPPGRPIRVIKNLRVCRDCHTA 790
Query: 455 IKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
K I+ I R II+RD NRFHHF +G+CSCGDYW
Sbjct: 791 FKCISAIEGRLIILRDSNRFHHFRDGSCSCGDYW 824
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 151/360 (41%), Gaps = 49/360 (13%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
L+ G D LFDEMP D V+ VMI+ + HGLV A F KD V
Sbjct: 175 LLHALGVSSSLADVRALFDEMP-VKDSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVS 233
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W M+ VRNG + A +LF + ++ +++ Q +E + + + M
Sbjct: 234 WNGMLAAYVRNGRIQEARELF----DSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMP 289
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
+ + + +++ Y+R GD+ +A ++F+ RDV T+ ++++G A +G EA
Sbjct: 290 QRDV----VSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKR 345
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT-RD---------------- 246
+F M ++ V++ ++ A +++ E+F +M R+
Sbjct: 346 VFDAMPDK----NAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGM 401
Query: 247 -------YGIEPQIE--HYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI---MLGSLLSA 294
+G+ PQ + + ++ S++G EE M + + +LS
Sbjct: 402 LDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLST 461
Query: 295 CKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNA----YASSGKWKEAVQIRAKMKEAGV 350
C L+ G Q+ RL+ A G + NA Y G +EA +M+E V
Sbjct: 462 CADIAALECGMQLHSRLI---KAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDV 518
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Query: 22 LKLVELYGKCGEFKDAMQLFDEMPECNDVVA----------------------STVMINC 59
L+L + G+CGE+ + + C D+ A ++
Sbjct: 437 LQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAM 496
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
Y + G +E A F ++ +D V W MI G R+G AL++F M++ + +P+++T+
Sbjct: 497 YFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITL 556
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHR-----IDLNHIVGGALINMYSRCGDIDKALQVF 174
V VL+ACS G +E G I + HR H +I++ R G +D+A+ +
Sbjct: 557 VGVLAACSHSGLVEKG--ISYFYSMHRDFGVATKPEHYT--CMIDLLGRAGRLDEAVNLM 612
Query: 175 EEMK-ERDVTTYNSLIAGLAMHGRS 198
++M E D T + +L+ +H S
Sbjct: 613 KDMPFEPDSTMWGALLGASRIHRNS 637
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 135/328 (41%), Gaps = 48/328 (14%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
+V+ I ++ G V +A +F+ + + T + M+ G NG + +AL FR +
Sbjct: 106 EVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIP 165
Query: 109 R-DNVRPNEVTIVCVLSACSQLG-------------ALELGRWIHSY-------MGKHRI 147
R D+ N T++ L S L ++ I S+ + +H
Sbjct: 166 RPDSFSYN--TLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYF 223
Query: 148 DL----NHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
DL + + ++ Y R G I +A ++F+ E D ++N+L+AG + EA +
Sbjct: 224 DLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQK 283
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
MF +M + + V++ +++ + G + +F D + + IV
Sbjct: 284 MFNKMPQRDV----VSWNTMVSGYARRGDMAEARRLF-----DVAPIRDVFTWTAIVSGY 334
Query: 264 SRVGRPEEAYDFITNMKIAPDHIMLG-SLLSACKIHGKLQLGEQIAKRLLD---CRSADS 319
++ G EEA M PD + + + A + ++ + AK L D CR+ S
Sbjct: 335 AQNGMLEEAKRVFDAM---PDKNAVSWNAMMAAYVQRRMM---EEAKELFDAMPCRNVAS 388
Query: 320 GTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+L YA +G EA I M +
Sbjct: 389 WNTML--TGYAQAGMLDEARAIFGMMPQ 414
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 146 RIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMF 205
+ D+ I I + R G + A ++F M R +TYN+++AG A +GR +A+ F
Sbjct: 102 KPDMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFF 161
Query: 206 REMINQGIRPTKVTFVGVLNACS-HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLS 264
R + RP ++ +L+A L D+ +F M + Y ++ +
Sbjct: 162 RSI----PRPDSFSYNTLLHALGVSSSLADVR-ALFDEMPVKDSVS-----YNVMISSHA 211
Query: 265 RVGRPEEAYDFITNMKIAP--DHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSA-DSGT 321
G A + +AP D + +L+A +G++Q A+ L D R+ D+ +
Sbjct: 212 NHGLVSLARHYF---DLAPEKDAVSWNGMLAAYVRNGRIQE----ARELFDSRTEWDAIS 264
Query: 322 YVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
+ L Y + +EA ++ KM + V
Sbjct: 265 WNALMAGYVQRSQIEEAQKMFNKMPQRDV 293
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/489 (42%), Positives = 297/489 (60%), Gaps = 33/489 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+++H +KLG+ N L+ +Y CG+
Sbjct: 130 EGKQLHCFAVKLGVSDNMYVVPTLINMYTACGD--------------------------- 162
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++ + VF ++ V + A+I L RN AL LFRE+Q ++P +VT++
Sbjct: 163 -----IDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVTML 217
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLS+C+ LG+L+LGRW+H Y+ K+ D V LI+MY++CG +D A+ VF +M +R
Sbjct: 218 VVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKR 277
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++++I A HG +A+ M EM + ++P ++TF+G+L ACSH GLV+ GFE F
Sbjct: 278 DTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEGFEYF 337
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
MT +YGI P I+HYGC+VDLL R GR +EAY FI + I P I+ +LLSAC HG
Sbjct: 338 HGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSACSTHGN 397
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+++G+++ +R+ + + G YV+ SN A GKW + +R M + G K PGCSSIE
Sbjct: 398 VEMGKRVIERIFELDDSHGGDYVIFSNLCARYGKWDDVNHLRKTMIDKGAVKIPGCSSIE 457
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH-DIEDWEKEWALAI 419
VNN +HEF G+ H +++ + EL + +K GY P T +V + D+ED EKE L
Sbjct: 458 VNNVVHEFFAGEGVHSTSTTLHRALDELVKELKSAGYVPDTSLVFYADMEDEEKEIILRY 517
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GL++T P TTIRVVKNLRVC DCH+ K I+ I R+II+RD RFHHF++
Sbjct: 518 HSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHNAAKFISLIFGRQIILRDVQRFHHFKD 577
Query: 480 GTCSCGDYW 488
G CSCGDYW
Sbjct: 578 GKCSCGDYW 586
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 118/234 (50%), Gaps = 17/234 (7%)
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
+E+A ++F ++ + V + M G R + R + FR L
Sbjct: 77 MEHAHQLFDQITQPNIVLFNTMARGYARLNDPLRMITHFRR---------------CLRL 121
Query: 126 CSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTY 185
S++ AL G+ +H + K + N V LINMY+ CGDID + +VF+++ E V Y
Sbjct: 122 VSKVKALAEGKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAY 181
Query: 186 NSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR 245
N++I LA + R+ EA+ +FRE+ G++PT VT + VL++C+ G +DLG +
Sbjct: 182 NAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLG-RWMHEYVK 240
Query: 246 DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
YG + ++ ++D+ ++ G ++A + +M D +++ A HG
Sbjct: 241 KYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMP-KRDTQAWSAIIVAYATHG 293
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/484 (42%), Positives = 289/484 (59%), Gaps = 32/484 (6%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
IHG LK S+ S L +Y K E + A +LFDE PE
Sbjct: 341 IHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPE------------------ 382
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
K W AMI G +NG A+ LFREMQ PN VTI C+LS
Sbjct: 383 --------------KSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILS 428
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
AC+QLGAL LG+W+H + + + V ALI MY++CG I +A ++F+ M +++ T
Sbjct: 429 ACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVT 488
Query: 185 YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT 244
+N++I+G +HG EA+ +F EM+N GI PT VTF+ VL ACSH GLV G EIF SM
Sbjct: 489 WNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMI 548
Query: 245 RDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLG 304
YG EP ++HY C+VD+L R G + A FI M I P + +LL AC+IH L
Sbjct: 549 HRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLA 608
Query: 305 EQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNE 364
++++L + + G +VLLSN +++ + +A +R K+ + K PG + IE+
Sbjct: 609 RTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGET 668
Query: 365 IHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERL 424
H F GD HPQ + I++K+++L+ ++ GY P TE+ LHD+E+ E+E + +HSERL
Sbjct: 669 PHVFTSGDQSHPQVKAIHEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERL 728
Query: 425 AICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSC 484
AI +GLI+T+P T IR++KNLRVC DCH+ KLI+ IT+R I+VRD NRFHHF++G CSC
Sbjct: 729 AIAFGLIATEPGTEIRIIKNLRVCLDCHTATKLISKITERVIVVRDANRFHHFKDGVCSC 788
Query: 485 GDYW 488
GDYW
Sbjct: 789 GDYW 792
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 151/348 (43%), Gaps = 44/348 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +IH K G S+ + LY KCG+ K A LF E
Sbjct: 240 GMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFRE------------------ 281
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
F R D V + AMI G NGE +L LF+E+ + T+V
Sbjct: 282 -----------FRR---PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVS 327
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
++ G L L IH Y K + V AL +YS+ +I+ A ++F+E E+
Sbjct: 328 LVPVS---GHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKS 384
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++N++I+G +G + +A+ +FREM N P VT +L+AC+ G + LG +
Sbjct: 385 LPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLG-KWVH 443
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIH 298
+ R E I ++ + ++ G EA +DF+ + + +++S +H
Sbjct: 444 DLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPK----KNEVTWNTMISGYGLH 499
Query: 299 GKLQLGEQIAKRLLDCRSADSG-TYVLLSNAYASSGKWKEAVQIRAKM 345
G Q I +L+ A + T++ + A + +G KE +I M
Sbjct: 500 GHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSM 547
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 150/326 (46%), Gaps = 38/326 (11%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
++++ + ++ Y + VE+A +VF R+ KDT+ W MI G +N ++ +FR++
Sbjct: 152 SELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDL 211
Query: 108 QRDN-VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
++ R + T++ +L A ++L L LG IHS K + V I++YS+CG
Sbjct: 212 INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK 271
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
I A +F E + D+ YN++I G +G + ++ +F+E++ G + T V ++
Sbjct: 272 IKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPV 331
Query: 227 CSHGGLVDL--GFEI---FQSMTR----------------------DYGIEPQIEHYGCI 259
H L+ G+ + F S T D E + + +
Sbjct: 332 SGHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAM 391
Query: 260 VDLLSRVGRPEEAYDF---ITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRS 316
+ ++ G E+A + N + +P+ + + +LSAC G L LG+ + + RS
Sbjct: 392 ISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLV---RS 448
Query: 317 ADSGTYVLLSNA----YASSGKWKEA 338
D + + +S A YA G EA
Sbjct: 449 TDFESSIYVSTALIGMYAKCGSIAEA 474
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 120/267 (44%), Gaps = 4/267 (1%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
ND+ T + + G + A ++F V+ D + ++ G N +L +F +
Sbjct: 50 NDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLAVFAHL 109
Query: 108 QRD-NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
++ +++PN T +SA S G IH D ++G ++ MY +
Sbjct: 110 RKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWR 169
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLN 225
++ A +VF+ M E+D +N++I+G + +E++++FR++IN+ R T + +L
Sbjct: 170 VEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILP 229
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDH 285
A + + LG +I S+ G + L S+ G+ + A + PD
Sbjct: 230 AVAELQELRLGMQI-HSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFR-RPDI 287
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRLL 312
+ +++ +G+ +L + K L+
Sbjct: 288 VAYNAMIHGYTSNGETELSLSLFKELM 314
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 36/197 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H V S+ L+ +Y KCG +A +LFD MP+ N+V +T MI+ Y
Sbjct: 439 GKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNT-MISGYG 497
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG +G+ AL +F EM + P VT +C
Sbjct: 498 LHG-----------------------------HGQ--EALTIFSEMLNSGIAPTPVTFLC 526
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVG--GALINMYSRCGDIDKALQVFEEMK- 178
VL ACS G ++ G I + M HR V ++++ R G + +ALQ E M
Sbjct: 527 VLYACSHAGLVKEGDEIFNSM-IHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPI 585
Query: 179 ERDVTTYNSLIAGLAMH 195
+ + + +L+ +H
Sbjct: 586 QPGPSVWETLLGACRIH 602
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/524 (40%), Positives = 312/524 (59%), Gaps = 39/524 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +IHG VLK+GL N L+ +YGKC K+A Q+ DE+P C DVV+ M++ Y
Sbjct: 139 GLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIP-CRDVVSWNSMVSVYA 197
Query: 62 EHGLVENAFEV-------------------------------------FSRVKVKDTVCW 84
++G +A E+ F ++ K + W
Sbjct: 198 QNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNVLYVKEMFLKLTKKSVISW 257
Query: 85 TAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGK 144
MI V N A+ L+ +M+ + V P+ V+IV VL A L AL LGR +H + +
Sbjct: 258 NVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAER 317
Query: 145 HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEM 204
++ N ++ ALI+MY++CG + A VF +M+ RDV ++ S+I+ G+ +AV +
Sbjct: 318 KKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAV 377
Query: 205 FREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLS 264
F EM N G+ P + FV VL ACSH GL+D G F M + GI P++EH+ C+VDLL
Sbjct: 378 FAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMA-ECGITPKLEHFACVVDLLG 436
Query: 265 RVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVL 324
R G+ +EAY FI M + PD + G LLSAC+++ + +G A +LL SG YVL
Sbjct: 437 RAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLMLNPEHSGYYVL 496
Query: 325 LSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKK 384
LSN YA +G+W + IR+ M+ G++K PG S++E+N+ +H F+ GD HPQ ++IY++
Sbjct: 497 LSNIYAKAGRWADVAAIRSIMERKGIKKLPGISNVELNDGVHTFLAGDHSHPQSKKIYEE 556
Query: 385 MQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKN 444
+ L +K GY P T+ LHD+E+ +KE+ LA+HSE+LA+ + +I+TKP T IRV KN
Sbjct: 557 LDVLVGKMKELGYMPETDSALHDVEEEDKEYHLAVHSEKLAVAFAIINTKPGTPIRVTKN 616
Query: 445 LRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
LRVC DCH KLI+ I +R+II+RD +RFHHF+ G CSCGDYW
Sbjct: 617 LRVCGDCHVAAKLISKIAEREIIIRDTHRFHHFQEGCCSCGDYW 660
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 174/389 (44%), Gaps = 75/389 (19%)
Query: 3 REIHGQVLK-LGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
+++HG+VL LR N S +KL+ +Y CGE A +FDE+ +
Sbjct: 38 KKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITD--------------- 82
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K+ V + MI V N AL +++ M P+ T C
Sbjct: 83 -----------------KNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPC 125
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL A S+ +L +G IH + K +DLN VG LI MY +C + +A QV +E+ RD
Sbjct: 126 VLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRD 185
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF--EI 239
V ++NS+++ A +GR +A+E+ REM ++P T +L A ++ ++ + E+
Sbjct: 186 VVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNVLYVKEM 245
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACK 296
F +T+ I + ++ + P+EA + M+ + PD + + S+L A
Sbjct: 246 FLKLTKKSVIS-----WNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYG 300
Query: 297 IHGKLQLGEQI-----AKRLL--------------------DCRSA-------DSGTYVL 324
L LG ++ K+LL D R+ D ++
Sbjct: 301 DLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTS 360
Query: 325 LSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
+ +AY G+ ++AV + A+M+ +G+ +
Sbjct: 361 IISAYGKCGQGRDAVAVFAEMRNSGLNPD 389
>gi|326506208|dbj|BAJ86422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 582
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/488 (44%), Positives = 302/488 (61%), Gaps = 4/488 (0%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
++HG K G S+R R L+ Y CG DA ++FD PE D++A ++ Y +
Sbjct: 96 QLHGHAAKRGAASHRRVRNGLIHAYSVCGMLFDARKVFDHGPEV-DMIAWNCLLRGYAQG 154
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN-VRPNEVTIVCV 122
E F+++ +D+V W +I V NGE A+ +FREM N +P+ VT+V V
Sbjct: 155 RDTGALREFFAQMPARDSVSWNTVIAWCVANGEHEEAVAVFREMLASNECQPDRVTLVSV 214
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE-EMKERD 181
+SA + LGAL G W H+Y+ + I+++ + ALINMYS+CG I+ A+ VFE R
Sbjct: 215 ISAIAYLGALAQGLWAHAYVCRKEIEVDEKLSSALINMYSKCGFIEGAVYVFENSCALRS 274
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V T+N+++AG G S A+E+F M + G P K+TF +LNACSHGG V+ G F+
Sbjct: 275 VDTWNAMLAGFTASGCSERALELFTRMESSGFVPNKITFNTLLNACSHGGFVEEGIGYFE 334
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
MT IEP I HYGC+VDL R G E+A + I M + PD + +L+ AC+ +
Sbjct: 335 RMTNSSSIEPDIAHYGCMVDLFCRAGLFEKAEEMIQMMPMEPDAAVWKALVGACRTYSNF 394
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LG++ RL++ D YVLLSN YA G WK ++R M GVQK PG SSIE+
Sbjct: 395 ELGKKAGHRLIEAAPNDHAGYVLLSNIYALDGNWKGVYKVRKLMLNCGVQKVPGSSSIEL 454
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE-KEWALAIH 420
+ IHEFI GD H ++ +Y+ + E+ Q +K+ GY+P T VL DI+D + KE +LA+H
Sbjct: 455 DGVIHEFISGDKSHSRKRDVYEMLSEICQQLKVAGYAPDTSQVLLDIDDEDVKESSLALH 514
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLA+ +GLIST P T IR+VKNLRVC DCH+ IKL++ I R I+VRD NRFH F G
Sbjct: 515 SERLALAFGLISTAPGTPIRIVKNLRVCGDCHNAIKLLSKIYGRCIMVRDANRFHRFREG 574
Query: 481 TCSCGDYW 488
+CSCGDYW
Sbjct: 575 SCSCGDYW 582
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 123/324 (37%), Gaps = 71/324 (21%)
Query: 100 ALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALIN 159
AL LF + R P+ + L+ C++ A +H + K + V LI+
Sbjct: 59 ALRLFDHLLRSGADPDPIAYALALARCARERAYPAAAQLHGHAAKRGAASHRRVRNGLIH 118
Query: 160 MYSRCGDIDKALQVFE-------------------------------EMKERDVTTYNSL 188
YS CG + A +VF+ +M RD ++N++
Sbjct: 119 AYSVCGMLFDARKVFDHGPEVDMIAWNCLLRGYAQGRDTGALREFFAQMPARDSVSWNTV 178
Query: 189 IAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRD- 246
IA +G EAV +FREM+ +P +VT V V++A ++ G + G + R
Sbjct: 179 IAWCVANGEHEEAVAVFREMLASNECQPDRVTLVSVISAIAYLGALAQGLWAHAYVCRKE 238
Query: 247 -------------------------YGIEP-----QIEHYGCIVDLLSRVGRPEEAYDFI 276
Y E ++ + ++ + G E A +
Sbjct: 239 IEVDEKLSSALINMYSKCGFIEGAVYVFENSCALRSVDTWNAMLAGFTASGCSERALELF 298
Query: 277 TNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRS--ADSGTYVLLSNAYAS 331
T M+ P+ I +LL+AC G ++ G +R+ + S D Y + + +
Sbjct: 299 TRMESSGFVPNKITFNTLLNACSHGGFVEEGIGYFERMTNSSSIEPDIAHYGCMVDLFCR 358
Query: 332 SG---KWKEAVQIRAKMKEAGVQK 352
+G K +E +Q+ +A V K
Sbjct: 359 AGLFEKAEEMIQMMPMEPDAAVWK 382
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 74/193 (38%), Gaps = 33/193 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G H V + + + L+ +Y KCG + A+ +F+ V M+ +
Sbjct: 226 QGLWAHAYVCRKEIEVDEKLSSALINMYSKCGFIEGAVYVFENSCALRSVDTWNAMLAGF 285
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G E A E+F+R M+ PN++T
Sbjct: 286 TASGCSERALELFTR-------------------------------MESSGFVPNKITFN 314
Query: 121 CVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
+L+ACS G +E G + I+ + G +++++ R G +KA ++ + M
Sbjct: 315 TLLNACSHGGFVEEGIGYFERMTNSSSIEPDIAHYGCMVDLFCRAGLFEKAEEMIQMMPM 374
Query: 179 ERDVTTYNSLIAG 191
E D + +L+
Sbjct: 375 EPDAAVWKALVGA 387
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/488 (41%), Positives = 302/488 (61%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G++IH V+K+ + ++++Y KCGE K A +
Sbjct: 518 QGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARK--------------------- 556
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
VF+++ D V WT +I G V NGE +AL + +M+ V+P+E T
Sbjct: 557 -----------VFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFA 605
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
++ ACS L ALE G+ IH+ + K + V +L++MY++CG+I+ A +F M R
Sbjct: 606 TLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTR 665
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
V +N++I GLA HG + EA+ F EM ++G+ P +VTF+GVL+ACSH GL ++ F
Sbjct: 666 SVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNF 725
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM + YG+EP+IEHY C+VD LSR G +EA +++M M +LL+AC++ G
Sbjct: 726 DSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGD 785
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+ GE++A++L +DS YVLLSN YA++ +W+ AV R MK V+KEPG S I+
Sbjct: 786 KETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWID 845
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+ N++H F+ GD H + + IY K++ + + +K EGY P TE L DIE+ +KE AL+ H
Sbjct: 846 MKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDTEFALVDIEEEDKESALSYH 905
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI YGL+ T P TT+RV+KNLRVC DCH+ IK I+N+ +R+I++RD NRFHHF +G
Sbjct: 906 SEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRFHHFRSG 965
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 966 ICSCGDYW 973
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 125/526 (23%), Positives = 211/526 (40%), Gaps = 107/526 (20%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
+ G +K+GL+ + LV +Y K ++A LFD MP DVV VM+ YVE G
Sbjct: 144 LQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMP-VRDVVLWNVMMKAYVEMG 202
Query: 65 L---VENAFEVFSRVKVK----------------------------------------DT 81
V F F R ++ D
Sbjct: 203 AGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDV 262
Query: 82 VCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSY 141
W + ++ GE A+D FR+M + V + +T + +LS + L LELG+ IH
Sbjct: 263 TVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGA 322
Query: 142 MGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEA 201
+ + D V + INMY + G ++ A ++F +MKE D+ ++N++I+G A G +
Sbjct: 323 VVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECS 382
Query: 202 VEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVD 261
+ +F +++ G+ P + T VL ACS S+ Y + Q+ + C +
Sbjct: 383 LRLFIDLLRSGLLPDQFTITSVLRACS-------------SLEESYCVGRQV--HTCAL- 426
Query: 262 LLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT 321
+ G I D + +L+ GK++ E + + D +
Sbjct: 427 ---KAG-------------IVLDSFVSTALIDVYSKGGKMEEAELL---FHNQDGFDLAS 467
Query: 322 YVLLSNAYASSGKWKEAVQIRAKMKEAG----------VQKEPGC-SSIEVNNEIHEFIL 370
+ + + + S ++EA+++ + M E G K GC ++ +IH ++
Sbjct: 468 WNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVI 527
Query: 371 GDIRHPQREQI------YKKMQELKQIVKLEGYSPS------TEVVLHDIEDWEKEWAL- 417
H I Y K E+K K+ PS T V+ +E+ E+E AL
Sbjct: 528 KMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALF 587
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITK 463
H RLA + YT +VK + ++ ANI K
Sbjct: 588 TYHQMRLA----GVQPDEYTFATLVKACSLLTALEQGKQIHANIMK 629
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 146/341 (42%), Gaps = 45/341 (13%)
Query: 50 VVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
V + IN YV+ G V A +F ++K D + W +I G R+G +L LF ++ R
Sbjct: 332 VSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLR 391
Query: 110 DNVRPNEVTIVCVLSACSQL-GALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ P++ TI VL ACS L + +GR +H+ K I L+ V ALI++YS+ G ++
Sbjct: 392 SGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKME 451
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+A +F D+ ++N+++ G + EA+ +F M +G + ++TF A
Sbjct: 452 EAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAG 511
Query: 229 -----------HGGLVDLGF------------------------EIFQSMTRDYGIEPQI 253
H ++ + F ++F + +
Sbjct: 512 CLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTT 571
Query: 254 EHYGCIVDLLSRVGRPEEAYDFITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQIAKR 310
GC+ + G E+A M++A PD +L+ AC + L+ G+QI
Sbjct: 572 VISGCVEN-----GEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHAN 626
Query: 311 LLDCRSA-DSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
++ A D L + YA G ++A + +M V
Sbjct: 627 IMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSV 667
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 124/284 (43%), Gaps = 33/284 (11%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D ST +I+ Y + G +E A +F D W AM+ G + AL LF M
Sbjct: 433 DSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMH 492
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ +++T A L L+ G+ IH+ + K R + V +++MY +CG++
Sbjct: 493 ERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMK 552
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +VF ++ D + ++I+G +G +A+ + +M G++P + TF ++ ACS
Sbjct: 553 SARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACS 612
Query: 229 -----------HGGLVDL--GFEIF--QSMTRDYGIEPQIEH---------------YGC 258
H ++ L F+ F S+ Y IE +
Sbjct: 613 LLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNA 672
Query: 259 IVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHG 299
++ L++ G EEA +F MK + PD + +LSAC G
Sbjct: 673 MIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSG 716
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 121/318 (38%), Gaps = 42/318 (13%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ H ++ GL +R L+ +Y KCG A +LFD P+ +
Sbjct: 32 GKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSD------------- 78
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMA------RALDLFREMQRDNVRPN 115
+D V + A++ GE+ A +FR +++ +
Sbjct: 79 -----------------RDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTT 121
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
T+ + C G+ + Y K + + V GAL+N+Y++ I +A +F+
Sbjct: 122 RHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFD 181
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
M RDV +N ++ G E + +F G+RP V+ +L + +
Sbjct: 182 RMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFER 241
Query: 236 GFEIFQSMTRDYGI---EPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLG 289
E ++ + + + + + + G EA D +M ++ D +
Sbjct: 242 ELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYI 301
Query: 290 SLLSACKIHGKLQLGEQI 307
+LS L+LG+QI
Sbjct: 302 VILSVVASLNHLELGKQI 319
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 132 LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE--EMKERDVTTYNSLI 189
L LG+ H+ + ++ + V LI MY++CG + A ++F+ +RD+ TYN+++
Sbjct: 29 LILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAIL 88
Query: 190 AGLAMHG------RSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
A A G ++ EA +FR + + T+ T + C G E Q
Sbjct: 89 AAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSAS-EALQGY 147
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKI 281
G++ + G +V++ ++ R EA M +
Sbjct: 148 AVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPV 185
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 196/436 (44%), Positives = 293/436 (67%)
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
+T +I+ Y + G V+ A ++F + +D V W+AMI G + AL+LF EMQ+ NV
Sbjct: 260 TTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNV 319
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
PNEVT+V VL +C+ LGA E G+W+H Y+ K ++ L +G LI+ Y++CG ID++++
Sbjct: 320 YPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVE 379
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
VF+EM ++V T+ +LI GLA +G A+E F M+ ++P VTF+GVL+ACSH L
Sbjct: 380 VFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACL 439
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
VD G +F SM RD+ IEP+IEHYGC+VD+L R G EEAY FI NM P+ ++ +LL
Sbjct: 440 VDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLL 499
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
++C+ H +++ E+ + + A SG Y+LLSN YA G+ ++A+++R+ +KE ++K
Sbjct: 500 ASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKK 559
Query: 353 EPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE 412
PGCS IE++ +HEF D H ++I+ + ++ + +K GY P+T+ + E+
Sbjct: 560 IPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVPNTDDARLEAEEES 619
Query: 413 KEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRN 472
KE +++ HSE+LAI YGLI T P TTIR+ KNLR+C DCH+ K I+ + +R IIVRDRN
Sbjct: 620 KETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDCHNATKFISQVFERMIIVRDRN 679
Query: 473 RFHHFENGTCSCGDYW 488
RFHHF++G CSC DYW
Sbjct: 680 RFHHFKDGLCSCNDYW 695
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 120/236 (50%), Gaps = 32/236 (13%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG ++H +LK G +SN L+++Y CG+ A +FD MPE
Sbjct: 139 EGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPE-------------- 184
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ V W +M+ G +NG + LFR++ + ++VT++
Sbjct: 185 ------------------RSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMI 226
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL AC +L LE+G I Y+ + N+ + +LI+MY++CG +D A ++F+EM +R
Sbjct: 227 SVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKR 286
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
DV ++++I+G A R EA+ +F EM + P +VT V VL +C+ G + G
Sbjct: 287 DVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETG 342
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 1/214 (0%)
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
++ A +F+ + ++ + MI GL AL LF++M +V+ ++ T VL A
Sbjct: 71 IDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKA 130
Query: 126 CSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTY 185
CS++ AL G +H+ + K N V LI MY+ CG I A VF+ M ER + +
Sbjct: 131 CSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAW 190
Query: 186 NSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR 245
NS+++G +G E V++FR+++ I VT + VL AC +++G E+
Sbjct: 191 NSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIG-ELIGEYIV 249
Query: 246 DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM 279
G+ ++D+ ++ G+ + A M
Sbjct: 250 SKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEM 283
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 116/282 (41%), Gaps = 74/282 (26%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEF--------------------------- 34
G I ++ GLR N + L+++Y KCG+
Sbjct: 241 GELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQ 300
Query: 35 ----KDAMQLFDEMPECN--------------------------------------DVVA 52
K+A+ LF EM + N V
Sbjct: 301 ADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTL 360
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
T +I+ Y + G ++ + EVF + K+ WTA+I GL NGE AL+ F M ++V
Sbjct: 361 GTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDV 420
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG--GALINMYSRCGDIDKA 170
+PN+VT + VLSACS ++ GR + + M + D+ + G ++++ R G +++A
Sbjct: 421 KPNDVTFIGVLSACSHACLVDQGRHLFNSM-RRDFDIEPRIEHYGCMVDILGRAGFLEEA 479
Query: 171 LQVFEEMK-ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ 211
Q + M + + +L+A H ++IE E E I +
Sbjct: 480 YQFIDNMPFPPNAVVWRTLLASCRAH-KNIEMAEKSLEHITR 520
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/488 (43%), Positives = 301/488 (61%), Gaps = 31/488 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H + K GL S + LV LYG CG F+ A ++FDE+P
Sbjct: 141 GEGLHAEACKNGLVSLVFVKNSLVHLYGACGLFESAHRVFDEIPPPE------------- 187
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ V W ++++G NG L +FREM P+ T+V
Sbjct: 188 -----------------RNLVSWNSVLNGFAANGRPNEVLTVFREMLEVEFAPDGFTVVS 230
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-ER 180
VL+AC+++G L LGR +H ++ K + N G ALI++Y++CG +D A ++F EM R
Sbjct: 231 VLTACAEIGVLALGRRVHVFVAKVGLVGNAHAGNALIDLYAKCGGVDDARKMFGEMGVGR 290
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
V ++ SLI GLA++G ++A+++F M + + PT++T VGVL ACSH GLVD GF F
Sbjct: 291 TVVSWTSLIVGLAVNGFGMDALQLFSMMEREKLMPTEITMVGVLYACSHCGLVDDGFRYF 350
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
M +YGI P+IEH GC+VDLL R GR EEA+++IT M + P+ ++ +LL AC +H K
Sbjct: 351 DQMKAEYGITPRIEHLGCMVDLLGRAGRVEEAHNYITTMPLEPNAVVWRTLLGACAMHKK 410
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
L++GE RL++ SG YVLLSN YA G+W + +R M GV+K PG S +E
Sbjct: 411 LEIGEAAWARLVELDPGHSGDYVLLSNLYAGVGRWADVHVLRKTMVTHGVRKNPGHSLVE 470
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+ N ++EF++GD HP+ +QIY+ + ++ + ++ +GY P T VL DIED EKE AL H
Sbjct: 471 LRNSVYEFVMGDRSHPETDQIYEMLGDIAERLRRQGYIPHTSNVLADIEDEEKESALNYH 530
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLAI + L+ + P T IR+VKNLRVC DCH IKLI+ + R+IIVRDR+RFHHF+ G
Sbjct: 531 SERLAIAFALLKSLPGTPIRIVKNLRVCGDCHMAIKLISKVYDREIIVRDRSRFHHFKGG 590
Query: 481 TCSCGDYW 488
CSC DYW
Sbjct: 591 ACSCKDYW 598
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 98/194 (50%), Gaps = 3/194 (1%)
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+R P+ T +L AC++L AL G +H+ K+ + V +L+++Y CG
Sbjct: 114 RRHLAPPDTHTYPPLLQACARLLALRYGEGLHAEACKNGLVSLVFVKNSLVHLYGACGLF 173
Query: 168 DKALQVFEEM--KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
+ A +VF+E+ ER++ ++NS++ G A +GR E + +FREM+ P T V VL
Sbjct: 174 ESAHRVFDEIPPPERNLVSWNSVLNGFAANGRPNEVLTVFREMLEVEFAPDGFTVVSVLT 233
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDH 285
AC+ G++ LG + + + G+ ++DL ++ G ++A M +
Sbjct: 234 ACAEIGVLALGRRVHVFVAK-VGLVGNAHAGNALIDLYAKCGGVDDARKMFGEMGVGRTV 292
Query: 286 IMLGSLLSACKIHG 299
+ SL+ ++G
Sbjct: 293 VSWTSLIVGLAVNG 306
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/491 (42%), Positives = 311/491 (63%), Gaps = 5/491 (1%)
Query: 2 GREIHGQVLKLG-LRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
GR++H Q + +G S+ L+++Y KCG ++FDEM + DV++ T +I Y
Sbjct: 158 GRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLD-RDVISWTSLIVAY 216
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ G +E A E+F + +KD V WTAM+ G +N AL++F MQ V+ +EVT+V
Sbjct: 217 AKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLV 276
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDL--NHIVGGALINMYSRCGDIDKALQVFEEMK 178
V+SAC+QLGA + W+ + N +VG ALI+MY++CG ++ A +VFE M+
Sbjct: 277 GVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERME 336
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
ER+V +Y+S+I G AMHG + A+E+F EM+ I+P +VTF+GVL ACSH G+V+ G +
Sbjct: 337 ERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQ 396
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
+F M +G+ P +HY C+VDLL R GR EEA + + M + P + G+LL AC+IH
Sbjct: 397 LFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIH 456
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
G + + A L + G Y+LLSN YAS+G+W + ++R M+ G++K PGCS
Sbjct: 457 GNPDMAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSW 516
Query: 359 IEVNNE-IHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
+E IHEF GD+ HP+ +I + +++L +K GY P+ V +DI D EK+ L
Sbjct: 517 VEGKKGIIHEFFAGDMSHPKSREIKQALEDLLDRLKYLGYQPNLSSVAYDISDEEKKRLL 576
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LA+ +GL++T TIR+VKNLR+C DCHS++ + IT R+I+VRD RFHHF
Sbjct: 577 MSHSEKLALAFGLLTTNAGCTIRIVKNLRICEDCHSVMCGASQITGREIVVRDNMRFHHF 636
Query: 478 ENGTCSCGDYW 488
+G CSCG++W
Sbjct: 637 RDGRCSCGNFW 647
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 144/350 (41%), Gaps = 83/350 (23%)
Query: 72 VFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGA 131
VF +V+ + WTA+I G G ++ L+ M+R + P T +L ACS
Sbjct: 95 VFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALD 154
Query: 132 LELGRWIHS---YMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
+ LGR +H+ +G DL VG LI+MY +CG + +VF+EM +RDV ++ SL
Sbjct: 155 VNLGRQVHTQTILIGGFGSDL--YVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSL 212
Query: 189 I-------------------------------AGLAMHGRSIEAVEMFREMINQGIRPTK 217
I G A + R EA+E+F M G++ +
Sbjct: 213 IVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDE 272
Query: 218 VTFVGVLNACSHGGLVDLGFEIFQSMTRD------YGIEPQIEHYGCIVDLLSRVGRPEE 271
VT VGV++AC+ LG + + RD +G + ++D+ ++ G E+
Sbjct: 273 VTLVGVISACAQ-----LGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVED 327
Query: 272 AYDFITNM----------------------------------KIAPDHIMLGSLLSACKI 297
AY M +I P+ + +L+AC
Sbjct: 328 AYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSH 387
Query: 298 HGKLQLGEQIAKRLLDCR--SADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
G ++ G+Q+ + +C + Y + + +G+ +EA+ + M
Sbjct: 388 AGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMM 437
>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 650
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/530 (40%), Positives = 316/530 (59%), Gaps = 48/530 (9%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMIN--- 58
G+E+ +K G SN + + ++ CG A ++FD C +VV +M++
Sbjct: 126 GKELLNHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDAC-EVVTWNIMLSGYN 184
Query: 59 ----------------C--------------YVEHGLVENAFE----------VFSRVKV 78
C Y+ G+VE+ F VF +K
Sbjct: 185 RVKQFKISKMLLVLSACSKLKDLEWGKHIFKYINGGIVEHMFAACGEMDEAQGVFDNMKT 244
Query: 79 KDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWI 138
+D V WTAMIDG +R AL LFREMQ NV+P+E T+V +L AC+ LGALELG W+
Sbjct: 245 RDVVSWTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFTMVSILIACALLGALELGEWV 304
Query: 139 HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRS 198
+ + K+ + VG AL++MY +CG++ KA +VF+EM ++D T+ ++I GLA++G
Sbjct: 305 KTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMYQKDKFTWTTMIVGLAINGHG 364
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGC 258
EA+ MF MI + P ++T++GVL AC +VD G F +MT +GI+P + HYGC
Sbjct: 365 EEALAMFSNMIEASVTPDEITYIGVLCAC----MVDKGKSFFTNMTMQHGIKPTVTHYGC 420
Query: 259 IVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSAD 318
+VDLL VG EEA + I NM + P+ I+ GS L AC++H +QL + AK++L+ +
Sbjct: 421 MVDLLGCVGCLEEALEVIVNMPVKPNSIVWGSPLGACRVHKNVQLADMAAKQILELEPEN 480
Query: 319 SGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQR 378
YVLL N YA+S KW+ Q+R M E G++K PGCS +E+N ++EF+ GD HPQ
Sbjct: 481 GAVYVLLCNIYAASKKWENLCQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQS 540
Query: 379 EQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTT 438
++IY K++ + Q + GYSP T V D+ + +KE AL HSE+LAI Y LIS+ P T
Sbjct: 541 KEIYAKLENMMQGLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGVT 600
Query: 439 IRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
IR+VKNLR+C DCH M KL++ R++IV+D+ RFHHF +G+CSC ++W
Sbjct: 601 IRIVKNLRMCVDCHHMAKLVSQAYNRELIVKDKTRFHHFRHGSCSCNNFW 650
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 151/371 (40%), Gaps = 75/371 (20%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
++IH +K+GL S+ R N V+A C E
Sbjct: 24 KQIHSHTIKMGLSSDPLFR--------------------------NRVIA----FCCAHE 53
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
G + A +VF + W MI G + + ++ M N++P+ T
Sbjct: 54 SGNMNYAHQVFDTIPHPSMFIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFS 113
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L ++ AL+ G+ + ++ KH D N V A I+M+S CG +D A +VF+ +V
Sbjct: 114 LKGFTRDMALQHGKELLNHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEV 173
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVT-FVGVLNACS------------- 228
T+N +++G ++ K++ + VL+ACS
Sbjct: 174 VTWNIMLSGY------------------NRVKQFKISKMLLVLSACSKLKDLEWGKHIFK 215
Query: 229 --HGGLVDLGFEIFQSMTRDYGIEPQIE-----HYGCIVDLLSRVGRPEEAYDFITNMKI 281
+GG+V+ F M G+ ++ + ++D R+ A M++
Sbjct: 216 YINGGIVEHMFAACGEMDEAQGVFDNMKTRDVVSWTAMIDGYLRMNHFIGALALFREMQM 275
Query: 282 A---PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV--LLSNAYASSGKWK 336
+ PD + S+L AC + G L+LGE + K +D S + ++V L + Y G +
Sbjct: 276 SNVKPDEFTMVSILIACALLGALELGEWV-KTCIDKNSNKNDSFVGNALVDMYFKCGNVR 334
Query: 337 EAVQIRAKMKE 347
+A ++ +M +
Sbjct: 335 KAKKVFKEMYQ 345
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/486 (43%), Positives = 299/486 (61%), Gaps = 33/486 (6%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
+E+H + GL R LV +Y KCG A Q+FD+M E
Sbjct: 456 KEVHSYAIDAGLVDLRVGN-ALVHMYAKCGNTMYAKQVFDDMVE---------------- 498
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
++ WT MI GL ++G A LF +M R+ + P+ T V +
Sbjct: 499 ----------------RNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSI 542
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
LSAC+ GALE + +HS+ + + VG AL++MY++CG +D A +VF++M ERDV
Sbjct: 543 LSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDV 602
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
++ +I GLA HGR ++A+++F +M +G +P +FV VL+ACSH GLVD G F S
Sbjct: 603 YSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLS 662
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
+T+DYGIEP +EHY C+VDLL R G+ EEA FI NM I P G+LL AC +G L+
Sbjct: 663 LTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLE 722
Query: 303 LGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVN 362
+ E AK L + + TYVLLSN YA++G W++ + +R+ M+ G++KEPG S IEV+
Sbjct: 723 MAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVD 782
Query: 363 NEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSE 422
N+IH F++GD HP+ ++IY K+++L + +K EGY P T +VL + + KE AL HSE
Sbjct: 783 NQIHSFVVGDTSHPESKEIYAKLKDLIKRLKAEGYVPDTRLVLRNTDQEYKEQALCSHSE 842
Query: 423 RLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTC 482
+LAI YGL+ T IRV KNLRVC+DCH+ K I+ +T R+I+ RD RFHHF++G C
Sbjct: 843 KLAIVYGLMHTPYRNPIRVYKNLRVCSDCHTATKFISKVTGREIVARDAKRFHHFKDGVC 902
Query: 483 SCGDYW 488
SCGDYW
Sbjct: 903 SCGDYW 908
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 155/308 (50%), Gaps = 9/308 (2%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+DV T ++N YV+ G +++A +F ++ ++ + WT MI GL G A F +M
Sbjct: 63 SDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQM 122
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
QR+ PN T V +L+A + GALE + +HS+ + L+ VG AL++MY++ G I
Sbjct: 123 QREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSI 182
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
D A VF+ M ERD+ ++ +I GLA HGR EA +F +M G P T++ +LNA
Sbjct: 183 DDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNAS 242
Query: 228 --SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIA 282
+ G ++ E+ + + G + ++ + ++ G ++A +D + + +
Sbjct: 243 AITSTGALEWVKEVHKHAGKA-GFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVI 301
Query: 283 PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIR 342
+ M+G L H + K + DS TY+ L N + S+G W+ ++
Sbjct: 302 SWNAMIGGLAQNGCGHEAFTI---FLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVH 358
Query: 343 AKMKEAGV 350
E G+
Sbjct: 359 KHAVEVGL 366
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 159/345 (46%), Gaps = 51/345 (14%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D+ +I+ Y + G +++A VF + +D + W AMI GL +NG A +F +M
Sbjct: 267 SDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKM 326
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHI----VGGALINMYSR 163
Q++ P+ T + +L+ GA E + +H KH +++ + VG A ++MY R
Sbjct: 327 QQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVH----KHAVEVGLVSDLRVGSAFVHMYIR 382
Query: 164 CGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGV 223
CG ID A +F+++ R+VTT+N++I G+A EA+ +F +M +G P TFV +
Sbjct: 383 CGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNI 442
Query: 224 LNA----------------CSHGGLVDL-------------GFEIFQSMTRDYGIEPQIE 254
L+A GLVDL G ++ D +E +
Sbjct: 443 LSANVGEEALEWVKEVHSYAIDAGLVDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVT 502
Query: 255 HYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQI---- 307
+ ++ L++ G EA+ M I PD S+LSAC G L+ +++
Sbjct: 503 TWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHA 562
Query: 308 --AKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
A + D R ++ L + YA G +A ++ M E V
Sbjct: 563 VNAGLVSDLRVGNA-----LVHMYAKCGSVDDARRVFDDMLERDV 602
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 116/219 (52%), Gaps = 8/219 (3%)
Query: 87 MIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHR 146
MI G G A+ ++ +M+R+ +PNE+T + +L AC +L+ G+ IH+++ +
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 147 IDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
+ V AL+NMY +CG ID A +F++M ER+V ++ +I GLA +GR EA F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 207 EMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRV 266
+M +G P T+V +LNA + G ++ E+ S + G+ + +V + ++
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEV-HSHAVNAGLALDLRVGNALVHMYAKS 179
Query: 267 GRPEEA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
G ++A +D + I +M+G L HG+ Q
Sbjct: 180 GSIDDARVVFDGMVERDIFSWTVMIGGLAQ----HGRGQ 214
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/493 (41%), Positives = 319/493 (64%), Gaps = 5/493 (1%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPE---CNDVVASTVMI 57
E E++ ++K ++ + ST + +V + G + QL + + +++ V+I
Sbjct: 180 EALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLI 239
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y + G VE A +F + KD + W +I G AL LF+EM R PN+V
Sbjct: 240 DLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDV 299
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG--GALINMYSRCGDIDKALQVFE 175
T++ VL AC+ LGA+++GRWIH Y+ K + + +LI+MY++CGDI+ A QVF+
Sbjct: 300 TMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFD 359
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
M R ++++N++I G AMHG++ A ++F +M GI P +TFVG+L+ACSH G++DL
Sbjct: 360 SMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDL 419
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G IF+SM++DY I P++EHYGC++DLL G +EA + I M + PD ++ SLL AC
Sbjct: 420 GRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKAC 479
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
K+H ++LGE A+ L+ + G+YVLLSN YA++G+W + +IR + + G++K PG
Sbjct: 480 KMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPG 539
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
CSSIE+++ +HEFI+GD HP+ +IY+ ++E++ +++ G+ P T VL ++E+ KE
Sbjct: 540 CSSIEIDSVVHEFIIGDKFHPRNREIYRMLEEMEMLMEETGFVPDTSEVLQEMEEEWKEG 599
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
AL HSE+LAI +GLISTKP T + +VKNLRVC +CH KLI+ I KR+II RDR R H
Sbjct: 600 ALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRLH 659
Query: 476 HFENGTCSCGDYW 488
++G SC DYW
Sbjct: 660 LLKDGVWSCHDYW 672
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 180/346 (52%), Gaps = 36/346 (10%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG++IHG VLKLG + L+ +Y + G +DA ++FD VV+ T +I Y
Sbjct: 83 EGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSH-RHVVSYTALITGY 141
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G + NA ++F + VKD V W AMI G V AL+L+++M + NV+P+E T+V
Sbjct: 142 ASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMV 201
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+SAC+Q G++ELGR +HS++ H N + LI++YS+CG+++ A +F+ + ++
Sbjct: 202 TVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKK 261
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG---- 236
DV ++N+LI G EA+ +F+EM+ G P VT + VL AC+H G +D+G
Sbjct: 262 DVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIH 321
Query: 237 -------------FEIFQSMTRDYGIEPQIEHYGCIVD-LLSRV--------------GR 268
+ S+ Y IE + D +L+R G+
Sbjct: 322 VYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGK 381
Query: 269 PEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
A+D + M+ I PD I LLSAC G L LG I + +
Sbjct: 382 ANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSM 427
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 148/346 (42%), Gaps = 71/346 (20%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A +F ++ + + W M G N + AL L+ M + PN + +L +C++
Sbjct: 18 AISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAK 77
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
AL G+ IH ++ K DL+ V +LI+MY++ G ++ A +VF+ R V +Y +L
Sbjct: 78 SKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTAL 137
Query: 189 IAGLAMHG-----RSI--------------------------EAVEMFREMINQGIRPTK 217
I G A G R + EA+E++++M+ ++P +
Sbjct: 138 ITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDE 197
Query: 218 VTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFI- 276
T V V++AC+ G ++LG ++ S D+G I+ ++DL S+ G E A
Sbjct: 198 STMVTVVSACAQSGSIELGRQL-HSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQ 256
Query: 277 -----------------TNMKI----------------APDHIMLGSLLSACKIHGKLQL 303
T+M + +P+ + + S+L AC G + +
Sbjct: 257 GLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDI 316
Query: 304 GE----QIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
G I KRL +A S L+ + YA G + A Q+ M
Sbjct: 317 GRWIHVYINKRLKGVTNASSLLTSLI-DMYAKCGDIEAAKQVFDSM 361
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/452 (44%), Positives = 295/452 (65%), Gaps = 9/452 (1%)
Query: 45 PECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEM------- 97
P C+ V + ++N Y + G V +F+++ D W +++ V N
Sbjct: 140 PTCDPFVQAA-LLNYYAKCGKVGACRYLFNQISKPDLASWNSILSAYVHNSGAICEDVSL 198
Query: 98 -ARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGA 156
L LF EMQ+ ++ NEVT+V ++SAC++LGAL G W H Y+ KH + LNH VG A
Sbjct: 199 SLEVLTLFIEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTA 258
Query: 157 LINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPT 216
LI+MYS+CG +D A Q+F+++ RD YN++I G A+HG +A+++F++M +G+ P
Sbjct: 259 LIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPD 318
Query: 217 KVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFI 276
VT V + +CSH GLV+ G ++F+SM YG+EP++EHYGC+VDLL R GR EA + +
Sbjct: 319 DVTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERV 378
Query: 277 TNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWK 336
NM + P+ ++ SLL A ++HG L++GE + K L+ SG YVLLSN YAS +W
Sbjct: 379 LNMPMKPNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWD 438
Query: 337 EAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEG 396
+ ++R MK+ G+ K PG S +EV +HEF++GD HP+ ++IY K++E+ + + G
Sbjct: 439 DVKRVRKLMKDHGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIYLKLEEMSRRLHEYG 498
Query: 397 YSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIK 456
+ P T VL DIE+ EKE AL+ HSERLAI + LI++ IR++KNLRVC DCH+ K
Sbjct: 499 HKPRTLEVLFDIEEEEKEDALSYHSERLAIAFALIASHHCAPIRIIKNLRVCGDCHTSSK 558
Query: 457 LIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
LI+ I +R+IIVRDRNRFHHF+ G CSC DYW
Sbjct: 559 LISKIYEREIIVRDRNRFHHFKEGACSCSDYW 590
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 130/301 (43%), Gaps = 19/301 (6%)
Query: 68 NAFEVFSRVKVKDTVCWTAMIDGLVRNGEMAR-ALDLF-REMQRDNVRPNEVTIVCVLSA 125
+A +F+ + + +I L A L+ R + ++PN T + A
Sbjct: 58 HALSIFNHIPNPTIFLYNTLISSLANIKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFKA 117
Query: 126 CSQLGALELGRWIHSYMGKH-RIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
C L GR +H+++ K + V AL+N Y++CG + +F ++ + D+ +
Sbjct: 118 CGSQPWLRHGRALHTHVLKFLEPTCDPFVQAALLNYYAKCGKVGACRYLFNQISKPDLAS 177
Query: 185 YNSLIAGLAMH--------GRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
+NS+++ + S+E + +F EM I+ +VT V +++AC+ G + G
Sbjct: 178 WNSILSAYVHNSGAICEDVSLSLEVLTLFIEMQKSLIKANEVTLVALISACAELGALSQG 237
Query: 237 FEIFQSMTRDYGIEPQIEHY--GCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
+ + ++ H+ ++D+ S+ G + A + D + +++
Sbjct: 238 AWAHVYVLKH---NLKLNHFVGTALIDMYSKCGCLDLACQLFDQLP-HRDTLCYNAMIGG 293
Query: 295 CKIHGKLQLGEQIAKRL-LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA-GVQK 352
IHG + K++ L+ + D T V+ + + G +E + MKE GV+
Sbjct: 294 FAIHGYGHQALDLFKKMTLEGLAPDDVTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEP 353
Query: 353 E 353
+
Sbjct: 354 K 354
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 107/274 (39%), Gaps = 79/274 (28%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G H VLK L+ N L+++Y KCG A QLFD++P D + MI +
Sbjct: 236 QGAWAHVYVLKHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQLPH-RDTLCYNAMIGGF 294
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG +ALDLF++M + + P++VT+V
Sbjct: 295 AIHGYGH-------------------------------QALDLFKKMTLEGLAPDDVTLV 323
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-- 178
+ +CS +G +E G VFE MK
Sbjct: 324 VTMCSCSHVGLVEEG-----------------------------------CDVFESMKEV 348
Query: 179 ---ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
E + Y L+ L GR EA E ++N ++P V + +L A G +++
Sbjct: 349 YGVEPKLEHYGCLVDLLGRAGRLREAEE---RVLNMPMKPNAVIWRSLLGAARVHGNLEI 405
Query: 236 GFEIFQSMTRDYGIEPQIE-HYGCIVDLLSRVGR 268
G + + + + +EP+ +Y + ++ + + R
Sbjct: 406 GEVVLKHLIQ---LEPETSGNYVLLSNMYASINR 436
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/464 (43%), Positives = 295/464 (63%), Gaps = 7/464 (1%)
Query: 31 CGEFKDAMQ------LFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCW 84
C + D Q L D++ +DV +I+ Y + V+ A E+F ++ K V W
Sbjct: 387 CADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSW 446
Query: 85 TAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGK 144
AMI G +NG + A+D F +MQ N++P+ T+V V+ A ++L L +WIH + +
Sbjct: 447 NAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIR 506
Query: 145 HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEM 204
+D N V AL++MY++CG + A ++F+ M ER VTT+N++I G HG A+E+
Sbjct: 507 TCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALEL 566
Query: 205 FREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLS 264
F +M + I+P +VTF+ VL+ACSH GLV+ GF+ F SM +DYG+EP ++HYG +VDLL
Sbjct: 567 FEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLG 626
Query: 265 RVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVL 324
R R EA+DFI M I P + G++L AC+IH ++LGE+ A R+ D D G +VL
Sbjct: 627 RANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVL 686
Query: 325 LSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKK 384
L+N YA++ W + ++R M++ G+QK PG S +E+ NE+H F G HPQ ++IY
Sbjct: 687 LANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAF 746
Query: 385 MQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKN 444
++ L +K GY P T V HD+ED KE L HSE+LAI + L++T P TTI + KN
Sbjct: 747 LETLGNRIKAAGYMPDTNSV-HDVEDVVKEQLLNSHSEKLAIAFSLLNTSPGTTIHLRKN 805
Query: 445 LRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
LRVC DCH+ K I+ +TKR+IIVRD RFHHF++GTCSCGDYW
Sbjct: 806 LRVCGDCHNATKYISLVTKREIIVRDMRRFHHFKDGTCSCGDYW 849
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 115/190 (60%)
Query: 47 CNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
++V A T ++N Y + LVE A+++F R+ +D VCW +I G +NG AL+L
Sbjct: 207 ASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLR 266
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
MQ + RP+ +TIV +L A + +G+L +GR IH Y + + V AL++MYS+CG
Sbjct: 267 MQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGS 326
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+ A +F+ M + V ++NS+I G +G A+E+F++M+++ + T VT +G L+A
Sbjct: 327 VGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHA 386
Query: 227 CSHGGLVDLG 236
C+ G V+ G
Sbjct: 387 CADLGDVEQG 396
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 166/349 (47%), Gaps = 39/349 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR IHG ++ G S + LV++Y KCG
Sbjct: 295 GRSIHGYSMRAGFESFVNVSTALVDMYSKCGS---------------------------- 326
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
V A +F R+ K V W +MIDG V+NG+ A+++F++M + V VT++
Sbjct: 327 ----VGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMG 382
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
L AC+ LG +E GR++H + + + + V +LI+MYS+C +D A ++FE ++ +
Sbjct: 383 ALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKT 442
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++N++I G A +GR EA++ F +M Q I+P T V V+ A + ++ I
Sbjct: 443 LVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHG 502
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIH 298
+ R ++ + +VD+ ++ G A +D + + + M+ +
Sbjct: 503 LVIRT-CLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGK 561
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
L+L E++ K ++ + T++ + +A + SG +E Q MK+
Sbjct: 562 AALELFEKMKKEVI---KPNEVTFLCVLSACSHSGLVEEGFQYFGSMKK 607
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 104/214 (48%), Gaps = 1/214 (0%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
T +++ + + G + A VF ++ K + M+ G RN + A+ F M+ D VR
Sbjct: 113 TKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVR 172
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
P +L C L G+ IH + + N ++NMY++C +++A ++
Sbjct: 173 PVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKM 232
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV 233
F+ M ERD+ +N++I+G A +G A+E+ M +G RP +T V +L A + G +
Sbjct: 233 FDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSL 292
Query: 234 DLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
+G I R G E + +VD+ S+ G
Sbjct: 293 RIGRSIHGYSMRA-GFESFVNVSTALVDMYSKCG 325
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 44/202 (21%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+ + IHG V++ L N LV++Y KCG A +LFD M E V MI+ Y
Sbjct: 496 QAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDE-RHVTTWNAMIDGY 554
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HGL + A L+LF +M+++ ++PNEVT +
Sbjct: 555 GTHGLGKAA-------------------------------LELFEKMKKEVIKPNEVTFL 583
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRID------LNHIVGGALINMYSRCGDIDKALQVF 174
CVLSACS G +E G Y G + D ++H GA++++ R +++A
Sbjct: 584 CVLSACSHSGLVEEG---FQYFGSMKKDYGLEPAMDHY--GAMVDLLGRANRLNEAWDFI 638
Query: 175 EEMK-ERDVTTYNSLIAGLAMH 195
++M E ++ + +++ +H
Sbjct: 639 QKMPIEPAISVFGAMLGACRIH 660
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/452 (44%), Positives = 306/452 (67%), Gaps = 1/452 (0%)
Query: 37 AMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGE 96
A +LF ++ N VV T MI+ Y G VE+A +F +++ KD VCW+AMI G + +
Sbjct: 2 AQKLFTKISSRNLVVL-TAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDK 60
Query: 97 MARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGA 156
AL+LF EMQ ++P++VTI+ V+SAC++LG L+ +WIH Y+ K+ + V A
Sbjct: 61 PQEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNA 120
Query: 157 LINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPT 216
LI+MY++CG++ A VFE+M+ R+V ++ S+I A+HG + A++ F +M ++ I+P
Sbjct: 121 LIDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPN 180
Query: 217 KVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFI 276
VTFVGVL ACSH GLV+ G F SMT ++ I P+ EHYGC+VDL R +A + +
Sbjct: 181 GVTFVGVLYACSHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELV 240
Query: 277 TNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWK 336
M +AP+ ++ GSL++AC+IHG+ +LGE AK++L+ G V LSN YA +W+
Sbjct: 241 ETMPLAPNVVIWGSLMAACQIHGENELGEFAAKQVLELEPDHDGALVQLSNIYAKDRRWQ 300
Query: 337 EAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEG 396
+ ++R MK+ G+ KE GCS IE+NN+++EF++ D +H Q ++IY+K+ E+ + +KL G
Sbjct: 301 DVGELRNLMKQRGISKERGCSRIELNNQVYEFVMADKKHKQADKIYEKLDEVVKELKLVG 360
Query: 397 YSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIK 456
Y+P+T VL D+E+ K+ + HSE+LA+CYGL+ + IR+VKNLRVC DCH+ IK
Sbjct: 361 YTPNTRSVLVDVEEEGKKEVVLWHSEKLALCYGLMGEGKGSCIRIVKNLRVCEDCHTFIK 420
Query: 457 LIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
L++ + +IIVRDR RFHH++ G CSC DYW
Sbjct: 421 LVSKVYGMEIIVRDRTRFHHYKAGVCSCNDYW 452
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 89/196 (45%), Gaps = 34/196 (17%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
IH V K GL L+++Y KCG A +F++M + +V++ T MIN + HG
Sbjct: 102 IHMYVDKNGLGGALPVNNALIDMYAKCGNLGAARGVFEKM-QSRNVISWTSMINAFAIHG 160
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
N AL F +M+ +N++PN VT V VL
Sbjct: 161 DASN-------------------------------ALKFFYQMKDENIKPNGVTFVGVLY 189
Query: 125 ACSQLGALELGRWIHSYM-GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-ERDV 182
ACS G +E GR + M +H I H G +++++ R + AL++ E M +V
Sbjct: 190 ACSHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELVETMPLAPNV 249
Query: 183 TTYNSLIAGLAMHGRS 198
+ SL+A +HG +
Sbjct: 250 VIWGSLMAACQIHGEN 265
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 205/487 (42%), Positives = 307/487 (63%), Gaps = 33/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H ++K GL S+ LV ++ CG+ A LF++MP+ D+V+ +I +V
Sbjct: 533 GKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPK-RDLVSWNTIIAGFV 591
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+HG + AF D F+ MQ ++P+++T
Sbjct: 592 QHGKNQVAF-------------------------------DYFKMMQESGIKPDKITFTG 620
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+AC+ AL GR +H+ + + D + +VG LI+MY++CG I+ A QVF ++ +++
Sbjct: 621 LLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKN 680
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ S+IAG A HGR EA+E+F +M +G++P +TFVG L+AC+H GL++ G FQ
Sbjct: 681 VYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQ 740
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM +++ IEP++EHYGC+VDL R G EA +FI M++ PD + G+LL AC++H +
Sbjct: 741 SM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNV 799
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+L E+ A++ L+ D+G +V+LSN YA++G WKE ++R M + GV K+PG S IEV
Sbjct: 800 ELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEV 859
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ ++H F D HPQ E+I+ +++ L ++ GY P T VLHD+ED EKE AL HS
Sbjct: 860 DGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHS 919
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ERLAI YGL+ T P T I + KNLRVC DCH+ K I+ ITKR+II RD NRFHHF++G
Sbjct: 920 ERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGV 979
Query: 482 CSCGDYW 488
CSCGD+W
Sbjct: 980 CSCGDFW 986
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 203/438 (46%), Gaps = 68/438 (15%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G I+ + K G++ + R L+ +Y KCG A Q+FD+M E DV + +++ Y
Sbjct: 128 DGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMRE-KDVYSWNLLLGGY 186
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V+HGL E AF+ L +M +D+V+P++ T V
Sbjct: 187 VQHGLYEEAFK-------------------------------LHEQMVQDSVKPDKRTFV 215
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L+AC+ ++ GR +++ + K D + VG ALINM+ +CGDI A +VF+ + R
Sbjct: 216 SMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTR 275
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D+ T+ S+I GLA HGR +A +F+ M +G++P KV FV +L AC+H ++ G ++
Sbjct: 276 DLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVH 335
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRV-------------------------------GRP 269
M ++ G + +I I+ + ++ GR
Sbjct: 336 ARM-KEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRI 394
Query: 270 EEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC-RSADSGTYVLL 325
+EA+ F M I P+ + S+L AC L+ G+QI +++ +D L
Sbjct: 395 DEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTAL 454
Query: 326 SNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKM 385
+ YA G K+A ++ K+ + V + V +E ++ L + +E I
Sbjct: 455 LSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNS 514
Query: 386 QELKQIVKLEGYSPSTEV 403
I+ + S S E+
Sbjct: 515 STFTSILNVCKSSDSLEL 532
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 191/358 (53%), Gaps = 17/358 (4%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPEC---NDVVASTVMI 57
E ++H Q+++ ++ ++ T + ++ +L++ + + D+ T +I
Sbjct: 194 EAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALI 253
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
N +++ G + +A +VF + +D V WT+MI GL R+G +A +LF+ M+ + V+P++V
Sbjct: 254 NMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKV 313
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
V +L AC+ ALE G+ +H+ M + D VG A+++MY++CG ++ AL+VF+ +
Sbjct: 314 AFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLV 373
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
K R+V ++ ++IAG A HGR EA F +MI GI P +VTF+ +L ACS + G
Sbjct: 374 KGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQ 433
Query: 238 EIFQSMTR-DYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLS 293
+I + YG + ++ ++ + ++ G ++A ++ I+ + + M+ + +
Sbjct: 434 QIQDHIIEAGYGSDDRVR--TALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQ 491
Query: 294 ACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASS-----GKWKEAVQIRAKMK 346
+ L + + K + +S T+ + N SS GKW + ++A ++
Sbjct: 492 HEQYDNALATFQALLKEGI---KPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLE 546
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 146/306 (47%), Gaps = 14/306 (4%)
Query: 78 VKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRW 137
+KDT A+++ L + G+ A+ + + +++ T +L C + L G
Sbjct: 72 IKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGER 131
Query: 138 IHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR 197
I++++ K + + + LINMY++CG+ A Q+F++M+E+DV ++N L+ G HG
Sbjct: 132 IYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGL 191
Query: 198 SIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYG 257
EA ++ +M+ ++P K TFV +LNAC+ VD G E++ + + G + +
Sbjct: 192 YEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILK-AGWDTDLFVGT 250
Query: 258 CIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL-LDCRS 316
++++ + G +A N+ D + S+++ HG+ + + +R+ +
Sbjct: 251 ALINMHIKCGDIGDATKVFDNLP-TRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQ 309
Query: 317 ADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE-----------PGCSSIEVNNEI 365
D +V L A ++ ++ A+MKE G E C S+E E+
Sbjct: 310 PDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEV 369
Query: 366 HEFILG 371
+ + G
Sbjct: 370 FDLVKG 375
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 33/196 (16%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR +H + + + L+ +Y KCG +DA Q+F ++P+ N V + T MI Y
Sbjct: 633 EGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKN-VYSWTSMIAGY 691
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+HG R E AL+LF +MQ++ V+P+ +T V
Sbjct: 692 AQHG----------------------------RGKE---ALELFYQMQQEGVKPDWITFV 720
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
LSAC+ G +E G M + I+ G +++++ R G +++A++ +M+ E
Sbjct: 721 GALSACAHAGLIEEGLHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVE 780
Query: 180 RDVTTYNSLIAGLAMH 195
D + +L+ +H
Sbjct: 781 PDSRVWGALLGACQVH 796
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/478 (43%), Positives = 312/478 (65%), Gaps = 15/478 (3%)
Query: 22 LKLVELYGKCGEFKD---AMQLFDEMPECND---VVASTVMINCYVEHGLVENAFEVFSR 75
+ + L C E KD M+L + E + V + ++N Y + G ++ A +VF +
Sbjct: 181 VTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQ 240
Query: 76 VKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR-DNVRPNEVTIVCVLSACSQLGALEL 134
+ KD W+A+I G V+N AL LFRE+ N+RPNEVTI+ V+SAC+QLG LE
Sbjct: 241 LSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLET 300
Query: 135 GRWIHSYMGK----HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIA 190
GRW+H Y+ + H + LN+ +LI+M+S+CGDID A ++F+ M +D+ ++NS++
Sbjct: 301 GRWVHDYITRTQKGHSVSLNN----SLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVN 356
Query: 191 GLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIE 250
GLA+HG EA+ F M ++P ++TF+GVL ACSH GLV G ++F + YG+
Sbjct: 357 GLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVR 416
Query: 251 PQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKR 310
+ EHYGC+VDLL R G EA +FI M + PD + GS+L AC+++ L+LGE+ A+
Sbjct: 417 LKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARC 476
Query: 311 LLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFIL 370
LL+ + G Y+LLSN YA W E ++R M E G+QK PGCSS+ ++N H F+
Sbjct: 477 LLELEPTNDGVYILLSNIYARRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLA 536
Query: 371 GDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGL 430
GD HP+ +I ++++++ +KL GY T VL +I+D +KE +++ HSE+LA+CYGL
Sbjct: 537 GDCSHPEIAEISIMLRQVREKLKLVGYVADTSEVLLNIDDNKKEESVSQHSEKLALCYGL 596
Query: 431 ISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
+ ++ I ++KNLRVC+DCH++IKL++ I +R+I +RDRNRFHHF++G+CSC DYW
Sbjct: 597 LKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 157/299 (52%), Gaps = 35/299 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +HGQV+K L S+ L+ +Y CG+ K A LF+ M N VV
Sbjct: 98 GKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVV---------- 147
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
WT+MI G ++N AL L+++M+ D P+EVT+
Sbjct: 148 ----------------------WTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMAT 185
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
++SAC++L L +G +HS++ + + + ++G AL+NMY++CGD+ A QVF+++ ++D
Sbjct: 186 LVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKD 245
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMI-NQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
V +++LI G + RS EA+++FRE+ +RP +VT + V++AC+ G ++ G +
Sbjct: 246 VYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVH 305
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+TR + ++D+ S+ G + A +M D I S+++ +HG
Sbjct: 306 DYITRTQK-GHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSY-KDLISWNSMVNGLALHG 362
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 90/169 (53%), Gaps = 3/169 (1%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPNEVTIVCVLSACS 127
A+ VF+ +V D + W +M+ V + RAL + EM +R P+ T +L C+
Sbjct: 31 AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90
Query: 128 QLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNS 187
L ++G+ +H + K+ + + + L+NMY+ CGD+ A +FE M R+ + S
Sbjct: 91 LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150
Query: 188 LIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
+I+G + EA+ ++++M G P +VT +++AC+ L DLG
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAE--LKDLG 197
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/500 (41%), Positives = 309/500 (61%), Gaps = 14/500 (2%)
Query: 2 GREIHGQVLKLG-LRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVM--IN 58
GREIHG +K+ L S+ LV+ Y KC + A + F + + D+V+ M +
Sbjct: 231 GREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQ-TDLVSWNAMLAVT 289
Query: 59 CYVEHGLVENAFE----------VFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
+ ++G + A E VFS + +D V W ++I ++G ALDL REM
Sbjct: 290 GFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMN 349
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
NV N VT+V L ACS+L AL G+ IH ++ + +D + + +LI+MY RCG I
Sbjct: 350 LSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQ 409
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
K+ ++F+ M +RD+ ++N +I+ MHG ++AV +F++ G++P +TF +L+ACS
Sbjct: 410 KSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACS 469
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GL++ G++ F+ M +Y ++P +E Y C+VDLLSR G+ E +FI M P+ +
Sbjct: 470 HSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVW 529
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
GSLL AC+IH L E A+ L + SG YVL++N Y+++G+W++A +IR MKE
Sbjct: 530 GSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKER 589
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
GV K PGCS IEV ++H F++GD HP EQI KM+ L +K GY P T VL D+
Sbjct: 590 GVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDV 649
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
++ EKE++L HSE++A+ +GLIST T +R++KNLRVC DCHS K I+ + KR II+
Sbjct: 650 DEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIM 709
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD RFHHF +G CSCGDYW
Sbjct: 710 RDNYRFHHFVDGVCSCGDYW 729
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/423 (24%), Positives = 175/423 (41%), Gaps = 111/423 (26%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G++++ +L +G N + +++++ KCG A + F+E+ E DV +M++
Sbjct: 130 GKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEI-EFKDVFMWNIMVS--- 185
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G GE +AL++FR+M + V+PN +TI
Sbjct: 186 ----------------------------GYTSKGEFKKALNVFRKMVLEGVKPNSITIAS 217
Query: 122 VLSACSQLGALELGRWIHSYMGK-HRIDLNHIVGGALINMYSRC---------------- 164
+SAC+ L L GR IH Y K +D + +VG +L++ Y++C
Sbjct: 218 AVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQT 277
Query: 165 -----------------GDIDKALQ----------VFEEMKERDVTTYNSLIAGLAMHGR 197
GD AL+ VF E+ RDV +NS+I+ A GR
Sbjct: 278 DLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGR 337
Query: 198 SIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR------DYGIEP 251
S+ A+++ REM + VT V L ACS + G EI Q + R ++ +
Sbjct: 338 SVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNS 397
Query: 252 QIEHYG-C--------IVDLLSRV---------------GRPEEAYDFIT---NMKIAPD 284
I+ YG C I DL+ + G +A + M + P+
Sbjct: 398 LIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPN 457
Query: 285 HIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT--YVLLSNAYASSGKWKEAVQIR 342
HI +LLSAC G ++ G + K + + D Y + + + +G++ E ++
Sbjct: 458 HITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFI 517
Query: 343 AKM 345
KM
Sbjct: 518 EKM 520
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 159/337 (47%), Gaps = 25/337 (7%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
++ Y + G VE+A +F ++ ++ WTA+++ G+ + LF M + VRP+
Sbjct: 51 LLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPD 110
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
V ACS+L +G+ ++ YM + N V G++++M+ +CG +D A + FE
Sbjct: 111 HFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFE 170
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
E++ +DV +N +++G G +A+ +FR+M+ +G++P +T ++AC++ L+
Sbjct: 171 EIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRH 230
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIML---- 288
G EI + ++ + +VD ++ E A + I + + ML
Sbjct: 231 GREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTG 290
Query: 289 ----GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAK 344
G +A + ++ + + L + D + + +A A SG+ A+ + +
Sbjct: 291 FTQYGDGKAALEFFQRMHIACSVFSEL---STRDVVVWNSIISACAQSGRSVNALDLLRE 347
Query: 345 MKEAGVQKE--------PGCSSIEV---NNEIHEFIL 370
M + V+ P CS + EIH+FI+
Sbjct: 348 MNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFII 384
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 36/198 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+EIH +++ GL + L+++YG+CG + + ++FD MP+ D+V+ VMI+ Y
Sbjct: 375 QGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQ-RDLVSWNVMISVY 433
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG + A++LF++ + ++PN +T
Sbjct: 434 GMHGFGMD-------------------------------AVNLFQQFRTMGLKPNHITFT 462
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG--GALINMYSRCGDIDKALQVFEEMK 178
+LSACS G +E G W + M K ++ V ++++ SR G ++ L+ E+M
Sbjct: 463 NLLSACSHSGLIEEG-WKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMP 521
Query: 179 -ERDVTTYNSLIAGLAMH 195
E + + SL+ +H
Sbjct: 522 FEPNAAVWGSLLGACRIH 539
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 116/245 (47%), Gaps = 40/245 (16%)
Query: 110 DNVRPNEVTIV--CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
D P+E + +L C +L L LG +H+ + + +D+ +G L+ +Y + G +
Sbjct: 2 DLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCV 61
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+ A ++F++M ER+V ++ +++ G E +++F M+N+G+RP F V AC
Sbjct: 62 EDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKAC 121
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
S ++++Y RVG+ + YD++ ++ + +
Sbjct: 122 S-----------------------ELKNY--------RVGK--DVYDYMLSIGFEGNSCV 148
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLL-DCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
GS+L G++ IA+R + D + ++ + Y S G++K+A+ + KM
Sbjct: 149 KGSILDMFIKCGRM----DIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMV 204
Query: 347 EAGVQ 351
GV+
Sbjct: 205 LEGVK 209
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/524 (40%), Positives = 313/524 (59%), Gaps = 38/524 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +IH V+++GL N L+ +YGKCG +A ++ DZMP C DVV+ ++
Sbjct: 1145 GMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMP-CRDVVSWNSLVAGCA 1203
Query: 62 EHGLVENAFEV-------------------------------------FSRVKVKDTVCW 84
+G ++A EV F ++ K V W
Sbjct: 1204 RNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSW 1263
Query: 85 TAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGK 144
MI + N A A+D+F +M+ V P+ ++I VL AC L AL LGR IH Y+ +
Sbjct: 1264 NVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVR 1323
Query: 145 HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEM 204
R+ N ++ ALI+MY++CG ++ A +VF++MK RDV ++ S+I+ M+G+ +AV +
Sbjct: 1324 KRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSL 1383
Query: 205 FREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLS 264
F M + G+ P + FV VL+ACSH GL+D G F+ MT + I P+IEH+ C+VDLL
Sbjct: 1384 FSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLG 1443
Query: 265 RVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVL 324
R G+ +EAY FI M + P+ + G+LLSAC+++ + +G A +L SG YVL
Sbjct: 1444 RAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVL 1503
Query: 325 LSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKK 384
LSN YA +G+W++ +R+ MK G++K PG S+ E++N +H F+ GD HPQ +QIY++
Sbjct: 1504 LSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEE 1563
Query: 385 MQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKN 444
+ L +K GY P T+ LHD+E+ +KE LA+HSE+LAI + +++T P + IR+ KN
Sbjct: 1564 LDVLVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKN 1623
Query: 445 LRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
LRVC DCH KLI+ I R+I +RD NRFHHF NG CSCGDYW
Sbjct: 1624 LRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 1667
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 175/389 (44%), Gaps = 75/389 (19%)
Query: 3 REIHGQV-LKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
+++H ++ + L SN S +KL+ Y CGE +FDE+P+
Sbjct: 1044 KKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPK--------------- 1088
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K+ V + MI V N + AL +F+ M + P+ T C
Sbjct: 1089 -----------------KNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPC 1131
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL A S L +G IH+ + + +DLN VG LI+MY +CG + +A +V +ZM RD
Sbjct: 1132 VLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRD 1191
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF--EI 239
V ++NSL+AG A +G+ +A+E+ +EM G++P T +L A ++ L ++ F E+
Sbjct: 1192 VVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEM 1251
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACK 296
F + + + ++ + P EA D M+ + PD I + S+L AC
Sbjct: 1252 FMKLANK-----SLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACG 1306
Query: 297 IHGKLQLGEQI-------------------------------AKRLLD-CRSADSGTYVL 324
L LG +I A+ + D + D ++
Sbjct: 1307 DLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTS 1366
Query: 325 LSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
+ +AY +GK ++AV + ++M++ G+ +
Sbjct: 1367 MISAYGMNGKGRDAVSLFSRMQDLGLNPD 1395
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/489 (42%), Positives = 295/489 (60%), Gaps = 33/489 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+++H +KLG+ N L+ +Y C +
Sbjct: 153 EGKQLHCLAVKLGVGDNMYVCPTLINMYTACND--------------------------- 185
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V+ A VF ++ V + A+I RN AL LFRE+Q ++P +VT++
Sbjct: 186 -----VDAARRVFDKIGEPCVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTML 240
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
LS+C+ LGAL+LGRWIH Y+ K+ D V ALI+MY++CG +D A+ VF++M R
Sbjct: 241 VALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRR 300
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++++I A HG +A+ M REM ++P ++TF+G+L ACSH GLV+ G+E F
Sbjct: 301 DTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYF 360
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SMT +YGI P I+HYGC++DLL R GR EEA FI + I P I+ +LLS+C HG
Sbjct: 361 HSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGN 420
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+++ + + +R+ + + G YV+LSN A +G+W + +R M + G K PGCSSIE
Sbjct: 421 VEMAKLVIQRIFELDDSHGGDYVILSNLCARNGRWDDVNHLRKMMVDKGALKVPGCSSIE 480
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH-DIEDWEKEWALAI 419
VNN +HEF GD H ++ + EL + +KL GY P T +V + DIED EKE L
Sbjct: 481 VNNVVHEFFSGDGVHSTSTILHHALDELVKELKLAGYVPDTSLVFYADIEDEEKEIVLRY 540
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI YGL++T P TTIRVVKNLRVC DCH+ K I+ I R+II+RD RFHHF++
Sbjct: 541 HSEKLAITYGLLNTPPGTTIRVVKNLRVCVDCHNAAKFISLIFGRQIILRDVQRFHHFKD 600
Query: 480 GTCSCGDYW 488
G CSCGDYW
Sbjct: 601 GKCSCGDYW 609
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 156/335 (46%), Gaps = 41/335 (12%)
Query: 24 LVELYGKCGEFKD--AMQLFDEMPECNDVVASTVMINCYVEHGLV---ENAFEVFSRVKV 78
++ L KC ++ +Q + N+ T +IN + + ++A +F ++
Sbjct: 38 ILSLIPKCTSLRELKQIQAYTIKTHQNNPTVLTKLINFCTSNPTIASMDHAHRMFDKIPQ 97
Query: 79 KDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWI 138
D V + M G R + RA+ L ++ + P++ T +L AC++L ALE G+ +
Sbjct: 98 PDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLKALEEGKQL 157
Query: 139 HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRS 198
H K + N V LINMY+ C D+D A +VF+++ E V YN++I A + R
Sbjct: 158 HCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAIITSCARNSRP 217
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGC 258
EA+ +FRE+ G++PT VT + L++C+ G +DLG I + + ++ G + ++
Sbjct: 218 NEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKN-GFDQYVKVNTA 276
Query: 259 IVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSAD 318
++D+ ++ G ++A +M D
Sbjct: 277 LIDMYAKCGSLDDAVSVFKDMP-----------------------------------RRD 301
Query: 319 SGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
+ + + AYA+ G +A+ + +MK+A VQ +
Sbjct: 302 TQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPD 336
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/493 (43%), Positives = 310/493 (62%), Gaps = 10/493 (2%)
Query: 4 EIHG---QVLKLGLRSNRSTRLKLVELYGK-----CGEFKDAMQLFDEMPECNDVVASTV 55
E HG ++LK + +R T L ++ + CG+ A + D + +DV
Sbjct: 330 EAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGL--VSDVRFGNA 387
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+IN Y + G +++A +VF R+ +D V WTA++ G G++ + F++M + V N
Sbjct: 388 LINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEAN 447
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
++T +CVL ACS AL+ G+ IH+ + K I + V AL++MY +CG ++ A++V E
Sbjct: 448 KITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSE 507
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
M RDV T+N+LI GLA +GR +EA++ F M ++ +RP TFV V++AC LV+
Sbjct: 508 GMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEE 567
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G F SM +DYGI P +HY C+VD+L+R G EA D I M P M G+LL+AC
Sbjct: 568 GRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAAC 627
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
+ HG +++GEQ A++ L ++GTYV LS YA++G W++ ++R MKE GV+KEPG
Sbjct: 628 RAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPG 687
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
S IEV E+H F+ GD HP+ E+IY +++ L + +K GY P T V+HD++ KE
Sbjct: 688 RSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQIKSLGYVPDTRFVMHDLDQEGKER 747
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
A+ HSE+LAI YGLIST P T IRV KNLRVC DCH+ K I+ IT R+II RD +RFH
Sbjct: 748 AVCHHSEKLAIAYGLISTPPETPIRVSKNLRVCTDCHTATKFISKITGREIIARDAHRFH 807
Query: 476 HFENGTCSCGDYW 488
HF+NG CSCGDYW
Sbjct: 808 HFKNGECSCGDYW 820
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 151/275 (54%), Gaps = 4/275 (1%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPEC---NDVVASTVMI 57
E + + +L+ G+R +R T + ++ G + Q+ ++ E +DV ST +
Sbjct: 229 ESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALT 288
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
Y++ G V++A EVF + +D + W MI GLV +G++ A +F M ++ V P+ V
Sbjct: 289 KMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRV 348
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T + +LSAC++ G L G+ IH+ K + + G ALINMYS+ G + A QVF+ M
Sbjct: 349 TYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRM 408
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
+RDV ++ +L+ G A G+ +E+ F++M+ QG+ K+T++ VL ACS+ + G
Sbjct: 409 PKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGK 468
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
EI + + GI + ++ + + G E+A
Sbjct: 469 EIHAEVVKA-GIFADLAVANALMSMYFKCGSVEDA 502
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 178/383 (46%), Gaps = 66/383 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H +L+ G++ N L++LY CG +A +L
Sbjct: 63 GKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRL--------------------- 101
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
F+ FS K V W MI G G A +LF MQ++ + P++ T V
Sbjct: 102 --------FDKFSN---KSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVS 150
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+LSACS AL GR +H + + + N VG ALI+MY++CG + A +VF+ M RD
Sbjct: 151 ILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRD 210
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF- 240
++ +L A G + E+++ + M+ +G+RP+++T++ VL+AC ++ G +I
Sbjct: 211 EVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHA 270
Query: 241 --------------QSMTRDY----GIEPQIEHYGCI-----------VDLLSRVGRPEE 271
++T+ Y ++ E + C+ + L G+ EE
Sbjct: 271 QIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEE 330
Query: 272 AYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQI-AKRLLDCRSADSGTYVLLSN 327
A+ M +APD + ++LSAC G L G++I A+ + D +D L N
Sbjct: 331 AHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALIN 390
Query: 328 AYASSGKWKEAVQIRAKMKEAGV 350
Y+ +G K+A Q+ +M + V
Sbjct: 391 MYSKAGSMKDARQVFDRMPKRDV 413
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 168/352 (47%), Gaps = 39/352 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GRE+H +V++ GL +N + L+ +Y KCG +DA ++FD M ++V
Sbjct: 164 GREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEV----------- 212
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
WT + +G +L + M ++ VRP+ +T +
Sbjct: 213 ---------------------SWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMN 251
Query: 122 VLSACSQLGALELGRWIHSYM--GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
VLSAC L ALE G+ IH+ + +H D+ V AL MY +CG + A +VFE +
Sbjct: 252 VLSACGSLAALEKGKQIHAQIVESEHHSDVR--VSTALTKMYIKCGAVKDAREVFECLPN 309
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
RDV +N++I GL G+ EA MF M+ + + P +VT++ +L+AC+ G + G EI
Sbjct: 310 RDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEI 369
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+D G+ + ++++ S+ G ++A M D + +L+ G
Sbjct: 370 HARAVKD-GLVSDVRFGNALINMYSKAGSMKDARQVFDRMP-KRDVVSWTALVGGYADCG 427
Query: 300 KLQLGEQIAKRLL-DCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
++ K++L A+ TY+ + A ++ K +I A++ +AG+
Sbjct: 428 QVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGI 479
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 119/275 (43%), Gaps = 36/275 (13%)
Query: 102 DLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMY 161
D+ + + + + + V +L +C + L +G+ +H ++ + + N + L+ +Y
Sbjct: 30 DVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLY 89
Query: 162 SRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFV 221
CG +++A ++F++ + V ++N +I+G A G EA +F M +G+ P K TFV
Sbjct: 90 VHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFV 149
Query: 222 GVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA--------- 272
+L+ACS ++ G E+ + + G+ ++ + ++ G +A
Sbjct: 150 SILSACSSPAALNWGREVHVRVM-EAGLANNATVGNALISMYAKCGSVRDARRVFDAMAS 208
Query: 273 -------------------------YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQI 307
Y + + P I ++LSAC L+ G+QI
Sbjct: 209 RDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQI 268
Query: 308 AKRLLDCR-SADSGTYVLLSNAYASSGKWKEAVQI 341
++++ +D L+ Y G K+A ++
Sbjct: 269 HAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREV 303
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 34/197 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIH +V+K G+ ++ + L+ +Y KCG +DA+++ + M
Sbjct: 467 GKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGM----------------- 509
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+D V W +I GL +NG AL F M+ + +RPN T V
Sbjct: 510 ---------------STRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVN 554
Query: 122 VLSACSQLGALELGRWIHSYMGK-HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
V+SAC +E GR + M K + I ++++ +R G + +A V M +
Sbjct: 555 VMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFK 614
Query: 180 RDVTTYNSLIAGLAMHG 196
+ +L+A HG
Sbjct: 615 PSAAMWGALLAACRAHG 631
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/453 (45%), Positives = 285/453 (62%), Gaps = 1/453 (0%)
Query: 36 DAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNG 95
+A +LF+ MP C +V + M+ Y + G++E A VF + KD V W AM+ + G
Sbjct: 304 EAKELFNMMP-CRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGG 362
Query: 96 EMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGG 155
L LF EM R N CVLS C+ + ALE G +H + + + VG
Sbjct: 363 CSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGN 422
Query: 156 ALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRP 215
AL+ MY +CG+++ A FEEM+ERDV ++N++IAG A HG EA+E+F M +P
Sbjct: 423 ALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKP 482
Query: 216 TKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDF 275
+T VGVL ACSH GLV+ G F SM D+G+ + EHY C++DLL R GR EA+D
Sbjct: 483 DDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDL 542
Query: 276 ITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKW 335
+ +M PD M G+LL A +IH +LG A+++ + ++G YVLLSN YASSGKW
Sbjct: 543 MKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKW 602
Query: 336 KEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLE 395
++A ++R M+E GV+K PG S IEV N++H F GD HP++E+IY +++L +K
Sbjct: 603 RDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKA 662
Query: 396 GYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMI 455
GY +T++VLHD+E+ EKE L HSE+LA+ YG+++ P IRV+KNLRVC DCH+
Sbjct: 663 GYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAF 722
Query: 456 KLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
K I+ I R I++RD NRFHHF G+CSCGDYW
Sbjct: 723 KYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 141/315 (44%), Gaps = 44/315 (13%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
L+ Y + G+ +A +LFD MP DVV+ +M++ Y G + A +F V+D
Sbjct: 199 LMSGYVQWGKMSEARELFDRMP-GRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFT 257
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
WTA++ G +NG + A +F M N V+ +++A Q ++ + + + M
Sbjct: 258 WTAVVSGYAQNGMLEEARRVFDAMPERNA----VSWNAMVAAYIQRRMMDEAKELFNMMP 313
Query: 144 -KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAV 202
++ N ++ G Y++ G +++A VF+ M ++D ++ +++A + G S E +
Sbjct: 314 CRNVASWNTMLTG-----YAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETL 368
Query: 203 EMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR-DYGI------------ 249
++F EM G + F VL+ C+ ++ G ++ + R YG+
Sbjct: 369 QLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMY 428
Query: 250 -----------------EPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLG 289
E + + ++ +R G +EA +D + PD I L
Sbjct: 429 FKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLV 488
Query: 290 SLLSACKIHGKLQLG 304
+L+AC G ++ G
Sbjct: 489 GVLAACSHSGLVEKG 503
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 15/211 (7%)
Query: 34 FKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVR 93
DA LFDEMP D V VMI+ + HGLV A F KD V W M+ VR
Sbjct: 116 LADARGLFDEMP-VRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVR 174
Query: 94 NGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM-GKHRIDLNHI 152
NG + A LF + ++ ++S Q G + R + M G+ + N +
Sbjct: 175 NGRVEEARGLF----NSRTEWDAISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIM 230
Query: 153 VGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG 212
V G Y+R GD+ +A ++F+ RDV T+ ++++G A +G EA +F M +
Sbjct: 231 VSG-----YARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER- 284
Query: 213 IRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
V++ ++ A ++D E+F M
Sbjct: 285 ---NAVSWNAMVAAYIQRRMMDEAKELFNMM 312
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 34/196 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++HG++++ G L+ +Y KCG +DA F+EM E DVV+ MI Y
Sbjct: 402 GMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEE-RDVVSWNTMIAGYA 460
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG + A E+F ++ T +P+++T+V
Sbjct: 461 RHGFGKEALEIFDMMRTTST-------------------------------KPDDITLVG 489
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VL+ACS G +E G + +S + +I++ R G + +A + ++M E
Sbjct: 490 VLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFE 549
Query: 180 RDVTTYNSLIAGLAMH 195
D T + +L+ +H
Sbjct: 550 PDSTMWGALLGASRIH 565
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 116/302 (38%), Gaps = 58/302 (19%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
+V+ S I ++ G V +A +F+ + + T + AM+ G NG + A LFR +
Sbjct: 37 EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP 96
Query: 109 R-DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
R DN N T++ L+ S L
Sbjct: 97 RPDNYSYN--TLLHALAVSSSLA------------------------------------- 117
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A +F+EM RD TYN +I+ A HG V + R + V++ G+L A
Sbjct: 118 -DARGLFDEMPVRDSVTYNVMISSHANHG----LVSLARHYFDLAPEKDAVSWNGMLAAY 172
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
G V+ +F S T I G + ++ E +D + + +IM
Sbjct: 173 VRNGRVEEARGLFNSRTEWDAISWNALMSGYV--QWGKMSEARELFDRMPGRDVVSWNIM 230
Query: 288 LGSLLSACKIHGKLQLGEQI-AKRLLDCRSA-DSGTYVLLSNAYASSGKWKEAVQIRAKM 345
+ G + G+ + A+RL D D T+ + + YA +G +EA ++ M
Sbjct: 231 ---------VSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAM 281
Query: 346 KE 347
E
Sbjct: 282 PE 283
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 34/222 (15%)
Query: 146 RIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMF 205
R++ I I + R G + A ++F M R +TYN+++AG + +GR A +F
Sbjct: 33 RLEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF 92
Query: 206 REMINQGIRPTKVTFVGVLNACSHG-------GLVD-------LGFEIFQSMTRDYGIEP 251
R + RP ++ +L+A + GL D + + + S ++G+
Sbjct: 93 RAI----PRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVS 148
Query: 252 QIEHYGCIV---DLLS---------RVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
HY + D +S R GR EEA N + D I +L+S G
Sbjct: 149 LARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF-NSRTEWDAISWNALMSGYVQWG 207
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQI 341
K+ ++ R+ D ++ ++ + YA G EA ++
Sbjct: 208 KMSEARELFDRM---PGRDVVSWNIMVSGYARRGDMVEARRL 246
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/519 (41%), Positives = 319/519 (61%), Gaps = 32/519 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN------------- 48
G ++H Q L GL ++ L+ +YG+CG A ++FDEMPE N
Sbjct: 125 GIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCR 184
Query: 49 -----------------DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGL 91
++++ VM+ Y + G +E A E+F + +KD V W+ MI G
Sbjct: 185 GGDMKGGRELFDLMPVRNLMSWNVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGF 244
Query: 92 VRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH 151
NG A FRE+QR +RPNE ++ VLSAC+Q GALE G+ +H ++ K +
Sbjct: 245 AHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIV 304
Query: 152 IVGGALINMYSRCGDIDKALQVFEE-MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
V AL++ YS+CG++ A VFE M ER++ ++ S++A LAMHG EA+ +F +M
Sbjct: 305 SVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEE 364
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
GIRP ++ F+ +L ACSH GLV+ G E F M Y IEP IEHYGC+VDL R G+ +
Sbjct: 365 SGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQ 424
Query: 271 EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYA 330
+AY+F+ M I I+ +LL AC +HG ++L EQ+ +RL + +S +VLLSNAYA
Sbjct: 425 KAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKERLSELDPNNSSDHVLLSNAYA 484
Query: 331 SSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQ 390
+GKWK+A +R M E + K PG S IEV+ ++ F+ G ++ E+ YKK++E+ +
Sbjct: 485 VAGKWKDAASVRRSMTEQRITKTPGWSMIEVDKIMYTFLAGTKQYKITEEAYKKLKEIIR 544
Query: 391 IVKLE-GYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCN 449
+++E GY P VLHDIE+ EKE ++++HSE+LA+ +G+ TIR+VKNLR+C
Sbjct: 545 RLRVEGGYVPEIGRVLHDIEEEEKEGSVSVHSEKLAVAFGIARLCKGRTIRIVKNLRICR 604
Query: 450 DCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
DCH+++KLI+ I K +I+VRDR+RFH F++G CSC DYW
Sbjct: 605 DCHAVMKLISQIYKVEIVVRDRSRFHSFKDGYCSCRDYW 643
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 153/388 (39%), Gaps = 76/388 (19%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
++IH VLKLGL S+ KL+ C A+ L D +
Sbjct: 22 KQIHANVLKLGLESDPFIAGKLLH---HC-----AISLSDSL------------------ 55
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP-NEVTIVC 121
+ A +F D +I GL + +L F EM+R++ P + +
Sbjct: 56 ----DYACRLFRYTPNPDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAF 111
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
++ A + L ++ +G +H H +D + VG LI+MY CG + A +VF+EM E +
Sbjct: 112 IVKAAANLRSVRVGIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPN 171
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+N+++ G E+F M + + V G A G ++L E+F
Sbjct: 172 AIAWNAMVTACCRGGDMKGGRELFDLMPVRNLMSWNVMLAGYTKA----GELELAREMFL 227
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIH 298
M + + ++ + G EEA+ F ++ + P+ L +LSAC
Sbjct: 228 EMPMKDDVS-----WSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQA 282
Query: 299 GKLQLGE---------------QIAKRLLDCRSA------------------DSGTYVLL 325
G L+ G+ + LLD S + ++ +
Sbjct: 283 GALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSM 342
Query: 326 SNAYASSGKWKEAVQIRAKMKEAGVQKE 353
A A G +EA+ I KM+E+G++ +
Sbjct: 343 MAALAMHGHGEEAIGIFHKMEESGIRPD 370
>gi|125557337|gb|EAZ02873.1| hypothetical protein OsI_25005 [Oryza sativa Indica Group]
Length = 651
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/487 (41%), Positives = 296/487 (60%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H +K G + R LV YG G+ ++FDE+P DV+ ++ YV
Sbjct: 165 GSHVHALAVKAGAAGDLFVRNALVHFYGVSGDVGAMRRVFDELPRVRDVLTWNEVLAGYV 224
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G++ A EVF + V+D + W+ ++ G V+ E+ AL +FR M VRPN+ +V
Sbjct: 225 RAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGVRPNQAAVVT 284
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
LSA ++LG LE G+++H+ + + + + VG AL++MY++CG + A +VF+ M+ RD
Sbjct: 285 ALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKCGCVAVAREVFDGMRRRD 344
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +N++I GLA HG +AVE+F I++G+ PT VTFVGVLN CS GLV G F+
Sbjct: 345 VFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFK 404
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+ Y IEP++EHYGC+VDLL R G EA + I M IAPD ++ G++LS+CK HG +
Sbjct: 405 LIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPVLWGTILSSCKTHGLV 464
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
LG + +L++ SG YVLLS YA + KW E ++R M G K G S +E
Sbjct: 465 DLGVSVGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREVRKLMSSRGTNKSAGWSLMEA 524
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ ++H+F++GD H QIY + + + + GY P VLHDI + EK A+ +HS
Sbjct: 525 HGKVHKFLVGDTYHKDSVQIYDTLDMINKRLTEAGYVPDVSSVLHDIGEEEKVHAVKVHS 584
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ERLAI YG I + + IR+VKNLRVC DCH K++ + +R+IIVRD +RFHH + G
Sbjct: 585 ERLAIAYGFIVLEAGSPIRIVKNLRVCGDCHEFSKMVTMVFQREIIVRDGSRFHHMKEGK 644
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 645 CSCLDYW 651
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 112/278 (40%), Gaps = 54/278 (19%)
Query: 101 LDLFREMQRDNVRPNEVTIVCV------------LSACSQLGALELGRWIHSYMGKHRID 148
L LF +R N P+ T + SACS LG+ +H+ K
Sbjct: 126 LTLFSRFRRRN--PHSFTFLLASISNHLNAAGPSASACSFLGS-----HVHALAVKAGAA 178
Query: 149 LNHIVGGALINMYSRCGDIDKALQVFEEMKE-RDVTTYNSLIAGLAMHGRSIEAVE---- 203
+ V AL++ Y GD+ +VF+E+ RDV T+N ++AG G A E
Sbjct: 179 GDLFVRNALVHFYGVSGDVGAMRRVFDELPRVRDVLTWNEVLAGYVRAGMMTVAREVFDE 238
Query: 204 ---------------------------MFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
+FR M+ QG+RP + V L+A + GL++ G
Sbjct: 239 MPVRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGVRPNQAAVVTALSAAARLGLLEHG 298
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
+ ++ + G+ + +VD+ ++ G A + M+ D +++
Sbjct: 299 -KFVHNVVQRSGMPVCMNVGAALVDMYAKCGCVAVAREVFDGMR-RRDVFAWNAMICGLA 356
Query: 297 IHGKLQLGEQIAKRLL-DCRSADSGTYVLLSNAYASSG 333
HG + ++ +R + + S + T+V + N + SG
Sbjct: 357 AHGLGRDAVELFERFISEGLSPTNVTFVGVLNGCSRSG 394
>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/489 (43%), Positives = 300/489 (61%), Gaps = 34/489 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR+ HG +K+G + L+ +Y +CG+ + A +
Sbjct: 160 EGRQAHGVAVKVGAAEHEYVLPTLINMYAECGDARAARTM-------------------- 199
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
F RV + V + AMI VR+ AL LFREMQ ++ VT++
Sbjct: 200 ------------FGRVDGECVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKLTSVTLI 247
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSAC+ LGALELGRWIH Y+ K ++D V ALI+MY +CG ++ A+ VF+ M+ R
Sbjct: 248 SVLSACALLGALELGRWIHEYVRKVQLDSLVKVNTALIDMYGKCGSLEDAISVFQGMESR 307
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++ +I A H EA+ +F EM QGI+P VTF+GVL ACSH GLV G + F
Sbjct: 308 DRQAWSVMIVAYANHSYGREAISLFEEMKKQGIKPDDVTFLGVLYACSHSGLVSEGLQYF 367
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM R++G+ P I+HYGC+ DLL+R G+ + AY+FI + I P I+ +LLSAC G
Sbjct: 368 DSM-REFGLVPGIKHYGCVADLLARSGQLDRAYEFIDELPIKPTAILWRTLLSACGSRGD 426
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
LG+Q+ +R+L+ + G YV+ SN A++G+W+E ++R M E GV K PGCSSIE
Sbjct: 427 ADLGKQVFERILELDDSHGGDYVIFSNLCANTGRWEEMNRVRKLMNEKGVVKVPGCSSIE 486
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH-DIEDWEKEWALAI 419
V+N +HEF GD RHP+ + + + + +KL GY P+T V H ++ + EK +L
Sbjct: 487 VDNRVHEFFAGDGRHPKSLDARRMVDGVIEQLKLAGYVPNTSHVFHVEMGEEEKAVSLRY 546
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GL++T P TT+RVVKNLRVC DCHSM KL++ + R+II+RD NRFHHFE+
Sbjct: 547 HSEKLAISFGLLNTSPGTTLRVVKNLRVCPDCHSMAKLVSMVFNRRIILRDLNRFHHFED 606
Query: 480 GTCSCGDYW 488
G CSCGDYW
Sbjct: 607 GVCSCGDYW 615
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 154/356 (43%), Gaps = 38/356 (10%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVEL-----YGKCGEFKDAMQLFDEMPECNDVVASTVMIN 58
++H +K GL+++ + +L+ L K + A Q+FD +P DVV ++
Sbjct: 49 QLHAAAVKSGLQAHPAFVTRLLTLCTDQGAAKPAQLSYARQVFDRIPGPGDVVWYNTLLR 108
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVT 118
Y C A G R A +F M + V P+ T
Sbjct: 109 GYAR--------------------CSAA---GGARP-PAEEAARVFVRMLEEGVAPDTYT 144
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
V +L AC+ A E GR H K + V LINMY+ CGD A +F +
Sbjct: 145 FVSLLKACAAARAGEEGRQAHGVAVKVGAAEHEYVLPTLINMYAECGDARAARTMFGRVD 204
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
V +YN++I R EA+ +FREM +G++ T VT + VL+AC+ G ++LG
Sbjct: 205 GECVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKLTSVTLISVLSACALLGALELGRW 264
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
I + R ++ ++ ++D+ + G E+A M+ + D ++ A H
Sbjct: 265 IHE-YVRKVQLDSLVKVNTALIDMYGKCGSLEDAISVFQGME-SRDRQAWSVMIVAYANH 322
Query: 299 G----KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
+ L E++ K+ + D T++ + A + SG E +Q M+E G+
Sbjct: 323 SYGREAISLFEEMKKQGI---KPDDVTFLGVLYACSHSGLVSEGLQYFDSMREFGL 375
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/493 (41%), Positives = 318/493 (64%), Gaps = 5/493 (1%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQL---FDEMPECNDVVASTVMI 57
E E+ +++K+ +R + ST + ++ G + Q+ D+ +++ +I
Sbjct: 179 EALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALI 238
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y + G VE A +F + KD + W +I G AL LF+EM R PN+V
Sbjct: 239 DLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDV 298
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHI--VGGALINMYSRCGDIDKALQVFE 175
T++ VL AC+ LGA+++GRWIH Y+ K + + + +LI+MY++CGDI+ A QVF
Sbjct: 299 TMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFN 358
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
M + ++++N++I G AMHGR+ + ++F M GI P +TFVG+L+ACSH G++DL
Sbjct: 359 SMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDL 418
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G IF+SMT+DY + P++EHYGC++DLL G +EA + I M++ PD ++ SLL AC
Sbjct: 419 GRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKAC 478
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
K+HG ++L E A+ L+ + +Y+LLSN YAS+G+W++ +IRA + ++K PG
Sbjct: 479 KMHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPG 538
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
CSSIEV++ + EF++GD HPQ +IY ++E++ +++ G+ P T VL ++E+ KE
Sbjct: 539 CSSIEVDSVVFEFVVGDKFHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEG 598
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
AL HSE+LAI +GLISTKP T + +VKNLRVC +CH KL++ I KR+I+ RDR RFH
Sbjct: 599 ALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLLSKIYKREIVARDRTRFH 658
Query: 476 HFENGTCSCGDYW 488
HF +G CSC DYW
Sbjct: 659 HFRDGVCSCNDYW 671
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/351 (33%), Positives = 179/351 (50%), Gaps = 46/351 (13%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG++IHGQVLKLG + L+ +Y + +DA ++FD DVV+ T +I Y
Sbjct: 82 EGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSH-RDVVSYTALITGY 140
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G + +A ++F + VKD V W AMI G G AL+LF EM + NVRP+E T V
Sbjct: 141 ASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYV 200
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSAC+ G++ELGR +HS++ H D N + ALI++YS+CG+++ A +F+ + +
Sbjct: 201 TVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYK 260
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG---- 236
DV ++N+LI G EA+ +F+EM+ G P VT + VL AC+H G +D+G
Sbjct: 261 DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIH 320
Query: 237 ---------------------------------FEIFQSMTRDYGIEPQIEHYGCIVDLL 263
++F SM + + + ++
Sbjct: 321 VYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM-----LHKSLSSWNAMIFGF 375
Query: 264 SRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
+ GR + ++D + M+ I PD I LLSAC G L LG I + +
Sbjct: 376 AMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 426
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 146/346 (42%), Gaps = 71/346 (20%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A VF ++ + + W MI G + + +L L+ M + PN T +L +C++
Sbjct: 17 ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
G+ IH + K DL+ V +LI+MY + ++ A +VF+ RDV +Y +L
Sbjct: 77 SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTAL 136
Query: 189 IAGLAMHG--RSI-----------------------------EAVEMFREMINQGIRPTK 217
I G A G RS EA+E+F EM+ +RP +
Sbjct: 137 ITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDE 196
Query: 218 VTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFI- 276
T+V VL+AC+H G ++LG ++ S D+G + ++ ++DL S+ G E A
Sbjct: 197 STYVTVLSACAHSGSIELGRQV-HSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQ 255
Query: 277 -----------------TNMKI----------------APDHIMLGSLLSACKIHGKLQL 303
T+M + P+ + + S+L AC G + +
Sbjct: 256 GLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDI 315
Query: 304 GE----QIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
G I KRL +A S L+ + YA G + A Q+ M
Sbjct: 316 GRWIHVYIDKRLKGVTNASSLRTSLI-DMYAKCGDIEAAHQVFNSM 360
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/453 (45%), Positives = 285/453 (62%), Gaps = 1/453 (0%)
Query: 36 DAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNG 95
+A +LF+ MP C +V + M+ Y + G++E A VF + KD V W AM+ + G
Sbjct: 304 EAKELFNMMP-CRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGG 362
Query: 96 EMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGG 155
L LF EM R N CVLS C+ + ALE G +H + + + VG
Sbjct: 363 CSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGN 422
Query: 156 ALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRP 215
AL+ MY +CG+++ A FEEM+ERDV ++N++IAG A HG EA+E+F M +P
Sbjct: 423 ALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKP 482
Query: 216 TKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDF 275
+T VGVL ACSH GLV+ G F SM D+G+ + EHY C++DLL R GR EA+D
Sbjct: 483 DDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDL 542
Query: 276 ITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKW 335
+ +M PD M G+LL A +IH +LG A+++ + ++G YVLLSN YASSGKW
Sbjct: 543 MKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKW 602
Query: 336 KEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLE 395
++A ++R M+E GV+K PG S IEV N++H F GD HP++E+IY +++L +K
Sbjct: 603 RDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKA 662
Query: 396 GYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMI 455
GY +T++VLHD+E+ EKE L HSE+LA+ YG+++ P IRV+KNLRVC DCH+
Sbjct: 663 GYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAF 722
Query: 456 KLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
K I+ I R I++RD NRFHHF G+CSCGDYW
Sbjct: 723 KYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 143/341 (41%), Gaps = 65/341 (19%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
++ Y + G ++A LF+ E DV++ +++ YV+ G + A E+F R+ +D V
Sbjct: 168 MLAAYVRNGRVEEARGLFNSRTEW-DVISWNALMSGYVQWGKMSEARELFDRMPGRDVVS 226
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W M+ G R G+M A LF +V T V+S +Q G LE R + M
Sbjct: 227 WNIMVSGYARRGDMVEARRLFDAAPVRDV----FTWTAVVSGYAQNGMLEEARRVFDAMP 282
Query: 144 -KHRIDLNHIVGG-----------ALINM---------------YSRCGDIDKALQVFEE 176
++ + N +V L NM Y++ G +++A VF+
Sbjct: 283 ERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDT 342
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
M ++D ++ +++A + G S E +++F EM G + F VL+ C+ ++ G
Sbjct: 343 MPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECG 402
Query: 237 FEIFQSMTR-DYGI-----------------------------EPQIEHYGCIVDLLSRV 266
++ + R YG+ E + + ++ +R
Sbjct: 403 MQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARH 462
Query: 267 GRPEEA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLG 304
G +EA +D + PD I L +L+AC G ++ G
Sbjct: 463 GFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKG 503
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 99/211 (46%), Gaps = 15/211 (7%)
Query: 34 FKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVR 93
DA LFDEMP D V VMI+ + HGLV A F KD V W M+ VR
Sbjct: 116 LADARGLFDEMP-VRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVR 174
Query: 94 NGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM-GKHRIDLNHI 152
NG + A LF +V ++ ++S Q G + R + M G+ + N +
Sbjct: 175 NGRVEEARGLFNSRTEWDV----ISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIM 230
Query: 153 VGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG 212
V G Y+R GD+ +A ++F+ RDV T+ ++++G A +G EA +F M +
Sbjct: 231 VSG-----YARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER- 284
Query: 213 IRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
V++ ++ A ++D E+F M
Sbjct: 285 ---NAVSWNAMVAAYIQRRMMDEAKELFNMM 312
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 34/196 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++HG++++ G L+ +Y KCG +DA F+EM E DVV+ MI Y
Sbjct: 402 GMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEE-RDVVSWNTMIAGYA 460
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG + A E+F ++ T +P+++T+V
Sbjct: 461 RHGFGKEALEIFDMMRTTST-------------------------------KPDDITLVG 489
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VL+ACS G +E G + +S + +I++ R G + +A + ++M E
Sbjct: 490 VLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFE 549
Query: 180 RDVTTYNSLIAGLAMH 195
D T + +L+ +H
Sbjct: 550 PDSTMWGALLGASRIH 565
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 120/305 (39%), Gaps = 64/305 (20%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
+V+ S I ++ G V +A +F+ + + T + AM+ G NG + A LFR +
Sbjct: 37 EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP 96
Query: 109 R-DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
R DN N T++ L+ S L
Sbjct: 97 RPDNYSYN--TLLHALAVSSSLA------------------------------------- 117
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A +F+EM RD TYN +I+ A HG V + R + V++ G+L A
Sbjct: 118 -DARGLFDEMPVRDSVTYNVMISSHANHG----LVSLARHYFDLAPEKDAVSWNGMLAAY 172
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPD 284
G V+ +F S T E + + ++ + G+ EA +D + +
Sbjct: 173 VRNGRVEEARGLFNSRT-----EWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSW 227
Query: 285 HIMLGSLLSACKIHGKLQLGEQI-AKRLLDCRSA-DSGTYVLLSNAYASSGKWKEAVQIR 342
+IM + G + G+ + A+RL D D T+ + + YA +G +EA ++
Sbjct: 228 NIM---------VSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVF 278
Query: 343 AKMKE 347
M E
Sbjct: 279 DAMPE 283
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 34/222 (15%)
Query: 146 RIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMF 205
R++ I I + R G + A ++F M R +TYN+++AG + +GR A +F
Sbjct: 33 RLEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF 92
Query: 206 REMINQGIRPTKVTFVGVLNACSHG-------GLVD-------LGFEIFQSMTRDYGIEP 251
R + RP ++ +L+A + GL D + + + S ++G+
Sbjct: 93 RAI----PRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVS 148
Query: 252 QIEHYGCIV---DLLS---------RVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
HY + D +S R GR EEA N + D I +L+S G
Sbjct: 149 LARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF-NSRTEWDVISWNALMSGYVQWG 207
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQI 341
K+ ++ R+ D ++ ++ + YA G EA ++
Sbjct: 208 KMSEARELFDRM---PGRDVVSWNIMVSGYARRGDMVEARRL 246
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/491 (40%), Positives = 307/491 (62%), Gaps = 5/491 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLK----LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMI 57
G+ +HGQ+ +L L LV LY KCG A ++FD M + DVV+ ++
Sbjct: 313 GKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNM-KSKDVVSWNTIL 371
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ YVE ++ A EVF + K+ + W M+ G V G AL LF M+ ++V+P +
Sbjct: 372 SGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDY 431
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T +SAC +LG+L+ G+ +H ++ + + ++ G ALI MY+RCG + +A +F M
Sbjct: 432 TYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVM 491
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
D ++N++I+ L HG EA+E+F M+ +GI P +++F+ VL AC+H GLVD GF
Sbjct: 492 PNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGF 551
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
+ F+SM RD+GI P +HY ++DLL R GR EA D I M P + ++LS C+
Sbjct: 552 QYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRT 611
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
G ++LG A +L GTY+LLSN Y+++G+W +A ++R M++ GV+KEPGCS
Sbjct: 612 SGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCS 671
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IE N++H F++GD +HP+ ++YK ++ + ++ GY P T+VVLHD+E +KE L
Sbjct: 672 WIEAGNKVHVFVVGDTKHPEAHKVYKFLEMVGARMRKLGYVPDTKVVLHDMEPHQKEHIL 731
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSERLA+ +GL+ P T+ V+KNLR+C+DCH+++ ++ R+I+VRD RFHHF
Sbjct: 732 FAHSERLAVGFGLLKLPPGATVTVLKNLRICDDCHAVMMFMSKAVGREIVVRDVRRFHHF 791
Query: 478 ENGTCSCGDYW 488
++G CSCG+YW
Sbjct: 792 KDGECSCGNYW 802
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 165/376 (43%), Gaps = 76/376 (20%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEF---KDAMQLFDEMPECNDVVASTVMINCY 60
++ VLK G S LV LY KC +DA ++ DEMP+ D + T M+ Y
Sbjct: 180 QLQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPD-KDALTWTTMVVGY 238
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V G V A VF V VK V W AMI G V +G + A +LFR M + V +E T
Sbjct: 239 VRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFT 298
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHI------VGGALINMYSRCGDIDKALQVF 174
VLSAC+ G G+ +H + R+ N + V AL+ +YS+CG+I A ++F
Sbjct: 299 SVLSACANAGFFAHGKSVHGQIT--RLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIF 356
Query: 175 EEMKERDVTTYNSLIAGLA------------------------------MHGR-SIEAVE 203
+ MK +DV ++N++++G +HG S +A++
Sbjct: 357 DNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALK 416
Query: 204 MFREMINQGIRPTKVTFVGVLNACS-----------HGGLVDLGFEIFQSMTRD------ 246
+F M + ++P T+ G ++AC HG LV LGFE S
Sbjct: 417 LFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYA 476
Query: 247 -----------YGIEPQIE--HYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGS 290
+ + P I+ + ++ L + G EA + M I PD I +
Sbjct: 477 RCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLT 536
Query: 291 LLSACKIHGKLQLGEQ 306
+L+AC G + G Q
Sbjct: 537 VLTACNHSGLVDEGFQ 552
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 167/377 (44%), Gaps = 57/377 (15%)
Query: 22 LKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKV--K 79
L+L+ LY G+ A LF P C VA+T ++ Y G + A F V +
Sbjct: 63 LRLIHLYTLSGDLPAAATLFRADP-CP--VAATSLVAAYAAAGRLPAAVSFFDAVPQARR 119
Query: 80 DTVCWTAMIDGLVRNGEMARALDLFRE-MQRDNVRPNEVTIVCVLSA-----------CS 127
DTV A+I R A A+ +FR + ++RP++ + +LSA C+
Sbjct: 120 DTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCA 179
Query: 128 QL----------GALELGRWIHS-YMGKHRI--------------DLNHIVGGALINMYS 162
QL G L + + + YM + D + + ++ Y
Sbjct: 180 QLQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYV 239
Query: 163 RCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVG 222
R GD+ A VFEE+ + +N++I+G G +EA E+FR M+ + + + TF
Sbjct: 240 RRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTS 299
Query: 223 VLNACSHGGLVDLGFEIFQSMTR---DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM 279
VL+AC++ G G + +TR ++ E + +V L S+ G A NM
Sbjct: 300 VLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNM 359
Query: 280 K----IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKW 335
K ++ + I+ G + S+C + +++ E++ + + +++++ + Y G
Sbjct: 360 KSKDVVSWNTILSGYVESSC-LDKAVEVFEEMPYK-------NELSWMVMVSGYVHGGFS 411
Query: 336 KEAVQIRAKMKEAGVQK 352
++A+++ +M+ V+
Sbjct: 412 EDALKLFNRMRAEDVKP 428
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/487 (42%), Positives = 298/487 (61%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ IH ++++G SN LV +YG C DA Q+FDE+P+
Sbjct: 161 GKAIHCCIIQMGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPD--------------- 205
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ V W A+I G N + +D+FREMQ +P EVT+V
Sbjct: 206 -----------------RNIVSWNALITGYNHNRMFRKVIDVFREMQIAGAKPVEVTMVG 248
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL AC+ LGAL GRWI Y+ +R+ LN VG ALI+MY++CG +D+A ++F+ M+ ++
Sbjct: 249 VLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRVKN 308
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V T+N LI+G AM+GR A++ F MI + +P +VTF+GVL AC H GLV+ G F
Sbjct: 309 VYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGVLCACCHQGLVNEGRTYFT 368
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM ++G+ P+IEHYGC+VDLL R G +EA I M + PD I+ LL AC+IHG +
Sbjct: 369 SMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQPDPIIWRELLGACRIHGNI 428
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
QLGE K+LL+ + YVLL+N YA +W + ++R M V+K PGCSSIE+
Sbjct: 429 QLGEFAIKKLLELEPNNGENYVLLANLYARDQRWDKVGEVREMMDCRRVRKVPGCSSIEI 488
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+N ++EF++ + P E++YK + ++ + +KL GY T + +DIE+ EKE +L HS
Sbjct: 489 DNVVYEFVVSNYIKPGFEEVYKLLADMNKKLKLAGYVADTGMASYDIEEEEKEHSLMYHS 548
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ +GL+ + T+R+VKNLR+C DCH K+++ + +R I VRDRNRFHHF G
Sbjct: 549 EKLALAFGLLKSPSGLTLRIVKNLRICQDCHGFFKIVSKVYRRDISVRDRNRFHHFVGGA 608
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 609 CSCKDYW 615
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 124/250 (49%), Gaps = 2/250 (0%)
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
HG +A D+ +MI + + ++ ++ +M ++ + P+ T V
Sbjct: 89 HGFAASALLFTQFYGFIDSDLCNSMIRCYTDSNKHLHSVFIYTQMWKNGIFPDSSTFPTV 148
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L + +QL ELG+ IH + + + N V AL+NMY C + A QVF+E+ +R++
Sbjct: 149 LKSVAQLCRQELGKAIHCCIIQMGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNI 208
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
++N+LI G + + +++FREM G +P +VT VGVL AC+H G ++ G I
Sbjct: 209 VSWNALITGYNHNRMFRKVIDVFREMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDY 268
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
+ + + + ++D+ ++ G +EA M++ + L+S ++G+ +
Sbjct: 269 IDHN-RLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRVKNVYT-WNVLISGYAMNGRGE 326
Query: 303 LGEQIAKRLL 312
Q R++
Sbjct: 327 SALQAFSRMI 336
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 38/200 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR I + LR N L+++Y KCG +A ++F M +V V+I+ Y
Sbjct: 261 QGRWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAM-RVKNVYTWNVLISGY 319
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+G E+A + FSR M + +P+EVT +
Sbjct: 320 AMNGRGESALQAFSR-------------------------------MIMEKFKPDEVTFL 348
Query: 121 CVLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
VL AC G + GR + M + R + H G ++++ R G +D+A Q+ + M
Sbjct: 349 GVLCACCHQGLVNEGRTYFTSMKEEFGLRPRIEHY--GCMVDLLGRAGFLDEAQQLIQAM 406
Query: 178 K-ERDVTTYNSLIAGLAMHG 196
+ D + L+ +HG
Sbjct: 407 SMQPDPIIWRELLGACRIHG 426
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/491 (43%), Positives = 317/491 (64%), Gaps = 4/491 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG ++ +K+GL +N L+ +YGK G ++ ++F + D+ + +I Y
Sbjct: 133 EGEQVRIHAVKVGLENNVFVVNALIGMYGKWGLVGESQKVFQWAVD-RDLYSWNTLIAAY 191
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V G + A E+F ++ +D V W+ +I G V+ G ALD F +M + +PNE T+V
Sbjct: 192 VGSGNMSLAKELFDGMRERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQIGPKPNEYTLV 251
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
L+ACS L AL+ G+WIH+Y+GK I +N + ++I+MY++CG+I+ A +VF E K +
Sbjct: 252 SALAACSNLVALDQGKWIHAYIGKGEIKMNERLLASIIDMYAKCGEIESASRVFFEHKVK 311
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+ V +N++I G AMHG EA+ +F +M + I P KVTF+ +LNACSHG +V+ G
Sbjct: 312 QKVWLWNAMIGGFAMHGMPNEAINVFEQMKVEKISPNKVTFIALLNACSHGYMVEEGKLY 371
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F+ M DY I P+IEHYGC+VDLLSR G +EA D I++M +APD + G+LL+AC+I+
Sbjct: 372 FRLMVSDYAITPEIEHYGCMVDLLSRSGLLKEAEDMISSMPMAPDVAIWGALLNACRIYK 431
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE-PGCSS 358
++ G +I + + G +VLLSN Y++SG+W EA +R K + + +K+ PGCSS
Sbjct: 432 DMERGYRIGRIIKGMDPNHIGCHVLLSNIYSTSGRWNEARILREKNEISRDRKKIPGCSS 491
Query: 359 IEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE-KEWAL 417
IE+ H+F++GD HPQ +IY + E+ +K GY P +LHDI+D E KE AL
Sbjct: 492 IELKGTFHQFLVGDQSHPQSREIYSFLDEMTTKLKSAGYVPELGELLHDIDDEEDKETAL 551
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
++HSE+LAI +GL++T T IR+VKNLRVC DCH K I+ + R IIVRDR R+HHF
Sbjct: 552 SVHSEKLAIAFGLMNTANGTPIRIVKNLRVCGDCHQATKFISKVYNRVIIVRDRTRYHHF 611
Query: 478 ENGTCSCGDYW 488
E+G CSC DYW
Sbjct: 612 EDGICSCKDYW 622
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 167/415 (40%), Gaps = 102/415 (24%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
++ H Q++ L S+ + KL++L C A +LFD++P+ D+ MI
Sbjct: 33 KQTHAQLITTALISHPVSANKLLKL-AACASLSYAHKLFDQIPQ-PDLFIYNTMIKA--- 87
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTIVC 121
H L ++ C ++I +FR + +D + PN + V
Sbjct: 88 HSLSPHS-------------CHNSLI--------------VFRSLTQDLGLFPNRYSFVF 120
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
SAC ++ G + + K ++ N V ALI MY + G + ++ +VF+ +RD
Sbjct: 121 AFSACGNGLGVQEGEQVRIHAVKVGLENNVFVVNALIGMYGKWGLVGESQKVFQWAVDRD 180
Query: 182 VTTYNSL-------------------------------IAGLAMHGRSIEAVEMFREMIN 210
+ ++N+L IAG G +EA++ F +M+
Sbjct: 181 LYSWNTLIAAYVGSGNMSLAKELFDGMRERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQ 240
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEI----------------------------FQS 242
G +P + T V L ACS+ +D G I +S
Sbjct: 241 IGPKPNEYTLVSALAACSNLVALDQGKWIHAYIGKGEIKMNERLLASIIDMYAKCGEIES 300
Query: 243 MTR---DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACK 296
+R ++ ++ ++ + ++ + G P EA + M KI+P+ + +LL+AC
Sbjct: 301 ASRVFFEHKVKQKVWLWNAMIGGFAMHGMPNEAINVFEQMKVEKISPNKVTFIALLNACS 360
Query: 297 IHGKLQLGEQIAKRLLDCRSADSGT---YVLLSNAYASSGKWKEAVQIRAKMKEA 348
HG + ++ RL+ A + Y + + + SG KEA + + M A
Sbjct: 361 -HGYMVEEGKLYFRLMVSDYAITPEIEHYGCMVDLLSRSGLLKEAEDMISSMPMA 414
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 107/245 (43%), Gaps = 21/245 (8%)
Query: 149 LNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSI-EAVEMFRE 207
++H V + + C + A ++F+++ + D+ YN++I ++ S ++ +FR
Sbjct: 45 ISHPVSANKLLKLAACASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPHSCHNSLIVFRS 104
Query: 208 MINQ-GIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRV 266
+ G+ P + +FV +AC +G V G ++ + G+E + ++ + +
Sbjct: 105 LTQDLGLFPNRYSFVFAFSACGNGLGVQEGEQVRIHAVK-VGLENNVFVVNALIGMYGKW 163
Query: 267 GRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD-CRSADSGTYVLL 325
G E+ + + D +L++A G + L AK L D R D ++ +
Sbjct: 164 GLVGESQK-VFQWAVDRDLYSWNTLIAAYVGSGNMSL----AKELFDGMRERDVVSWSTI 218
Query: 326 SNAYASSGKWKEAVQIRAKMKEAG--------VQKEPGCSSIEVNNE---IHEFI-LGDI 373
Y G + EA+ KM + G V CS++ ++ IH +I G+I
Sbjct: 219 IAGYVQVGCFMEALDFFHKMLQIGPKPNEYTLVSALAACSNLVALDQGKWIHAYIGKGEI 278
Query: 374 RHPQR 378
+ +R
Sbjct: 279 KMNER 283
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/487 (41%), Positives = 306/487 (62%), Gaps = 33/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H ++K GL S+ LV ++ CG+ A LF++MP+ D+V+ +I +V
Sbjct: 533 GKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPK-RDLVSWNTIIAGFV 591
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+HG + AF D F+ MQ ++P+++T
Sbjct: 592 QHGKNQVAF-------------------------------DYFKMMQESGIKPDKITFTG 620
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+AC+ AL GR +H+ + + D + +VG LI+MY++CG I+ A QVF ++ +++
Sbjct: 621 LLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKN 680
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ S+I G A HGR EA+E+F +M +G++P +TFVG L+AC+H GL++ G FQ
Sbjct: 681 VYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQ 740
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM +++ IEP++EHYGC+VDL R G EA +FI M++ PD + G+LL AC++H +
Sbjct: 741 SM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNV 799
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+L E+ A++ L+ D+G +V+LSN YA++G WKE ++R M + GV K+PG S IEV
Sbjct: 800 ELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEV 859
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ ++H F D HPQ E+I+ +++ L ++ GY P T VLHD+ED EKE AL HS
Sbjct: 860 DGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHS 919
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ERLAI YGL+ T P T I + KNLRVC DCH+ K I+ ITKR+II RD NRFHHF++G
Sbjct: 920 ERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGV 979
Query: 482 CSCGDYW 488
CSCGD+W
Sbjct: 980 CSCGDFW 986
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 202/438 (46%), Gaps = 68/438 (15%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G I+ + K G++ + L+ +Y KCG A Q+FD+M E DV + +++ Y
Sbjct: 128 DGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMRE-KDVYSWNLLLGGY 186
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V+HGL E AF+ L +M +D+V+P++ T V
Sbjct: 187 VQHGLYEEAFK-------------------------------LHEQMVQDSVKPDKRTFV 215
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L+AC+ ++ GR +++ + K D + VG ALINM+ +CGDI A +VF+ + R
Sbjct: 216 SMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTR 275
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D+ T+ S+I GLA HGR +A +F+ M +G++P KV FV +L AC+H ++ G ++
Sbjct: 276 DLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVH 335
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRV-------------------------------GRP 269
M ++ G + +I I+ + ++ GR
Sbjct: 336 ARM-KEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRI 394
Query: 270 EEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC-RSADSGTYVLL 325
+EA+ F M I P+ + S+L AC L+ G+QI +++ +D L
Sbjct: 395 DEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTAL 454
Query: 326 SNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKM 385
+ YA G K+A ++ K+ + V + V +E ++ L + +E I
Sbjct: 455 LSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNS 514
Query: 386 QELKQIVKLEGYSPSTEV 403
I+ + S S E+
Sbjct: 515 STFTSILNVCKSSDSLEL 532
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 191/358 (53%), Gaps = 17/358 (4%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPEC---NDVVASTVMI 57
E ++H Q+++ ++ ++ T + ++ +L++ + + D+ T +I
Sbjct: 194 EAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALI 253
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
N +++ G + +A +VF + +D V WT+MI GL R+G +A +LF+ M+ + V+P++V
Sbjct: 254 NMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKV 313
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
V +L AC+ ALE G+ +H+ M + D VG A+++MY++CG ++ AL+VF+ +
Sbjct: 314 AFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLV 373
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
K R+V ++ ++IAG A HGR EA F +MI GI P +VTF+ +L ACS + G
Sbjct: 374 KGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQ 433
Query: 238 EIFQSMTR-DYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLS 293
+I + YG + ++ ++ + ++ G ++A ++ I+ + + M+ + +
Sbjct: 434 QIQDHIIEAGYGSDDRVR--TALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQ 491
Query: 294 ACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASS-----GKWKEAVQIRAKMK 346
+ L + + K + +S T+ + N SS GKW + ++A ++
Sbjct: 492 HEQYDNALATFQALLKEGI---KPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLE 546
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 146/306 (47%), Gaps = 14/306 (4%)
Query: 78 VKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRW 137
+KDT A+++ L + G+ A+ + + +++ T +L C + L G
Sbjct: 72 IKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGER 131
Query: 138 IHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR 197
I++++ K + + + LINMY++CG+ A Q+F++M+E+DV ++N L+ G HG
Sbjct: 132 IYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGL 191
Query: 198 SIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYG 257
EA ++ +M+ ++P K TFV +LNAC+ VD G E++ + + G + +
Sbjct: 192 YEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILK-AGWDTDLFVGT 250
Query: 258 CIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL-LDCRS 316
++++ + G +A N+ D + S+++ HG+ + + +R+ +
Sbjct: 251 ALINMHIKCGDIGDATKVFDNLP-TRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQ 309
Query: 317 ADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE-----------PGCSSIEVNNEI 365
D +V L A ++ ++ A+MKE G E C S+E E+
Sbjct: 310 PDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEV 369
Query: 366 HEFILG 371
+ + G
Sbjct: 370 FDLVKG 375
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 33/196 (16%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR +H + + + L+ +Y KCG +DA Q+F ++P+ N V + T MI Y
Sbjct: 633 EGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKN-VYSWTSMITGY 691
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+HG R E AL+LF +MQ++ V+P+ +T V
Sbjct: 692 AQHG----------------------------RGKE---ALELFYQMQQEGVKPDWITFV 720
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
LSAC+ G +E G M + I+ G +++++ R G +++A++ +M+ E
Sbjct: 721 GALSACAHAGLIEEGLHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVE 780
Query: 180 RDVTTYNSLIAGLAMH 195
D + +L+ +H
Sbjct: 781 PDSRVWGALLGACQVH 796
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 197/488 (40%), Positives = 302/488 (61%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+EIHG V++ G+ S DV + +++ Y
Sbjct: 224 KGKEIHGYVIRKGIDS--------------------------------DVYIGSSLVDMY 251
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ +E++ VFS + +D++ W +++ G V+NG AL LFR+M VRP V
Sbjct: 252 AKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFS 311
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+ AC+ L L LG+ +H Y+ + N + AL++MYS+CG+I A ++F+ M
Sbjct: 312 SVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLH 371
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++ ++I G A+HG EAV +F EM QG++P +V FV VL ACSH GLVD + F
Sbjct: 372 DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYF 431
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SMT+ YG+ ++EHY + DLL R G+ EEAYDFI+ M++ P + +LLS+C +H
Sbjct: 432 NSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKN 491
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
L+L E++A+++ S + G YVL+ N YAS+G+WKE ++R ++++ G++K+P CS IE
Sbjct: 492 LELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIE 551
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+ N+ H F+ GD HP ++I + ++ + + ++ EGY T VLHD+++ K L H
Sbjct: 552 MKNKTHGFVSGDRSHPSMDRINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGH 611
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLA+ +G+I+T+P TTIRV KN+R+C DCH IK I+ IT+R+IIVRD +RFHHF G
Sbjct: 612 SERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRG 671
Query: 481 TCSCGDYW 488
+CSCGDYW
Sbjct: 672 SCSCGDYW 679
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 131/251 (52%), Gaps = 2/251 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D+ ++N Y + +++ +VF + KD V + +I G ++G AL + REM
Sbjct: 139 DLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMG 198
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+++P+ T+ VL S+ + G+ IH Y+ + ID + +G +L++MY++ I+
Sbjct: 199 TSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIE 258
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+ +VF + RD ++NSL+AG +GR EA+ +FR+M++ +RP V F V+ AC+
Sbjct: 259 DSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACA 318
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H + LG ++ + R G I +VD+ S+ G + A M + D +
Sbjct: 319 HLATLHLGKQLHGYVLRG-GFGRNIFIASALVDMYSKCGNIQAARKIFDRMNL-HDEVSW 376
Query: 289 GSLLSACKIHG 299
+++ +HG
Sbjct: 377 TAIIMGHALHG 387
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 126/290 (43%), Gaps = 33/290 (11%)
Query: 51 VASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD 110
+++++I+ Y L+ A VF ++ + W ++I +RAL F EM+
Sbjct: 40 TSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRAS 99
Query: 111 NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
P+ VL +C+ + L G +H ++ + +D + G AL+NMYS+ ID
Sbjct: 100 GRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSV 159
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-- 228
+VFE M +DV +YN++IAG A G +A+ M REM ++P T VL S
Sbjct: 160 RKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEY 219
Query: 229 ---------HGGLVDLGFE----IFQSMTRDYGIEPQIE---------------HYGCIV 260
HG ++ G + I S+ Y +IE + +V
Sbjct: 220 VDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLV 279
Query: 261 DLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQI 307
+ GR EA M K+ P + S++ AC L LG+Q+
Sbjct: 280 AGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQL 329
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 93/229 (40%), Gaps = 36/229 (15%)
Query: 148 DLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
L+H +I++Y+ + +AL VF+ ++ V + S+I A+ F E
Sbjct: 36 SLSHTSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVE 95
Query: 208 MINQGIRPTKVTFVGVLNACS-----------HGGLVDLGFEI----------------- 239
M G P F VL +C+ HG +V LG +
Sbjct: 96 MRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLG 155
Query: 240 FQSMTRDYGIEPQ--IEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSA 294
S+ + + + P+ + Y ++ ++ G E+A + M + PD L S+L
Sbjct: 156 IDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPI 215
Query: 295 CKIHGKLQLGEQIAKRLLDCRSADSGTYV--LLSNAYASSGKWKEAVQI 341
+ + G++I ++ + DS Y+ L + YA S + +++ ++
Sbjct: 216 FSEYVDVLKGKEIHGYVIR-KGIDSDVYIGSSLVDMYAKSARIEDSERV 263
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/479 (43%), Positives = 301/479 (62%), Gaps = 3/479 (0%)
Query: 13 GLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPE---CNDVVASTVMINCYVEHGLVENA 69
G+R + T ++++ + + ++ + V +T ++ YV+ G + A
Sbjct: 214 GMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKA 273
Query: 70 FEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQL 129
EVF +++ KD V W AM+ G NG ALDLF MQ + VRP+ + LSAC++L
Sbjct: 274 REVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRL 333
Query: 130 GALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLI 189
GAL+LGR + N ++G ALI+MY++CG +A VF++M+++D+ +N++I
Sbjct: 334 GALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMI 393
Query: 190 AGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGI 249
GL M G A + +M G++ TF+G+L +C+H GL+ G F +MT+ Y I
Sbjct: 394 LGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHI 453
Query: 250 EPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAK 309
P+IEHYGCIVDLLSR G +EA+ I +M + + ++LG+LL CKIH +L E +
Sbjct: 454 SPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLT 513
Query: 310 RLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFI 369
+L+ +SG YV+LSN Y++ G+W++A ++R MKE GV+K P CS +E ++HEF
Sbjct: 514 QLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFR 573
Query: 370 LGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYG 429
+GD HP +QIYKK+ EL +K GY P+TEVV+ D+ED EKE L HSE+LAI +
Sbjct: 574 VGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFN 633
Query: 430 LISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
L+ T P TIRV KNLRVC+DCH+ IKLI+ IT R+IIVRD NRFH F +G+CSC DYW
Sbjct: 634 LLVTGPGETIRVTKNLRVCSDCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 692
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 124/238 (52%), Gaps = 1/238 (0%)
Query: 43 EMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALD 102
++P + T ++ Y GL+ A VF + TV WTA+I + G++ A+
Sbjct: 146 KLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVH 205
Query: 103 LFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYS 162
+ R + +RP+ T V VL+AC+++ L G + + I + V A +++Y
Sbjct: 206 VARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYV 265
Query: 163 RCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVG 222
+CG++ KA +VF++M+++D + +++ G A +G EA+++F M +G+RP G
Sbjct: 266 KCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAG 325
Query: 223 VLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
L+AC+ G +DLG + + + D ++ + ++D+ ++ G EA+ M+
Sbjct: 326 ALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTA-LIDMYAKCGSTAEAWVVFQQMR 382
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 111/274 (40%), Gaps = 39/274 (14%)
Query: 114 PNEVTIVCVLSACSQLG-ALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
P+ +T L + S+L L G +H+ K N V +L+ +Y+RCG + +A +
Sbjct: 115 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 174
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
VF+EM ++ +LI G EAV + R G+RP T V VL AC+
Sbjct: 175 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 234
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRV-------------------------- 266
+ G ++++ ++ GI + VDL +
Sbjct: 235 LATGETVWRAAEQE-GIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVG 293
Query: 267 -----GRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSAD 318
G P EA D M+ + PD + LSAC G L LG Q A R++D
Sbjct: 294 GYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQ-AIRMVDWDEFL 352
Query: 319 SGTYV--LLSNAYASSGKWKEAVQIRAKMKEAGV 350
+ L + YA G EA + +M++ +
Sbjct: 353 DNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDI 386
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/491 (41%), Positives = 312/491 (63%), Gaps = 5/491 (1%)
Query: 2 GREIHGQVLKLG-LRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
G ++H Q L LG S+ ++++Y KCG + A +FDEMPE DV++ T +I Y
Sbjct: 128 GAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPE-RDVISWTGLIVAY 186
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G + A ++F + VKD V WTAM+ G +N AL++FR ++ + V +EVT+V
Sbjct: 187 TRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLV 246
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDL--NHIVGGALINMYSRCGDIDKALQVFEEMK 178
V+SAC+QLGA + WI + N +VG ALI+MYS+CG++++A VF+ M+
Sbjct: 247 GVISACAQLGASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGMR 306
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
ER+V +Y+S+I G A+HGR+ A+++F +M+ G++P VTFVGVL ACSH GLVD G +
Sbjct: 307 ERNVFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAGLVDQGQQ 366
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
+F SM + YG+ P E Y C+ DLLSR G E+A + M + D + G+LL A +H
Sbjct: 367 LFASMEKCYGVAPTAELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWGALLGASHVH 426
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
G + E +KRL + + G Y+LLSN YAS+G+W + ++R ++E ++K PG S
Sbjct: 427 GNPDVAEIASKRLFELEPDNIGNYLLLSNTYASAGRWDDVSKVRKLLREKNLKKNPGWSW 486
Query: 359 IEVNNE-IHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
+E N IH+F+ GD+ HP+ +I K++ +L + +K GY P+ + + I D EK L
Sbjct: 487 VEAKNGMIHKFVAGDVSHPKINEIKKELNDLLERLKGIGYQPNLSSLPYGINDREKRLLL 546
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LA+ +GL+ST +TI+++KNLR+C DCH ++ + +T RKI+VRD RFHHF
Sbjct: 547 MAHSEKLALAFGLLSTDVGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNTRFHHF 606
Query: 478 ENGTCSCGDYW 488
NG CSC ++W
Sbjct: 607 LNGACSCSNFW 617
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 150/350 (42%), Gaps = 83/350 (23%)
Query: 72 VFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGA 131
+FS++ + WTA+I G +++AL + M++ V P T + SAC+ +
Sbjct: 65 LFSQLHTPNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRH 124
Query: 132 LELGRWIHS---YMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV------ 182
LG +H+ +G DL V A+I+MY +CG + A VF+EM ERDV
Sbjct: 125 SALGAQLHAQTLLLGGFSSDL--YVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGL 182
Query: 183 -------------------------TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTK 217
T+ +++ G A + ++A+E+FR + ++G+ +
Sbjct: 183 IVAYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDE 242
Query: 218 VTFVGVLNACSHGGLVDLGFEIFQSMTRD------YGIEPQIEHYGCIVDLLSRVGRPEE 271
VT VGV++AC+ LG + + RD +G+ + ++D+ S+ G EE
Sbjct: 243 VTLVGVISACAQ-----LGASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEE 297
Query: 272 AYDFITNMK----------------------------------IAPDHIMLGSLLSACKI 297
AYD M+ + P+H+ +L+AC
Sbjct: 298 AYDVFKGMRERNVFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSH 357
Query: 298 HGKLQLGEQIAKRLLDCR--SADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
G + G+Q+ + C + + Y +++ + +G ++A+Q+ M
Sbjct: 358 AGLVDQGQQLFASMEKCYGVAPTAELYACMTDLLSRAGYLEKALQLVETM 407
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/453 (45%), Positives = 285/453 (62%), Gaps = 1/453 (0%)
Query: 36 DAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNG 95
+A +LF+ MP C +V + M+ Y + G++E A VF + KD V W AM+ + G
Sbjct: 179 EAKELFNMMP-CRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGG 237
Query: 96 EMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGG 155
L LF EM R N CVLS C+ + ALE G +H + + + VG
Sbjct: 238 CSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGN 297
Query: 156 ALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRP 215
AL+ MY +CG+++ A FEEM+ERDV ++N++IAG A HG EA+E+F M +P
Sbjct: 298 ALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKP 357
Query: 216 TKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDF 275
+T VGVL ACSH GLV+ G F SM D+G+ + EHY C++DLL R GR EA+D
Sbjct: 358 DDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDL 417
Query: 276 ITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKW 335
+ +M PD M G+LL A +IH +LG A+++ + ++G YVLLSN YASSGKW
Sbjct: 418 MKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKW 477
Query: 336 KEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLE 395
++A ++R M+E GV+K PG S IEV N++H F GD HP++E+IY +++L +K
Sbjct: 478 RDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKA 537
Query: 396 GYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMI 455
GY +T++VLHD+E+ EKE L HSE+LA+ YG+++ P IRV+KNLRVC DCH+
Sbjct: 538 GYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAF 597
Query: 456 KLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
K I+ I R I++RD NRFHHF G+CSCGDYW
Sbjct: 598 KYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 630
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 143/341 (41%), Gaps = 65/341 (19%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
++ Y + G ++A LF+ E DV++ +++ YV+ G + A E+F R+ +D V
Sbjct: 43 MLAAYVRNGRVEEARGLFNSRTEW-DVISWNALMSGYVQWGKMSEARELFDRMPGRDVVS 101
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W M+ G R G+M A LF +V T V+S +Q G LE R + M
Sbjct: 102 WNIMVSGYARRGDMVEARRLFDAAPVRDV----FTWTAVVSGYAQNGMLEEARRVFDAMP 157
Query: 144 -KHRIDLNHIVGG-----------ALINM---------------YSRCGDIDKALQVFEE 176
++ + N +V L NM Y++ G +++A VF+
Sbjct: 158 ERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDT 217
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
M ++D ++ +++A + G S E +++F EM G + F VL+ C+ ++ G
Sbjct: 218 MPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECG 277
Query: 237 FEIFQSMTR-DYGI-----------------------------EPQIEHYGCIVDLLSRV 266
++ + R YG+ E + + ++ +R
Sbjct: 278 MQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARH 337
Query: 267 GRPEEA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLG 304
G +EA +D + PD I L +L+AC G ++ G
Sbjct: 338 GFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKG 378
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 134/341 (39%), Gaps = 51/341 (14%)
Query: 44 MPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDL 103
MP D V VMI+ + HGLV A F KD V W M+ VRNG + A L
Sbjct: 1 MP-VRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGL 59
Query: 104 FREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM-GKHRIDLNHIVGG------- 155
F +V ++ ++S Q G + R + M G+ + N +V G
Sbjct: 60 FNSRTEWDV----ISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDM 115
Query: 156 -------------------ALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHG 196
A+++ Y++ G +++A +VF+ M ER+ ++N+++A
Sbjct: 116 VEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRR 175
Query: 197 RSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHY 256
EA E+F M + + G A G+++ +F +M + + +
Sbjct: 176 MMDEAKELFNMMPCRNVASWNTMLTGYAQA----GMLEEAKAVFDTMPQKDAVS-----W 226
Query: 257 GCIVDLLSRVGRPEEAYDFITNMKIAPDHI---MLGSLLSACKIHGKLQLGEQIAKRLLD 313
++ S+ G EE M + + +LS C L+ G Q+ RL+
Sbjct: 227 AAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLI- 285
Query: 314 CRSADSGTYVLLSNA----YASSGKWKEAVQIRAKMKEAGV 350
A G + NA Y G ++A +M+E V
Sbjct: 286 --RAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDV 324
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 34/196 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++HG++++ G L+ +Y KCG +DA F+EM E DVV+ MI Y
Sbjct: 277 GMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEE-RDVVSWNTMIAGYA 335
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG + A E+F ++ T +P+++T+V
Sbjct: 336 RHGFGKEALEIFDMMRTTST-------------------------------KPDDITLVG 364
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VL+ACS G +E G + +S + +I++ R G + +A + ++M E
Sbjct: 365 VLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFE 424
Query: 180 RDVTTYNSLIAGLAMH 195
D T + +L+ +H
Sbjct: 425 PDSTMWGALLGASRIH 440
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/479 (43%), Positives = 301/479 (62%), Gaps = 3/479 (0%)
Query: 13 GLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPE---CNDVVASTVMINCYVEHGLVENA 69
G+R + T ++++ + + ++ + V +T ++ YV+ G + A
Sbjct: 167 GMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKA 226
Query: 70 FEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQL 129
EVF +++ KD V W AM+ G NG ALDLF MQ + VRP+ + LSAC++L
Sbjct: 227 REVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRL 286
Query: 130 GALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLI 189
GAL+LGR + N ++G ALI+MY++CG +A VF++M+++D+ +N++I
Sbjct: 287 GALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMI 346
Query: 190 AGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGI 249
GL M G A + +M G++ TF+G+L +C+H GL+ G F +MT+ Y I
Sbjct: 347 LGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHI 406
Query: 250 EPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAK 309
P+IEHYGCIVDLLSR G +EA+ I +M + + ++LG+LL CKIH +L E +
Sbjct: 407 SPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLT 466
Query: 310 RLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFI 369
+L+ +SG YV+LSN Y++ G+W++A ++R MKE GV+K P CS +E ++HEF
Sbjct: 467 QLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFR 526
Query: 370 LGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYG 429
+GD HP +QIYKK+ EL +K GY P+TEVV+ D+ED EKE L HSE+LAI +
Sbjct: 527 VGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFN 586
Query: 430 LISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
L+ T P TIRV KNLRVC+DCH+ IKLI+ IT R+IIVRD NRFH F +G+CSC DYW
Sbjct: 587 LLVTGPGETIRVTKNLRVCSDCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 645
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 124/238 (52%), Gaps = 1/238 (0%)
Query: 43 EMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALD 102
++P + T ++ Y GL+ A VF + TV WTA+I + G++ A+
Sbjct: 99 KLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVH 158
Query: 103 LFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYS 162
+ R + +RP+ T V VL+AC+++ L G + + I + V A +++Y
Sbjct: 159 VARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYV 218
Query: 163 RCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVG 222
+CG++ KA +VF++M+++D + +++ G A +G EA+++F M +G+RP G
Sbjct: 219 KCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAG 278
Query: 223 VLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
L+AC+ G +DLG + + + D ++ + ++D+ ++ G EA+ M+
Sbjct: 279 ALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTA-LIDMYAKCGSTAEAWVVFQQMR 335
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 111/274 (40%), Gaps = 39/274 (14%)
Query: 114 PNEVTIVCVLSACSQLG-ALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
P+ +T L + S+L L G +H+ K N V +L+ +Y+RCG + +A +
Sbjct: 68 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 127
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
VF+EM ++ +LI G EAV + R G+RP T V VL AC+
Sbjct: 128 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 187
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRV-------------------------- 266
+ G ++++ ++ GI + VDL +
Sbjct: 188 LATGETVWRAAEQE-GIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVG 246
Query: 267 -----GRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSAD 318
G P EA D M+ + PD + LSAC G L LG Q A R++D
Sbjct: 247 GYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQ-AIRMVDWDEFL 305
Query: 319 SGTYV--LLSNAYASSGKWKEAVQIRAKMKEAGV 350
+ L + YA G EA + +M++ +
Sbjct: 306 DNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDI 339
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 194/440 (44%), Positives = 294/440 (66%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D+ ++ +++ Y++ G +E+A VFS + D V WT MI G V NG+ AL + +M+
Sbjct: 1172 DLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMR 1231
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
V+P+E T ++ ACS L ALE GR IH+ + K + V +L++MY++CG+I+
Sbjct: 1232 LSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIE 1291
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +F+ R + ++N++I GLA HG + EA++ F+ M ++G+ P +VTF+GVL+ACS
Sbjct: 1292 DARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACS 1351
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLV +E F SM ++YGIEP+IEHY C+VD LSR GR EEA I++M M
Sbjct: 1352 HSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASASMY 1411
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+LL+AC++ + G+++A++LL +DS YVLLSN YA++ +W+ R M++
Sbjct: 1412 RTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKV 1471
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
V+K+PG S +++ N++H F+ GD H + + IY K++ + + ++ EGY P T+ L D+
Sbjct: 1472 NVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYVPDTDFALVDV 1531
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
E+ +KE +L HSE+LAI YGL+ T P TT+RV+KNLRVC DCHS IK I+ + KR+I++
Sbjct: 1532 EEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHSAIKYISKVFKREIVL 1591
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD NRFHHF NG CSCGDYW
Sbjct: 1592 RDANRFHHFRNGICSCGDYW 1611
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 152/352 (43%), Gaps = 57/352 (16%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
+HG +K+GL+ + LV +Y K G ++A LFD M DVV VM+ YV+
Sbjct: 782 LHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMA-VRDVVLWNVMMKAYVDTC 840
Query: 65 LVENAFEVFSR-------------------VKVK------------------------DT 81
L A +FS VK K D
Sbjct: 841 LEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLFMYDDDGSDV 900
Query: 82 VCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSY 141
+ W + ++ GE A+D F +M V + +T V +L+ + L LELG+ IH
Sbjct: 901 IVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGI 960
Query: 142 MGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEA 201
+ + +D VG LINMY + G + +A VF +M E D+ ++N++I+G + G +
Sbjct: 961 VMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECS 1020
Query: 202 VEMFREMINQGIRPTKVTFVGVLNACS--HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI 259
V MF ++ + P + T VL ACS GG L +I + G+ +
Sbjct: 1021 VGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYY-LATQI-HACAMKAGVVLDSFVSTAL 1078
Query: 260 VDLLSRVGRPEEA---------YDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
+D+ S+ G+ EEA +D + I +I+ G A +++ +Q
Sbjct: 1079 IDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQ 1130
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 133/284 (46%), Gaps = 33/284 (11%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D ST +I+ Y + G +E A +F D W A++ G + +G+ +AL L+ MQ
Sbjct: 1071 DSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQ 1130
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
R +++T+V A L L+ G+ IH+ + K +L+ V +++MY +CG+++
Sbjct: 1131 ESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEME 1190
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +VF E+ D + ++I+G +G+ A+ + +M ++P + TF ++ ACS
Sbjct: 1191 SARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACS 1250
Query: 229 -----------HGGLVDL--GFEIF--QSMTRDYG----IEP-----------QIEHYGC 258
H +V L F+ F S+ Y IE +I +
Sbjct: 1251 LLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNA 1310
Query: 259 IVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHG 299
++ L++ G +EA F MK + PD + +LSAC G
Sbjct: 1311 MIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSG 1354
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 124/248 (50%), Gaps = 7/248 (2%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+IN YV+ G V A VF ++ D + W MI G +G ++ +F + RD++ P+
Sbjct: 976 LINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPD 1035
Query: 116 EVTIVCVLSACSQL-GALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
+ T+ VL ACS L G L IH+ K + L+ V ALI++YS+ G +++A +F
Sbjct: 1036 QFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLF 1095
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
D+ ++N+++ G + G +A+ ++ M G R ++T V A GGLV
Sbjct: 1096 VNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAA--GGLVG 1153
Query: 235 L--GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
L G +I + + G + ++D+ + G E A + + +PD + +++
Sbjct: 1154 LKQGKQIHAVVVK-RGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIP-SPDDVAWTTMI 1211
Query: 293 SACKIHGK 300
S C +G+
Sbjct: 1212 SGCVENGQ 1219
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 31/220 (14%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ H ++L G +R L+ +Y KCG A +LFD P+ N
Sbjct: 675 GKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTN------------- 721
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMAR-ALDLFREMQRDNVRPNEVTIV 120
+D V W A++ L + + + LFR ++R V T+
Sbjct: 722 -----------------RDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLA 764
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V C + +H Y K + + V GAL+N+Y++ G I +A +F+ M R
Sbjct: 765 PVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVR 824
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTF 220
DV +N ++ EA+ +F E G RP VT
Sbjct: 825 DVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTL 864
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 76/170 (44%), Gaps = 7/170 (4%)
Query: 132 LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE--RDVTTYNSLI 189
L LG+ H+ + + V LI MY++CG + A ++F+ + RD+ T+N+++
Sbjct: 672 LSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAIL 731
Query: 190 AGLAMHG-RSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYG 248
+ LA H +S + +FR + + T+ T V C E G
Sbjct: 732 SALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSAS-ESLHGYAVKIG 790
Query: 249 IEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSAC 295
++ + G +V++ ++ G EA +D + + ++M+ + + C
Sbjct: 791 LQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTC 840
>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
Length = 1280
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/489 (43%), Positives = 298/489 (60%), Gaps = 31/489 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG +H + K G + + LV LYG CG F+ A ++FDEMP
Sbjct: 822 EGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMP--------------- 866
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V+ ++ V W +M++ NG L +F EM + P+ TIV
Sbjct: 867 ---------------VRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIV 911
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VL+AC++ GAL LGR +H Y+ K + N V ALI++Y++CG ++ A ++FEEM
Sbjct: 912 SVLTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLG 971
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
R V ++ SLI GLA +G EA+E+F M + + PT++T VGVL ACSH GLVD GF
Sbjct: 972 RTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRY 1031
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F M DYGI P+IEH GC+VDLL R GR EEAYD+I M + P+ ++ +LL +C +H
Sbjct: 1032 FDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHK 1091
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
KL+LG+ +RL++ SG YVLLSN YA+ G W + +R M + V+K PG S +
Sbjct: 1092 KLELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLV 1151
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E+ N ++EF++GD HP+ EQIY+ + E+ + ++ EGY P T VL DIE+ EKE AL
Sbjct: 1152 ELRNSVYEFVMGDRSHPESEQIYEMLAEIAERLRREGYIPRTSNVLADIEEEEKETALNY 1211
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSERLAI + L+ + P IR++KNLR+C DCH LI+ + R+IIVRDR+RFHHF+
Sbjct: 1212 HSERLAIAFALLKSLPGIPIRIIKNLRMCGDCHVAFNLISKVYDREIIVRDRSRFHHFQG 1271
Query: 480 GTCSCGDYW 488
G CSC DYW
Sbjct: 1272 GACSCKDYW 1280
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 6/202 (2%)
Query: 100 ALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALIN 159
AL+L R R P+ T ++ AC++L AL G +H+ K+ V +L++
Sbjct: 791 ALELHR---RRLALPDTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVH 847
Query: 160 MYSRCGDIDKALQVFEEM--KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTK 217
+Y CG + A +VF+EM + R++ ++NS++ A +GR E + +F EM+ P
Sbjct: 848 LYGACGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDG 907
Query: 218 VTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFIT 277
T V VL AC+ G + LG + G+ ++DL ++ G +A
Sbjct: 908 FTIVSVLTACAEFGALALGRRV-HVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFE 966
Query: 278 NMKIAPDHIMLGSLLSACKIHG 299
M + + SL+ +G
Sbjct: 967 EMGLGRTVVSWTSLIVGLAANG 988
>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 558
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/488 (43%), Positives = 301/488 (61%), Gaps = 33/488 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++H + KLG S+ + L+ YG CG
Sbjct: 103 GLDLHSLLFKLGFDSDVYVQNGLIHFYGCCG----------------------------- 133
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR-DNVRPNEVTIV 120
++ A +VF + +D V W++MI +NG AL LF+ MQ V+P+EV ++
Sbjct: 134 ---FLDFALKVFEEMPERDLVSWSSMIACFAKNGFGYEALALFQRMQLVGTVKPDEVIVL 190
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+SA S LG LELG+WI ++ ++ ++ +G AL++M+SRCG I+++++VF+EM ER
Sbjct: 191 SVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGER 250
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+V T+ +LI GLA+HGRS EA+ MF EM N G +P VTF GVL ACSHGGLV G+ +F
Sbjct: 251 NVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVF 310
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+S+ +YG+EP EHYGC+VDLL R G EA F+ M I P+ I+ +LL AC H
Sbjct: 311 ESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTLLGACVNHNY 370
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++L E++ +++ + S G YVLLSN Y G+W E +R M+E + K+PGCS I
Sbjct: 371 IELAEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAEKAGVRNSMREKRISKKPGCSLIN 430
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
VN+ IHEF+ GD HPQ E I + + + +K+ GY+P VL DIE+ EKE L H
Sbjct: 431 VNHLIHEFVAGDNNHPQFESIREFLVSMIDSLKVVGYTPDISNVLFDIEEEEKESTLGYH 490
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LA+ + L+ K TIRV+KNLR+C+DCH +K +++ +R+II+RDRNRFHHF G
Sbjct: 491 SEKLAVAFALLCFKDSRTIRVMKNLRICHDCHCFMKYASDVFEREIIIRDRNRFHHFSKG 550
Query: 481 TCSCGDYW 488
+CSC DYW
Sbjct: 551 SCSCRDYW 558
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 122/233 (52%), Gaps = 7/233 (3%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A +F + DT + +I + + +L LF +M V P+ T VL AC++
Sbjct: 41 ARSIFDLIAFPDTFAFNTIIRAHA-DSSPSFSLSLFSKMAMAGVSPDHFTFPFVLKACAR 99
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
L + G +HS + K D + V LI+ Y CG +D AL+VFEEM ERD+ +++S+
Sbjct: 100 L---QTGLDLHSLLFKLGFDSDVYVQNGLIHFYGCCGFLDFALKVFEEMPERDLVSWSSM 156
Query: 189 IAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDY 247
IA A +G EA+ +F+ M G ++P +V + V++A S G ++LG I ++R+
Sbjct: 157 IACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRN- 215
Query: 248 GIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
G+E + +VD+ SR G EE+ M + + +L++ +HG+
Sbjct: 216 GLEFTVSLGTALVDMFSRCGCIEESMRVFDEMG-ERNVLTWTALINGLAVHGR 267
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/509 (41%), Positives = 312/509 (61%), Gaps = 23/509 (4%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +HG ++ G + LV++Y KCG +A ++FD + E DVV+ M+N Y
Sbjct: 32 GKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASKVFDRIKE-KDVVSWNAMVNGYS 90
Query: 62 EHGLVENAFEVFSRVKVKD----TVCWTAMIDGLVRNGEMARALDLFREMQRDN------ 111
+ G E+A +F +++ ++ V W+A+I + G LD+FREMQ
Sbjct: 91 QIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLGCETLDVFREMQHGEANDALE 150
Query: 112 -----------VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHI-VGGALIN 159
V+PN TI C L AC++L AL LGR IH+Y+ ++ D + V LI+
Sbjct: 151 LFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHAYILRNHFDSAFLYVANCLID 210
Query: 160 MYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVT 219
MY++ GDID A VF+ +K+++ ++ SL+ G MHGR EA+E+F EM G++P VT
Sbjct: 211 MYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALEVFDEMRRVGLQPDGVT 270
Query: 220 FVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM 279
+ VL ACSH G++D G E F SM++++G+ P EHY C+VDLL R GR EA + I M
Sbjct: 271 LLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACMVDLLGRAGRLNEAMELIEGM 330
Query: 280 KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAV 339
++ P I+ +LLS C+IH ++LGE AK+LL+ S + G+Y LLSN YA++ +WK+
Sbjct: 331 QMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSENDGSYTLLSNIYANARRWKDVA 390
Query: 340 QIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSP 399
++R+ MK +G++K PGCS ++ F + D HPQ +QIY+ ++ L Q +K+ GY P
Sbjct: 391 RVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADKTHPQSKQIYEILRSLTQRIKVLGYVP 450
Query: 400 STEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIA 459
T LHD++D EK L HSE+LA+ YG++ + P IR+ KNLRVC DCH+ I I+
Sbjct: 451 ETSFALHDVDDEEKVDLLFEHSEKLALAYGILISAPGAPIRITKNLRVCGDCHNAITYIS 510
Query: 460 NITKRKIIVRDRNRFHHFENGTCSCGDYW 488
I +II+RD +RFHHF+ G+CSC YW
Sbjct: 511 MIIDHEIILRDSSRFHHFKKGSCSCSGYW 539
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 132/267 (49%), Gaps = 31/267 (11%)
Query: 111 NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
++RP+ V++V VL AC+ +GA G+ +H + + VG AL++MY++CG +D+A
Sbjct: 8 DMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEA 67
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
+VF+ +KE+DV ++N+++ G + GR +A+ +F +M + I V++ V+ A +
Sbjct: 68 SKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQR 127
Query: 231 GL---------------VDLGFEIFQSMTRDYG-IEPQIEHYGCIVDLLS-----RVGRP 269
GL + E+F M + G ++P C + + R+GR
Sbjct: 128 GLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQ 187
Query: 270 EEAYDFITNMKIAPDHIMLGSLLSA-CKIHGKLQLGE-QIAKRLLD-CRSADSGTYVLLS 326
AY I +H L A C I + G+ +A+ + D + + ++ L
Sbjct: 188 IHAY-------ILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLM 240
Query: 327 NAYASSGKWKEAVQIRAKMKEAGVQKE 353
Y G+ KEA+++ +M+ G+Q +
Sbjct: 241 TGYGMHGRGKEALEVFDEMRRVGLQPD 267
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/432 (47%), Positives = 294/432 (68%), Gaps = 5/432 (1%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+I+ Y + G VE A E+F + KD + W +I G AL LF+EM R PN
Sbjct: 263 LIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPN 322
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGG---ALINMYSRCGDIDKALQ 172
+VT++ +L AC+ LGA+++GRWIH Y+ K + V +LI+MY++CGDID A Q
Sbjct: 323 DVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQ 382
Query: 173 VFEE-MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
VF+ M R ++T+N++I+G AMHGR+ A ++F M GI P +TFVG+L+ACSH G
Sbjct: 383 VFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSG 442
Query: 232 LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSL 291
++DLG IF+SMTR Y I P++EHYGC++DLL G +EA + I M + PD ++ SL
Sbjct: 443 MLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSL 502
Query: 292 LSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
L ACKIHG L+LGE AK+L+ +SG+YVLLSN YA++G+W E +IRA + + G++
Sbjct: 503 LKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMK 562
Query: 352 KE-PGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIED 410
K+ PGCSSIE+++ +HEFI+GD HPQ +IY ++E++ +++ G+ P T VL ++E+
Sbjct: 563 KKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEE 622
Query: 411 WEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRD 470
+E AL HSE+LAI +GLISTKP T + ++KNLRVC +CH KLI+ I KR+II RD
Sbjct: 623 EWREGALRHHSEKLAIAFGLISTKPGTKLTIMKNLRVCKNCHEATKLISKIYKREIIARD 682
Query: 471 RNRFHHFENGTC 482
R RF HF +G C
Sbjct: 683 RTRFXHFRDGVC 694
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/349 (33%), Positives = 180/349 (51%), Gaps = 39/349 (11%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG++IHG VLKLG + L+ +Y + G +DA ++FD + DVV+ T +I Y
Sbjct: 107 EGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFD-ISSHRDVVSYTALIAGY 165
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR-DNVRPNEVTI 119
V G +E+A ++F + KD V W AMI G V G AL+LF+EM NVRP+E T+
Sbjct: 166 VSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTM 225
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V V+SAC+Q ++ELGR +HS++ H N + ALI++YS+ G+++ A ++F+ +
Sbjct: 226 VTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWN 285
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+DV ++N+LI G EA+ +F+EM+ G P VT + +L AC+H G +D+G I
Sbjct: 286 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 345
Query: 240 FQSMTR------------------------DYGIEPQI----------EHYGCIVDLLSR 265
+ + D Q+ + ++ +
Sbjct: 346 HVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAM 405
Query: 266 VGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
GR A+D + M+ I PD I LLSAC G L LG I + +
Sbjct: 406 HGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSM 454
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 161/409 (39%), Gaps = 100/409 (24%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
R IH Q++K GL + KL+E F FD P
Sbjct: 5 RXIHAQMIKTGLHNTNYALSKLLE-------FCVVSPHFDGFPY---------------- 41
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
A VF ++ + + W M G + + AL L+ M + P+ T +
Sbjct: 42 ------AISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFL 95
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L +C++ + G+ IH ++ K DL+ V +LI+MY++ G ++ A +VF+ RDV
Sbjct: 96 LKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDV 155
Query: 183 TTYNSLIAGLA--------------MHGRSI-----------------EAVEMFRE-MIN 210
+Y +LIAG + G+ + EA+E+F+E M+
Sbjct: 156 VSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMM 215
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
+RP + T V V++AC+ ++LG + S D+G ++ ++DL S+ G E
Sbjct: 216 TNVRPDESTMVTVVSACAQSDSIELGRHV-HSWINDHGFASNLKIVNALIDLYSKFGEVE 274
Query: 271 EA---YDFITNMKI-------------------------------APDHIMLGSLLSACK 296
A +D + N + P+ + + S+L AC
Sbjct: 275 TACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACA 334
Query: 297 IHGKLQLGE----QIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQI 341
G + +G I K+L + S L + YA G A Q+
Sbjct: 335 HLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQV 383
>gi|357498701|ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494654|gb|AES75857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1182
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/490 (43%), Positives = 310/490 (63%), Gaps = 4/490 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG ++ +K+GL N L+ ++GK G +DA +FD + D + MI Y
Sbjct: 296 EGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVD-RDFYSWNTMIGAY 354
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V G + A E+F + +D V W+ +I G V+ G ALD F +M + V+PNE T+V
Sbjct: 355 VGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVKPNEYTMV 414
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
L+ACS L AL+ G+WIH Y+ + I +N + +LI+MY++CG+ID A VF E K +
Sbjct: 415 SALAACSNLVALDQGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSASSVFHEHKVK 474
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
R V +N++I G AMHG+ EA+ +F +M + + P KVTF+ +LNACSHG +V G
Sbjct: 475 RKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLNACSHGYMVKEGKSY 534
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F+ M DYGI P+IEHYGC+VDLLSR G +++ + I +M +APD + G+LL+AC+I+
Sbjct: 535 FELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEEMILSMPMAPDVAIWGALLNACRIYK 594
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK-EAGVQKEPGCSS 358
++ G +I + + + G VLL N Y++SG+W EA +R K + + +K PG SS
Sbjct: 595 DMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTSGRWNEARMVREKNEINSDRKKIPGFSS 654
Query: 359 IEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE-KEWAL 417
IE+N HEF++GD HPQ +IY + E+ +K+ GY P VL D +D E KE AL
Sbjct: 655 IELNGVFHEFLVGDRSHPQSREIYSFLDEMISKLKIAGYVPELGEVLLDFDDEEDKETAL 714
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
++HSE+LAI +GL++T P T IR+VKNLRVC DCH K I+ + R IIVRDR R+HHF
Sbjct: 715 SVHSEKLAIAFGLMNTAPGTPIRIVKNLRVCGDCHQATKFISKVYDRVIIVRDRMRYHHF 774
Query: 478 ENGTCSCGDY 487
++G CSC DY
Sbjct: 775 KDGICSCKDY 784
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 126/294 (42%), Gaps = 35/294 (11%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDG-LVRNGEMARALDLFREMQRDN-VRPNEVTIVCVLSAC 126
A ++F ++ D + MI + ++ +FR + RD+ PN + V AC
Sbjct: 229 AHKLFDQIPQPDLFIYNTMIKSHSMSPHSYLDSIAVFRSLIRDSGYFPNRYSFVFAFGAC 288
Query: 127 SQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV------------- 173
+ G + ++ K +D N V ALI M+ + G ++ A V
Sbjct: 289 GNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVDRDFYSWN 348
Query: 174 ------------------FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRP 215
F+EM ERDV +++++IAG G +EA++ F +M+ ++P
Sbjct: 349 TMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVKP 408
Query: 216 TKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDF 275
+ T V L ACS+ +D G I + RD I+ ++D+ ++ G + A
Sbjct: 409 NEYTMVSALAACSNLVALDQGKWIHVYIRRD-NIKMNDRLLASLIDMYAKCGEIDSASSV 467
Query: 276 ITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL-LDCRSADSGTYVLLSNA 328
K+ +++ +HGK + + +++ ++ S + T++ L NA
Sbjct: 468 FHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLNA 521
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/440 (45%), Positives = 287/440 (65%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV T ++ Y + G +++A VF R+KV+D V W MI +G A DLF +MQ
Sbjct: 264 DVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQ 323
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ +P+ + + +L+AC+ GALE + IH + ++++ VG AL++MYS+ G ID
Sbjct: 324 TEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSID 383
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A VF+ MK R+V ++N++I+GLA HG +A+E+FR M G++P +VTFV VL+ACS
Sbjct: 384 DARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACS 443
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLVD G + +MT+ YGIEP + H C+VDLL R GR EA FI NM + PD
Sbjct: 444 HAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATW 503
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
G+LL +C+ +G ++LGE +AK L ++ TYVLLSN YA +GKW +R M+E
Sbjct: 504 GALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMMRER 563
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
G++KEPG S IEV+N+IH+F++ D HP+ ++I + ++ + +K EGY P T +VL +
Sbjct: 564 GIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIEKIKAEGYIPDTRLVLKNK 623
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
+KE + HSE+LAI YGL+ T P IRV KNLRVC DCH KLI+ + R+IIV
Sbjct: 624 NMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVFKNLRVCTDCHGATKLISKVEGREIIV 683
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD NRFHHF++G CSCGDYW
Sbjct: 684 RDANRFHHFKDGVCSCGDYW 703
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 168/333 (50%), Gaps = 35/333 (10%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+E+H + GL S+ L+ +YGKCG +A ++FD + +D+++ TVMI Y
Sbjct: 148 GKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMN-HDIISWTVMIGAYA 206
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G NG+ A L +M+++ +PN +T V
Sbjct: 207 QSG-----------------------------NGK--EAYRLMLQMEQEGFKPNAITYVS 235
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+AC+ GAL+ + +H + ++L+ VG AL+ MY++ G ID A VF+ MK RD
Sbjct: 236 ILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRD 295
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++N +I A HGR EA ++F +M +G +P + F+ +LNAC+ G ++ +I +
Sbjct: 296 VVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHR 355
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
D G+E + +V + S+ G ++A MK+ + + +++S HG
Sbjct: 356 H-ALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKV-RNVVSWNAMISGLAQHGLG 413
Query: 302 QLGEQIAKRLL-DCRSADSGTYVLLSNAYASSG 333
Q ++ +R+ D T+V + +A + +G
Sbjct: 414 QDALEVFRRMTAHGVKPDRVTFVAVLSACSHAG 446
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 171/362 (47%), Gaps = 40/362 (11%)
Query: 25 VELYGKCGEFKDAM---QLFDEMPECNDVVASTVMIN---CYVEHGLVENAFEVFSRVKV 78
VE+ +C + KD M Q+ D + + + VM N Y+E G ++ A VF +
Sbjct: 32 VEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDALVK 91
Query: 79 KDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWI 138
K W AMI G V + A+ LFREM + V+PN T + +L AC+ L AL+ G+ +
Sbjct: 92 KSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEV 151
Query: 139 HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRS 198
H+ + ++ + VG AL+ MY +CG I++A ++F+ + D+ ++ +I A G
Sbjct: 152 HACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNG 211
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNAC-SHGGL----------VDLGFE----IFQSM 243
EA + +M +G +P +T+V +LNAC S G L +D G E + ++
Sbjct: 212 KEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTAL 271
Query: 244 TRDYGIEPQIE---------------HYGCIVDLLSRVGRPEEAYDFITNMKI---APDH 285
+ Y I+ + ++ + GR EAYD M+ PD
Sbjct: 272 VQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDA 331
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRLLDC-RSADSGTYVLLSNAYASSGKWKEAVQIRAK 344
IM S+L+AC G L+ ++I + LD D L + Y+ SG +A + +
Sbjct: 332 IMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDR 391
Query: 345 MK 346
MK
Sbjct: 392 MK 393
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/487 (41%), Positives = 294/487 (60%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIHG +++ GL S+ L ++YGKCG
Sbjct: 222 GKEIHGYIMRTGLDSDEVVWSALSDMYGKCGS---------------------------- 253
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+E A +F ++ +D V WTAMID ++G DLF ++ R +RPNE T
Sbjct: 254 ----IEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSG 309
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL+AC+ + ELG+ +H YM + D AL++MYS+CG++ A +VF+E + D
Sbjct: 310 VLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPD 369
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++ SLIAG A +G+ EA+ F ++ G +P +TFVGVL+AC+H GLVD G + F
Sbjct: 370 LFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFH 429
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
S+ YG+ +HY CI+DLL+R G+ +EA + I+ M + PD + SLL C+IHG L
Sbjct: 430 SIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNL 489
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+L ++ A+ L + + TYV L+N YA++G W E +IR M + GV K+PG S I +
Sbjct: 490 KLAQRAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAI 549
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
++H F++GD HP+ ++I + + +L + +K EG+ P T VLHD+ED +KE L+ HS
Sbjct: 550 KRDVHVFLVGDDSHPKSKEINEFLGKLSKRMKEEGFVPDTNFVLHDVEDEQKEQNLSYHS 609
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ +G+IST T I+V KNLR C DCH+ IK I+ IT RKIIVRD NRFH FE+G
Sbjct: 610 EKLAVAFGIISTPEGTPIKVFKNLRTCVDCHTAIKFISKITNRKIIVRDSNRFHFFEDGH 669
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 670 CSCRDYW 676
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 227/454 (50%), Gaps = 55/454 (12%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+++H + G +L+E+Y KC D+ +LFDEMPE D+ + ++I+ Y
Sbjct: 88 QGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPE-RDLCSWNILISGY 146
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR-DNVRPNEVTI 119
+ GL++ A +F ++ +D WTAMI G VR+ AL+LFR M+R DN + N+ T+
Sbjct: 147 AKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTV 206
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
L+A + + L +G+ IH Y+ + +D + +V AL +MY +CG I++A +F++M +
Sbjct: 207 SSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVD 266
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS----------- 228
RD+ T+ ++I GR E ++F +++ GIRP + TF GVLNAC+
Sbjct: 267 RDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKV 326
Query: 229 HGGLVDLGFEIFQ-----------------SMTRDYGIEPQIEHYG--CIVDLLSRVGRP 269
HG + +GF+ F S R + PQ + + ++ ++ G+P
Sbjct: 327 HGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQP 386
Query: 270 EEA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLG----EQIAKRLLDCRSADSGTY 322
+EA ++ + PDHI +LSAC G + G I ++ +AD Y
Sbjct: 387 DEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADH--Y 444
Query: 323 VLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIY 382
+ + A SG++ EA I +KM S++ + + +LG R ++
Sbjct: 445 ACIIDLLARSGQFDEAENIISKM------------SMKPDKFLWASLLGGCRIHGNLKLA 492
Query: 383 KKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWA 416
++ E + ++E +P+T V L +I W+
Sbjct: 493 QRAAE--ALFEIEPENPATYVTLANIYATAGMWS 524
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 196/435 (45%), Positives = 275/435 (63%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
T + Y +E+A +F K W AMI G +NG +A+ LF+EMQ+ VR
Sbjct: 347 TALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVR 406
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
PN VT+ +LSAC+QLGAL LG+W+H + + + N V ALI+MY++CG I +A ++
Sbjct: 407 PNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRL 466
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV 233
F M E++ T+N++I+G +HG EA+ +F EM++ + PT VTF+ VL ACSH GLV
Sbjct: 467 FSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLV 526
Query: 234 DLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLS 293
G EIF+SM D+G EP EHY C+VDLL R G ++A DFI M + P + G+LL
Sbjct: 527 REGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLG 586
Query: 294 ACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
AC IH L + +L + + G YVLLSN Y++ + EA +R +K + K
Sbjct: 587 ACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKT 646
Query: 354 PGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEK 413
PGC+ IEV N +H F GD HPQ IY +++L ++ G+ T LHD+E+ EK
Sbjct: 647 PGCTLIEVANTLHIFTSGDQSHPQATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEK 706
Query: 414 EWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNR 473
E + +HSE+LAI +GLI+++P T IR++KNLRVC DCH+ K I+ IT+R I+VRD NR
Sbjct: 707 ELMVKVHSEKLAIAFGLITSEPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDANR 766
Query: 474 FHHFENGTCSCGDYW 488
FHHF++G CSCGDYW
Sbjct: 767 FHHFKDGICSCGDYW 781
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 158/356 (44%), Gaps = 38/356 (10%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G I +K+G S+ L LY KCGE
Sbjct: 226 GMGIQCLAMKVGFHSHAYVITGLACLYSKCGE---------------------------- 257
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+E A +F ++ D V + AMI G N E ++ LF+E+ + N +IV
Sbjct: 258 ----IETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVG 313
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
++ G L L R IH + K + N V AL +YSR +I+ A +F+E E+
Sbjct: 314 LIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKS 373
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++N++I+G A +G + +A+ +F+EM +RP VT +L+AC+ G + LG +
Sbjct: 374 LASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHD 433
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+ R+ E I ++D+ ++ G EA + M + + +++S +HG
Sbjct: 434 LINRE-SFESNIFVSTALIDMYAKCGSITEAQRLFSMMP-EKNAVTWNAMISGYGLHGYG 491
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASS--GKWKEAVQI-RAKMKEAGVQKEP 354
+ +L R + +G LS YA S G +E +I R+ + + G + P
Sbjct: 492 HEALNLFNEMLHSRVSPTGV-TFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLP 546
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 151/335 (45%), Gaps = 36/335 (10%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D+ + ++ CY + V A +VF + +DTV W M+ GLV+N A+ +F +M
Sbjct: 139 SDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDM 198
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ + + T+ VL ++L L LG I K + V L +YS+CG+I
Sbjct: 199 VKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEI 258
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGV---- 223
+ A +F ++ + D+ +YN++I+G + + +V +F+E++ G + + VG+
Sbjct: 259 ETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVF 318
Query: 224 -------LNACSHGGLVDLGF-----------EIFQSMTR--------DYGIEPQIEHYG 257
L C HG G ++ + D E + +
Sbjct: 319 FPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWN 378
Query: 258 CIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC 314
++ ++ G E+A M+ + P+ + + S+LSAC G L LG+ + L++
Sbjct: 379 AMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWV-HDLINR 437
Query: 315 RSADSGTYV--LLSNAYASSGKWKEAVQIRAKMKE 347
S +S +V L + YA G EA ++ + M E
Sbjct: 438 ESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPE 472
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 80/196 (40%), Gaps = 34/196 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H + + SN L+++Y KCG +A +LF MPE
Sbjct: 428 GKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPE--------------- 472
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K+ V W AMI G +G AL+LF EM V P VT +
Sbjct: 473 -----------------KNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLS 515
Query: 122 VLSACSQLGALELGRWI-HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VL ACS G + G I S + H + ++++ R G++DKAL +M E
Sbjct: 516 VLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVE 575
Query: 180 RDVTTYNSLIAGLAMH 195
+ +L+ +H
Sbjct: 576 PGPPVWGALLGACMIH 591
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 113/266 (42%), Gaps = 6/266 (2%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
ND+V T + + ++ A +FS + D + +I N + A+ L+ +
Sbjct: 40 NDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHL 99
Query: 108 QRDN-VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
++ + P+ T V+S S LG L HS + DL VG A++ Y +
Sbjct: 100 RKSTPLEPDNFTYAFVISGASSLGLGLLLH-AHSIVAGFGSDL--FVGSAIVACYFKFSR 156
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+ A +VF+ M ERD +N++++GL + EA+ +F +M+ GI T VL
Sbjct: 157 VAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPG 216
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
+ + LG I Q + G + L S+ G E A + PD +
Sbjct: 217 VAELQDLALGMGI-QCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIG-QPDLV 274
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLL 312
+++S + + + ++ K LL
Sbjct: 275 SYNAMISGYTCNNETESSVRLFKELL 300
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/489 (41%), Positives = 307/489 (62%), Gaps = 3/489 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR I + G + ++++Y KCG DA LF++M E D+V+ T M++ +
Sbjct: 293 GRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSE-KDIVSWTTMLDGHA 351
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ-RDNVRPNEVTIV 120
+ G + A +F + K T W A+I +NG+ AL LF EMQ + +P+EVT++
Sbjct: 352 KLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLI 411
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
C L A +QLGA++ G WIH Y+ KH I+LN + +L++MY++CG+++KA++VF ++ +
Sbjct: 412 CALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERK 471
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++++I LAM+G+ A+++F M+ I+P VTF +L AC+H GLV+ G ++F
Sbjct: 472 DVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLF 531
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ M YGI PQI+HY C+VD+ R G E+A FI M I P + G+LL AC HG
Sbjct: 532 EQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGN 591
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++L E + LL+ + G +VLLSN YA +G W++ +R M+++ V+KEP CSSI+
Sbjct: 592 VELAELAYQNLLELEPCNHGAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSSID 651
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH-DIEDWEKEWALAI 419
VN +HEF++GD HP ++IY K+ E+ + K GY P +L ED E +L +
Sbjct: 652 VNGIVHEFLVGDNSHPFSQKIYSKLDEISEKFKPIGYKPDMSNLLQLSEEDNLMEQSLNV 711
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GLIST IR+VKN+R+C DCH+ KL++ + R I++RDR RFHHF
Sbjct: 712 HSEKLAIAFGLISTASSQPIRIVKNIRICGDCHAFAKLVSQLYDRDILLRDRYRFHHFRG 771
Query: 480 GTCSCGDYW 488
G CSC DYW
Sbjct: 772 GKCSCLDYW 780
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 151/334 (45%), Gaps = 75/334 (22%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D+ +IN Y G + A VF+ + KD V W AMI+ G +AL LF+EM
Sbjct: 206 SDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEM 265
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ +V+PN +T+V VLSAC++ LE GRWI SY+ + + I+ A+++MY +CG I
Sbjct: 266 EMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCI 325
Query: 168 DKALQVFEEMKERDVTT-------------------------------YNSLIAGLAMHG 196
+ A +F +M E+D+ + +N+LI+ +G
Sbjct: 326 NDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNG 385
Query: 197 RSIEAVEMFREM-INQGIRPTKVTFVGVLNACSHGGLVDLG------------------- 236
+ A+ +F EM +++ +P +VT + L A + G +D G
Sbjct: 386 KPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLA 445
Query: 237 ----------------FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM- 279
E+F ++ R + + ++ L+ G+ + A D ++M
Sbjct: 446 TSLLDMYAKCGNLNKAMEVFHAVERK-----DVYVWSAMIGALAMYGQGKAALDLFSSML 500
Query: 280 --KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
I P+ + ++L AC G + GEQ+ +++
Sbjct: 501 EAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQM 534
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 4/213 (1%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTIVCVLSACS 127
A VF+++ + CW +I G + + ++ +F M + PN+ T + A S
Sbjct: 125 AKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAAS 184
Query: 128 QLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNS 187
+L L LG +H + K + + + +LIN Y G D A +VF M +DV ++N+
Sbjct: 185 RLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNA 244
Query: 188 LIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF-EIFQSMTRD 246
+I A+ G +A+ +F+EM + ++P +T V VL+AC+ +DL F S +
Sbjct: 245 MINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKK--IDLEFGRWICSYIEN 302
Query: 247 YGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM 279
G + ++D+ + G +A D M
Sbjct: 303 NGFTEHLILNNAMLDMYVKCGCINDAKDLFNKM 335
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/491 (40%), Positives = 305/491 (62%), Gaps = 5/491 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLK----LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMI 57
G+ +HGQ+++L L LV Y KCG A ++FD M DVV+ ++
Sbjct: 313 GKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNM-TLKDVVSWNTIL 371
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ YVE ++ A EVF + K+ + W M+ G V G AL LF +M+ +NV+P +
Sbjct: 372 SGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDY 431
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T ++AC +LGAL+ G+ +H ++ + + ++ G ALI MY+RCG + +A +F M
Sbjct: 432 TYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVM 491
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
D ++N++I+ L HG EA+E+F M+ +GI P +++F+ VL AC+H GLVD GF
Sbjct: 492 PNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGF 551
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F+SM RD+GI P +HY ++DLL R GR EA D I M P + ++LS C+
Sbjct: 552 RYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRT 611
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
G ++LG A +L GTY+LLSN Y+++G W +A ++R M++ GV+KEPGCS
Sbjct: 612 SGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCS 671
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IE N++H F++GD +HP+ ++YK ++ + ++ GY P T+VVLHD+E +KE L
Sbjct: 672 WIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGAKMRKLGYVPDTKVVLHDMEPHQKEHIL 731
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSERLA+ +GL++ P T+ V+KNLR+C+DCH+ I ++ R+I+VRD RFHHF
Sbjct: 732 FAHSERLAVGFGLLNLPPGATVTVLKNLRICDDCHAAIMFMSKAVGREIVVRDVRRFHHF 791
Query: 478 ENGTCSCGDYW 488
++G CSCG+YW
Sbjct: 792 KDGECSCGNYW 802
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 164/374 (43%), Gaps = 76/374 (20%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGE---FKDAMQLFDEMPECNDVVASTVMINCY 60
++H VLK G S LV LY KC +DA ++ DEMP +D+ +T+++ Y
Sbjct: 180 QLHCSVLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVG-Y 238
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V G V A VF V K V W AMI G V +G A +LFR M + V +E T
Sbjct: 239 VRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFT 298
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHI------VGGALINMYSRCGDI------- 167
VLSAC+ +G G+ +H + R+ N + V AL+ YS+CG+I
Sbjct: 299 SVLSACANVGLFAHGKSVHGQI--IRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIF 356
Query: 168 ------------------------DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
DKA++VFEEM ++ ++ +++G G + +A++
Sbjct: 357 DNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALK 416
Query: 204 MFREMINQGIRPTKVTFVGVLNACS-----------HGGLVDLGFEIFQSMTRD------ 246
+F +M ++ ++P T+ G + AC HG +V LGFE S
Sbjct: 417 LFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYA 476
Query: 247 -----------YGIEPQIE--HYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGS 290
+ + P I+ + ++ L + G EA + M I PD I +
Sbjct: 477 RCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLT 536
Query: 291 LLSACKIHGKLQLG 304
+L+AC G + G
Sbjct: 537 VLTACNHSGLVDEG 550
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 173/401 (43%), Gaps = 64/401 (15%)
Query: 3 REIHGQVLKLGL---RSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDV--VASTVMI 57
R +H ++L L + L+L+ LY + A LF C D V++T ++
Sbjct: 41 RCLHARLLTSALLHAPPHPHLTLRLIHLYTLSRDLPAAATLF-----CADPCPVSATSLV 95
Query: 58 NCYVEHGLVENAFEVFSRVKV--KDTVCWTAMIDGLVRNGEMARALDLFRE-MQRDNVRP 114
Y + A F V +DTV A+I R A A+ +FR + ++RP
Sbjct: 96 AAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRP 155
Query: 115 NEVTIVCVLSA-----------CSQL----------GALEL-GRWIHSYM---------- 142
++ + +LSA C+QL GAL + + YM
Sbjct: 156 DDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEATRD 215
Query: 143 GKHRID----LNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRS 198
+ +D + + ++ Y R GD+ A VFEE+ + +N++I+G G +
Sbjct: 216 ARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMA 275
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR---DYGIEPQIEH 255
+EA E+FR M+ + + + TF VL+AC++ GL G + + R ++ E +
Sbjct: 276 VEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPV 335
Query: 256 YGCIVDLLSRVGRPEEAYDFITNMK----IAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
+V S+ G A NM ++ + I+ G + S+C + +++ E++ +
Sbjct: 336 NNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSC-LDKAVEVFEEMPYK- 393
Query: 312 LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
+ +++++ + Y G ++A+++ KM+ V+
Sbjct: 394 ------NELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKP 428
>gi|357121594|ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 544
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/515 (41%), Positives = 303/515 (58%), Gaps = 34/515 (6%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDV-------------- 50
+H KLG T ++ Y G DA ++FD MP + V
Sbjct: 33 LHAVCTKLGFLLCTRTNNAFIQGYCSAGRVTDARRVFDGMPRRDTVSFNSMIHGYAVSGD 92
Query: 51 ----------------VASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRN 94
V T M+ + G VE+A VF + +D V W AMI G V N
Sbjct: 93 VGSAQRLFERVLAPTPVTWTSMVAGFCRAGDVESARRVFEEMPERDLVSWNAMISGCVGN 152
Query: 95 GEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG 154
AL LFR M + PN T+V VLSAC+ GALE G+W+H ++ K R+ + +G
Sbjct: 153 RLPVEALCLFRWMMEEGFVPNRGTVVSVLSACTGAGALETGKWVHVFVEKKRLRWDEFLG 212
Query: 155 GALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM-INQGI 213
AL++MY++CG ++ AL+VF ++ R+ T+N++I GLAM+G S +A++MFR+M +N +
Sbjct: 213 TALVDMYAKCGAVELALEVFTGLRARNTCTWNAMINGLAMNGYSAKALDMFRQMELNGTV 272
Query: 214 RPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAY 273
P +VTFVGVL ACSH G VD G E F ++ + YG+E +EHY C+VDLL+R G +EA+
Sbjct: 273 APDEVTFVGVLLACSHAGFVDAGKEHFYTIPQKYGVELILEHYACMVDLLARSGHLQEAH 332
Query: 274 DFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSG 333
IT M + PD ++ +LL C++H +++ E + + + SG +VLLSN YA+ G
Sbjct: 333 KLITEMPMKPDVVVWRALLGGCRLHKNVKMAENVISEM---EATCSGDHVLLSNLYAAVG 389
Query: 334 KWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVK 393
+W +R M+ G++K PGCSS+E++ IHEFI GD HP + I+ K+ E+ ++
Sbjct: 390 RWNGVEDVRRTMRSKGIEKIPGCSSVEMDGSIHEFISGDKSHPSYDDIHAKLIEIGGRMQ 449
Query: 394 LEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHS 453
GY T V +DIED EKE AL HSE+LAI +GLI P TIR+VKNLR C DCHS
Sbjct: 450 QHGYVTETAEVFYDIEDEEKEQALGYHSEKLAIAFGLIGGPPEATIRIVKNLRFCTDCHS 509
Query: 454 MIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
KL++ I R+I+VRDR RFHHF G CSC D+W
Sbjct: 510 FAKLVSKIYHREIVVRDRARFHHFRGGACSCNDFW 544
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/441 (45%), Positives = 284/441 (64%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
ND+ +++ Y + G +E A VF ++ V+D V WT+MI G NG + L F M
Sbjct: 851 NDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLM 910
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ V PN V+I+ VL AC LGAL G W HSY+ + + + +V A+++MYS+CG +
Sbjct: 911 RSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSL 970
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
D A +F+E +D+ ++++IA +HG +A+++F +M+ G+RP+ VTF VL+AC
Sbjct: 971 DLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSAC 1030
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SH GL++ G FQ MT ++ I ++ +Y C+VDLL R G+ EA D I NM + PD +
Sbjct: 1031 SHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASI 1090
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
GSLL AC+IH L L E+IA L +G +VLLSN YA+ +W E ++R M
Sbjct: 1091 WGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMAR 1150
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
G K G S +E +N++H+F +GD HPQ E++Y K++EL +K GY P T+ VLHD
Sbjct: 1151 RGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHD 1210
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
IE+ KE AL+ HSERLAI +GLI+T P TT+R+ KNLR+C DCH+ IKLI+ I R I+
Sbjct: 1211 IEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVIL 1270
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
VRD +RFH FE+G CSCGDYW
Sbjct: 1271 VRDMHRFHRFEDGVCSCGDYW 1291
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 138/370 (37%), Positives = 225/370 (60%), Gaps = 5/370 (1%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D ST +I+ Y++ + A ++F R+ KD V W A++ G +NG +++ +FR M
Sbjct: 341 DFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNML 400
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
D ++P+ V +V +L+A S+LG + +H Y+ + + N VG +LI +YS+CG +
Sbjct: 401 SDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLG 460
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI-NQGIRPTKVTFVGVLNAC 227
A+++F+ M RDV ++S+IA +HGR EA+E+F +M+ N +RP VTF+ +L+AC
Sbjct: 461 DAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSAC 520
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SH GLV+ G +IF M DY + P EH+G +VDLL R+G+ +A D I M I +
Sbjct: 521 SHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHV 580
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
G+LL AC+IH +++GE AK L + +G Y+LLSN YA GKW ++R ++KE
Sbjct: 581 WGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKE 640
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
G++K G S +EV +H F+ D HP ++IY+ +++L+ + E Y P + +LHD
Sbjct: 641 RGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLRKLEAQMGKEVYIPDLDFLLHD 700
Query: 408 ----IEDWEK 413
++ W++
Sbjct: 701 TGAVLQFWQR 710
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 155/301 (51%), Gaps = 8/301 (2%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D+ ++N Y + G + A +FS++ KD + W+ MI N AL+LF EM
Sbjct: 240 DLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMI 299
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
PN VT+V L AC+ LE G+ IH +L+ V ALI+MY +C D
Sbjct: 300 EKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPD 359
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+A+ +F+ + ++DV ++ +L++G A +G + +++ +FR M++ GI+P V V +L A S
Sbjct: 360 EAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASS 419
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
G+ + + R G + +++L S+ G +A M I D ++
Sbjct: 420 ELGIFQQALCLHGYVVRS-GFNSNVFVGASLIELYSKCGSLGDAVKLFKGM-IVRDVVIW 477
Query: 289 GSLLSACKIHGK----LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAK 344
S+++A IHG+ L++ +Q+ K ++ T++ + +A + +G +E ++I +
Sbjct: 478 SSMIAAYGIHGRGGEALEIFDQMVKN--STVRPNNVTFLSILSACSHAGLVEEGLKIFDR 535
Query: 345 M 345
M
Sbjct: 536 M 536
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 156/318 (49%), Gaps = 6/318 (1%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D+ + ++ Y + G + A +VF + DTV WT+M+ G +N + AL LF +M
Sbjct: 137 SDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQM 196
Query: 108 -QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
D V + VT+V V+SAC+QL ++ G +H + + D + + +L+N+Y++ G
Sbjct: 197 VMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGC 256
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
A +F +M E+DV +++++IA A + + EA+ +F EMI + P VT V L A
Sbjct: 257 EKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQA 316
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
C+ ++ G +I + G E ++D+ + P+EA D + D +
Sbjct: 317 CAVSRNLEEGKKIHKIAVWK-GFELDFSVSTALIDMYMKCSCPDEAVDLFQRLP-KKDVV 374
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLL-DCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
+LLS +G + + +L D D+ V + A + G +++A+ + +
Sbjct: 375 SWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYV 434
Query: 346 KEAGVQKE--PGCSSIEV 361
+G G S IE+
Sbjct: 435 VRSGFNSNVFVGASLIEL 452
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
++H QV K G+ + KL LY KC + A ++FDE P N
Sbjct: 22 QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPN--------------- 66
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ-RDNVRPNEVTIVCV 122
W + + R + L LF M P+ TI
Sbjct: 67 -----------------VHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIA 109
Query: 123 LSACSQLGALELGRWIHSYMGKH-RIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
L AC+ L LELG+ IH + K+ I + VG AL+ +YS+CG + +AL+VFEE + D
Sbjct: 110 LKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPD 169
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSH 229
+ S++ G + EA+ +F +M+ + VT V V++AC+
Sbjct: 170 TVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQ 218
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 84/179 (46%), Gaps = 42/179 (23%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
+HG V++ G SN L+ELY KCG DA++LF M DVV + MI Y HG
Sbjct: 430 LHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMI-VRDVVIWSSMIAAYGIHG 488
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN-VRPNEVTIVCVL 123
R GE AL++F +M +++ VRPN VT + +L
Sbjct: 489 ----------------------------RGGE---ALEIFDQMVKNSTVRPNNVTFLSIL 517
Query: 124 SACSQLGALELG-----RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
SACS G +E G R +H Y + R D H G ++++ R G + KA+ + M
Sbjct: 518 SACSHAGLVEEGLKIFDRMVHDY--QLRPDSEHF--GIMVDLLGRIGQLGKAMDIINRM 572
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 34/197 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G H V++ G + ++++Y KCG A LFDE D+V + MI Y
Sbjct: 937 KGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAG-KDLVCWSAMIASY 995
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG +G +A+DLF +M + VRP+ VT
Sbjct: 996 GIHG-----------------------------HGR--KAIDLFDQMVKAGVRPSHVTFT 1024
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGA-LINMYSRCGDIDKALQVFEEMK- 178
CVLSACS G LE G+ M + + + A ++++ R G + +A+ + E M
Sbjct: 1025 CVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPV 1084
Query: 179 ERDVTTYNSLIAGLAMH 195
E D + + SL+ +H
Sbjct: 1085 EPDASIWGSLLGACRIH 1101
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 160 MYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVT 219
MY ID A VFE++ +N +I G A GR + ++E++ +M+ +G++P K
Sbjct: 761 MYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFA 820
Query: 220 FVGVLNACSHGGLVDL 235
F L +C+ GL DL
Sbjct: 821 FPFALKSCA--GLSDL 834
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 8/198 (4%)
Query: 138 IHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR 197
+HS + K I + L ++Y++C + A +VF+E +V +NS + +
Sbjct: 23 LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQ 82
Query: 198 SIEAVEMFREMI-NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHY 256
E + +F MI G P T L AC+ +++LG I ++ I +
Sbjct: 83 WEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVG 142
Query: 257 GCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG----KLQLGEQIAKRLL 312
+V+L S+ G+ EA + PD ++ S+++ + + L L Q+ ++
Sbjct: 143 SALVELYSKCGQMGEALKVFEEFQ-RPDTVLWTSMVTGYQQNNDPEEALALFSQMV--MM 199
Query: 313 DCRSADSGTYVLLSNAYA 330
DC D T V + +A A
Sbjct: 200 DCVVLDPVTLVSVVSACA 217
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/489 (42%), Positives = 300/489 (61%), Gaps = 33/489 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG +H +KLGL N L+ +Y +C + A +FDEM + C
Sbjct: 148 EGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQ-----------PCI 196
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V + A+I G R+ + AL LFRE+Q N+ P +VT++
Sbjct: 197 VS---------------------YNAIITGYARSSQPNEALSLFRELQASNIEPTDVTML 235
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+ +C+ LGAL+LG+WIH Y+ K D V ALI+M+++CG + A+ +FE M+ R
Sbjct: 236 SVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVR 295
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++++I A HG ++A+ MF EM +G+RP ++TF+G+L ACSH GLV+ G F
Sbjct: 296 DTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYF 355
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM++ YGI P I+HYGC+VDLL R G +EAY+F+ ++I I+ +LLSAC HG
Sbjct: 356 YSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGN 415
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+++ +++ +R+ + A G YV+LSN YA G+W++ +R MK+ GV K PGCSS+E
Sbjct: 416 VEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVE 475
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH-DIEDWEKEWALAI 419
VNN +HEF GD H ++ + + EL + +KL GY P T +V H D+E+ KE L
Sbjct: 476 VNNVVHEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRY 535
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LA+ +GL++T P TTIRV KNLR+C DCH+ KLI+ I RKI++RD RFH FE+
Sbjct: 536 HSEKLAMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFED 595
Query: 480 GTCSCGDYW 488
G CSCGD+W
Sbjct: 596 GKCSCGDFW 604
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 140/285 (49%), Gaps = 8/285 (2%)
Query: 21 RLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMIN-CYVEH--GLVENAFEVFS 74
+L + L KC + Q+ + N D+ T +IN C + +++A +F
Sbjct: 29 QLHPLSLLSKCTSLNELKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFD 88
Query: 75 RVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALEL 134
++ KD + + M G R+ A LF E+ + P++ T +L AC+ AL
Sbjct: 89 QILDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALRE 148
Query: 135 GRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAM 194
G +H + K ++ N + LINMY+ C D++ A VF+EM++ + +YN++I G A
Sbjct: 149 GMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYAR 208
Query: 195 HGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIE 254
+ EA+ +FRE+ I PT VT + V+ +C+ G +DLG I + + + G + ++
Sbjct: 209 SSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKK-GFDKYVK 267
Query: 255 HYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
++D+ ++ G +A M++ D +++ A HG
Sbjct: 268 VNTALIDMFAKCGSLTDAISIFEGMRVR-DTQAWSAMIVAFATHG 311
>gi|147806246|emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
Length = 558
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/488 (42%), Positives = 300/488 (61%), Gaps = 33/488 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++H + KLG S+ + L+ YG CG
Sbjct: 103 GLDLHSLLFKLGFDSDVYVQNGLIHFYGCCG----------------------------- 133
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR-DNVRPNEVTIV 120
++ A + F + +D V W++MI +NG AL LF+ MQ V+P+EV ++
Sbjct: 134 ---FLDFALKAFEEMPERDLVSWSSMIACFAKNGFGYEALALFQRMQLVGTVKPDEVIVL 190
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+SA S LG LELG+WI ++ ++ ++ +G AL++M+SRCG I+++++VF+EM ER
Sbjct: 191 SVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGER 250
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+V T+ +LI GLA+HGRS EA+ MF EM N G +P VTF GVL ACSHGGLV G+ +F
Sbjct: 251 NVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVF 310
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+S+ +YG+EP EHYGC+VDLL R G EA F+ M I P+ I+ +LL AC H
Sbjct: 311 ESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTLLGACVNHNY 370
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++L E++ +++ + S G YVLLSN Y G+W E +R M+E + K+PGCS I
Sbjct: 371 IELAEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAEKAGVRNSMREKRISKKPGCSLIN 430
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
VN+ IHEF+ GD HPQ E I + + + +K+ GY+P VL DIE+ EKE L H
Sbjct: 431 VNHLIHEFVAGDNNHPQFESIREFLVSMIDSLKVVGYTPDISNVLFDIEEEEKESTLGYH 490
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LA+ + L+ K TIRV+KNLR+C+DCH +K +++ +R+II+RDRNRFHHF G
Sbjct: 491 SEKLAVAFALLCFKDSRTIRVMKNLRICHDCHCFMKYASDVFEREIIIRDRNRFHHFSKG 550
Query: 481 TCSCGDYW 488
+CSC DYW
Sbjct: 551 SCSCRDYW 558
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 121/233 (51%), Gaps = 7/233 (3%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A +F + DT + +I + + +L LF +M V P+ T VL AC++
Sbjct: 41 ARSIFDLIAFPDTFAFNTIIRAHA-DSSPSFSLSLFSKMTMAGVSPDHFTFPFVLKACAR 99
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
L + G +HS + K D + V LI+ Y CG +D AL+ FEEM ERD+ +++S+
Sbjct: 100 L---QTGLDLHSLLFKLGFDSDVYVQNGLIHFYGCCGFLDFALKAFEEMPERDLVSWSSM 156
Query: 189 IAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDY 247
IA A +G EA+ +F+ M G ++P +V + V++A S G ++LG I ++R+
Sbjct: 157 IACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRN- 215
Query: 248 GIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
G+E + +VD+ SR G EE+ M + + +L++ +HG+
Sbjct: 216 GLEFTVSLGTALVDMFSRCGCIEESMRVFDEMG-ERNVLTWTALINGLAVHGR 267
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/516 (42%), Positives = 313/516 (60%), Gaps = 33/516 (6%)
Query: 5 IHGQVLKLGLRS-NRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
+H + LK G + + R LVE Y K G A FDE P DV VM+ YV
Sbjct: 61 LHARALKSGFAAADLFVRTALVEAYAKAGRADLARAAFDEAPR-RDVFLCNVMLAAYVTR 119
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGE--MAR---------------------- 99
G V A VF ++ +D V W MI G NGE +AR
Sbjct: 120 GEVAEARRVFDGMRERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSAYT 179
Query: 100 -------ALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHI 152
AL+L+REM+ V P+ T+V VLSACS +GAL +G +H ++ + ++L+
Sbjct: 180 KGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELDVK 239
Query: 153 VGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG 212
+G ALI+MY++CGDI+ +++VF M +DV T++S+I GLA HG +A+ +F M+++G
Sbjct: 240 LGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEG 299
Query: 213 IRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
++P +VTF+GVL +C+H GLV G + F SM+ +G+ P+++HYGC+VDLL R G EEA
Sbjct: 300 LQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEA 359
Query: 273 YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASS 332
I +M PD ++ +LL AC+I+ +++ E+ +L G YVLLSN YA +
Sbjct: 360 KQLIRDMPFEPDAVIWRALLGACRIYKNVEVAEEAMAKLRVLDPHADGHYVLLSNIYAQA 419
Query: 333 GKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIV 392
W+ ++R ++ +Q+ PG SSIE N IHEFI GD HP+ ++IYK + E+ +
Sbjct: 420 NSWEGVAEMRRTLRRERIQRIPGRSSIEWQNTIHEFISGDRSHPRSKEIYKMLGEMMDRL 479
Query: 393 KLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCH 452
+ GY P T +VL DI++ KE ALA HSE+LA+ +GL++T +T+R+ KNLR C DCH
Sbjct: 480 RQAGYKPMTGLVLQDIDEQSKERALAEHSEKLAVAFGLLTTPAGSTLRITKNLRACEDCH 539
Query: 453 SMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
S IKLIA + +RK+I+RDRNRFHHF G CSC DYW
Sbjct: 540 SAIKLIALLYERKLIIRDRNRFHHFSEGRCSCKDYW 575
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 35/204 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G E+H V G+ + L+++Y KCG+ ++++++F MP DV+ + MI
Sbjct: 222 GAEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMP-VKDVLTWSSMIIGLA 280
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG +A +FSR M + ++PNEVT +
Sbjct: 281 NHGFGHDALSLFSR-------------------------------MLSEGLQPNEVTFIG 309
Query: 122 VLSACSQLGALELGRWIHSYMG-KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VL +C+ LG + G+ S M H + G ++++ R G I++A Q+ +M E
Sbjct: 310 VLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFE 369
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVE 203
D + +L+ ++ +++E E
Sbjct: 370 PDAVIWRALLGACRIY-KNVEVAE 392
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/440 (45%), Positives = 288/440 (65%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D+ +++ Y + G V+ A +VF + ++ WT MI GL ++G A F +M
Sbjct: 658 DLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQML 717
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
R+ + P+ T V +LSAC+ GALE + +H++ + + VG AL++MY++CG ID
Sbjct: 718 REGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSID 777
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A VF++M ERDV ++ +I GLA HGR +EA++ F +M ++G +P ++V VL ACS
Sbjct: 778 DARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACS 837
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLVD G F SMT+DYGIEP +EHY C+VDLL R G EEA FI NM I PD
Sbjct: 838 HAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPW 897
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
G+LL AC +G L++ E AK L + + TYVLLSN YA++GKW++ + +R+ M+
Sbjct: 898 GALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRK 957
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
G++KEPG S IEV+N IH F++GD HP+ ++IY ++ +L + +K +GY P T +VL +
Sbjct: 958 GIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLKAKGYVPDTRLVLRNT 1017
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
+ KE AL HSE+LAI YGL+ T+ IRV KNLRVC+DCH+ K I+ IT R+I+
Sbjct: 1018 DQEHKEQALCSHSEKLAIVYGLMHTQSKDPIRVYKNLRVCSDCHTATKFISKITGREIVA 1077
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD RFHHF++G CSCGDYW
Sbjct: 1078 RDAKRFHHFKDGVCSCGDYW 1097
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 176/385 (45%), Gaps = 45/385 (11%)
Query: 8 QVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEM-PEC------------------- 47
QV L+ N ++ Y + G +DAM+++D+M EC
Sbjct: 174 QVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPV 233
Query: 48 ------------------NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMID 89
+DV T ++N YV+ G +E+A +F ++ ++ + WT MI
Sbjct: 234 NLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIG 293
Query: 90 GLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDL 149
GL G A LF +MQR+ PN T V +L+A + GALE + +HS+ + L
Sbjct: 294 GLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLAL 353
Query: 150 NHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
+ VG AL++MY++ G ID A VF+ M ERD+ ++ +I GLA HGR EA +F +M
Sbjct: 354 DLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQ 413
Query: 210 NQGIRPTKVTFVGVLNACSHGGLVDLGF-EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGR 268
G P T++ +LNA + L + ++ + G + ++ + ++ G
Sbjct: 414 RNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGS 473
Query: 269 PEEA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLL 325
++A +D + + + + M+G L H + Q+ + L DS TY+ L
Sbjct: 474 IDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGL---VPDSTTYLSL 530
Query: 326 SNAYASSGKWKEAVQIRAKMKEAGV 350
N + S+ + ++ E G+
Sbjct: 531 LNTHGSTDALEWVNEVHKHAVETGL 555
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 146/337 (43%), Gaps = 68/337 (20%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
E+H ++ GL S+ + +Y +CG DA LFD
Sbjct: 545 EVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFD--------------------- 583
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
++ V+ W AMI G + AL LF +MQR+ P+ T + +L
Sbjct: 584 -----------KLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINIL 632
Query: 124 SACSQLGALELGRWIHSY-MGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
SA ALE + +HS+ +DL VG AL++ YS+CG++ A QVF++M ER+V
Sbjct: 633 SANVDEEALEWVKEVHSHATDAGLVDLR--VGNALVHTYSKCGNVKYAKQVFDDMVERNV 690
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
TT+ +I GLA HG +A F +M+ +GI P T+V +L+AC+ G ++ E+
Sbjct: 691 TTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNH 750
Query: 243 MTR------------------------------DYGIEPQIEHYGCIVDLLSRVGRPEEA 272
D +E + + ++ L++ GR EA
Sbjct: 751 AVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEA 810
Query: 273 YDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQ 306
DF MK P+ ++L+AC G + G +
Sbjct: 811 LDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRR 847
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 150/304 (49%), Gaps = 40/304 (13%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
+++H ++K G+ N KL+ +Y +CG + A Q+FD++ + N + T MI Y
Sbjct: 137 AKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKN-IYIWTTMIGGYA 195
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
E+G E+A V+ + M+++ +PNE+T +
Sbjct: 196 EYGHAEDAMRVYDK-------------------------------MRQECGQPNEITYLS 224
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L AC L+ G+ IH+++ + + V AL+NMY +CG I+ A +F++M ER+
Sbjct: 225 ILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERN 284
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ +I GLA +GR EA +F +M +G P T+V +LNA + G ++ E+
Sbjct: 285 VISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEV-H 343
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIH 298
S + G+ + +V + ++ G ++A +D +T I +M+G L H
Sbjct: 344 SHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQ----H 399
Query: 299 GKLQ 302
G+ Q
Sbjct: 400 GRGQ 403
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 162/378 (42%), Gaps = 65/378 (17%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D+ +I+ Y + G +++A VF + +D + W AM+ GL +NG A +F +M
Sbjct: 456 SDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQM 515
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
Q++ + P+ T + +L+ ALE +H + + + + VG A I+MY RCG I
Sbjct: 516 QQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSI 575
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA- 226
D A +F+++ R VTT+N++I G A EA+ +F +M +G P TF+ +L+A
Sbjct: 576 DDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSAN 635
Query: 227 ---------------CSHGGLVDL--GFEIFQSMTR-----------DYGIEPQIEHYGC 258
+ GLVDL G + + ++ D +E + +
Sbjct: 636 VDEEALEWVKEVHSHATDAGLVDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTM 695
Query: 259 IVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQ------------- 302
++ L++ G +A+ M I PD S+LSAC G L+
Sbjct: 696 MIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAG 755
Query: 303 ------LGEQIAKRLLDCRSADSG-------------TYVLLSNAYASSGKWKEAVQIRA 343
+G + C S D ++ ++ A G+ EA+
Sbjct: 756 LVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFV 815
Query: 344 KMKEAGVQKEPGCSSIEV 361
KMK G K G S + V
Sbjct: 816 KMKSEGF-KPNGYSYVAV 832
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 128/276 (46%), Gaps = 11/276 (3%)
Query: 82 VCWTAMIDGLVRNGE----MARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRW 137
VC A +DG A+ + + + + + + V +L C + + L +
Sbjct: 80 VCANASVDGAAEQTHNVITAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQ 139
Query: 138 IHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR 197
+H + K ++ N V L+ +Y RCG + A QVF+++ ++++ + ++I G A +G
Sbjct: 140 VHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGH 199
Query: 198 SIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYG 257
+ +A+ ++ +M + +P ++T++ +L AC + G +I + + G + +
Sbjct: 200 AEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQS-GFQSDVRVET 258
Query: 258 CIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC 314
+V++ + G E+A +D + + +M+G L + L Q+ +
Sbjct: 259 ALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGF-- 316
Query: 315 RSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
+S TYV + NA AS+G + ++ + AG+
Sbjct: 317 -IPNSYTYVSILNANASAGALEWVKEVHSHAVNAGL 351
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 200/452 (44%), Positives = 288/452 (63%), Gaps = 1/452 (0%)
Query: 37 AMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGE 96
A +LFD MP C +V MI Y + G + A +F ++ +D V W AMI G ++G
Sbjct: 326 AKELFDVMP-CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGH 384
Query: 97 MARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGA 156
AL LF M+R+ R N + LS C+ + ALELG+ +H + K + VG A
Sbjct: 385 SYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNA 444
Query: 157 LINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPT 216
L+ MY +CG I++A +F+EM +D+ ++N++IAG + HG EA+ F M +G++P
Sbjct: 445 LLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPD 504
Query: 217 KVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFI 276
T V VL+ACSH GLVD G + F +MT+DYG+ P +HY C+VDLL R G EEA++ +
Sbjct: 505 DATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLM 564
Query: 277 TNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWK 336
NM PD + G+LL A ++HG +L E A ++ +SG YVLLSN YASSG+W
Sbjct: 565 KNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWG 624
Query: 337 EAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEG 396
+ ++R +M++ GV+K PG S IE+ N+ H F +GD HP++++I+ +++L +K G
Sbjct: 625 DVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAG 684
Query: 397 YSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIK 456
Y T VVLHD+E+ EKE + HSERLA+ YG++ IRV+KNLRVC DCH+ IK
Sbjct: 685 YVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIK 744
Query: 457 LIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
+A +T R II+RD NRFHHF++G+CSCGDYW
Sbjct: 745 YMAKVTGRLIILRDNNRFHHFKDGSCSCGDYW 776
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 145/326 (44%), Gaps = 22/326 (6%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
++ Y + GEF+ A LFDEMPE D+V+ VMI YV + + A E+F R+ +D
Sbjct: 96 MISGYLRNGEFELARMLFDEMPE-RDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCS 154
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W ++ G +NG + A +F M N+V+ +LSA Q LE +
Sbjct: 155 WNTILSGYAQNGCVDDARRVFDRMP----EKNDVSWNALLSAYVQNSKLEEA----CVLF 206
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
R + + L+ + + I +A Q F+ MK RDV ++N++I G A +G EA +
Sbjct: 207 GSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQ 266
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
+F E + T+ +++ +V+ E+F M + G +
Sbjct: 267 LFDESPVHDV----FTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQG-- 320
Query: 264 SRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV 323
RV +E +D + ++ + M+ KI L +++ KR D ++
Sbjct: 321 ERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR-------DPVSWA 373
Query: 324 LLSNAYASSGKWKEAVQIRAKMKEAG 349
+ Y+ SG EA+++ M+ G
Sbjct: 374 AMIAGYSQSGHSYEALRLFVLMEREG 399
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 34/199 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++HG+++K G + L+ +Y KCG ++A LF EM D+V+ MI Y
Sbjct: 423 GKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA-GKDIVSWNTMIAGYS 481
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG E AL F M+R+ ++P++ T+V
Sbjct: 482 RHGFGE-------------------------------EALRFFESMKREGLKPDDATMVA 510
Query: 122 VLSACSQLGALELGR-WIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VLSACS G ++ GR + H+ + + N ++++ R G +++A + + M E
Sbjct: 511 VLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFE 570
Query: 180 RDVTTYNSLIAGLAMHGRS 198
D + +L+ +HG +
Sbjct: 571 PDAAIWGTLLGASRVHGNT 589
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/524 (40%), Positives = 312/524 (59%), Gaps = 38/524 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +IH V+++GL N L+ +YGKCG +A ++ D+MP C DVV+ ++
Sbjct: 156 GMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMP-CRDVVSWNSLVAGCA 214
Query: 62 EHGLVENAFEV-------------------------------------FSRVKVKDTVCW 84
+G ++A EV F ++ K V W
Sbjct: 215 RNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSW 274
Query: 85 TAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGK 144
MI + N A A+D+F +M+ V P+ ++I VL AC L AL LGR IH Y+ +
Sbjct: 275 NVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVR 334
Query: 145 HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEM 204
R+ N ++ ALI+MY++CG ++ A +VF++MK RDV ++ S+I+ M+G+ +AV +
Sbjct: 335 KRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSL 394
Query: 205 FREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLS 264
F M + G+ P + FV VL+ACSH GL+D G F+ MT + I P+IEH+ C+VDLL
Sbjct: 395 FSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLG 454
Query: 265 RVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVL 324
R G+ +EAY FI M + P+ + G+LLSAC+++ + +G A +L SG YVL
Sbjct: 455 RAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVL 514
Query: 325 LSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKK 384
LSN YA +G+W++ +R+ MK G++K PG S+ E++N +H F+ GD HPQ +QIY++
Sbjct: 515 LSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEE 574
Query: 385 MQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKN 444
+ +K GY P T+ LHD+E+ +KE LA+HSE+LAI + +++T P + IR+ KN
Sbjct: 575 LDVSVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKN 634
Query: 445 LRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
LRVC DCH KLI+ I R+I +RD NRFHHF NG CSCGDYW
Sbjct: 635 LRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 678
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 175/389 (44%), Gaps = 75/389 (19%)
Query: 3 REIHGQV-LKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
+++H ++ + L SN S +KL+ Y CGE +FDE+P+
Sbjct: 55 KKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPK--------------- 99
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K+ V + MI V N + AL +F+ M + P+ T C
Sbjct: 100 -----------------KNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPC 142
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL A S L +G IH+ + + +DLN VG LI+MY +CG + +A +V ++M RD
Sbjct: 143 VLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRD 202
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF--EI 239
V ++NSL+AG A +G+ +A+E+ +EM G++P T +L A ++ L ++ F E+
Sbjct: 203 VVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEM 262
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACK 296
F + + + ++ + P EA D M+ + PD I + S+L AC
Sbjct: 263 FMKLANK-----SLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACG 317
Query: 297 IHGKLQLGEQI-------------------------------AKRLLD-CRSADSGTYVL 324
L LG +I A+ + D + D ++
Sbjct: 318 DLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTS 377
Query: 325 LSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
+ +AY +GK ++AV + ++M++ G+ +
Sbjct: 378 MISAYGMNGKGRDAVSLFSRMQDLGLNPD 406
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 195/487 (40%), Positives = 301/487 (61%), Gaps = 39/487 (8%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIHG ++ GL ++ L+++Y KC D+ +
Sbjct: 258 GKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCR---------------------- 295
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
VF+ + +D + W ++I G V+NG L FR+M ++P +
Sbjct: 296 ----------VFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSS 345
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
++ AC+ L L LG+ +H Y+ ++ D N + +L++MY++CG+I A Q+F+ M+ RD
Sbjct: 346 IMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRD 405
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++ ++I G A+HG++ +A+E+F +M +GI+ VL ACSHGGLVD ++ F
Sbjct: 406 MVSWTAMIMGCALHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWKYFN 458
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SMTRD+GI P +EHY + DLL R GR EEAYDFI M I P + +LLSAC++H +
Sbjct: 459 SMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKNI 518
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+ E++A R+L+ ++G Y+LL+N Y+++ +WKEA + RA M+ G++K P CS IEV
Sbjct: 519 DMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEV 578
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N+++ F+ GD HP E+I + M+ L ++++ EGY P T V HD+E+ +K++ + HS
Sbjct: 579 KNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHS 638
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ERLAI +G+I+T TIRV KNLRVC DCH+ K I+ I R+I+VRD +RFHHF+NGT
Sbjct: 639 ERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGT 698
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 699 CSCGDYW 705
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 159/317 (50%), Gaps = 20/317 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKD-------AMQLFDEMPECNDVVAST 54
G +HG ++++GL + T L+ +Y K ++ A ++FDEM E V +
Sbjct: 125 GESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTV 184
Query: 55 VMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP 114
+++ ++ ++F + KD V W +I G RNG L + REM N++P
Sbjct: 185 SVLS-------EDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKP 237
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
+ T+ VL ++ + G+ IH + +D + V +LI+MY++C + + +VF
Sbjct: 238 DSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVF 297
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
+ ERD ++NS+IAG +G E + FR+M+ I+P +F ++ AC+H +
Sbjct: 298 TLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLH 357
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
LG ++ +TR+ G + I +VD+ ++ G A M++ D + +++
Sbjct: 358 LGKQLHGYITRN-GFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLR-DMVSWTAMIMG 415
Query: 295 CKIHGK----LQLGEQI 307
C +HG+ ++L EQ+
Sbjct: 416 CALHGQAPDAIELFEQM 432
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 122/285 (42%), Gaps = 34/285 (11%)
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
Y L+ ++ +F+ + + W ++I +G ++L F M + P+
Sbjct: 50 YSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVF 109
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSR-------------CGD 166
VL +C+ L L LG +H Y+ + +D + G AL+NMYS+ G+
Sbjct: 110 PSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGE 169
Query: 167 I-------------------DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
+ D ++FE M E+D+ ++N++IAG A +G E + M RE
Sbjct: 170 VFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIRE 229
Query: 208 MINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
M ++P T VL + + G EI R G++ I ++D+ ++
Sbjct: 230 MGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQ-GLDADIYVASSLIDMYAKCT 288
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
R ++ T + D I S+++ C +G G + +++L
Sbjct: 289 RVADSCRVFT-LLTERDGISWNSIIAGCVQNGLFDEGLRFFRQML 332
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/487 (42%), Positives = 299/487 (61%), Gaps = 33/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ IHG V+K+GL + L LY KCG A F++
Sbjct: 293 GKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQ------------------ 334
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
VEN +F W AMI G V+NG A++LFR M+ N+RP+ +T+
Sbjct: 335 ----VENPSLIF----------WNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTS 380
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
++AC+Q+G+LEL RW+ Y+ + IV +LI+ Y++CG +D A VF+ + ++D
Sbjct: 381 SIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKD 440
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +++++ G +HG+ E++ +F M G+ P VTFVG+L AC + GLV+ G+++F
Sbjct: 441 VVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFH 500
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M RDYGIEP+ +HY C+VDLL R G + AY+F+ NM I P + G+LLSACKIH +
Sbjct: 501 RM-RDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHV 559
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
LGE A+RL ++G YV LSN YASS W ++R M+E G+ K G S IE+
Sbjct: 560 TLGEYAAERLFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEI 619
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N ++ F GD HP+ ++I++++++L++ +K G+ P TE VLHD+ E E L HS
Sbjct: 620 NGKLQAFQAGDKTHPRSKEIFEEVEDLERRLKEAGFVPHTESVLHDLNYEETEETLCNHS 679
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ERLAI YGLIST P TT+R+ KNLR C++CH+ IKLI+ + R+I+VRD RFHHF++G
Sbjct: 680 ERLAIAYGLISTPPGTTLRITKNLRACDNCHAAIKLISKLVSREIVVRDACRFHHFKDGA 739
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 740 CSCGDYW 746
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 172/413 (41%), Gaps = 97/413 (23%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
+I+ ++L GL+ KLV GE A +LFD+ P+
Sbjct: 93 QIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPD----------------- 135
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
D W A++ R+G A++++ MQ V P+ + CVL
Sbjct: 136 ---------------PDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVL 180
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
ACS L ALE+GR +H + +H + + V L+ +Y++CG+I +A VF + +R +
Sbjct: 181 KACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIV 240
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HGGL 232
++ S+I+G A +G+ IEA+ +F EM +RP + V VL A + HG +
Sbjct: 241 SWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCV 300
Query: 233 VDLG----FEIFQSMTRDYGI---------------EPQIEHYGCIVDLLSRVGRPEEAY 273
+ +G F++ S+T Y P + + ++ + G EEA
Sbjct: 301 IKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAI 360
Query: 274 DFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQ---------------IAKRLLD-- 313
+ MK I PD I + S ++AC G L+L + L+D
Sbjct: 361 ELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTY 420
Query: 314 --CRSADSGTYVL-------------LSNAYASSGKWKEAVQIRAKMKEAGVQ 351
C S D +V + Y G+ +E++ + M++AGV
Sbjct: 421 AKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVS 473
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 169/356 (47%), Gaps = 45/356 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +HGQ+ + G S+ + LV LY KCGE
Sbjct: 192 GRRVHGQIFRHGFESDVFVQNGLVALYAKCGE---------------------------- 223
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ A VF R+ + V WT++I G +NG+ AL +F EM++ NVRP+ + +V
Sbjct: 224 ----IVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVS 279
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL A + + LE G+ IH + K ++ + +L ++Y++CG + A F +++
Sbjct: 280 VLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPS 339
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG--FEI 239
+ +N++I+G +G + EA+E+FR M ++ IRP +T + AC+ G ++L +
Sbjct: 340 LIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDE 399
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+ SM+ + ++D ++ G + A F+ + D ++ +++ +HG
Sbjct: 400 YISMSE---FRNDVIVNTSLIDTYAKCGSVDMA-RFVFDRIPDKDVVVWSAMMVGYGLHG 455
Query: 300 KLQLGEQIAKRLLDCR----SADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
+ G + R S + T+V L A +SG +E + +M++ G++
Sbjct: 456 Q---GRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIE 508
>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
Length = 592
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/489 (43%), Positives = 298/489 (60%), Gaps = 31/489 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG +H + K G + + LV LYG CG F+ A ++FDEMP
Sbjct: 134 EGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMP--------------- 178
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V+ ++ V W +M++ NG L +F EM + P+ TIV
Sbjct: 179 ---------------VRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIV 223
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VL+AC++ GAL LGR +H Y+ K + N V ALI++Y++CG ++ A ++FEEM
Sbjct: 224 SVLTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLG 283
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
R V ++ SLI GLA +G EA+E+F M + + PT++T VGVL ACSH GLVD GF
Sbjct: 284 RTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRY 343
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F M DYGI P+IEH GC+VDLL R GR EEAYD+I M + P+ ++ +LL +C +H
Sbjct: 344 FDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHK 403
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
KL+LG+ +RL++ SG YVLLSN YA+ G W + +R M + V+K PG S +
Sbjct: 404 KLELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLV 463
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E+ N ++EF++GD HP+ EQIY+ + E+ + ++ EGY P T VL DIE+ EKE AL
Sbjct: 464 ELRNSVYEFVMGDRSHPESEQIYEMLAEIAERLRREGYIPRTSNVLADIEEEEKETALNY 523
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSERLAI + L+ + P IR++KNLR+C DCH LI+ + R+IIVRDR+RFHHF+
Sbjct: 524 HSERLAIAFALLKSLPGIPIRIIKNLRMCGDCHVAFNLISKVYDREIIVRDRSRFHHFQG 583
Query: 480 GTCSCGDYW 488
G CSC DYW
Sbjct: 584 GACSCKDYW 592
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 6/202 (2%)
Query: 100 ALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALIN 159
AL+L R R P+ T ++ AC++L AL G +H+ K+ V +L++
Sbjct: 103 ALELHR---RRLALPDTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVH 159
Query: 160 MYSRCGDIDKALQVFEEM--KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTK 217
+Y CG + A +VF+EM + R++ ++NS++ A +GR E + +F EM+ P
Sbjct: 160 LYGACGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDG 219
Query: 218 VTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFIT 277
T V VL AC+ G + LG + G+ ++DL ++ G +A
Sbjct: 220 FTIVSVLTACAEFGALALGRRV-HVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFE 278
Query: 278 NMKIAPDHIMLGSLLSACKIHG 299
M + + SL+ +G
Sbjct: 279 EMGLGRTVVSWTSLIVGLAANG 300
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/524 (40%), Positives = 314/524 (59%), Gaps = 39/524 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++HG V K+GL N L+ LYGKCG +A + DEM + DVV+ M+ Y
Sbjct: 152 GLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEM-QSKDVVSWNSMVAGYA 210
Query: 62 EHGLVENAF-------------------------------------EVFSRVKVKDTVCW 84
++ ++A E+F ++ K V W
Sbjct: 211 QNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSSENVLYVEEMFMNLEKKSLVSW 270
Query: 85 TAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGK 144
MI ++N +++DL+ +M + V P+ +T VL AC L AL LGR IH Y+ +
Sbjct: 271 NVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVER 330
Query: 145 HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEM 204
++ N ++ +LI+MY+RCG ++ A +VF+ MK RDV ++ SLI+ M G+ AV +
Sbjct: 331 KKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVAL 390
Query: 205 FREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLS 264
F EM N G P + FV +L+ACSH GL++ G F+ MT DY I P IEH+ C+VDLL
Sbjct: 391 FTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLG 450
Query: 265 RVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVL 324
R GR +EAY+ I M + P+ + G+LLS+C+++ + +G A +LL +SG YVL
Sbjct: 451 RSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNMDIGILAADKLLQLAPEESGYYVL 510
Query: 325 LSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKK 384
LSN YA +G+W E IR+ MK ++K PG S++E+NN++H F+ GD HPQ ++IY++
Sbjct: 511 LSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQVHTFLAGDTYHPQSKEIYEE 570
Query: 385 MQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKN 444
+ L +K GY P T+ LHD+E+ +KE LA+HSE+LAI + +++T+ + IR+ KN
Sbjct: 571 LSVLVGKMKELGYVPKTDSALHDVEEEDKECHLAVHSEKLAIVFAILNTQE-SPIRITKN 629
Query: 445 LRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
LRVC DCH KLI+ I +R+I++RD NRFHHF++G CSCGDYW
Sbjct: 630 LRVCGDCHIAAKLISKIVQREIVIRDTNRFHHFKDGICSCGDYW 673
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 166/384 (43%), Gaps = 74/384 (19%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
+ +H +V L N S +KL+ Y GE A +FD +PE N V+ VMI Y+
Sbjct: 52 KNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERN-VIFYNVMIRSYMN 110
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
+ L ++A V FR+M P+ T CV
Sbjct: 111 NHLYDDALLV-------------------------------FRDMVSGGFSPDHYTYPCV 139
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L ACS L +G +H + K +DLN VG LI +Y +CG + +A V +EM+ +DV
Sbjct: 140 LKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDV 199
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF--EIF 240
++NS++AG A + + +A+++ REM +P T +L A ++ ++ + E+F
Sbjct: 200 VSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSSENVLYVEEMF 259
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKI 297
++ + + + ++ + + P ++ D M ++ PD I S+L AC
Sbjct: 260 MNLEKK-----SLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGD 314
Query: 298 HGKLQLGEQI-------------------------------AKRLLD-CRSADSGTYVLL 325
L LG +I AKR+ D + D ++ L
Sbjct: 315 LSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSL 374
Query: 326 SNAYASSGKWKEAVQIRAKMKEAG 349
+AY +G+ AV + +M+ +G
Sbjct: 375 ISAYGMTGQGYNAVALFTEMQNSG 398
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/448 (46%), Positives = 293/448 (65%), Gaps = 7/448 (1%)
Query: 48 NDVVASTVMINCYVEH----GLVENAFEVFSRVKV--KDTVCWTAMIDGLVRNGEMARAL 101
N +VA + N V H GL E+A VF + V ++ V W ++++G NG L
Sbjct: 149 NGLVALVFVKNSLVHHYGACGLFESAHRVFDEIPVLERNLVSWNSVMNGFAANGRPNEVL 208
Query: 102 DLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMY 161
+FRE ++ P+ TIV VL+AC+++GAL LGR +H + K + N VG ALI++Y
Sbjct: 209 TIFRETLEADLMPDGFTIVSVLTACAEIGALTLGRRVHVFASKVGLVGNSHVGNALIDLY 268
Query: 162 SRCGDIDKALQVFEEMK-ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTF 220
++CG ++ A +VFEEM R V ++ SLI GLA +G +A+E+F M + + PT +T
Sbjct: 269 AKCGGVEDAWKVFEEMGVARTVVSWTSLIVGLAGNGFGKDALELFGLMERERLIPTDITM 328
Query: 221 VGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
VGVL ACSH GLVD GF F M YGI P IEH GC+VDLL R GR EEA+++IT M
Sbjct: 329 VGVLYACSHCGLVDDGFRYFNEMQDKYGIAPGIEHLGCMVDLLGRAGRVEEAHNYITTMP 388
Query: 281 IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQ 340
+ P+ ++ +LL AC +H KL+LGE RL++ SG YVLLSN YA+ G+W +A
Sbjct: 389 VEPNAVVWRTLLGACAMHKKLELGEAAWARLVELDPGHSGDYVLLSNLYAAVGRWADAHV 448
Query: 341 IRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPS 400
+R M GV+K PG S +E+ N ++EF++GD HP+ +QIY+ + E+ + ++ +GY P
Sbjct: 449 LRKTMATHGVRKNPGHSLVELRNSVYEFVMGDRSHPESDQIYQTLAEIAERLRCQGYVPR 508
Query: 401 TEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIAN 460
T VL DIE+ EKE AL HSERLAI + L+ + P + IR+VKNLR+C DCH +IKLI+
Sbjct: 509 TSNVLADIEEEEKETALNYHSERLAIAFALLKSLPGSPIRIVKNLRMCGDCHLVIKLISK 568
Query: 461 ITKRKIIVRDRNRFHHFENGTCSCGDYW 488
+ R+IIVRDR+RFHHF+ G CSC DYW
Sbjct: 569 VYDREIIVRDRSRFHHFKGGECSCKDYW 596
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 92/180 (51%), Gaps = 9/180 (5%)
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+R P+ T +L AC++L AL G +H+ K+ + V +L++ Y CG
Sbjct: 112 RRRLAPPDTHTYPPLLQACTRLLALREGESLHAEAAKNGLVALVFVKNSLVHHYGACGLF 171
Query: 168 DKALQVFEEMK--ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
+ A +VF+E+ ER++ ++NS++ G A +GR E + +FRE + + P T V VL
Sbjct: 172 ESAHRVFDEIPVLERNLVSWNSVMNGFAANGRPNEVLTIFRETLEADLMPDGFTIVSVLT 231
Query: 226 ACSHGGLVDLG--FEIFQSMTRDYGIEPQIEHYG-CIVDLLSRVGRPEEAYDFITNMKIA 282
AC+ G + LG +F S G H G ++DL ++ G E+A+ M +A
Sbjct: 232 ACAEIGALTLGRRVHVFASKVGLVG----NSHVGNALIDLYAKCGGVEDAWKVFEEMGVA 287
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 37/200 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H K+GL N L++LY KCG +DA ++F+EM VA TV
Sbjct: 242 GRRVHVFASKVGLVGNSHVGNALIDLYAKCGGVEDAWKVFEEMG-----VARTV------ 290
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
V WT++I GL NG AL+LF M+R+ + P ++T+V
Sbjct: 291 --------------------VSWTSLIVGLAGNGFGKDALELFGLMERERLIPTDITMVG 330
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRI--DLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
VL ACS G ++ G R+ + K+ I + H+ G ++++ R G +++A M
Sbjct: 331 VLYACSHCGLVDDGFRYFNEMQDKYGIAPGIEHL--GCMVDLLGRAGRVEEAHNYITTMP 388
Query: 179 -ERDVTTYNSLIAGLAMHGR 197
E + + +L+ AMH +
Sbjct: 389 VEPNAVVWRTLLGACAMHKK 408
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/487 (42%), Positives = 290/487 (59%), Gaps = 34/487 (6%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
R I LK+G+ S L +Y + E + A QLFDE PE
Sbjct: 335 RLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPE---------------- 378
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
K W AMI G +NG RA+ LF+EM + PN VT+ +
Sbjct: 379 ----------------KSLASWNAMISGYTQNGLTDRAISLFQEMM-PQLSPNPVTVTSI 421
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
LSAC+QLGAL +G+W+H + R++ N V AL++MY++CG I +A Q+F+ M +++V
Sbjct: 422 LSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNV 481
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
T+N++I G +HG EA+++F EM+ GI PT VTF+ +L ACSH GLV G EIF S
Sbjct: 482 VTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHS 541
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
M +YG +P EHY C+VD+L R G+ A +FI M + P + G+LL AC IH +
Sbjct: 542 MANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTE 601
Query: 303 LGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVN 362
+ +KRL + G YVLLSN Y++ + +A +R +K+ + K PGC+ IE++
Sbjct: 602 MANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEID 661
Query: 363 NEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPST-EVVLHDIEDWEKEWALAIHS 421
++ + F GD HPQ I++ +++L ++ GY T LHD+ED EKE + +HS
Sbjct: 662 DQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHS 721
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GLISTKP T IR++KNLRVC DCH+ K I+ IT+R I+VRD NRFHHF+NG
Sbjct: 722 EKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGI 781
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 782 CSCGDYW 788
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 160/341 (46%), Gaps = 7/341 (2%)
Query: 9 VLKLGLRSNRSTRLKLVELYGKCGEFKDAMQ---LFDEMPECNDVVASTVMINCYVEHGL 65
+L +GL + +T ++ + E++ M L + +DV T +I+ Y + G
Sbjct: 205 MLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGK 264
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
+F ++ D + + AMI G N E A+ LFRE+ R N T+V ++
Sbjct: 265 SCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPV 324
Query: 126 CSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTY 185
L+L R I + K I L V AL +Y R ++ A Q+F+E E+ + ++
Sbjct: 325 YLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASW 384
Query: 186 NSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR 245
N++I+G +G + A+ +F+EM+ Q + P VT +L+AC+ G + +G + + +
Sbjct: 385 NAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIG-KWVHGLIK 442
Query: 246 DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGE 305
+E + +VD+ ++ G EA ++ + + + ++++ +HG +
Sbjct: 443 SERLESNVYVSTALVDMYAKCGSIVEARQLF-DLMVDKNVVTWNAMITGYGLHGHGKEAL 501
Query: 306 QIAKRLLDCRSADSG-TYVLLSNAYASSGKWKEAVQIRAKM 345
++ +L +G T++ + A + SG E +I M
Sbjct: 502 KLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSM 542
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 149/338 (44%), Gaps = 35/338 (10%)
Query: 47 CNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
+++ + +++ Y + E A +VF + +DTV W MI G RN ++ +F +
Sbjct: 145 ASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVD 204
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M + + T+ VL+A ++L LG I K + + V LI++YS+CG
Sbjct: 205 MLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGK 264
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL-- 224
K +F+++ + D+ +YN++I+G + + AV +FRE++ G R T VG++
Sbjct: 265 SCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPV 324
Query: 225 ----NACSHGGLV-DLGFEI-----------------------FQSMTRDYGIEPQIEHY 256
N L+ +L +I F D E + +
Sbjct: 325 YLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASW 384
Query: 257 GCIVDLLSRVGRPEEAYDFITNM--KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC 314
++ ++ G + A M +++P+ + + S+LSAC G L +G+ + L+
Sbjct: 385 NAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGKWV-HGLIKS 443
Query: 315 RSADSGTYV--LLSNAYASSGKWKEAVQIRAKMKEAGV 350
+S YV L + YA G EA Q+ M + V
Sbjct: 444 ERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNV 481
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 144/312 (46%), Gaps = 4/312 (1%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D+ + T + + + + G V + ++F++V D + +I G NG ++ L+ ++
Sbjct: 45 DLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLR 104
Query: 109 R-DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ N+RP+ T +SA S+L +G +H++ + N VG A++++Y +
Sbjct: 105 KXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRA 164
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+ A +VF+ M ERD +N++I+G + + +++ +F +M++ G+ T VL A
Sbjct: 165 ELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAV 224
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
+ LG I Q + G+ + ++ L S+ G+ + + PD I
Sbjct: 225 AELQEYRLGMGI-QCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQID-QPDLIS 282
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDC-RSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
+++S + + + + + LL + +S T V L Y + + I+
Sbjct: 283 YNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSL 342
Query: 347 EAGVQKEPGCSS 358
+ G+ +P S+
Sbjct: 343 KIGIILQPSVST 354
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 77/196 (39%), Gaps = 34/196 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +HG + L SN LV++Y KCG +A QLFD M + N
Sbjct: 434 GKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKN------------- 480
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
V W AMI G +G AL LF EM + + P VT +
Sbjct: 481 -------------------VVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLS 521
Query: 122 VLSACSQLGALELGRWI-HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
+L ACS G + G I HS + ++++ R G + AL+ E M E
Sbjct: 522 ILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLE 581
Query: 180 RDVTTYNSLIAGLAMH 195
+ +L+ +H
Sbjct: 582 PGPAVWGALLGACMIH 597
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/487 (42%), Positives = 290/487 (59%), Gaps = 34/487 (6%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
R I LK+G+ S L +Y + E + A QLFDE PE
Sbjct: 335 RLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPE---------------- 378
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
K W AMI G +NG RA+ LF+EM + PN VT+ +
Sbjct: 379 ----------------KSLASWNAMISGYTQNGLTDRAISLFQEMM-PQLSPNPVTVTSI 421
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
LSAC+QLGAL +G+W+H + R++ N V AL++MY++CG I +A Q+F+ M +++V
Sbjct: 422 LSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNV 481
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
T+N++I G +HG EA+++F EM+ GI PT VTF+ +L ACSH GLV G EIF S
Sbjct: 482 VTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHS 541
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
M +YG +P EHY C+VD+L R G+ A +FI M + P + G+LL AC IH +
Sbjct: 542 MANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTE 601
Query: 303 LGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVN 362
+ +KRL + G YVLLSN Y++ + +A +R +K+ + K PGC+ IE++
Sbjct: 602 MANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEID 661
Query: 363 NEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPST-EVVLHDIEDWEKEWALAIHS 421
++ + F GD HPQ I++ +++L ++ GY T LHD+ED EKE + +HS
Sbjct: 662 DQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHS 721
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GLISTKP T IR++KNLRVC DCH+ K I+ IT+R I+VRD NRFHHF+NG
Sbjct: 722 EKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGI 781
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 782 CSCGDYW 788
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 160/341 (46%), Gaps = 7/341 (2%)
Query: 9 VLKLGLRSNRSTRLKLVELYGKCGEFKDAMQ---LFDEMPECNDVVASTVMINCYVEHGL 65
+L +GL + +T ++ + E++ M L + +DV T +I+ Y + G
Sbjct: 205 MLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGK 264
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
+F ++ D + + AMI G N E A+ LFRE+ R N T+V ++
Sbjct: 265 SCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPV 324
Query: 126 CSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTY 185
L+L R I + K I L V AL +Y R ++ A Q+F+E E+ + ++
Sbjct: 325 YLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASW 384
Query: 186 NSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR 245
N++I+G +G + A+ +F+EM+ Q + P VT +L+AC+ G + +G + + +
Sbjct: 385 NAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIG-KWVHGLIK 442
Query: 246 DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGE 305
+E + +VD+ ++ G EA ++ + + + ++++ +HG +
Sbjct: 443 SERLESNVYVSTALVDMYAKCGSIVEARQLF-DLMVDKNVVTWNAMITGYGLHGHGKEAL 501
Query: 306 QIAKRLLDCRSADSG-TYVLLSNAYASSGKWKEAVQIRAKM 345
++ +L +G T++ + A + SG E +I M
Sbjct: 502 KLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSM 542
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 149/338 (44%), Gaps = 35/338 (10%)
Query: 47 CNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
+++ + +++ Y + E A +VF + +DTV W MI G RN ++ +F +
Sbjct: 145 ASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVD 204
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M + + T+ VL+A ++L LG I K + + V LI++YS+CG
Sbjct: 205 MLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGK 264
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL-- 224
K +F+++ + D+ +YN++I+G + + AV +FRE++ G R T VG++
Sbjct: 265 SCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPV 324
Query: 225 ----NACSHGGLV-DLGFEI-----------------------FQSMTRDYGIEPQIEHY 256
N L+ +L +I F D E + +
Sbjct: 325 YLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASW 384
Query: 257 GCIVDLLSRVGRPEEAYDFITNM--KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC 314
++ ++ G + A M +++P+ + + S+LSAC G L +G+ + L+
Sbjct: 385 NAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGKWV-HGLIKS 443
Query: 315 RSADSGTYV--LLSNAYASSGKWKEAVQIRAKMKEAGV 350
+S YV L + YA G EA Q+ M + V
Sbjct: 444 ERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNV 481
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 144/312 (46%), Gaps = 4/312 (1%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM- 107
D+ + T + + + + G V + ++F++V D + +I G NG ++ L+ +
Sbjct: 45 DLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLR 104
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
++ N+RP+ T +SA S+L +G +H++ + N VG A++++Y +
Sbjct: 105 KKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRA 164
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+ A +VF+ M ERD +N++I+G + + +++ +F +M++ G+ T VL A
Sbjct: 165 ELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAV 224
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
+ LG I Q + G+ + ++ L S+ G+ + + PD I
Sbjct: 225 AELQEYRLGMGI-QCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQID-QPDLIS 282
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDC-RSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
+++S + + + + + LL + +S T V L Y + + I+
Sbjct: 283 YNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSL 342
Query: 347 EAGVQKEPGCSS 358
+ G+ +P S+
Sbjct: 343 KIGIILQPSVST 354
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 77/196 (39%), Gaps = 34/196 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +HG + L SN LV++Y KCG +A QLFD M + N
Sbjct: 434 GKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKN------------- 480
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
V W AMI G +G AL LF EM + + P VT +
Sbjct: 481 -------------------VVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLS 521
Query: 122 VLSACSQLGALELGRWI-HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
+L ACS G + G I HS + ++++ R G + AL+ E M E
Sbjct: 522 ILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLE 581
Query: 180 RDVTTYNSLIAGLAMH 195
+ +L+ +H
Sbjct: 582 PGPAVWGALLGACMIH 597
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 197/488 (40%), Positives = 300/488 (61%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+EIHG V++ G+ S DV + +++ Y
Sbjct: 260 KGKEIHGYVIRKGIDS--------------------------------DVYIGSSLVDMY 287
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ +E++ VFSR+ +D + W +++ G V+NG AL LFR+M V+P V
Sbjct: 288 AKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFS 347
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+ AC+ L L LG+ +H Y+ + N + AL++MYS+CG+I A ++F+ M
Sbjct: 348 SVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVL 407
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++ ++I G A+HG EAV +F EM QG++P +V FV VL ACSH GLVD + F
Sbjct: 408 DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYF 467
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SMT+ YG+ ++EHY + DLL R G+ EEAY+FI+ M + P + +LLS+C +H
Sbjct: 468 NSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKN 527
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
L+L E++A+++ S + G YVL+ N YAS+G+WKE ++R +M++ G++K+P CS IE
Sbjct: 528 LELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIE 587
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+ N+ H F+ GD HP ++I + ++ + + ++ EGY T VLHD+++ K L H
Sbjct: 588 MKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGH 647
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLA+ +G+I+T+P TTIRV KN+R+C DCH IK I+ IT+R+IIVRD +RFHHF G
Sbjct: 648 SERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRG 707
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 708 NCSCGDYW 715
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 154/309 (49%), Gaps = 20/309 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKC---GEFKDAMQLFDEMPECN------DVVA 52
G +HG +++LG+ + T L+ +Y K G +FDEMP+ DV A
Sbjct: 124 GESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKA 183
Query: 53 STVMINCYVEHGL--VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD 110
T C + G+ V FEV R KD V + +I G ++G AL + REM
Sbjct: 184 ET----CIMPFGIDSVRRVFEVMPR---KDVVSYNTIIAGYAQSGMYEDALRMVREMGTT 236
Query: 111 NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
+++P+ T+ VL S+ + G+ IH Y+ + ID + +G +L++MY++ I+ +
Sbjct: 237 DLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDS 296
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
+VF + RD ++NSL+AG +GR EA+ +FR+M+ ++P V F V+ AC+H
Sbjct: 297 ERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHL 356
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGS 290
+ LG ++ + R G I +VD+ S+ G + A M + D + +
Sbjct: 357 ATLHLGKQLHGYVLRG-GFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVL-DEVSWTA 414
Query: 291 LLSACKIHG 299
++ +HG
Sbjct: 415 IIMGHALHG 423
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 145/368 (39%), Gaps = 76/368 (20%)
Query: 51 VASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD 110
+++++I+ Y L+ A +F +K + W ++I ++AL F EM+
Sbjct: 40 TSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRAS 99
Query: 111 NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMY--------- 161
P+ VL +C+ + L G +H ++ + +D + G AL+NMY
Sbjct: 100 GRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSK 159
Query: 162 --------------SRCGD-------------IDKALQVFEEMKERDVTTYNSLIAGLAM 194
S GD ID +VFE M +DV +YN++IAG A
Sbjct: 160 ISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQ 219
Query: 195 HGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HGGLVDLGFE----I 239
G +A+ M REM ++P T VL S HG ++ G + I
Sbjct: 220 SGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYI 279
Query: 240 FQSMTRDYGIEPQIE---------------HYGCIVDLLSRVGRPEEAYDFITNM---KI 281
S+ Y +IE + +V + GR EA M K+
Sbjct: 280 GSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKV 339
Query: 282 APDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNA----YASSGKWKE 337
P + S++ AC L LG+Q+ +L G+ + +++A Y+ G K
Sbjct: 340 KPGAVAFSSVIPACAHLATLHLGKQLHGYVL---RGGFGSNIFIASALVDMYSKCGNIKA 396
Query: 338 AVQIRAKM 345
A +I +M
Sbjct: 397 ARKIFDRM 404
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/488 (41%), Positives = 298/488 (61%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G++IH +K G S+ ++++Y KCG+ M+N
Sbjct: 1125 QGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGD----------------------MVNAG 1162
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ VF+ + D V WT+MI G V NG +AL ++ M++ V P+E T
Sbjct: 1163 I----------VFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFA 1212
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
++ A S + ALE GR +H+ + K + VG +L++MY++CG+I+ A ++F++M R
Sbjct: 1213 TLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVR 1272
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
++ +N+++ GLA HG + EAV +F+ M + GI P +V+F+G+L+ACSH GL +E
Sbjct: 1273 NIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYL 1332
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM DYGIEP+IEHY C+VD L R G +EA I M + +LL AC+I G
Sbjct: 1333 HSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGD 1392
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++ G+++A RL DS YVLLSN YA++ +W + R MK V+K+PG S I+
Sbjct: 1393 VETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWID 1452
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
V N +H F++ D HPQ + IY K++E+ + ++ +GY P TE VL D+ED EKE +L H
Sbjct: 1453 VKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYH 1512
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI YGLIST TTIRV+KNLRVC DCH+ IK I+ + +R+I++RD NRFHHF +G
Sbjct: 1513 SEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDG 1572
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 1573 VCSCGDYW 1580
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 144/322 (44%), Gaps = 52/322 (16%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
+HG +K+GL + LV +Y KCG +DA LFD M E DVV +M+ YV+ G
Sbjct: 749 VHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRE-RDVVLWNMMLKGYVQLG 807
Query: 65 LVENAFEVFSRV---------------------------------------------KVK 79
L + AF++FS
Sbjct: 808 LEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDDNP 867
Query: 80 DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIH 139
D CW + + G+ A++ F M N+ + VT++ VL+A + LELG+ +H
Sbjct: 868 DVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVH 927
Query: 140 SYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSI 199
K +D + V +L+NMYS+ G A +VF +MK D+ ++NS+I+ A
Sbjct: 928 GIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEE 987
Query: 200 EAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM---TRDYGIEPQIEHY 256
E+V +F +++++G++P T VL ACS L+D G I + + G
Sbjct: 988 ESVNLFIDLLHEGLKPDHFTLASVLRACS--SLID-GLNISRQIHVHALKTGNIADSFVA 1044
Query: 257 GCIVDLLSRVGRPEEAYDFITN 278
++D+ S+ G+ EEA N
Sbjct: 1045 TTLIDVYSKSGKMEEAEFLFQN 1066
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 143/309 (46%), Gaps = 4/309 (1%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+DV + ++N Y + G A EVF+ +K D + W +MI ++ +++LF ++
Sbjct: 937 SDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDL 996
Query: 108 QRDNVRPNEVTIVCVLSACSQL-GALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
+ ++P+ T+ VL ACS L L + R IH + K + V LI++YS+ G
Sbjct: 997 LHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGK 1056
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+++A +F+ + D+ +N+++ G + +A+E+F + G + ++T A
Sbjct: 1057 MEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKA 1116
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
C L+D G +I + G + + I+D+ + G A + N APD +
Sbjct: 1117 CGCLVLLDQGKQIHAHAIK-AGFDSDLHVNSGILDMYIKCGDMVNA-GIVFNYISAPDDV 1174
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
S++S C +G +I R+ R D T+ L A + ++ Q+ A +
Sbjct: 1175 AWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANV 1234
Query: 346 KEAGVQKEP 354
+ +P
Sbjct: 1235 IKLDCVSDP 1243
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 115/234 (49%), Gaps = 3/234 (1%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D +T +I+ Y + G +E A +F D CW AM+ G + + +AL+LF +
Sbjct: 1040 DSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIH 1099
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ + +++T+ AC L L+ G+ IH++ K D + V +++MY +CGD+
Sbjct: 1100 KSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMV 1159
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A VF + D + S+I+G +G +A+ ++ M + P + TF ++ A S
Sbjct: 1160 NAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASS 1219
Query: 229 HGGLVDLGFEIFQSMTR-DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKI 281
++ G ++ ++ + D +P + +VD+ ++ G E+AY M +
Sbjct: 1220 CVTALEQGRQLHANVIKLDCVSDPFVG--TSLVDMYAKCGNIEDAYRLFKKMNV 1271
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 99/227 (43%), Gaps = 27/227 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ H +++ G + L+ +Y KCG A Q+FD PE D+V ++ Y
Sbjct: 640 GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPE-RDLVTWNAILGAYA 698
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
A +D +G L LFR ++ +T+
Sbjct: 699 ------------------------ASVDS--NDGNAQEGLHLFRLLRASLGSTTRMTLAP 732
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL C G L +H Y K ++ + V GAL+N+YS+CG + A +F+ M+ERD
Sbjct: 733 VLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERD 792
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
V +N ++ G G EA ++F E G+RP + + +LN S
Sbjct: 793 VVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVS 839
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 130/327 (39%), Gaps = 64/327 (19%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV S ++N Y + G + +A +F ++ +D V W M+ G V+ G A LF E
Sbjct: 761 DVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFH 820
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
R +RP+E ++ +L+ S++ E G+W+ + +
Sbjct: 821 RSGLRPDEFSVQLILNGVSEVNWDE-GKWLADQVQAY----------------------- 856
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A ++ DV +N ++ G + A+E F M I VT + VL A +
Sbjct: 857 -AAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVA 915
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK-------- 280
++LG ++ + G++ + +V++ S++G A + +MK
Sbjct: 916 GTDDLELGKQV-HGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWN 974
Query: 281 --------------------------IAPDHIMLGSLLSACK--IHGKLQLGEQIAKRLL 312
+ PDH L S+L AC I G L + QI L
Sbjct: 975 SMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDG-LNISRQIHVHAL 1033
Query: 313 DCRS-ADSGTYVLLSNAYASSGKWKEA 338
+ ADS L + Y+ SGK +EA
Sbjct: 1034 KTGNIADSFVATTLIDVYSKSGKMEEA 1060
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 200/440 (45%), Positives = 292/440 (66%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D+ S+ +++ YV+ G + A F + V D V WT +I G + NGE RAL +F +M+
Sbjct: 558 DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMR 617
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
V P+E TI + A S L ALE GR IH+ K + VG +L++MY++CG ID
Sbjct: 618 LMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSID 677
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +F+ ++ ++T +N+++ GLA HG EA+++F++M + GI+P KVTF+GVL+ACS
Sbjct: 678 DAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACS 737
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLV ++ +SM RDYGI+P+IEHY C+ D L R G +EA + I +M + M
Sbjct: 738 HSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMY 797
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+LL+AC++ G + G+++A +LL+ DS YVLLSN YA++ KW E R MK
Sbjct: 798 RTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGH 857
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
V+K+PG S IEV N+IH F++ D +PQ E IYKK++++ + +K EGY P T+ L D+
Sbjct: 858 KVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYKKVKDMIRDIKQEGYVPETDFTLVDV 917
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
E+ EKE AL HSE+LA+ +GL+ST P T IRV+KNLRVC DCH+ +K I+ + R+I++
Sbjct: 918 EEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYISKVYDREIVL 977
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD NRFH F++G CSCGDYW
Sbjct: 978 RDANRFHRFKDGICSCGDYW 997
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 121/262 (46%), Gaps = 39/262 (14%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
HG K+GL + LV +Y K G+ K+ LF+EMP DVV +M+ Y+E G
Sbjct: 174 FHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPY-RDVVLWNLMLKAYLEMG 232
Query: 65 LVENAFEV------------------FSRVK--------------------VKDTVCWTA 86
E A ++ SR+ V + +
Sbjct: 233 FKEEAIDLSSAFHTSGLHPNEITLRLLSRISGDDSEAGQVKSFENGNDASAVSEIISRNK 292
Query: 87 MIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHR 146
++ G + G+ + L F +M ++ ++VT + VL+ +L +L LG+ +H K
Sbjct: 293 ILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLG 352
Query: 147 IDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
+DL V +LINMY + I A VF M ERD+ ++NS+IAG+A +EAV +F
Sbjct: 353 LDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFM 412
Query: 207 EMINQGIRPTKVTFVGVLNACS 228
+++ G++P T VL A S
Sbjct: 413 QLLRCGLKPDHYTMTSVLKAAS 434
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 168/355 (47%), Gaps = 15/355 (4%)
Query: 8 QVLKLGLRSNRSTRLKLVELYGKCGE-FKDAMQLFDEMPECNDVV---ASTVMINCYVEH 63
Q+L+ GL+ + T +++ E + Q+ + N+V ST +I+ Y +
Sbjct: 413 QLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRN 472
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
++ A +F R D V W AM+ G ++ + + L+LF M + R ++ T+ VL
Sbjct: 473 RCMKEAEVLFGRNNF-DLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVL 531
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
C L A+ G+ +H+Y K DL+ V +++MY +CGD+ A F+ + D
Sbjct: 532 KTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDV 591
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF-QS 242
+ +LI+G +G A+ +F +M G+ P + T + A S ++ G +I +
Sbjct: 592 AWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANA 651
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDF---ITNMKIAPDHIMLGSLLSACKIHG 299
+ + +P + +VD+ ++ G ++AY I M I + ML L +
Sbjct: 652 LKLNCTSDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKE 709
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQ-IRAKMKEAGVQKE 353
LQL +Q+ + D T++ + +A + SG EA + IR+ ++ G++ E
Sbjct: 710 ALQLFKQMESLGI---KPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPE 761
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 31/221 (14%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ H ++L L R L+ +Y KCG A ++FD+MPE D+V+ ++ Y
Sbjct: 65 GKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPE-RDLVSWNSILAAYA 123
Query: 62 E--HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
+ G+VEN E F LFR +++D V + +T+
Sbjct: 124 QSSEGVVENVKEAFL----------------------------LFRILRQDVVYTSRMTL 155
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+L C G + H Y K +D + V GAL+N+Y + G + + +FEEM
Sbjct: 156 SPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPY 215
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTF 220
RDV +N ++ G EA+++ G+ P ++T
Sbjct: 216 RDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITL 256
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 38/200 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR+IH LKL S+ LV++Y KCG D
Sbjct: 643 QGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDD------------------------ 678
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
A+ +F R+++ + W AM+ GL ++GE AL LF++M+ ++P++VT +
Sbjct: 679 --------AYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFI 730
Query: 121 CVLSACSQLGAL-ELGRWIHSYMGKHRI--DLNHIVGGALINMYSRCGDIDKALQVFEEM 177
VLSACS G + E ++I S + I ++ H L + R G + +A + + M
Sbjct: 731 GVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHY--SCLADALGRAGLVKEAENLIDSM 788
Query: 178 K-ERDVTTYNSLIAGLAMHG 196
E + Y +L+A + G
Sbjct: 789 SMEASASMYRTLLAACRVQG 808
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 133/307 (43%), Gaps = 5/307 (1%)
Query: 50 VVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
+ S +IN Y + + A VF+ + +D + W ++I G+ ++ A+ LF ++ R
Sbjct: 357 LTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLR 416
Query: 110 DNVRPNEVTIVCVLSACSQLG-ALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
++P+ T+ VL A S L L L + IH + K + V ALI+ YSR +
Sbjct: 417 CGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMK 476
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+A +F D+ +N++++G + +E+F M QG R T VL C
Sbjct: 477 EAEVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCG 535
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
++ G ++ + G + + I+D+ + G A F + PD +
Sbjct: 536 FLFAINQGKQVHAYAIKS-GYDLDLWVSSGILDMYVKCGDMSAA-QFAFDSIPVPDDVAW 593
Query: 289 GSLLSACKIHGKLQLGEQIAKRL-LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+L+S C +G+ + + ++ L D T L+ A + ++ QI A +
Sbjct: 594 TTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALK 653
Query: 348 AGVQKEP 354
+P
Sbjct: 654 LNCTSDP 660
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
Query: 132 LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAG 191
L LG+ H+ + + + LI+MYS+CG + A +VF++M ERD+ ++NS++A
Sbjct: 62 LMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAA 121
Query: 192 LAMHGRSI-----EAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRD 246
A + EA +FR + + +++T +L C H G V E F
Sbjct: 122 YAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV-CASESFHGYACK 180
Query: 247 YGIEPQIEHYGCIVDLLSRVGRPEE 271
G++ G +V++ + G+ +E
Sbjct: 181 IGLDGDDFVAGALVNIYLKFGKVKE 205
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 121/319 (37%), Gaps = 54/319 (16%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D VA ++N Y++ G V+ +F + +D V W M+ + G A+DL
Sbjct: 186 DDFVAGA-LVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAF 244
Query: 108 QRDNVRPNEVTIVCVL------SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMY 161
+ PNE+T+ + S Q+ + E G + I N I+ G Y
Sbjct: 245 HTSGLHPNEITLRLLSRISGDDSEAGQVKSFENGN--DASAVSEIISRNKILSG-----Y 297
Query: 162 SRCGDIDKALQVFEEMKERDV----TTY----------NSLIAGLAMHGRSIE-----AV 202
G L+ F +M E D+ T+ +SL G +H +++ +
Sbjct: 298 LHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLML 357
Query: 203 EMFREMINQGIRPTKVTFV-GVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVD 261
+ +IN + K+ V N S L+ I D +E C+
Sbjct: 358 TVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAV-----CLFM 412
Query: 262 LLSRVGRPEEAYDFITNMKIAPDHIMLGSLL-SACKIHGKLQLGEQIAKRLLDCRS-ADS 319
L R G + PDH + S+L +A + L L +QI + + ADS
Sbjct: 413 QLLRCG-------------LKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADS 459
Query: 320 GTYVLLSNAYASSGKWKEA 338
L +AY+ + KEA
Sbjct: 460 FVSTALIDAYSRNRCMKEA 478
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/492 (40%), Positives = 311/492 (63%), Gaps = 7/492 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR IHG V+K GL ++ ++++YGK G + LF++ E + I
Sbjct: 271 GRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQF-EMMEAGVCNAYITGLS 329
Query: 62 EHGLVENAFEVFSRVKVK----DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+GLV+ A E+F K + + V WT++I G +NG+ AL+LFREMQ V+PN V
Sbjct: 330 RNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHV 389
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGK-HRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
TI +L AC + AL GR H + + H +D H VG ALI+MY++CG I+ + VF
Sbjct: 390 TIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVH-VGSALIDMYAKCGRINLSQIVFNM 448
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
M +++ +NSL+ G +MHG++ E + +F ++ ++P ++F +L+AC GL D G
Sbjct: 449 MPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
++ F+ M+ +YGI+P++EHY C+V+LL R G+ +EAYD I M PD + G+LL++C+
Sbjct: 509 WKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCR 568
Query: 297 IHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGC 356
+ + L E A++L + GTYVLLSN YA+ G W E IR KM+ G++K PGC
Sbjct: 569 LQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGC 628
Query: 357 SSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWA 416
S I+V N ++ + GD HPQ +QI +KM E+ + ++ G+ P+ + LHD+E+ E+E
Sbjct: 629 SWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQM 688
Query: 417 LAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHH 476
L HSE+LA+ +GL++T T ++V+KNLR+C DCH++IK I++ R+I +RD NRFHH
Sbjct: 689 LWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHH 748
Query: 477 FENGTCSCGDYW 488
F++G CSCGD+W
Sbjct: 749 FKDGICSCGDFW 760
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 177/390 (45%), Gaps = 51/390 (13%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G++IH GL + + + +Y +CG DA ++FD M + DVV + ++ Y
Sbjct: 135 GKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSD-KDVVTCSALLCAYA 193
Query: 62 EHGLVENAFEVFSRVKVK----DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
G +E + S ++ + V W ++ G R+G A+ +F+++ P++V
Sbjct: 194 RKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQV 253
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMY---------------- 161
T+ VL + L +GR IH Y+ K + + V A+I+MY
Sbjct: 254 TVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQF 313
Query: 162 ---------------SRCGDIDKALQVFEEMKER----DVTTYNSLIAGLAMHGRSIEAV 202
SR G +DKAL++FE KE+ +V ++ S+IAG A +G+ IEA+
Sbjct: 314 EMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEAL 373
Query: 203 EMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQI---EHYG-C 258
E+FREM G++P VT +L AC G + LG T + + + H G
Sbjct: 374 ELFREMQVAGVKPNHVTIPSMLPAC--GNIAALG---HGRSTHGFAVRVHLLDNVHVGSA 428
Query: 259 IVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SA 317
++D+ ++ GR + + NM + + SL++ +HGK + I + L+ R
Sbjct: 429 LIDMYAKCGRINLS-QIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKP 487
Query: 318 DSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
D ++ L +A G E + M E
Sbjct: 488 DFISFTSLLSACGQVGLTDEGWKYFKMMSE 517
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 93/196 (47%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
ND S +I Y + +A V + ++++I L + +++ +F M
Sbjct: 48 NDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRM 107
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ P+ + + C++L A ++G+ IH +D++ V G++ +MY RCG +
Sbjct: 108 FSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRM 167
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A +VF+ M ++DV T ++L+ A G E V + EM + GI V++ G+L+
Sbjct: 168 GDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGF 227
Query: 228 SHGGLVDLGFEIFQSM 243
+ G +FQ +
Sbjct: 228 NRSGYHKEAVVMFQKI 243
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/442 (45%), Positives = 290/442 (65%), Gaps = 1/442 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
++V +IN Y E V+ A VF R+ VC+ AMI G R AL LFREM
Sbjct: 164 DNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREM 223
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
Q N++PNE+T++ VLS+C+ LG+L+LG+WIH Y KH V ALI+M+++CG +
Sbjct: 224 QGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTALIDMFAKCGSL 283
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
D A+ +FE M+ +D ++++I A HG++ ++ MF M ++ ++P ++TF+G+LNAC
Sbjct: 284 DDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDEITFLGLLNAC 343
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SH GLV+ G E F M ++GI P I+HYG +VDLL R G E+AY+FI + I+P ++
Sbjct: 344 SHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDKLPISPTPML 403
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
LL+AC H L+L E++++R+L+ + G YV+LSN YA + KW+ +R MK+
Sbjct: 404 WRILLAACSSHNNLELAEKVSERILELDDSHGGDYVILSNLYARNKKWEAVDSLRKVMKD 463
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH- 406
K PGCSSIEVNN +HEF GD ++++ + E+ + +KL GY P T +V+H
Sbjct: 464 RKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLAGYVPDTSMVVHA 523
Query: 407 DIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKI 466
D+ D EKE L HSE+LAI +GL++T P TTIRVVKNLRVC DCHS KLI+ I RK+
Sbjct: 524 DMGDQEKEITLRYHSEKLAIAFGLLNTPPGTTIRVVKNLRVCRDCHSAAKLISLIFGRKV 583
Query: 467 IVRDRNRFHHFENGTCSCGDYW 488
++RD RFHHFE+G CSC D+W
Sbjct: 584 VLRDVQRFHHFEDGKCSCRDFW 605
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 156/317 (49%), Gaps = 8/317 (2%)
Query: 27 LYGKCGEFKDAMQL--FDEMPECNDVVASTVMINCYVE---HGLVENAFEVFSRVKVKDT 81
L KC ++ MQ+ + DV +T +IN E + A +F + D
Sbjct: 37 LISKCNSERELMQIQAYAIKSHQEDVSFNTKLINFCTESPTESSMSYARHLFDAMSEPDI 96
Query: 82 VCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSY 141
V + ++ G R+ +LF E+ D++ P+ T +L AC+ ALE GR +H
Sbjct: 97 VIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAVAKALEEGRQLHCL 156
Query: 142 MGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEA 201
K +D N V LINMY+ C D+D A VF+ + E V YN++I G A R EA
Sbjct: 157 SMKLGVDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAMITGYARRNRPNEA 216
Query: 202 VEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVD 261
+ +FREM + ++P ++T + VL++C+ G +DLG I + + +G ++ ++D
Sbjct: 217 LSLFREMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHE-YAKKHGFCKYVKVNTALID 275
Query: 262 LLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL-LDCRSADSG 320
+ ++ G ++A NM+ D +++ A HG+ + + +R+ + D
Sbjct: 276 MFAKCGSLDDAVSIFENMRYK-DTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDEI 334
Query: 321 TYVLLSNAYASSGKWKE 337
T++ L NA + +G +E
Sbjct: 335 TFLGLLNACSHTGLVEE 351
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 89/166 (53%), Gaps = 5/166 (3%)
Query: 47 CNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
C V +T +I+ + + G +++A +F ++ KDT W+AMI +G+ ++ +F
Sbjct: 264 CKYVKVNTALIDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFER 323
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG--GALINMYSRC 164
M+ +NV+P+E+T + +L+ACS G +E GR S+M H + + G+++++ R
Sbjct: 324 MRSENVQPDEITFLGLLNACSHTGLVEEGREYFSWM-VHEFGIVPSIKHYGSMVDLLGRA 382
Query: 165 GDIDKALQVFEEMKERDVTT-YNSLIAGLAMHGRSIEAVEMFREMI 209
G ++ A + +++ + L+A + H ++E E E I
Sbjct: 383 GHLEDAYEFIDKLPISPTPMLWRILLAACSSHN-NLELAEKVSERI 427
>gi|317106766|dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
Length = 563
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/488 (43%), Positives = 304/488 (62%), Gaps = 34/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG++IH Q+L+ G S+ + LV Y KC E A ++FDE+ E
Sbjct: 110 EGKQIHAQILRSGFSSSPYVQSSLVNFYSKCEEITIARKVFDEITE-------------- 155
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++ VCW+AM+ G R G + AL +FREMQ + P+EV++V
Sbjct: 156 ------------------RNLVCWSAMVSGYARLGMINEALIMFREMQVVGIEPDEVSLV 197
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSAC+ +GAL++G+W+H+Y+ K I ++ + ALINMY++CG I+KA ++F+EM+ +
Sbjct: 198 GVLSACAMVGALDIGKWVHAYIKKRMIHVDLELNTALINMYAKCGCIEKAREIFDEMRVK 257
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++S+I GLA+HG + +A+ +F M +P VTF+G+L+AC+HGGLV G +
Sbjct: 258 DSKAWSSMIVGLAIHGLAEDALNVFSRMEEAQAKPNHVTFIGILSACAHGGLVSDGKRYW 317
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM + GIEP +EHYGC+VDLL R G +EAYDF + PD ++ +LL A +
Sbjct: 318 SSML-ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRM 375
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
LQ E +A +LL+ + Y++L+N YAS + ++ +R MKE G++ PGC+SIE
Sbjct: 376 LQKAEMVAGKLLELEPWKAENYIILANLYASVSQLEKVSHVRKMMKENGIKALPGCTSIE 435
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
V+ +H F+ GD HP+ E+I K ++++ + + GY P VVLH + D EKE L H
Sbjct: 436 VDGFVHNFVTGDWSHPEAEEIKKTLRDVALKILISGYKPFVSVVLHLVNDEEKENVLYEH 495
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLAI YGL+ TK TIR+VKNLRVC DCH + K+I+ I R+IIVRDR RFH F NG
Sbjct: 496 SERLAIAYGLMKTKAPATIRIVKNLRVCGDCHEVTKIISKIYDREIIVRDRVRFHKFVNG 555
Query: 481 TCSCGDYW 488
TCSC DYW
Sbjct: 556 TCSCKDYW 563
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 152/291 (52%), Gaps = 5/291 (1%)
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDG-LVRNGEMARALDLFREM-QRDNVRPNEVTIVC 121
G + A ++FS++ + ++I G L + LF++M + PN T+
Sbjct: 38 GNFDYARKIFSQIPNPGIFAYNSVIRGCLYTKIPSKEPIHLFKDMVGKGYPNPNTFTMAF 97
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL ACS + ALE G+ IH+ + + + V +L+N YS+C +I A +VF+E+ ER+
Sbjct: 98 VLKACSIIMALEEGKQIHAQILRSGFSSSPYVQSSLVNFYSKCEEITIARKVFDEITERN 157
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++++++G A G EA+ MFREM GI P +V+ VGVL+AC+ G +D+G +
Sbjct: 158 LVCWSAMVSGYARLGMINEALIMFREMQVVGIEPDEVSLVGVLSACAMVGALDIG-KWVH 216
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+ + I +E ++++ ++ G E+A + M++ D S++ IHG
Sbjct: 217 AYIKKRMIHVDLELNTALINMYAKCGCIEKAREIFDEMRVK-DSKAWSSMIVGLAIHGLA 275
Query: 302 QLGEQIAKRLLDCRS-ADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
+ + R+ + ++ + T++ + +A A G + + + M E G++
Sbjct: 276 EDALNVFSRMEEAQAKPNHVTFIGILSACAHGGLVSDGKRYWSSMLELGIE 326
>gi|242037817|ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
gi|241920157|gb|EER93301.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
Length = 606
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/489 (43%), Positives = 296/489 (60%), Gaps = 34/489 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR+ H +KLG + R L+ +Y +CG D A+ VM
Sbjct: 151 EGRQAHALAVKLGAADHDYVRPTLINMYAECG----------------DARAARVM---- 190
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
F V + AMI VR+ AL LFREMQ ++P VT++
Sbjct: 191 ------------FGGTDGGCVVSYNAMIAAAVRSSRPGEALVLFREMQGKGLKPTSVTVI 238
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSAC+ LGALELGRW+H Y+ K + V ALI+MY++CG ++ A+ VF+ M+ +
Sbjct: 239 SVLSACALLGALELGRWVHDYVRKIGLGSLVKVSTALIDMYAKCGSLEDAIDVFQGMESK 298
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++ +I A HG EA+ +F EM +G++P +TF+GVL ACSH GLV G + F
Sbjct: 299 DRQAWSVMIVAYANHGYGREAISLFEEMKKEGMKPDDITFLGVLYACSHSGLVSEGLQYF 358
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
M +D+GI P I+HYGC+ DLL+R G+ E AY FI + I P I+ +LLSAC HG
Sbjct: 359 DDM-KDHGIVPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGD 417
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+LG+++ +R+L + G YV+ SN A++G W+E +R M E GV K PGCSSIE
Sbjct: 418 FELGKRVFERILKLDDSHGGDYVIFSNLCANTGYWEEMNMVRKLMSEKGVVKVPGCSSIE 477
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH-DIEDWEKEWALAI 419
++N +HEF GD RHP+ ++ K + E+ +KL GY P+T V H ++ + EK +L
Sbjct: 478 IDNTVHEFFAGDGRHPKSQEARKMVDEVIDQLKLVGYVPNTSHVFHVEMGEEEKAISLKY 537
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GL++T P T+RVVKNLRVC DCHSM KL++ + R+II+RD NRFHHFE
Sbjct: 538 HSEKLAIAFGLLNTAPGATLRVVKNLRVCPDCHSMAKLVSMVFNRRIILRDLNRFHHFEE 597
Query: 480 GTCSCGDYW 488
G CSCGDYW
Sbjct: 598 GICSCGDYW 606
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 155/333 (46%), Gaps = 27/333 (8%)
Query: 69 AFEVFSRVK-VKDTVCWTAMIDGLVRNG-----EMARALDLFREMQRDNVRPNEVTIVCV 122
A +VF RV D V + ++ G R+ E A A+ +F M + V P+ T V +
Sbjct: 80 ARQVFDRVPHPADAVWYNTLLRGYARSSNPSSSEAAAAVRVFVRMLEEGVAPDTYTFVSL 139
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L AC+ A E GR H+ K + V LINMY+ CGD A +F V
Sbjct: 140 LKACAAARAGEEGRQAHALAVKLGAADHDYVRPTLINMYAECGDARAARVMFGGTDGGCV 199
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
+YN++IA R EA+ +FREM +G++PT VT + VL+AC+ G ++LG +
Sbjct: 200 VSYNAMIAAAVRSSRPGEALVLFREMQGKGLKPTSVTVISVLSACALLGALELGRWV-HD 258
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG--- 299
R G+ ++ ++D+ ++ G E+A D M+ + D ++ A HG
Sbjct: 259 YVRKIGLGSLVKVSTALIDMYAKCGSLEDAIDVFQGME-SKDRQAWSVMIVAYANHGYGR 317
Query: 300 -KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
+ L E++ K + D T++ + A + SG E +Q MK+ G+ PG
Sbjct: 318 EAISLFEEMKKEGM---KPDDITFLGVLYACSHSGLVSEGLQYFDDMKDHGIV--PGIK- 371
Query: 359 IEVNNEIHEFILGDI--RHPQREQIYKKMQELK 389
H + D+ R Q E+ YK + EL
Sbjct: 372 -------HYGCVTDLLARSGQLERAYKFIDELP 397
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 197/434 (45%), Positives = 293/434 (67%), Gaps = 1/434 (0%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+++ Y G V +A++VF ++ KD V W ++I+G NG+ AL L+ EM ++P+
Sbjct: 162 LLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMDLKGIKPD 221
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
TIV +LSAC+++GAL LG+ H YM K + N L+++Y+RCG +++A +F+
Sbjct: 222 GFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFD 281
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM-INQGIRPTKVTFVGVLNACSHGGLVD 234
EM +++ ++ SLI GLA++G EA+E+F+ M +G+ P ++TFVG+L ACSH G+V
Sbjct: 282 EMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVK 341
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
GFE F+ M+ +Y IEP+IEH+GC+VDLL+R G+ ++AY++I M + P+ ++ +LL A
Sbjct: 342 EGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLLGA 401
Query: 295 CKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
C +HG L E ++L SG YVLLSN YAS +W + +IR +M GV+K P
Sbjct: 402 CTVHGDSDLAELARMKILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVRKVP 461
Query: 355 GCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKE 414
G S +EV N +HEF++GD HPQ + IY K++E+ ++LEGY P V D+E+ EKE
Sbjct: 462 GHSLVEVGNRVHEFLMGDKSHPQNDMIYAKLKEMTDRLRLEGYVPQISNVYVDVEEEEKE 521
Query: 415 WALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRF 474
AL HSE++AI + LIST IRVVKNL+VC DCH IKL++ + R+I+VRDR+RF
Sbjct: 522 NALVYHSEKIAIAFMLISTPERWPIRVVKNLKVCADCHLAIKLVSKVYNREIVVRDRSRF 581
Query: 475 HHFENGTCSCGDYW 488
HHF+NG+CSC DYW
Sbjct: 582 HHFKNGSCSCQDYW 595
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 144/287 (50%), Gaps = 14/287 (4%)
Query: 69 AFEVFSRV-KVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN-VRPNEVTIVCVLSAC 126
A +VFS++ K + W +I G G A+ L+REM+ V P+ T +L A
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAV 131
Query: 127 SQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYN 186
++ + LG IHS + + V +L+++Y+ CGD+ A +VF++M E+D+ +N
Sbjct: 132 GKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 187 SLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRD 246
S+I G A +G+ EA+ ++ EM +GI+P T V +L+AC+ G + LG M +
Sbjct: 192 SVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIK- 250
Query: 247 YGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG----KLQ 302
G+ + ++DL +R GR EEA M + + + SL+ ++G ++
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNGLGKEAIE 309
Query: 303 LGEQIAKR--LLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
L + + + LL C T+V + A + G KE + +M E
Sbjct: 310 LFKNMESKEGLLPCEI----TFVGILYACSHCGMVKEGFEYFRRMSE 352
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 44/217 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ H ++K+GL N + L++LY +CG ++A LFDEM + N V
Sbjct: 241 GKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSV----------- 289
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ-RDNVRPNEVTIV 120
WT++I GL NG A++LF+ M+ ++ + P E+T V
Sbjct: 290 ---------------------SWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFV 328
Query: 121 CVLSACSQLGALELG-----RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
+L ACS G ++ G R Y + RI+ H G ++++ +R G + KA +
Sbjct: 329 GILYACSHCGMVKEGFEYFRRMSEEYKIEPRIE--HF--GCMVDLLARAGQVKKAYEYIL 384
Query: 176 EMK-ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ 211
+M + +V + +L+ +HG S + E+ R I Q
Sbjct: 385 KMPMQPNVVIWRTLLGACTVHGDS-DLAELARMKILQ 420
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/488 (41%), Positives = 298/488 (61%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G++IH +K G S+ ++++Y KCG+ M+N
Sbjct: 48 QGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGD----------------------MVNAG 85
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ VF+ + D V WT+MI G V NG +AL ++ M++ V P+E T
Sbjct: 86 I----------VFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFA 135
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
++ A S + ALE GR +H+ + K + VG +L++MY++CG+I+ A ++F++M R
Sbjct: 136 TLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVR 195
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
++ +N+++ GLA HG + EAV +F+ M + GI P +V+F+G+L+ACSH GL +E
Sbjct: 196 NIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYL 255
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM DYGIEP+IEHY C+VD L R G +EA I M + +LL AC+I G
Sbjct: 256 HSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGD 315
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++ G+++A RL DS YVLLSN YA++ +W + R MK V+K+PG S I+
Sbjct: 316 VEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWID 375
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
V N +H F++ D HPQ + IY K++E+ + ++ +GY P TE VL D+ED EKE +L H
Sbjct: 376 VKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYH 435
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI YGLIST TTIRV+KNLRVC DCH+ IK I+ + +R+I++RD NRFHHF +G
Sbjct: 436 SEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDG 495
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 496 VCSCGDYW 503
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 97/196 (49%), Gaps = 3/196 (1%)
Query: 87 MIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHR 146
M+ G + + +AL+LF + + + +++T+ AC L L+ G+ IH++ K
Sbjct: 1 MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60
Query: 147 IDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
D + V +++MY +CGD+ A VF + D + S+I+G +G +A+ ++
Sbjct: 61 FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 120
Query: 207 EMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR-DYGIEPQIEHYGCIVDLLSR 265
M + P + TF ++ A S ++ G ++ ++ + D +P + +VD+ ++
Sbjct: 121 RMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVG--TSLVDMYAK 178
Query: 266 VGRPEEAYDFITNMKI 281
G E+AY M +
Sbjct: 179 CGNIEDAYRLFKKMNV 194
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 200/452 (44%), Positives = 288/452 (63%), Gaps = 1/452 (0%)
Query: 37 AMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGE 96
A +LFD MP C +V MI Y + G + A +F ++ +D V W AMI G ++G
Sbjct: 331 AKELFDVMP-CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGH 389
Query: 97 MARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGA 156
AL LF +M+R+ R N + LS C+ + ALELG+ +H + K + VG A
Sbjct: 390 SFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNA 449
Query: 157 LINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPT 216
L+ MY +CG I++A +F+EM +D+ ++N++IAG + HG A+ F M +G++P
Sbjct: 450 LLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPD 509
Query: 217 KVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFI 276
T V VL+ACSH GLVD G + F +MT+DYG+ P +HY C+VDLL R G E+A++ +
Sbjct: 510 DATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLM 569
Query: 277 TNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWK 336
NM PD + G+LL A ++HG +L E A ++ +SG YVLLSN YASSG+W
Sbjct: 570 KNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWG 629
Query: 337 EAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEG 396
+ ++R +M++ GV+K PG S IE+ N+ H F +GD HP++++I+ ++EL +K G
Sbjct: 630 DVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAG 689
Query: 397 YSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIK 456
Y T VVLHD+E+ EKE + HSERLA+ YG++ IRV+KNLRVC DCH+ IK
Sbjct: 690 YVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIK 749
Query: 457 LIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
+A IT R II+RD NRFHHF++G+CSCGDYW
Sbjct: 750 YMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 138/309 (44%), Gaps = 52/309 (16%)
Query: 36 DAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNG 95
+A Q FD M DVV+ +I Y + G ++ A ++F V+D WTAM+ G ++N
Sbjct: 237 EARQFFDSM-NVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNR 295
Query: 96 EMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGG 155
+ A +LF +M NEV+ +L+ Q +E+ + + M +
Sbjct: 296 MVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS----TWN 347
Query: 156 ALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRP 215
+I Y++CG I +A +F++M +RD ++ ++IAG + G S EA+ +F +M +G R
Sbjct: 348 TMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRL 407
Query: 216 TKVTFVGVLNACS-----------HGGLVDLGFE------------------------IF 240
+ +F L+ C+ HG LV G+E +F
Sbjct: 408 NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLF 467
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKI 297
+ M I + ++ SR G E A F +MK + PD + ++LSAC
Sbjct: 468 KEMA-----GKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSH 522
Query: 298 HGKLQLGEQ 306
G + G Q
Sbjct: 523 TGLVDKGRQ 531
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 147/326 (45%), Gaps = 22/326 (6%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
++ Y + GEF+ A +LFDEMPE D+V+ VMI YV + + A E+F + +D
Sbjct: 101 MISGYLRNGEFELARKLFDEMPE-RDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCS 159
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W M+ G +NG + A +F M N+V+ +LSA Q +E +
Sbjct: 160 WNTMLSGYAQNGCVDDARSVFDRMP----EKNDVSWNALLSAYVQNSKMEEA----CMLF 211
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
K R + + L+ + + I +A Q F+ M RDV ++N++I G A G+ EA +
Sbjct: 212 KSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQ 271
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
+F E Q + T+ +++ +V+ E+F M + G +
Sbjct: 272 LFDESPVQDV----FTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQG-- 325
Query: 264 SRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV 323
R+ +E +D + ++ + M+ KI L +++ KR D ++
Sbjct: 326 ERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR-------DPVSWA 378
Query: 324 LLSNAYASSGKWKEAVQIRAKMKEAG 349
+ Y+ SG EA+++ +M+ G
Sbjct: 379 AMIAGYSQSGHSFEALRLFVQMEREG 404
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 34/199 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++HG+++K G + L+ +Y KCG ++A LF EM D+V+ MI Y
Sbjct: 428 GKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA-GKDIVSWNTMIAGYS 486
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG GE+ AL F M+R+ ++P++ T+V
Sbjct: 487 RHGF-----------------------------GEV--ALRFFESMKREGLKPDDATMVA 515
Query: 122 VLSACSQLGALELGR-WIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VLSACS G ++ GR + ++ + + N ++++ R G ++ A + + M E
Sbjct: 516 VLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFE 575
Query: 180 RDVTTYNSLIAGLAMHGRS 198
D + +L+ +HG +
Sbjct: 576 PDAAIWGTLLGASRVHGNT 594
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 193/491 (39%), Positives = 310/491 (63%), Gaps = 5/491 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLK----LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMI 57
G+ +HGQ+++L L LV LY K G+ A ++FD M DVV+ ++
Sbjct: 319 GKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTM-NLKDVVSWNTIL 377
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y++ G ++ A EVF + K+ + W M+ G V G AL LF +M+ ++V+P +
Sbjct: 378 SGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDY 437
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T ++AC +LGAL+ GR +H+++ + + ++ G AL+ MY++CG ++ A VF M
Sbjct: 438 TYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVM 497
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
D ++N++I+ L HG EA+E+F +M+ +GI P +++F+ +L AC+H GLVD GF
Sbjct: 498 PNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGF 557
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F+SM RD+GI P +HY ++DLL R GR EA D I M P + ++LS C+
Sbjct: 558 HYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRT 617
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
+G ++ G A +L GTY+LLSN Y+++G+W +A ++R M++ GV+KEPGCS
Sbjct: 618 NGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCS 677
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IEV ++IH F++GD +HP+ +++Y+ ++ + ++ GY P T+ VLHD+E EKE+ L
Sbjct: 678 WIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYIL 737
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LA+ +GL+ P T+ V+KNLR+C DCH+ + ++ R+I+VRD RFHHF
Sbjct: 738 FAHSEKLAVGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHF 797
Query: 478 ENGTCSCGDYW 488
++G CSCG+YW
Sbjct: 798 KDGECSCGNYW 808
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 162/374 (43%), Gaps = 76/374 (20%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFK---DAMQLFDEMPECNDVVASTVMINCY 60
++H VLK G + S L+ LY KC + DA ++ DEMP+ +D+ +T+++ Y
Sbjct: 186 QLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVG-Y 244
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V G V A VF V K V W AMI G V++G A A +LFR M + V +E T
Sbjct: 245 VRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFT 304
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHI------VGGALINMYSRCGDIDKALQVF 174
VLSAC+ G G+ +H + R+ N + V AL+ +YS+ G I A ++F
Sbjct: 305 SVLSACANAGFFVHGKSVHGQI--IRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIF 362
Query: 175 EEMKERDVTTYNS-------------------------------LIAGLAMHGRSIEAVE 203
+ M +DV ++N+ +++G G S +A++
Sbjct: 363 DTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALK 422
Query: 204 MFREMINQGIRPTKVTFVGVLNACS-----------HGGLVDLGFEIFQSMTRD------ 246
+F +M + ++P T+ G + AC H LV GFE S
Sbjct: 423 LFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYA 482
Query: 247 -----------YGIEPQIE--HYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGS 290
+ + P ++ + ++ L + G EA + M I PD I +
Sbjct: 483 KCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLT 542
Query: 291 LLSACKIHGKLQLG 304
+L+AC G + G
Sbjct: 543 ILTACNHAGLVDEG 556
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 164/395 (41%), Gaps = 50/395 (12%)
Query: 3 REIHGQVLKLGL---RSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINC 59
R +H ++L L S+ L+L+ LY + LF P+ V A+T ++
Sbjct: 45 RCLHARLLTADLLHAPSHPHLTLRLIHLYTLSPDLATPAALFRSDPDPGPV-AATSLVAA 103
Query: 60 YVEHGLVENAFEVFSRVKV--KDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPNE 116
+ G + +A F V +DTV AM+ R A A+ +F + ++RP++
Sbjct: 104 HAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDD 163
Query: 117 VTIVCVLSACSQLGALELGR--WIHSYMGKHRIDLNHIVGGALINMYSRC---------- 164
+ ++SA Q+ L +H + K V ALI +Y +C
Sbjct: 164 YSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDAR 223
Query: 165 ------------------------GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIE 200
GD++ A VFEE+ + +N++I+G G +
Sbjct: 224 KVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCAD 283
Query: 201 AVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR---DYGIEPQIEHYG 257
A E+FR M+++ + + TF VL+AC++ G G + + R ++ E +
Sbjct: 284 AFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNN 343
Query: 258 CIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSA 317
+V L S+ G+ A M + D + ++LS G L ++ K +
Sbjct: 344 ALVTLYSKGGKIVIAKRIFDTMNLK-DVVSWNTILSGYIDSGCLDKAVEVFKVM---PYK 399
Query: 318 DSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
+ +++++ + Y G ++A+++ +M+ V+
Sbjct: 400 NDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKP 434
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/488 (41%), Positives = 298/488 (61%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G++IH +K G S+ ++++Y KCG+ M+N
Sbjct: 410 QGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGD----------------------MVNAG 447
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ VF+ + D V WT+MI G V NG +AL ++ M++ V P+E T
Sbjct: 448 I----------VFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFA 497
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
++ A S + ALE GR +H+ + K + VG +L++MY++CG+I+ A ++F++M R
Sbjct: 498 TLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVR 557
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
++ +N+++ GLA HG + EAV +F+ M + GI P +V+F+G+L+ACSH GL +E
Sbjct: 558 NIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYL 617
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM DYGIEP+IEHY C+VD L R G +EA I M + +LL AC+I G
Sbjct: 618 HSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGD 677
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++ G+++A RL DS YVLLSN YA++ +W + R MK V+K+PG S I+
Sbjct: 678 VETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWID 737
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
V N +H F++ D HPQ + IY K++E+ + ++ +GY P TE VL D+ED EKE +L H
Sbjct: 738 VKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYH 797
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI YGLIST TTIRV+KNLRVC DCH+ IK I+ + +R+I++RD NRFHHF +G
Sbjct: 798 SEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDG 857
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 858 VCSCGDYW 865
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 164/348 (47%), Gaps = 19/348 (5%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV S ++N Y + G + +A +F ++ +D V W M+ G V+ G A LF E
Sbjct: 217 DVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFH 276
Query: 109 RDNVRPNEVTIVCVLSACSQLGA--LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
R +RP+E ++ +L+ C G LELG+ +H K +D + V +L+NMYS+ G
Sbjct: 277 RSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGC 336
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRP-----TKVTFV 221
A +VF +MK D+ ++NS+I+ A E+V +F +++++G++P +T
Sbjct: 337 AYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLA 396
Query: 222 GVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKI 281
AC L+D G +I + G + + I+D+ + G A + N
Sbjct: 397 TAAKACGCLVLLDQGKQIHAHAIK-AGFDSDLHVNSGILDMYIKCGDMVNA-GIVFNYIS 454
Query: 282 APDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNAYASSGKWKEAVQ 340
APD + S++S C +G +I R+ R D T+ L A + ++ Q
Sbjct: 455 APDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQ 514
Query: 341 IRAKMKEAGVQKEP--GCSSIEVNNEIHEFILGDIRHPQREQIYKKMQ 386
+ A + + +P G S +++ + G+I R ++KKM
Sbjct: 515 LHANVIKLDCVSDPFVGTSLVDMYAKC-----GNIEDAYR--LFKKMN 555
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 29/295 (9%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ H +++ G + L+ +Y KCG A Q+FD PE D+V ++ Y
Sbjct: 96 GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPE-RDLVTWNAILGAY- 153
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
A +D +G L LFR ++ +T+
Sbjct: 154 -----------------------AASVDS--NDGNAQEGLHLFRLLRASLGSTTRMTLAP 188
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL C G L +H Y K ++ + V GAL+N+YS+CG + A +F+ M+ERD
Sbjct: 189 VLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERD 248
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF-EIF 240
V +N ++ G G EA ++F E G+RP + + +LN C G DL +
Sbjct: 249 VVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQV 308
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
+ G++ + +V++ S++G A + +MK D I S++S+C
Sbjct: 309 HGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMK-HLDLISWNSMISSC 362
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 118/240 (49%), Gaps = 8/240 (3%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+DV + ++N Y + G A EVF+ +K D + W +MI ++ +++LF ++
Sbjct: 319 SDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDL 378
Query: 108 QRDNVRPN-----EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYS 162
+ ++P+ +T+ AC L L+ G+ IH++ K D + V +++MY
Sbjct: 379 LHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYI 438
Query: 163 RCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVG 222
+CGD+ A VF + D + S+I+G +G +A+ ++ M + P + TF
Sbjct: 439 KCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFAT 498
Query: 223 VLNACSHGGLVDLGFEIFQSMTR-DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKI 281
++ A S ++ G ++ ++ + D +P + +VD+ ++ G E+AY M +
Sbjct: 499 LIKASSCVTALEQGRQLHANVIKLDCVSDPFVG--TSLVDMYAKCGNIEDAYRLFKKMNV 556
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/491 (40%), Positives = 301/491 (61%), Gaps = 5/491 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++HG +K G R++ L+++YGKCG+ + +++FDE DV + +I
Sbjct: 176 GQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHM-DVASCNALIAGLS 234
Query: 62 EHGLVENAFEVFSRVKVK----DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ V A +F + + V WT+++ V+NG+ A++ FREMQ PN V
Sbjct: 235 RNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSV 294
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
TI CVL A + + AL GR H + + + V AL++MY++CG + A +F+ M
Sbjct: 295 TIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTM 354
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
R+V ++N++I G AM+G ++ AV MF M+ +P VTF +L AC+ GL + G
Sbjct: 355 VSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGR 414
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F+ M +YG+ P++EHY C+V LL R G+ +EAYD I++M PD + GSLL +C++
Sbjct: 415 HYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRV 474
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
HG + L E A++L ++G YVLLSN YAS W ++R MK+ G++KE GCS
Sbjct: 475 HGNVDLAEVAAEKLFHLEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCS 534
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IE+ N++H + GD HP I +K+ +L ++ G+ PST+ VLHD+E+ EK+ L
Sbjct: 535 WIEIKNKVHMLLAGDDSHPMMTAIIEKINQLNIQMRKLGFVPSTDFVLHDVEEQEKDDIL 594
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
A+HSE+LA+ GLIST P TT+RV+KNLR+C DCH +K I++ R+I VRD NRFHHF
Sbjct: 595 AVHSEKLAVALGLISTSPGTTLRVIKNLRICGDCHEAMKFISSFEGREISVRDTNRFHHF 654
Query: 478 ENGTCSCGDYW 488
G CSCGD+W
Sbjct: 655 SGGKCSCGDFW 665
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 8/273 (2%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN-DVVASTVMINCY 60
R +H GL + L+ Y + G +A LFD MP VV + ++ +
Sbjct: 36 ARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARALFDGMPRPQRTVVGWSALVAAH 95
Query: 61 VEHGLVENAFEVFSRVKV-----KDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV-RP 114
G E A+ + ++ + + W ++ GL R+G A+ M + + RP
Sbjct: 96 AARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRP 155
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
+ + C LSA +G + +G+ +H Y K + V ALI+MY +CG + ++VF
Sbjct: 156 DATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVF 215
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
+E DV + N+LIAGL+ + + EA+ +F+E +++G+ V++ ++ C G
Sbjct: 216 DESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDL 275
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
E F+ M + G EP C++ + V
Sbjct: 276 EAVEFFREM-QAQGTEPNSVTIPCVLPAFANVA 307
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/490 (40%), Positives = 305/490 (62%), Gaps = 34/490 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+EIHG ++ G + L+++Y KC + E+ C
Sbjct: 217 KGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQV--------ELSVC------------- 255
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
AF + S +D + W ++I G V+NG + L FR M ++ V+P +V+
Sbjct: 256 --------AFHLLSN---RDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFS 304
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE--EMK 178
V+ AC+ L AL LG+ +H+Y+ + D N + +L++MY++CG+I A +F EM
Sbjct: 305 SVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMC 364
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
+RD+ ++ ++I G AMHG +++AV +F EM+ G++P V F+ VL ACSH GLVD G++
Sbjct: 365 DRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWK 424
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
F SM RD+G+ P +EHY + DLL R GR EEAYDFI+NM P + +LL+AC+ H
Sbjct: 425 YFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAH 484
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
++L E++ ++L + G +V++SN Y+++ +W++A ++R +M++ G++K P CS
Sbjct: 485 KNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQRWRDAAKLRVRMRKTGLKKTPACSW 544
Query: 359 IEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALA 418
IEV N++H F+ GD HP ++I + + L + ++ EGY T VLHD+++ K L
Sbjct: 545 IEVGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTNEVLHDVDEEHKRDLLR 604
Query: 419 IHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFE 478
HSERLAI +G+IST TTIRV+KN+RVC DCH+ IK +A I R+IIVRD +RFHHF+
Sbjct: 605 THSERLAIAFGIISTTSGTTIRVIKNIRVCVDCHTAIKFMAKIVGREIIVRDNSRFHHFK 664
Query: 479 NGTCSCGDYW 488
NG+CSCGDYW
Sbjct: 665 NGSCSCGDYW 674
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 152/299 (50%), Gaps = 12/299 (4%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
+ +H V++LG + T L+ +Y K F + E P+ + +
Sbjct: 95 AQSLHAAVIRLGFHFDLYTANALMNMYSK---FHPHLSPLHEFPQARHNHNNKYSVK--- 148
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+++ ++F R+ V+D V W +I G +NG AL++ +EM ++N+RP+ T+
Sbjct: 149 ----IDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSS 204
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L ++ + G+ IH Y +H D + +G +LI+MY++C ++ ++ F + RD
Sbjct: 205 ILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRD 264
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
++NS+IAG +GR + + FR M+ + ++P +V+F V+ AC+H ++LG ++
Sbjct: 265 AISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHA 324
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAP-DHIMLGSLLSACKIHG 299
+ R G + ++D+ ++ G + A +++ D + +++ C +HG
Sbjct: 325 YIIR-LGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHG 382
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 139/351 (39%), Gaps = 61/351 (17%)
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
+TV+ C+V+ +A V + ++ W +I +G + +L F ++ +
Sbjct: 16 NTVVPTCHVKQ---LHAQIVKTTKATPHSLAWICIIKCYASHGLLRHSLASFNLLRSFGI 72
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD------ 166
P+ +L A + L + +H+ + + + AL+NMYS+
Sbjct: 73 SPDRHLFPSLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLH 132
Query: 167 ----------------IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
ID ++F+ M RDV ++N++IAG A +G EA+ M +EM
Sbjct: 133 EFPQARHNHNNKYSVKIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGK 192
Query: 211 QGIRPTKVTFVGVLNACS-----------HGGLVDLGFE----IFQSMTRDYGIEPQIEH 255
+ +RP T +L + HG + GF+ I S+ Y Q+E
Sbjct: 193 ENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVEL 252
Query: 256 YGCIVDLLS---------------RVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKI 297
C LLS + GR ++ F M K+ P + S++ AC
Sbjct: 253 SVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAH 312
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVL--LSNAYASSGKWKEAVQIRAKMK 346
L LG+Q+ ++ D ++ L + YA G K A I K++
Sbjct: 313 LTALNLGKQLHAYIIRL-GFDDNKFIASSLLDMYAKCGNIKMARYIFNKIE 362
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/485 (41%), Positives = 283/485 (58%), Gaps = 32/485 (6%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
IHG +K G+ N + +Y K E A LFDE PE
Sbjct: 331 SIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPE----------------- 373
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
K V W AMI G +NG A+ LF+EM + PN VTI +L
Sbjct: 374 ---------------KTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTIL 418
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
SAC+QLG+L G+W+H + ++ N V AL++MY++CG+I +A Q+F+ M E++
Sbjct: 419 SACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTV 478
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
T+N++I G +HG EA++++ EM++ G P+ VTF+ VL ACSH GLV G EIF +M
Sbjct: 479 TWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNM 538
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQL 303
Y IEP IEHY C+VD+L R G+ E+A +FI M + P + G+LL AC IH +
Sbjct: 539 VNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDI 598
Query: 304 GEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNN 363
++RL + G YVLLSN Y+ + +A IR +K+ + K PGC+ IEVN
Sbjct: 599 ARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNG 658
Query: 364 EIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSER 423
H F+ GD H IY K+++L ++ GY T LHD+E+ EKE A+ +HSE+
Sbjct: 659 TPHVFVSGDRSHSHATDIYAKLEKLTGKMREMGYQAETVPALHDVEEEEKELAVNVHSEK 718
Query: 424 LAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCS 483
LAI +GLI+T+P IR++KNLRVC DCH+ K I+ IT+R I+VRD NRFHHF++G CS
Sbjct: 719 LAIAFGLITTEPGNEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICS 778
Query: 484 CGDYW 488
CGDYW
Sbjct: 779 CGDYW 783
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 176/393 (44%), Gaps = 52/393 (13%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
++V + +++ Y + V A +VF + +DTV W MI+GLV+N ++ LFREM
Sbjct: 141 SNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREM 200
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
D VR + T+ VL A ++L L++G I K V LI++YS+CGD+
Sbjct: 201 VADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDV 260
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN-- 225
+ A +F + D+ YN++I+G +G + +V++FRE++ G R + T VG++
Sbjct: 261 NTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLH 320
Query: 226 --------ACS-HGGLVDLGFEIFQSMTR-------------------DYGIEPQIEHYG 257
ACS HG V G + +++ D E + +
Sbjct: 321 SPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWN 380
Query: 258 CIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC 314
++ ++ G E A M + P+ + + ++LSAC G L G+ + L+
Sbjct: 381 AMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWV-HHLIKS 439
Query: 315 RSADSGTYV--LLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGD 372
+ + YV L + YA G EA Q+ M E +++ N I + L
Sbjct: 440 ENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEK--------NTVTWNTMIFGYGLHG 491
Query: 373 IRHPQREQIYKKMQELKQIVKLEGYSPSTEVVL 405
H + ++Y +M L GY+PS L
Sbjct: 492 YGH-EALKLYNEMLHL-------GYNPSAVTFL 516
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 85/198 (42%), Gaps = 38/198 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H + L N LV++Y KCG +A QLFD M E
Sbjct: 430 GKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSE--------------- 474
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K+TV W MI G +G AL L+ EM P+ VT +
Sbjct: 475 -----------------KNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLS 517
Query: 122 VLSACSQLGALELGRWI-HSYMGKHRID--LNHIVGGALINMYSRCGDIDKALQVFEEMK 178
VL ACS G + G I H+ + K+RI+ + H ++++ R G ++KAL+ ++M
Sbjct: 518 VLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHY--ACMVDILGRSGQLEKALEFIKKMP 575
Query: 179 -ERDVTTYNSLIAGLAMH 195
E + +L+ +H
Sbjct: 576 VEPGPAVWGTLLGACMIH 593
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 186/440 (42%), Positives = 293/440 (66%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV + +I+ Y + V+++ VF + D + W ++I G V+NG L F++M
Sbjct: 270 DVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQML 329
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
++PN V+ ++ AC+ L L LG+ +H Y+ + R D N + AL++MY++CG+I
Sbjct: 330 IAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIR 389
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +F++M+ D+ ++ ++I G A+HG + +A+ +F+ M +G++P V F+ VL ACS
Sbjct: 390 TARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACS 449
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLVD ++ F SMT+DY I P +EHY + DLL RVGR EEAY+FI++M I P +
Sbjct: 450 HAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVW 509
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+LL+AC++H ++L E+++K+L + G YVLLSN Y+++G+WK+A ++R M++
Sbjct: 510 STLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDK 569
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
G++K+P CS IE+ N++H F+ GD HP ++I + ++ L + ++ EGY T VLHD+
Sbjct: 570 GMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDV 629
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
E+ +K + L HSERLAI +G+IST TTIRV KNLRVC DCH+ K I+ I R+I+V
Sbjct: 630 EEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISKIVGREIVV 689
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD +RFHHF++G CSCGD+W
Sbjct: 690 RDNSRFHHFKDGKCSCGDFW 709
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 157/313 (50%), Gaps = 11/313 (3%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDA---MQLFDEMPECNDVVASTVMIN 58
G +HG +++LG+ + T L+ +Y K ++ ++FDE + +DV + +
Sbjct: 125 GESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDE-GKTSDVYSKKEKES 183
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVT 118
Y+ G + FE+ + +D V W +I G +NG AL + REM ++RP+ T
Sbjct: 184 YYL--GSLRKVFEMMPK---RDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFT 238
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
+ VL ++ L G+ IH Y ++ D + +G +LI+MY++C +D + +VF +
Sbjct: 239 LSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLP 298
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
+ D ++NS+IAG +G E ++ F++M+ I+P V+F ++ AC+H + LG +
Sbjct: 299 QHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQ 358
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
+ + R + + +VD+ ++ G A M++ D + +++ +H
Sbjct: 359 LHGYIIRS-RFDGNVFIASALVDMYAKCGNIRTARWIFDKMELY-DMVSWTAMIMGYALH 416
Query: 299 GKLQLGEQIAKRL 311
G + KR+
Sbjct: 417 GHAYDAISLFKRM 429
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 155/415 (37%), Gaps = 107/415 (25%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+ +++H Q+L+ L S S ++ +Y D++ +F+ +P +A +I CY
Sbjct: 23 QAKQLHAQILRTSLPSP-SLLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCY 81
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HGL +L F +M P+
Sbjct: 82 TSHGL-------------------------------FLHSLSFFIQMLASGKYPDHNVFP 110
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA---------- 170
VL +C+ + L G +H + + + + AL+NMYS+ +++
Sbjct: 111 SVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEG 170
Query: 171 -------------------LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ 211
+VFE M +RD+ ++N++I+G A +G +A+ M REM N
Sbjct: 171 KTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNA 230
Query: 212 GIRPTKVTFVGVLNACS-----------HGGLVDLGFE---------------------- 238
+RP T VL + HG + G++
Sbjct: 231 DLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDS 290
Query: 239 --IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLS 293
+F + + GI GC+ + G +E F M KI P+H+ S++
Sbjct: 291 CRVFYMLPQHDGISWNSIIAGCVQN-----GMFDEGLKFFQQMLIAKIKPNHVSFSSIMP 345
Query: 294 ACKIHGKLQLGEQIAKRLLDCRSADSGTYV--LLSNAYASSGKWKEAVQIRAKMK 346
AC L LG+Q+ ++ R D ++ L + YA G + A I KM+
Sbjct: 346 ACAHLTTLHLGKQLHGYIIRSR-FDGNVFIASALVDMYAKCGNIRTARWIFDKME 399
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 192/491 (39%), Positives = 304/491 (61%), Gaps = 5/491 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLK----LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMI 57
G+ +HGQ ++L L LV LY K G+ A ++FD M DVV+ ++
Sbjct: 315 GKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSM-TLKDVVSWNTIL 373
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y+E G ++NA +F + K + W M+ G V G AL LF +M+ ++V+P +
Sbjct: 374 SGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDY 433
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T ++AC +LGAL+ G+ +H+++ + + ++ G AL+ MY+RCG + A VF M
Sbjct: 434 TYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVM 493
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
D ++N++I+ L HG EA+E+F +M+ QGI P +++F+ +L AC+H GLVD GF
Sbjct: 494 PNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGF 553
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
+ F+SM RD+GI P +HY ++DLL R GR EA D I M P + ++LS C+I
Sbjct: 554 QYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRI 613
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
+G ++LG A +L GTY+LLSN Y+++G+W +A ++R M++ GV+KEPGCS
Sbjct: 614 NGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCS 673
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IEV N++H F++GD +HP ++Y+ ++ + ++ GY P T+ L D+ EKE+ L
Sbjct: 674 WIEVGNKVHVFLVGDTKHPDAHEVYRFLEMVGAKMRKLGYVPDTKFALQDMAPHEKEYVL 733
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSERLA+ +GL+ T+ V+KNL++C DCH+ + ++ R+I+VRD RFHHF
Sbjct: 734 FAHSERLAVSFGLLKLPAGATVTVLKNLKICGDCHTAMMFMSRAVGREIVVRDVRRFHHF 793
Query: 478 ENGTCSCGDYW 488
++G CSCG+YW
Sbjct: 794 KDGECSCGNYW 804
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 167/344 (48%), Gaps = 48/344 (13%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKC---GEFKDAMQLFDEMPECNDVVASTVMINCY 60
++H V KLG + S L+ LY KC G +DA ++ DEMPE +++ +T+++ +
Sbjct: 182 QLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVG-H 240
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V G V A F + + V W AMI G V++G A A +LFR M + P+E T
Sbjct: 241 VRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFT 300
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDL----NHIVGGALINMYSRCGDIDKALQVFEE 176
+LSAC+ G G+ +H + + D V AL+ +YS+ G I A ++F+
Sbjct: 301 SLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDS 360
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
M +DV ++N++++G G A +F+EM + ++++++ +++ HGGL +
Sbjct: 361 MTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYK----SELSWMVMVSGYVHGGLAEDA 416
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
++F M R ++P C D+ G+ ++AC
Sbjct: 417 LKLFNQM-RSEDVKP------C-------------------------DYTYAGA-VAACG 443
Query: 297 IHGKLQLGEQIAKRLLDC--RSADSGTYVLLSNAYASSGKWKEA 338
G L+ G+Q+ L+ C +++S LL+ YA G K+A
Sbjct: 444 ELGALKHGKQLHAHLVQCGFEASNSAGNALLT-MYARCGAVKDA 486
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 167/396 (42%), Gaps = 53/396 (13%)
Query: 3 REIHGQVLKLGLRSNRS---TRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINC 59
R +H ++L L + S L+L+ LY + LF P VA+T +++
Sbjct: 42 RCLHARLLTAALLHDPSHPHLTLRLLHLYTLSPDLATPAVLFRADP---GPVAATSLVSA 98
Query: 60 YVEHGLVENAFEVFSRVKV--KDTVCWTAMIDGLVRNGEMARALDLFREM--QRDNVRPN 115
Y G + ++ F V V +DTV AMI R A A+ +FR + D++RP+
Sbjct: 99 YAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASDDSLRPD 158
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHI--VGGALINMYSRC--------- 164
+ + +LSA Q+ L + + H++ + V ALI +Y +C
Sbjct: 159 DYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDA 218
Query: 165 -------------------------GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSI 199
GD+ A FEE+ +N++I+G G
Sbjct: 219 RKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCA 278
Query: 200 EAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI---FQSMTRDYGIEPQIEHY 256
EA E+FR M+++ I P + TF +L+AC++ G G + F + D+ E +
Sbjct: 279 EAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVN 338
Query: 257 GCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRS 316
+V L S+ G+ A +M + D + ++LS G L +I K +
Sbjct: 339 NALVTLYSKSGKIAVATKIFDSMTLK-DVVSWNTILSGYIESGCLDNAARIFKEM---PY 394
Query: 317 ADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
+++++ + Y G ++A+++ +M+ V+
Sbjct: 395 KSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKP 430
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/459 (42%), Positives = 297/459 (64%), Gaps = 1/459 (0%)
Query: 30 KCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMID 89
K G K A++LF MP+ +V ST +I+ + ++G ++ A E+F ++ K+ V WT M+D
Sbjct: 262 KAGSMKKAVKLFKAMPKKENVSWST-LIDGFAKNGDMDRAMELFDQMPEKNVVSWTTMVD 320
Query: 90 GLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDL 149
G RNG+ +AL +F +M + VRPN TIV LSAC+++G LE G IH Y+ + + L
Sbjct: 321 GFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLHL 380
Query: 150 NHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
+G AL++MY++CG+I+ A +VF E +++ + T+ +I G A+HG S +A+ F++M+
Sbjct: 381 TEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQAIACFKQMM 440
Query: 210 NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRP 269
GI+P +V F+ +L AC H G VD+G F SM DY IEP ++HY IVD+L R G+
Sbjct: 441 FAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVDMLGRSGQL 500
Query: 270 EEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAY 329
+EA FI M + PD ++ G+L AC+ H K ++ + +LL +G Y+ LSNAY
Sbjct: 501 KEALRFIERMPMNPDFVIWGALFCACRAHKKTKMAKFALNKLLKLEPTHTGNYIFLSNAY 560
Query: 330 ASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELK 389
A+ G+W++A ++R M+ GV K G S IEV ++H F+ GD H + I K++E+
Sbjct: 561 AALGQWEDAERVRVLMQNRGVHKNSGWSCIEVEGQVHRFVSGDHDHKDSKAICLKLEEIM 620
Query: 390 QIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCN 449
+GY P TE VLH++E EKE L H E+LA+ + LI T P TIR+VKNL+VC
Sbjct: 621 AGAVKQGYIPGTEWVLHNMEQEEKEDVLGSHGEKLALAFALICTSPGMTIRIVKNLQVCG 680
Query: 450 DCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
DCHS++K + I++R+I++RD RFHHF++G+CSC D+W
Sbjct: 681 DCHSLMKYASKISQREIMLRDMKRFHHFKDGSCSCRDHW 719
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 123/256 (48%), Gaps = 17/256 (6%)
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
+ ++ VF+ K K+ + A+I GL N A+ FR M R ++P+ +T VL +
Sbjct: 129 INHSLAVFNHHKPKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGIKPDRLTYPFVLKS 188
Query: 126 CSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER----- 180
+ L + ELG IH + + I+L+ V +L++MY + + A +VF+E ER
Sbjct: 189 MAGLFSTELGMAIHCMILRCGIELDSFVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGS 248
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+N LI G G +AV++F+ M + V++ +++ + G +D E+F
Sbjct: 249 SALLWNVLIKGCCKAGSMKKAVKLFKAMPKK----ENVSWSTLIDGFAKNGDMDRAMELF 304
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKI 297
M E + + +VD SR G E+A + M + P+ + S LSAC
Sbjct: 305 DQMP-----EKNVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAK 359
Query: 298 HGKLQLGEQIAKRLLD 313
G L+ G +I K + D
Sbjct: 360 IGGLEAGLRIHKYIKD 375
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 100/220 (45%), Gaps = 14/220 (6%)
Query: 138 IHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR 197
IH+ + H + + ++ LI+ S I+ +L VF K +++ T+N+LI GL +
Sbjct: 100 IHAQIIIHNLSSSSLITTQLISSSSLRKSINHSLAVFNHHKPKNLFTFNALIRGLTTNSH 159
Query: 198 SIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYG 257
A+ FR M+ GI+P ++T+ VL + + +LG I M GIE
Sbjct: 160 FFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFSTELGMAI-HCMILRCGIELDSFVRV 218
Query: 258 CIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGS-------LLSACKIHGKLQLGEQIAKR 310
+VD+ +V + A+ +P+ GS L+ C G ++ ++ K
Sbjct: 219 SLVDMYVKVEKLGSAFKVFDE---SPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFKA 275
Query: 311 LLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
+ ++ ++ L + +A +G A+++ +M E V
Sbjct: 276 M---PKKENVSWSTLIDGFAKNGDMDRAMELFDQMPEKNV 312
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/489 (42%), Positives = 312/489 (63%), Gaps = 2/489 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN-DVVASTVMINCY 60
G++IH +L+ ++ + L+ +Y K G + A + + N +++A T +++ Y
Sbjct: 294 GKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGY 353
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ G V+ A E+F++++ +D V WTAMI G V+NG AL+LFR M + PN T+
Sbjct: 354 TKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLA 413
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE-EMKE 179
+LS S L LE G+ IH+ K V ALI MY++ G+I+ A +VF+ +
Sbjct: 414 AMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGK 473
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+++ ++ S+I LA HG EA+ +F M++ G++P +T+VGVL+AC+H GLV+ G +
Sbjct: 474 KEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKY 533
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+ MT + IEP + HY C++DL R G +EAY FI +M I PD+I GSLL++CKIH
Sbjct: 534 YNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHK 593
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
L + A+RLL +SG Y+ L+N Y++ GKW+ A Q R MK+ GV+KE G S I
Sbjct: 594 NADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWI 653
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
+ NE+H F + D+ HPQ+++IYK M E+ + +K G+ P TE VLHD+E+ KE L
Sbjct: 654 HIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKY 713
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GL++T T +R++KNLRVCNDCHS IK I+ + R+IIVRD RFHHF++
Sbjct: 714 HSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKD 773
Query: 480 GTCSCGDYW 488
G+CSC DYW
Sbjct: 774 GSCSCRDYW 782
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 185/399 (46%), Gaps = 56/399 (14%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H Q++K GL L+ Y K G + A +FDEMP + +I+ Y
Sbjct: 29 GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP-LKSTFSWNTLISGYA 87
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G E + + + D V WTA+I G + G A+ +F +M + V P++ T+
Sbjct: 88 KQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSN 147
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD--------------- 166
VLS+C+ L++GR IHS++ K + V +L+NMY++CGD
Sbjct: 148 VLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKN 207
Query: 167 ----------------IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
+ A FE+M +RD+ ++NS+I+G + G ++EA+ +F +M+N
Sbjct: 208 ISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLN 267
Query: 211 Q-GIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI----VDLLSR 265
+ ++P T +L+AC++ +++G +I Y + + E G + + + ++
Sbjct: 268 EPSLKPDNFTLASILSACANLEKLNIGKQI-----HAYILRAETETSGAVGNALISMYAK 322
Query: 266 VGRPEEA-----YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG 320
G E A ++ +N+ I I SLL G ++ +I +L R D
Sbjct: 323 SGGVEIARLIVEHNRTSNLNI----IAFTSLLDGYTKLGNVKPAREIFNKL---RDRDVV 375
Query: 321 TYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+ + Y +G W +A+++ M G EP ++
Sbjct: 376 AWTAMIVGYVQNGLWNDALELFRLMVNEG--PEPNSYTL 412
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/489 (42%), Positives = 312/489 (63%), Gaps = 2/489 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN-DVVASTVMINCY 60
G++IH +L+ ++ + L+ +Y K G + A + + N +++A T +++ Y
Sbjct: 294 GKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGY 353
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ G V+ A E+F++++ +D V WTAMI G V+NG AL+LFR M + PN T+
Sbjct: 354 TKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLA 413
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE-EMKE 179
+LS S L LE G+ IH+ K V ALI MY++ G+I+ A +VF+ +
Sbjct: 414 AMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGK 473
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+++ ++ S+I LA HG EA+ +F M++ G++P +T+VGVL+AC+H GLV+ G +
Sbjct: 474 KEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKY 533
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+ MT + IEP + HY C++DL R G +EAY FI +M I PD+I GSLL++CKIH
Sbjct: 534 YNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHK 593
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
L + A+RLL +SG Y+ L+N Y++ GKW+ A Q R MK+ GV+KE G S I
Sbjct: 594 NADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWI 653
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
+ NE+H F + D+ HPQ+++IYK M E+ + +K G+ P TE VLHD+E+ KE L
Sbjct: 654 HIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKY 713
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GL++T T +R++KNLRVCNDCHS IK I+ + R+IIVRD RFHHF++
Sbjct: 714 HSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKD 773
Query: 480 GTCSCGDYW 488
G+CSC DYW
Sbjct: 774 GSCSCRDYW 782
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 185/399 (46%), Gaps = 56/399 (14%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H Q++K GL L+ Y K G + A +FDEMP + +I+ Y
Sbjct: 29 GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP-LKSTFSWNTLISGYA 87
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G E + + + D V WTA+I G + G A+ +F +M + V P++ T+
Sbjct: 88 KQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSN 147
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD--------------- 166
VLS+C+ L++GR IHS++ K + V +L+NMY++CGD
Sbjct: 148 VLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKN 207
Query: 167 ----------------IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
+ A FE+M +RD+ ++NS+I+G + G ++EA+ +F +M+N
Sbjct: 208 ISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLN 267
Query: 211 Q-GIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI----VDLLSR 265
+ ++P T +L+AC++ +++G +I Y + + E G + + + ++
Sbjct: 268 EPSLKPDNFTLASILSACANLEKLNIGKQI-----HAYILRAETETSGAVGNALISMYAK 322
Query: 266 VGRPEEA-----YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG 320
G E A ++ +N+ I I SLL G ++ +I +L R D
Sbjct: 323 SGGVEIARLIVEHNRTSNLNI----IAFTSLLDGYTKLGNVKPAREIFNKL---RDRDVV 375
Query: 321 TYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+ + Y +G W +A+++ M G EP ++
Sbjct: 376 AWTAMIVGYVQNGLWNDALELFRLMVNEG--PEPNSYTL 412
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/440 (44%), Positives = 287/440 (65%), Gaps = 1/440 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV +I+ Y + G V +A EVF ++ V+D V W +M+ +NG L L EM
Sbjct: 210 DVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMV 269
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+RP E T+V +SA + AL GR +H + + + V AL++MY++CG +
Sbjct: 270 LTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVR 329
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +FE + + V ++N++I G AMHG + EA+++F EM N+ +P +TFVGVL+ACS
Sbjct: 330 VARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEM-NRVAKPDHITFVGVLSACS 388
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
HGGL++ G+ F++M RDY I+P ++HY C+VDLL GR +EAY+ I MK+ PD +
Sbjct: 389 HGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVW 448
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
G+LL++CKIH ++LGE +RL++ D+G YV+LSN YA +GKW+ ++R M +
Sbjct: 449 GALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDR 508
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
++K CS IEV N++H F+ GD HP ++IY +++ + ++K GYSPST V HD+
Sbjct: 509 RLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDV 568
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
ED EK + HSERLAI +GLIST P T + + KNLR+C DCH IK I+ IT+R+I V
Sbjct: 569 EDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITV 628
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD NR+HHF++G CSCGDYW
Sbjct: 629 RDVNRYHHFKDGVCSCGDYW 648
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 183/404 (45%), Gaps = 54/404 (13%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D V +T ++N Y + +A +F R+ + W +I G NG A+ L+ +M
Sbjct: 109 DTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMF 168
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ P+ T VL AC+ L A+E GR IH ++ + + + VG ALI+MY++CG +
Sbjct: 169 DYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVG 228
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +VF+++ RD +NS++A + +G + + EM+ G+RPT+ T V ++A +
Sbjct: 229 SAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASA 288
Query: 229 -----------HG---------------GLVDL-----GFEIFQSMTRDYGIEPQIEHYG 257
HG LVD+ + +++ G++ ++ +
Sbjct: 289 DNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVK-RVVSWN 347
Query: 258 CIVDLLSRVGRPEEAYDFITNM-KIA-PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR 315
++ + G EA D M ++A PDHI +LSAC G L+ G + ++
Sbjct: 348 AMITGYAMHGHATEALDLFEEMNRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDY 407
Query: 316 SADSGT--YVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNN-EIHEFI-LG 371
D Y + + SG+ EA + +MK V + G +N+ +IH + LG
Sbjct: 408 KIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMK---VLPDSGVWGALLNSCKIHANVELG 464
Query: 372 DIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
+I L+++++LE V+L +I +W
Sbjct: 465 EI-------------ALERLIELEPDDAGNYVILSNIYAQAGKW 495
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 121/271 (44%), Gaps = 20/271 (7%)
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
+ P +L +C A++ G+ +H+ + + ++ L+N+Y C + A
Sbjct: 71 LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
+F+ + + ++ +N LI G A +G AV+++ +M + G+ P TF VL AC+
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALS 190
Query: 232 LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSR---VGRPEEAYDFITNMKIAPDHIML 288
++ G EI + + + G E + ++D+ ++ VG E +D I + D ++
Sbjct: 191 AIEHGREIHEHVVQT-GWEKDVFVGAALIDMYAKCGCVGSAREVFDKI----LVRDAVLW 245
Query: 289 GSLLSACKIHGK----LQLGEQIAKRLLDCRSADSGTYVLLS--NAYASSGK------WK 336
S+L+A +G L L ++ L A T + S NA G+ W+
Sbjct: 246 NSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWR 305
Query: 337 EAVQIRAKMKEAGVQKEPGCSSIEVNNEIHE 367
+ + K+K A V C S+ V + E
Sbjct: 306 QEFESHDKVKTALVDMYAKCGSVRVARNLFE 336
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 84/198 (42%), Gaps = 35/198 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GRE+HG + S+ + LV++Y KCG + A LF+ + VV+ MI Y
Sbjct: 295 QGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERL-GVKRVVSWNAMITGY 353
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
H G ALDLF EM R +P+ +T V
Sbjct: 354 AMH-------------------------------GHATEALDLFEEMNR-VAKPDHITFV 381
Query: 121 CVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
VLSACS G LE G + + + ++ID ++++ G +D+A + +MK
Sbjct: 382 GVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKV 441
Query: 180 -RDVTTYNSLIAGLAMHG 196
D + +L+ +H
Sbjct: 442 LPDSGVWGALLNSCKIHA 459
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/484 (41%), Positives = 289/484 (59%), Gaps = 32/484 (6%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
IHG +KLG+ S+ S L +Y + E A QLFDE E
Sbjct: 154 IHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAE------------------ 195
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
K W AMI G +NG A+ LF+ MQ++NV PN VT+ +LS
Sbjct: 196 --------------KTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILS 241
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
AC+Q+GAL LG W+HS + +R + N V ALI+MY++CG I A ++F+ M E++ T
Sbjct: 242 ACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVT 301
Query: 185 YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT 244
+N++I+G +HG EA+++F +M++ ++PT +TF+ VL ACSH GLV G IF +M
Sbjct: 302 WNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMV 361
Query: 245 RDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLG 304
D+G EP EHY C+VD+L R G+ ++A +FI M + P + G+LL AC IH L
Sbjct: 362 HDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHKDTNLA 421
Query: 305 EQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNE 364
+++L + + G YVL+SN Y+ K+ +A +R K+ + K PGC+ IE+
Sbjct: 422 HVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLIEIGQV 481
Query: 365 IHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERL 424
H F GD HPQ + IY ++ +L + G+ T VLHD+E+ EKE + +HSE+L
Sbjct: 482 PHVFTSGDQSHPQSKAIYAELDKLTGKMTEAGFQTETTTVLHDLEEEEKELTMKVHSEKL 541
Query: 425 AICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSC 484
AI +GLIST+P IR++KNLRVC DCH+ K ++ ITKR I+VRD NRFHHF++G CSC
Sbjct: 542 AIAFGLISTEPGAEIRIIKNLRVCLDCHNWTKFLSKITKRVIVVRDANRFHHFKDGLCSC 601
Query: 485 GDYW 488
GDYW
Sbjct: 602 GDYW 605
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 152/327 (46%), Gaps = 6/327 (1%)
Query: 9 VLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPEC---NDVVASTVMINCYVEHGL 65
VL G R + +T + ++ + E K MQ+ +C + V T +I+ + + G
Sbjct: 22 VLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKCGFYSHVSLLTGLISLFSKCGE 81
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
VE A +F ++ KD + AMI G NGE ++ LF+E+ R + TIV ++
Sbjct: 82 VEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPV 141
Query: 126 CSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTY 185
S G L IH + K I + V AL +Y R ++ A Q+F+E E+ + ++
Sbjct: 142 YSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASW 201
Query: 186 NSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR 245
N++I+G +G + A+ +F+ M + P VT +L+AC+ G + LG E S+ +
Sbjct: 202 NAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLG-EWVHSLIK 260
Query: 246 DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGE 305
E + ++D+ ++ G A + M + + +++S +HG Q
Sbjct: 261 SNRFESNVYVSTALIDMYAKCGSITVARELFDLMP-EKNEVTWNAMISGYGLHGHGQEAL 319
Query: 306 QIAKRLLDCRSADSGTYVLLSNAYASS 332
++ +L +G LS YA S
Sbjct: 320 KLFYDMLSSSVKPTG-LTFLSVLYACS 345
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 78/197 (39%), Gaps = 36/197 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H + SN L+++Y KCG A +LFD MPE N+V
Sbjct: 252 GEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVT---------- 301
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
W AMI G +G AL LF +M +V+P +T +
Sbjct: 302 ----------------------WNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLS 339
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVG--GALINMYSRCGDIDKALQVFEEMK- 178
VL ACS G ++ G I M H + ++++ R G + KAL+ + M
Sbjct: 340 VLYACSHAGLVKEGDGIFHTM-VHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPV 398
Query: 179 ERDVTTYNSLIAGLAMH 195
E + +L+ +H
Sbjct: 399 EPGPPVWGALLGACMIH 415
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/462 (44%), Positives = 289/462 (62%), Gaps = 2/462 (0%)
Query: 28 YGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAM 87
Y + G ++A +LFD MP VVA MI + ++G V A +VF +++ KD W+AM
Sbjct: 243 YTQGGRIEEASELFDAMP-VKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAM 301
Query: 88 IDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRI 147
I R G AL+LF MQR+ V+ N +++ VLS C+ L +L+ GR +H+ + K +
Sbjct: 302 IKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQF 361
Query: 148 DLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
D + V LI MY +CGD+ KA Q+F+ +D+ +NS+I G A HG EA+++F E
Sbjct: 362 DSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHE 421
Query: 208 MINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
M + G+ VTFVGVL+ACS+ G V G EIF+SM Y +EP+ EHY C+VDLL R G
Sbjct: 422 MCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAG 481
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSN 327
+A D I M + D I+ G+LL AC+ H + L E AK+LL ++G Y+LLSN
Sbjct: 482 LVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSN 541
Query: 328 AYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILG-DIRHPQREQIYKKMQ 386
YAS G+W + ++R M+ V K PGCS IEV +H F G +HP+ I K ++
Sbjct: 542 IYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMFTGGVSTKHPELSSIMKMLE 601
Query: 387 ELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLR 446
+L +++ GY P + VLHD+++ EK +L HSERLA+ +GL+ IRV+KNLR
Sbjct: 602 KLDGMLREAGYYPDSSFVLHDVDEEEKVRSLGHHSERLAVAFGLLKVPEGMPIRVMKNLR 661
Query: 447 VCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
VC DCHS IKLIA IT R+II+RD NRFHHF++G CSC DYW
Sbjct: 662 VCGDCHSAIKLIAKITGREIILRDANRFHHFKDGFCSCRDYW 703
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 154/313 (49%), Gaps = 14/313 (4%)
Query: 36 DAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNG 95
+A LFD MP DVVA T MI+ Y + G + A E+F + ++ + WT MI G V+NG
Sbjct: 158 EARGLFDIMP-VKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNG 216
Query: 96 EMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGG 155
++ A LF M NEV+ +L +Q G +E + M + +
Sbjct: 217 QVDVARKLFEVMPEK----NEVSWTAMLMGYTQGGRIEEASELFDAMPVKAV----VACN 268
Query: 156 ALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRP 215
A+I + + G++ KA QVF++++E+D T++++I G +EA+ +F M +G++
Sbjct: 269 AMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQS 328
Query: 216 TKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDF 275
+ + VL+ C+ +D G ++ + + + + ++ + + G +A
Sbjct: 329 NFPSLISVLSVCASLASLDHGRQVHAELVKSQ-FDSDVFVASVLITMYVKCGDLVKARQI 387
Query: 276 ITNMKIAP-DHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG-TYVLLSNAYASSG 333
+ +P D +M S+++ HG ++ Q+ + A G T+V + +A + +G
Sbjct: 388 FD--RFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTG 445
Query: 334 KWKEAVQIRAKMK 346
K KE ++I MK
Sbjct: 446 KVKEGLEIFESMK 458
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 149/328 (45%), Gaps = 30/328 (9%)
Query: 28 YGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAM 87
Y + G+ + A ++FDEMP+ +V+ M+ Y ++ A +F ++ ++TV W +
Sbjct: 26 YARIGQIESARRVFDEMPD-KGIVSWNSMVAGYFQNNRPREARYLFDKMPERNTVSWNGL 84
Query: 88 IDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRI 147
I G V+N ++ A F M NV V+ ++ Q G + + M + +
Sbjct: 85 ISGYVKNRMVSEARKAFDTMPERNV----VSWTAMVRGYVQEGLVSEAETLFWQMPEKNV 140
Query: 148 DLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
++ G LI + ID+A +F+ M +DV ++I+G GR EA E+F E
Sbjct: 141 VSWTVMLGGLIQVRR----IDEARGLFDIMPVKDVVARTNMISGYCQEGRLAEARELFDE 196
Query: 208 MINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
M + + +++ +++ G VD+ ++F+ M E + ++ ++ G
Sbjct: 197 MPRRNV----ISWTTMISGYVQNGQVDVARKLFEVMP-----EKNEVSWTAMLMGYTQGG 247
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSACK--IHGKLQLGE-QIAKRLLD-CRSADSGTYV 323
R EEA + M + + AC I G Q GE A+++ D R D GT+
Sbjct: 248 RIEEASELFDAMPVKA--------VVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWS 299
Query: 324 LLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
+ Y G EA+ + A M+ GVQ
Sbjct: 300 AMIKVYERKGFEVEALNLFALMQREGVQ 327
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 34/196 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H +++K S+ L+ +Y KCG+ A Q+FD D+V +I Y
Sbjct: 349 GRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSP-KDIVMWNSIITGYA 407
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+HGLVE A +V F EM + + VT V
Sbjct: 408 QHGLVEEALQV-------------------------------FHEMCSSGMATDGVTFVG 436
Query: 122 VLSACSQLGALELGRWIHSYM-GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VLSACS G ++ G I M K+ ++ ++++ R G ++ A+ + ++M E
Sbjct: 437 VLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVE 496
Query: 180 RDVTTYNSLIAGLAMH 195
D + +L+ H
Sbjct: 497 ADAIIWGALLGACRTH 512
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 12/143 (8%)
Query: 158 INMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTK 217
I Y+R G I+ A +VF+EM ++ + ++NS++AG + R EA +F +M +
Sbjct: 23 IARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPER----NT 78
Query: 218 VTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFIT 277
V++ G+++ +V + F +M E + + +V + G EA
Sbjct: 79 VSWNGLISGYVKNRMVSEARKAFDTMP-----ERNVVSWTAMVRGYVQEGLVSEAETLFW 133
Query: 278 NM---KIAPDHIMLGSLLSACKI 297
M + +MLG L+ +I
Sbjct: 134 QMPEKNVVSWTVMLGGLIQVRRI 156
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/518 (40%), Positives = 309/518 (59%), Gaps = 31/518 (5%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINC-- 59
G ++H + GL S+ L+ +Y +C A ++FDEM E N V + ++ C
Sbjct: 125 GLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFR 184
Query: 60 ----------------------------YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGL 91
Y + G ++ A EVF ++ +KD V W+ MI G
Sbjct: 185 CEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGF 244
Query: 92 VRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH 151
NG A FRE++R+ +RPNEV++ VLSAC+Q GA E GR +H ++ K
Sbjct: 245 AHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQII 304
Query: 152 IVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ 211
V ALI+ YS+CG++D A VF+ M R ++ ++IAG+AMHG EA+ +F EM
Sbjct: 305 SVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEES 364
Query: 212 GIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEE 271
I+P +TF+ +L ACSH GLVDLG F M YGIEP IEHYGC+VDL R G+ ++
Sbjct: 365 NIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQ 424
Query: 272 AYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYAS 331
AYDF+ M I+P+ I+ +LL AC IHG L L Q+ ++L + +SG +VLLSN YA
Sbjct: 425 AYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVLLSNIYAV 484
Query: 332 SGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQI 391
+GKWK+ +R M ++K PG S IEVN I+ F+ G+ ++ + ++K++E+
Sbjct: 485 AGKWKDVAALRRSMTHQRLKKTPGWSMIEVNRIIYSFVAGEKQNDIAVEAHQKLREIMSR 544
Query: 392 VKLE-GYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCND 450
+++E GY P VLHDIE EKE +++ HSE+LA+ +G+ IRVVKNLR+C D
Sbjct: 545 LRIEGGYVPEVGSVLHDIEVEEKEDSVSQHSEKLAVAFGMAKLPRGRAIRVVKNLRICRD 604
Query: 451 CHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
CH+++KLI+ + + +I+VRDR+RFH F +G+CSC DYW
Sbjct: 605 CHTVMKLISKVYEVEIVVRDRSRFHSFTHGSCSCRDYW 642
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 105/501 (20%), Positives = 181/501 (36%), Gaps = 119/501 (23%)
Query: 19 STRLKLVELYGKCGEFKDAMQL----FDEMPECNDVVASTVMINCYVE-HGLVENAFEVF 73
S L + L+ KC + Q+ F +V+ ++++C V + A +F
Sbjct: 3 SRELHCLALFSKCKSLRTVKQIQALIFKTCLNSYPLVSGKLLLHCAVTLPDSLHYARRLF 62
Query: 74 SRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR-PNEVTIVCVLSACSQLGAL 132
++ D + +I GL + + AL LF EM+R +V P+ + +L A + AL
Sbjct: 63 LDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRAL 122
Query: 133 ELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE------------- 179
G +H + +D + VG LI+MY+ C + A +VF+EM E
Sbjct: 123 TNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAAC 182
Query: 180 ------------------RDVTTYNSLIAGLAMHGRSIEAVEMFREMI------------ 209
R++T++N ++AG G A E+F +M
Sbjct: 183 FRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIV 242
Query: 210 -------------------NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIE 250
+G+RP +V+ GVL+AC+ G + G I G
Sbjct: 243 GFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFG-RILHGFVEKSGFL 301
Query: 251 PQIEHYGCIVDLLSRVGRPEEAYDFITNM------------------------------- 279
I ++D S+ G + A NM
Sbjct: 302 QIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEM 361
Query: 280 ---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT--YVLLSNAYASSGK 334
I PD I S+L AC G + LG R+++ + Y + + Y +GK
Sbjct: 362 EESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGK 421
Query: 335 WKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKL 394
++A +M I N+ + +LG +Y Q +Q+ +L
Sbjct: 422 LQQAYDFVCQMP------------ISPNDIVWRTLLGAC--SIHGNLYLAGQVKRQLSEL 467
Query: 395 EGYSPSTEVVLHDIEDWEKEW 415
+ + V+L +I +W
Sbjct: 468 DPENSGDHVLLSNIYAVAGKW 488
>gi|115486527|ref|NP_001068407.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|108864631|gb|ABG22570.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645629|dbj|BAF28770.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|215694601|dbj|BAG89792.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215701272|dbj|BAG92696.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 610
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/488 (42%), Positives = 304/488 (62%), Gaps = 2/488 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H + + + LV++Y KCG D ++FD M N VV T +++ Y
Sbjct: 124 GRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVFDSMSAKNSVVW-TALVSGYA 182
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+G E A ++F + ++ WTA+I GLV GE A++LF EM+RD VR ++ ++
Sbjct: 183 SNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRRDGVRIDDAFVLS 242
Query: 122 -VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+ + L A LGR +H + N IVG ALI+MYS+C DI A +VFE + R
Sbjct: 243 IVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYSKCSDILSAREVFEGITFR 302
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++ +++ G A HGR+ EA+ ++ M+ G +P +VTFVG++ ACSH GLV G ++F
Sbjct: 303 DVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLF 362
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+SM +YGI P+++HY C +DLLSR G EA + +T M PD G+LLSAC +
Sbjct: 363 ESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYEPDEATWGALLSACTKYKD 422
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++ +I+ +LL+ R DS TY+LLSN YA +GKW ++R M ++KEPG S IE
Sbjct: 423 AEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWDSVAKVRKCMIGLEIRKEPGYSWIE 482
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
E F G++ RE+I ++E+ ++ GY P T V+HD+E+ EKE L +H
Sbjct: 483 AGREFRLFHAGEVPLDVREEIMVFLEEMVLEMRKRGYVPDTSSVMHDLEESEKEHHLFLH 542
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLA+ +GLI + P + IRVVKNLRVC DCH+++KLI+ IT RKI+VRD +RFHHFE G
Sbjct: 543 SERLAVAFGLIKSPPGSVIRVVKNLRVCVDCHTVMKLISEITHRKIVVRDSSRFHHFEGG 602
Query: 481 TCSCGDYW 488
CSC ++W
Sbjct: 603 KCSCSEFW 610
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 97/194 (50%), Gaps = 5/194 (2%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNV 112
+++ Y + L+ +A +F +D +++++ + + AL + R M D +
Sbjct: 42 AALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSASPELALPILRCMLSADAL 101
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
P+ I V S ++L + LGR +H++ + + +V +L++MY +CG D +
Sbjct: 102 HPDHFVISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRK 161
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
VF+ M ++ + +L++G A +GRS EA+++FR M + + G++N G
Sbjct: 162 VFDSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGA 221
Query: 233 VDLGFEIFQSMTRD 246
V E+F M RD
Sbjct: 222 V----ELFVEMRRD 231
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/489 (42%), Positives = 300/489 (61%), Gaps = 33/489 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR++H +KLGL N V +IN Y
Sbjct: 147 EGRQLHCLSMKLGLDDN--------------------------------VYVCPTLINMY 174
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
E V++A VF R+ VC+ AMI G R AL LFREMQ ++PNE+T++
Sbjct: 175 TECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLL 234
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLS+C+ LG+L+LG+WIH Y KH V ALI+M+++CG +D A+ +FE+M+ +
Sbjct: 235 SVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK 294
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++++I A HG++ +++ MF M ++ ++P ++TF+G+LNACSH G V+ G + F
Sbjct: 295 DTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYF 354
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
M +GI P I+HYG +VDLLSR G E+AY+FI + I+P ++ LL+AC H
Sbjct: 355 SQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNN 414
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
L L E++++R+ + + G YV+LSN YA + KW+ +R MK+ K PGCSSIE
Sbjct: 415 LDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIE 474
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH-DIEDWEKEWALAI 419
VNN +HEF GD ++++ + E+ + +KL GY P T +V+H ++ D EKE L
Sbjct: 475 VNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRY 534
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GL++T P TTIRVVKNLRVC DCH+ KLI+ I RK+++RD RFHHFE+
Sbjct: 535 HSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFED 594
Query: 480 GTCSCGDYW 488
G CSCGD+W
Sbjct: 595 GKCSCGDFW 603
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 153/325 (47%), Gaps = 8/325 (2%)
Query: 27 LYGKCGEFKDAMQL--FDEMPECNDVVASTVMINCYVE---HGLVENAFEVFSRVKVKDT 81
L KC ++ MQ+ + DV +IN E + A +F + D
Sbjct: 35 LISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDI 94
Query: 82 VCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSY 141
V + +M G R LF E+ D + P+ T +L AC+ ALE GR +H
Sbjct: 95 VIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCL 154
Query: 142 MGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEA 201
K +D N V LINMY+ C D+D A VF+ + E V YN++I G A R EA
Sbjct: 155 SMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEA 214
Query: 202 VEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVD 261
+ +FREM + ++P ++T + VL++C+ G +DLG I + + ++ ++D
Sbjct: 215 LSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWI-HKYAKKHSFCKYVKVNTALID 273
Query: 262 LLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL-LDCRSADSG 320
+ ++ G ++A M+ D +++ A HGK + + +R+ + D
Sbjct: 274 MFAKCGSLDDAVSIFEKMRYK-DTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEI 332
Query: 321 TYVLLSNAYASSGKWKEAVQIRAKM 345
T++ L NA + +G+ +E + ++M
Sbjct: 333 TFLGLLNACSHTGRVEEGRKYFSQM 357
>gi|297737119|emb|CBI26320.3| unnamed protein product [Vitis vinifera]
Length = 522
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/503 (41%), Positives = 312/503 (62%), Gaps = 23/503 (4%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
+++H ++ GL + + L + L F A+ +F+ +P + +T++ +
Sbjct: 26 KQVHAHMITTGLIFH-TYPLSRILLISSTIVFTHALSIFNHIPNPTIFLYNTLISSLANI 84
Query: 63 HGLVENAFEVFSRVKVKDTV-----------------CWTAMIDGLVRNGEMARALDLFR 105
AF ++SRV T+ W L+++ L LF
Sbjct: 85 KPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFKACGSQPWLRHDIFLIKS-----VLTLFI 139
Query: 106 EMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG 165
EMQ+ ++ NEVT+V ++SAC++LGAL G W H Y+ KH + LNH VG ALI+MYS+CG
Sbjct: 140 EMQKSLIKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTALIDMYSKCG 199
Query: 166 DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
+D A Q+F+++ RD YN++I G A+HG +A+++F++M +G+ P VT V +
Sbjct: 200 CLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPDDVTLVVTMC 259
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDH 285
+CSH GLV+ G ++F+SM YG+EP++EHYGC+VDLL R GR EA + + NM + P+
Sbjct: 260 SCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERVLNMPMKPNA 319
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
++ SLL A ++HG L++GE + K L+ SG YVLLSN YAS +W + ++R M
Sbjct: 320 VIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDDVKRVRKLM 379
Query: 346 KEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVL 405
K+ G+ K PG S +EV +HEF++GD HP+ ++IY K++E+ + + G+ P T VL
Sbjct: 380 KDHGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIYLKLEEMSRRLHEYGHKPRTLEVL 439
Query: 406 HDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRK 465
DIE+ EKE AL+ HSERLAI + LI++ IR++KNLRVC DCH+ KLI+ I +R+
Sbjct: 440 FDIEEEEKEDALSYHSERLAIAFALIASHHCAPIRIIKNLRVCGDCHTSSKLISKIYERE 499
Query: 466 IIVRDRNRFHHFENGTCSCGDYW 488
IIVRDRNRFHHF+ G CSC DYW
Sbjct: 500 IIVRDRNRFHHFKEGACSCSDYW 522
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 107/274 (39%), Gaps = 79/274 (28%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G H VLK L+ N L+++Y KCG A QLFD++P D + MI +
Sbjct: 168 QGAWAHVYVLKHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQLPH-RDTLCYNAMIGGF 226
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG +ALDLF++M + + P++VT+V
Sbjct: 227 AIHGYGH-------------------------------QALDLFKKMTLEGLAPDDVTLV 255
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-- 178
+ +CS +G +E G VFE MK
Sbjct: 256 VTMCSCSHVGLVEEG-----------------------------------CDVFESMKEV 280
Query: 179 ---ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
E + Y L+ L GR EA E ++N ++P V + +L A G +++
Sbjct: 281 YGVEPKLEHYGCLVDLLGRAGRLREAEE---RVLNMPMKPNAVIWRSLLGAARVHGNLEI 337
Query: 236 GFEIFQSMTRDYGIEPQIE-HYGCIVDLLSRVGR 268
G + + + + +EP+ +Y + ++ + + R
Sbjct: 338 GEVVLKHLIQ---LEPETSGNYVLLSNMYASINR 368
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/507 (41%), Positives = 304/507 (59%), Gaps = 55/507 (10%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
IHG +KLG + +R + L+++Y + G+ + +FD M
Sbjct: 422 IHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSM-------------------- 461
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR-DNV----------- 112
+V+D V W MI G V +G + AL L EMQR +N
Sbjct: 462 ------------EVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDE 509
Query: 113 -----RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+PN +T++ VL C+ L A+ G+ IH+Y ++ + + VG AL++MY++CG +
Sbjct: 510 KGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCL 569
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIR-----PTKVTFVG 222
+ + +VF EM ++V T+N LI MHG+ EA+E+F+ M+ + R P +VTF+
Sbjct: 570 NLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFIT 629
Query: 223 VLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIA 282
V ACSH GL+ G +F M D+G+EP +HY C+VDLL R G+ EEAY+ + M
Sbjct: 630 VFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAE 689
Query: 283 PDHI-MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQI 341
D + SLL AC+IH ++LGE AK LL + YVLLSN Y+S+G W +A+++
Sbjct: 690 FDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEV 749
Query: 342 RAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPST 401
R M++ GV+KEPGCS IE +E+H+F+ GD+ HPQ EQ++ ++ L + ++ EGY P T
Sbjct: 750 RKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDT 809
Query: 402 EVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANI 461
VLH++++ EKE L HSE+LAI +G+++T P TTIRV KNLRVCNDCH+ K I+ I
Sbjct: 810 SCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKI 869
Query: 462 TKRKIIVRDRNRFHHFENGTCSCGDYW 488
+R+IIVRD RFHHF+ GTCSCGDYW
Sbjct: 870 MEREIIVRDVRRFHHFKEGTCSCGDYW 896
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 146/334 (43%), Gaps = 74/334 (22%)
Query: 2 GREIHGQVLKLGLRSNRSTRLK-LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
G +IH +K G S+ T LV +YGKCG D +
Sbjct: 111 GEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCK--------------------- 149
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
VF R+ +D V W + I L R + +AL+ FR MQ +N+ + T+V
Sbjct: 150 -----------VFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLV 198
Query: 121 CVLSACSQLG---ALELGRWIHSYMGKHRI-DLNHIVGGALINMYSRCGDIDKALQVFEE 176
V ACS LG L LG+ +H Y R+ D AL+ MY++ G +D + +FE
Sbjct: 199 SVALACSNLGVMHGLRLGKQLHGY--SLRVGDQKTFTNNALMAMYAKLGRVDDSKALFES 256
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
+RD+ ++N++I+ + R EA+ FR M+ +G+ VT VL ACSH +D+G
Sbjct: 257 FVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVG 316
Query: 237 FEIFQSMTR-------------------------------DYGIEPQIEHYGCIVDLLSR 265
EI + R D+ + +IE + ++ +R
Sbjct: 317 KEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYAR 376
Query: 266 VGRPEEAYD-FITNMKIA---PDHIMLGSLLSAC 295
G E+A FI +K+A P+ + S++ AC
Sbjct: 377 NGLDEKALILFIEMIKVAGLLPNTTTMASVMPAC 410
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 143/313 (45%), Gaps = 61/313 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++HG L++G + T L+ +Y K G D+ LF+ +
Sbjct: 216 GKQLHGYSLRVGDQKT-FTNNALMAMYAKLGRVDDSKALFESFVD--------------- 259
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+D V W MI ++ + AL FR M + V + VTI
Sbjct: 260 -----------------RDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIAS 302
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDL--NHIVGGALINMYSRCGDIDKALQVFEEMKE 179
VL ACS L L++G+ IH+Y+ ++ DL N VG AL++MY C ++ +VF+ +
Sbjct: 303 VLPACSHLERLDVGKEIHAYVLRNN-DLIENSFVGSALVDMYCNCRQVESGRRVFDHILG 361
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMIN-QGIRPTKVTFVGVLNACS---------- 228
R + +N++I+G A +G +A+ +F EMI G+ P T V+ AC
Sbjct: 362 RRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKES 421
Query: 229 -HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
HG V LGF+ D ++ ++D+ SR+G+ + + +M++ D +
Sbjct: 422 IHGYAVKLGFK------EDRYVQ------NALMDMYSRMGKMDISETIFDSMEVR-DRVS 468
Query: 288 LGSLLSACKIHGK 300
++++ + G+
Sbjct: 469 WNTMITGYVLSGR 481
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 126/305 (41%), Gaps = 48/305 (15%)
Query: 79 KDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWI 138
+ T W + R+ + A+ + EM RP+ VL A S L L+ G I
Sbjct: 55 RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114
Query: 139 HSYMGKHRIDLNHI-VGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR 197
H+ K + + V L+NMY +CG I +VF+ + +RD ++NS IA L +
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEK 174
Query: 198 SIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYG 257
+A+E FR M + + + T V V ACS+ G++ +G+
Sbjct: 175 WEQALEAFRAMQMENMELSSFTLVSVALACSNLGVM-------------HGL-------- 213
Query: 258 CIVDLLSRVGRPEEAYDF-ITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRS 316
R+G+ Y + + K ++ ++ ++ L E R
Sbjct: 214 -------RLGKQLHGYSLRVGDQKTFTNNALMAMYAKLGRVDDSKALFESFVDR------ 260
Query: 317 ADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE--------PGCSSIE---VNNEI 365
D ++ + ++++ S ++ EA+ M GV+ + P CS +E V EI
Sbjct: 261 -DMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEI 319
Query: 366 HEFIL 370
H ++L
Sbjct: 320 HAYVL 324
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 118/256 (46%), Gaps = 34/256 (13%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+EIH ++ L S+ + LV++Y KCG + ++F+EMP N + + +++ C
Sbjct: 536 KGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACG 595
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ HG E A E+F M+ R GE +PNEVT +
Sbjct: 596 M-HGKGEEALELFKN-----------MVAEAGRGGE---------------AKPNEVTFI 628
Query: 121 CVLSACSQLGALELGRWIHSYMG-KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V +ACS G + G + M H ++ ++++ R G +++A ++ M
Sbjct: 629 TVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPA 688
Query: 180 R--DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVT-FVGVLNACSHGGLVDLG 236
V ++SL+ +H +++E E+ + + + P + +V + N S GL +
Sbjct: 689 EFDKVGAWSSLLGACRIH-QNVELGEVAAKNLLH-LEPNVASHYVLLSNIYSSAGLWNKA 746
Query: 237 FEIFQSMTRDYGIEPQ 252
E+ ++M R G++ +
Sbjct: 747 MEVRKNM-RQMGVKKE 761
>gi|413932592|gb|AFW67143.1| hypothetical protein ZEAMMB73_912965 [Zea mays]
Length = 619
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/443 (46%), Positives = 299/443 (67%), Gaps = 2/443 (0%)
Query: 48 NDVVASTVMINCYVEHG--LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
D S +I+ Y G + +A VF R+ V W+AMI G VR+G + A+ LFR
Sbjct: 177 TDQYVSNTLIHMYSCFGGEFLGDARNVFDRMAKSSAVTWSAMIGGYVRSGLSSDAVGLFR 236
Query: 106 EMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG 165
EMQ VRP+EVT++ VL+A + LGALEL RW+ ++ K I + + ALI+ ++CG
Sbjct: 237 EMQASGVRPDEVTMIGVLAAAADLGALELARWVGRFVEKEGIGKSVTLCNALIDALAKCG 296
Query: 166 DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
D+D A+ VF+ MKER + ++ S+I LAM GR EAV +F EM G+RP V F+GVL
Sbjct: 297 DLDGAMAVFQGMKERTIVSWTSVIDALAMEGRGKEAVAVFEEMKTAGVRPDDVAFIGVLT 356
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDH 285
ACSH G+VD G+ F+SM YGI+P+IEHYGC+VD+ R G E A +F+ M + P+
Sbjct: 357 ACSHAGMVDEGYGYFESMRMAYGIDPKIEHYGCMVDMFGRAGMVERAMEFVHKMPMKPNP 416
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
I+ +L++AC+ HG+L+LGE I + LL+ A YV+LSN YA + +WKE +IR +M
Sbjct: 417 IIWRTLVAACRAHGRLELGETITRNLLNEYPAHEANYVMLSNVYALTRRWKEKSEIRREM 476
Query: 346 KEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVL 405
+ G++K PGCS +E++ E+HEFI GD HPQ ++IY ++E+ + ++ G+ +T VL
Sbjct: 477 SKRGIKKVPGCSLVELDGEVHEFIAGDESHPQWKEIYMMVEEMARELRRAGHISATSEVL 536
Query: 406 HDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRK 465
D+++ +KE AL HSE+LAI + L+ T P T +RVVKNLRVC+DCH+ IK I+ + R+
Sbjct: 537 LDLDEEDKEVALQWHSEKLAIAFVLLRTPPGTQVRVVKNLRVCSDCHAAIKCISLVYNRE 596
Query: 466 IIVRDRNRFHHFENGTCSCGDYW 488
IIVRDR+RFH F+NG+CSC D+W
Sbjct: 597 IIVRDRSRFHRFKNGSCSCNDFW 619
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 100/246 (40%), Gaps = 47/246 (19%)
Query: 99 RALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALI 158
RA F M R PN+ T +L AC+ +G H+ K + V LI
Sbjct: 129 RAASFFPLMLRSATLPNKFTFPFLLKACAAFPG--VGVQAHAAALKFGFTTDQYVSNTLI 186
Query: 159 NMYSRCGD--IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPT 216
+MYS G + A VF+ M + T++++I G G S +AV +FREM G+RP
Sbjct: 187 HMYSCFGGEFLGDARNVFDRMAKSSAVTWSAMIGGYVRSGLSSDAVGLFREMQASGVRPD 246
Query: 217 KVTFVGV-----------------------------------LNACSHGGLVDLGFEIFQ 241
+VT +GV ++A + G +D +FQ
Sbjct: 247 EVTMIGVLAAAADLGALELARWVGRFVEKEGIGKSVTLCNALIDALAKCGDLDGAMAVFQ 306
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIA---PDHIMLGSLLSACKIH 298
M E I + ++D L+ GR +EA MK A PD + +L+AC
Sbjct: 307 GMK-----ERTIVSWTSVIDALAMEGRGKEAVAVFEEMKTAGVRPDDVAFIGVLTACSHA 361
Query: 299 GKLQLG 304
G + G
Sbjct: 362 GMVDEG 367
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/491 (42%), Positives = 315/491 (64%), Gaps = 3/491 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPE---CNDVVASTVMI 57
E ++ ++L++GLR + + ++++ + G+ + + + + E +V +T ++
Sbjct: 192 EAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALV 251
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y + G +E A VF + K+ V W++MI G NG ALDLF +M + ++P+
Sbjct: 252 DFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCY 311
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+V VL +C++LGALELG W + + + N ++G ALI+MY++CG +D+A +VF M
Sbjct: 312 AMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGM 371
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
+++D +N+ I+GLAM G +A+ +F +M GI+P + TFVG+L AC+H GLV+ G
Sbjct: 372 RKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGR 431
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F SM + + P+IEHYGC+VDLL R G +EA+ I +M + + I+ G+LL C++
Sbjct: 432 RYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRL 491
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
H QL E + K+L+ SG YVLLSN YA+S KW+EA +IR+ M E GV+K PG S
Sbjct: 492 HRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYS 551
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IEV+ +H+F++GD HP E+IY K+ EL + +K GY P+T+ VL DIE+ EKE +
Sbjct: 552 WIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYVPTTDHVLFDIEEEEKEHFI 611
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LA+ +GLIST P I VVKNLRVC DCH IK I+ I R+IIVRD NRFH F
Sbjct: 612 GCHSEKLAVAFGLISTAPNDKILVVKNLRVCGDCHEAIKHISRIAGREIIVRDNNRFHCF 671
Query: 478 ENGTCSCGDYW 488
+G CSC DYW
Sbjct: 672 TDGLCSCKDYW 682
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 203/421 (48%), Gaps = 35/421 (8%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D +IN Y + G ++NAF+VF + K+ WTA I G V G+ A+D+FR +
Sbjct: 142 DAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLL 201
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+RP+ ++V VLSAC + G L G WI Y+ ++ + N V AL++ Y +CG+++
Sbjct: 202 EMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNME 261
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+A VF+ M E+++ +++S+I G A +G EA+++F +M+N+G++P VGVL +C+
Sbjct: 262 RARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCA 321
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
G ++LG + + ++ + ++D+ ++ GR + A++ M+ D ++
Sbjct: 322 RLGALELGDWASNLINGNEFLDNSVLGTA-LIDMYAKCGRMDRAWEVFRGMR-KKDRVVW 379
Query: 289 GSLLSACKIHG----KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEA------ 338
+ +S + G L L Q+ K + D T+V L A +G +E
Sbjct: 380 NAAISGLAMSGHVKDALGLFGQMEKSGI---KPDRNTFVGLLCACTHAGLVEEGRRYFNS 436
Query: 339 ----VQIRAKMKEAGVQKE----PGC----------SSIEVNNEIHEFILGDIRHPQREQ 380
+ +++ G + GC +E N + +LG R + Q
Sbjct: 437 MECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQ 496
Query: 381 IYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIR 440
+ + + LK+++ LE + V+L +I +W A + G+ Y+ I
Sbjct: 497 LVEVV--LKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIE 554
Query: 441 V 441
V
Sbjct: 555 V 555
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 149/318 (46%), Gaps = 34/318 (10%)
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
G +F + + K + + MI GLV N +++++ M+++ + P+ T VL
Sbjct: 56 GNTNYSFRILDQTKEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVL 115
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
AC+++ ELG +HS + K + + V +LIN+Y++CG ID A +VF+++ +++
Sbjct: 116 KACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFA 175
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
++ + I+G G+ EA++MFR ++ G+RP + V VL+AC G + G I + +
Sbjct: 176 SWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYI 235
Query: 244 TRD---------------YG---------------IEPQIEHYGCIVDLLSRVGRPEEAY 273
T + YG +E I + ++ + G P+EA
Sbjct: 236 TENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEAL 295
Query: 274 DFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTY-VLLSNAY 329
D M + PD + +L +C G L+LG+ + + D+ L + Y
Sbjct: 296 DLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMY 355
Query: 330 ASSGKWKEAVQIRAKMKE 347
A G+ A ++ M++
Sbjct: 356 AKCGRMDRAWEVFRGMRK 373
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 114/292 (39%), Gaps = 77/292 (26%)
Query: 138 IHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR 197
IH+ + + +D + + ++ G+ + + ++ ++ KE ++ +N++I GL ++
Sbjct: 29 IHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLNDC 88
Query: 198 SIEAVEMFREMINQGIRPTKVTFVGVLNACSH---------------------------- 229
E++E++ M +G+ P TF VL AC+
Sbjct: 89 FQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKIS 148
Query: 230 -------GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDF---ITNM 279
G +D F++F + + + + VG+ EA D + M
Sbjct: 149 LINLYTKCGFIDNAFKVFDDIP-----DKNFASWTATISGYVGVGKCREAIDMFRRLLEM 203
Query: 280 KIAPDHIMLGSLLSACKIHGKLQLGEQI---------------AKRLLD----------C 314
+ PD L +LSACK G L+ GE I A L+D
Sbjct: 204 GLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERA 263
Query: 315 RSADSG-------TYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
RS G ++ + YAS+G KEA+ + KM G++ P C ++
Sbjct: 264 RSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLK--PDCYAM 313
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/496 (42%), Positives = 287/496 (57%), Gaps = 32/496 (6%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFE------------ 71
L+ + + G+ + A LF MPE N V S MI+ YVEHG +E A E
Sbjct: 173 LISGFAQNGQMQKAFDLFSVMPEKNGVSWSA-MISGYVEHGDLEAAEELYKNVGMKSVVV 231
Query: 72 -------------------VFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
+F R+ VK+ V W +MI G V N L +F+ M V
Sbjct: 232 ETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRV 291
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
RPN +++ VL CS L AL LGR +H + K + + +LI+MY +CGD+D A +
Sbjct: 292 RPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWK 351
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
+F EM +DV T+N++I+G A HG +A+ +F +M N ++P +TFV V+ AC+H G
Sbjct: 352 LFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGF 411
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
VDLG + F+SM +++GIE + HY C++DLL R GR +EA I M P + G+LL
Sbjct: 412 VDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFTPHAAIYGTLL 471
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
AC+IH L L E A+ LL+ + YV L+N YA++ KW + ++R MKE V K
Sbjct: 472 GACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVK 531
Query: 353 EPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE 412
PG S IE+ + HEF D HP+ I+KK+ EL +KL GY P E LHD+E+
Sbjct: 532 IPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEH 591
Query: 413 KEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRN 472
KE L HSE+LAI +GL+ T P T IRV KNLRVC DCH IK I+ I KR+IIVRD
Sbjct: 592 KEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTT 651
Query: 473 RFHHFENGTCSCGDYW 488
RFHHF NG CSCGDYW
Sbjct: 652 RFHHFRNGFCSCGDYW 667
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 36/220 (16%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H V K L + + L+ +Y KCG+ A +LF EMP DV+ MI+ Y
Sbjct: 314 GRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPR-KDVITWNAMISGYA 372
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+HG A +F + +RNG M +P+ +T V
Sbjct: 373 QHGAGRKALHLFDK----------------MRNGTM---------------KPDWITFVA 401
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
V+ AC+ G ++LG ++ S + I+ + +I++ R G +D+A+ + +EM
Sbjct: 402 VILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFT 461
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVT 219
Y +L+ +H A R ++N + PT T
Sbjct: 462 PHAAIYGTLLGACRIHKNLDLAEFAARNLLN--LDPTSAT 499
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/488 (41%), Positives = 297/488 (60%), Gaps = 33/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ IHG V+K+GL + L +Y KCG+ A FD+M
Sbjct: 288 QGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQM---------------- 331
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++ + + W AMI G +NG A+ LF+EM N+R + +T+
Sbjct: 332 ----------------EIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVR 375
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+ AC+Q+G+L+L +W+ Y+ K + V ALI+M+++CG +D A +VF+ ++
Sbjct: 376 SAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDK 435
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++++I G +HGR +A+++F M G+ P VTFVG+L AC+H GLV+ G+E+F
Sbjct: 436 DVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELF 495
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM + YGIE + +HY C+VDLL R G EAYDFIT M I P + G+LL ACKI+
Sbjct: 496 HSM-KYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRH 554
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+ LGE A++L ++G YV LSN YASS W ++R M+E G+ K+ G S IE
Sbjct: 555 VTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIE 614
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+N ++ F +GD HP+ ++I+++++ L++ +K G+ P E VLHD+ EKE L H
Sbjct: 615 INGKLQAFRVGDKSHPRFKEIFEELESLERRLKEAGFIPHIESVLHDLNQEEKEETLCNH 674
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLAI YGLIST P TT+R+ KNLR C +CHS KLI+ + R+I+VRD NRFHHF+NG
Sbjct: 675 SERLAIAYGLISTAPGTTLRITKNLRACINCHSATKLISKLVNREIVVRDANRFHHFKNG 734
Query: 481 TCSCGDYW 488
CSC DYW
Sbjct: 735 VCSCRDYW 742
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 157/349 (44%), Gaps = 68/349 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +HGQ+ +LG S+ + LV LY KCG
Sbjct: 188 GKRVHGQIFRLGFESDVFVQNGLVALYAKCGR---------------------------- 219
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
VE A VF + ++ V WT+MI G +NG AL +F +M++ NV+P+ + +V
Sbjct: 220 ----VEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVS 275
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL A + + LE G+ IH + K ++ + +L MY++CG + A F++M+ +
Sbjct: 276 VLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPN 335
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +N++I+G A +G + EAV +F+EMI++ IR +T + AC+ G +DL
Sbjct: 336 VMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLA----- 390
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
DY + + E D N + + + C G +
Sbjct: 391 KWMGDY------------------INKTEYRNDVFVNTALI-------DMFAKC---GSV 422
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
L ++ R LD D + + Y G+ ++A+ + MK+AGV
Sbjct: 423 DLAREVFDRTLD---KDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGV 468
>gi|108864632|gb|ABG22571.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/488 (42%), Positives = 304/488 (62%), Gaps = 2/488 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H + + + LV++Y KCG D ++FD M N VV T +++ Y
Sbjct: 206 GRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVFDSMSAKNSVVW-TALVSGYA 264
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+G E A ++F + ++ WTA+I GLV GE A++LF EM+RD VR ++ ++
Sbjct: 265 SNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRRDGVRIDDAFVLS 324
Query: 122 -VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+ + L A LGR +H + N IVG ALI+MYS+C DI A +VFE + R
Sbjct: 325 IVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYSKCSDILSAREVFEGITFR 384
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++ +++ G A HGR+ EA+ ++ M+ G +P +VTFVG++ ACSH GLV G ++F
Sbjct: 385 DVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLF 444
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+SM +YGI P+++HY C +DLLSR G EA + +T M PD G+LLSAC +
Sbjct: 445 ESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYEPDEATWGALLSACTKYKD 504
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++ +I+ +LL+ R DS TY+LLSN YA +GKW ++R M ++KEPG S IE
Sbjct: 505 AEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWDSVAKVRKCMIGLEIRKEPGYSWIE 564
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
E F G++ RE+I ++E+ ++ GY P T V+HD+E+ EKE L +H
Sbjct: 565 AGREFRLFHAGEVPLDVREEIMVFLEEMVLEMRKRGYVPDTSSVMHDLEESEKEHHLFLH 624
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLA+ +GLI + P + IRVVKNLRVC DCH+++KLI+ IT RKI+VRD +RFHHFE G
Sbjct: 625 SERLAVAFGLIKSPPGSVIRVVKNLRVCVDCHTVMKLISEITHRKIVVRDSSRFHHFEGG 684
Query: 481 TCSCGDYW 488
CSC ++W
Sbjct: 685 KCSCSEFW 692
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 97/194 (50%), Gaps = 5/194 (2%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNV 112
+++ Y + L+ +A +F +D +++++ + + AL + R M D +
Sbjct: 124 AALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSASPELALPILRCMLSADAL 183
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
P+ I V S ++L + LGR +H++ + + +V +L++MY +CG D +
Sbjct: 184 HPDHFVISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRK 243
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
VF+ M ++ + +L++G A +GRS EA+++FR M + + G++N G
Sbjct: 244 VFDSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGA 303
Query: 233 VDLGFEIFQSMTRD 246
V E+F M RD
Sbjct: 304 V----ELFVEMRRD 313
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/489 (41%), Positives = 306/489 (62%), Gaps = 4/489 (0%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMINCY 60
E+ +++ +GLR + ST + L+ ++ G A L + + + ST + Y
Sbjct: 308 ELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLY 367
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+++A F + K W AMI G +NG A+ LF++MQ NVRPN +TI
Sbjct: 368 CRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTIS 427
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
LSAC+QLGAL LG+W+H + +++LN V ALI+MY +CG I +A +F+ M +
Sbjct: 428 SALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNK 487
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+V ++N +I+G +HG+ EA++++++M++ + PT TF+ VL ACSHGGLV G +F
Sbjct: 488 NVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVF 547
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM-KIAPDHIMLGSLLSACKIHG 299
+SMT DYGI P IEH C+VDLL R G+ +EA++ I+ K A + G+LL AC +H
Sbjct: 548 RSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHK 607
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
L + +++L + ++G YVLLSN Y S ++ EA +R + K + K PGC+ I
Sbjct: 608 DGDLAKLASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLI 667
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E+ + H F+ GD HPQ + IY +++L + GY P TE L+D+E+ EKE + +
Sbjct: 668 EIGDRPHVFMAGDRAHPQSDAIYLYLEKLTAKMIEAGYRPDTEAALYDVEEEEKEHMVKV 727
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GL++T+P T IR++KNLRVC DCH+ K+I+ +T+R I+VRD +RFHHF +
Sbjct: 728 HSEKLAIAFGLLNTEPGTEIRIIKNLRVCLDCHNATKIISKVTQRLIVVRDASRFHHFRD 787
Query: 480 GTCSCGDYW 488
G CSCGDYW
Sbjct: 788 GVCSCGDYW 796
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 157/307 (51%), Gaps = 12/307 (3%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
T +I+ Y + G +E A +F R++ D V + A+I G NG + +++LF+E+ +R
Sbjct: 260 TGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLR 319
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
P+ T+V ++ S G L +H+++ K +D N V AL +Y R D+D A +
Sbjct: 320 PSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRA 379
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV 233
F+ M E+ + ++N++I+G A +G + AV +F++M +RP +T L+AC+ G +
Sbjct: 380 FDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGAL 439
Query: 234 DLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGS 290
LG + + + + +E + ++D+ + G EA +D + N + ++M
Sbjct: 440 SLGKWVHKIIANE-KLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVM--- 495
Query: 291 LLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNAYASSGKWKEAVQI-RAKMKEA 348
+S +HG+ ++ K ++D S T++ + A + G KE + R+ +
Sbjct: 496 -ISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDY 554
Query: 349 GVQKEPG 355
G+ PG
Sbjct: 555 GIT--PG 559
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 142/300 (47%), Gaps = 48/300 (16%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D ++ + Y +A +VF V DTV W ++ GL + AL+ F M
Sbjct: 157 DNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGL----SGSEALEAFVRMA 212
Query: 109 -RDNVRPNEVTIVCVLSACSQLGALELGRWIHSY-----MGKHRIDLNHIVGGALINMYS 162
+VRP+ T+ VL A +++ +GR +H++ + +H H+V G LI++Y+
Sbjct: 213 GAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHE----HVVTG-LISLYA 267
Query: 163 RCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVG 222
+CGD++ A +F+ M+ D+ TYN+LI+G +++G +VE+F+E++ G+RP+ T V
Sbjct: 268 KCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVA 327
Query: 223 V-----------LNACSHGGLVDLG-----------------FEIFQSMTRDYGIEPQ-- 252
+ L C H +V G F S R + P+
Sbjct: 328 LIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKT 387
Query: 253 IEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAK 309
+E + ++ ++ G E A M+ + P+ + + S LSAC G L LG+ + K
Sbjct: 388 MESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHK 447
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 74/184 (40%), Gaps = 37/184 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H + L N L+++Y KCG +A +FD M + +VV+ VMI+ Y
Sbjct: 442 GKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSM-DNKNVVSWNVMISGYG 500
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
H G+ A AL L+++M ++ P T +
Sbjct: 501 LH-------------------------------GQGAEALKLYKDMMDAHLHPTSSTFLS 529
Query: 122 VLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
VL ACS G ++ G + M + H ++++ R G + +A ++ E
Sbjct: 530 VLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCT--CMVDLLGRAGQLKEAFELISEFP 587
Query: 179 ERDV 182
+ V
Sbjct: 588 KSAV 591
>gi|357464871|ref|XP_003602717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491765|gb|AES72968.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 554
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/445 (44%), Positives = 290/445 (65%), Gaps = 4/445 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
++ +IN Y G ++ A ++F ++ +D V W+ +I LV+N A AL +F++M
Sbjct: 110 TNIFVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEALSVFQQM 169
Query: 108 Q--RDNVRP--NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSR 163
Q ++R + ++ V+SA S LG +ELG W+HS++ + I + +G ALINMYSR
Sbjct: 170 QMGHRDIRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRMGIVMTVPLGTALINMYSR 229
Query: 164 CGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGV 223
CG ID++++VF+EM ER+V T+ +LI GLA+HGRS EA+++F EM G++P F+GV
Sbjct: 230 CGLIDRSVKVFDEMPERNVVTWTALINGLAVHGRSREALKVFYEMKESGLKPDGALFIGV 289
Query: 224 LNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAP 283
L ACSHGGLV+ G+ +F+SM ++GI+P +EHYGC+VDLL R G EA+DF+ M + P
Sbjct: 290 LVACSHGGLVEDGWRVFESMRDEFGIKPMLEHYGCMVDLLGRAGLILEAFDFVEEMPLKP 349
Query: 284 DHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRA 343
+ ++ +LL AC H L L E+ +R+++ G YVLLSNAY G W +R
Sbjct: 350 NSVIWRTLLGACVNHNHLGLAEKARERIIELDPYHDGDYVLLSNAYGRVGNWGGKAGLRN 409
Query: 344 KMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEV 403
MK+ + KEPG S + ++ +HEF+ GD HPQ E+I K + + VKL GY+P+T
Sbjct: 410 SMKQNRIVKEPGLSFVHIDQVVHEFVSGDHVHPQWEEITKFLASIIDTVKLGGYTPNTSS 469
Query: 404 VLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITK 463
VLHDI+D EKE L HSE+LA+ + L+ + TIRV+KNLR+C DCH +K + I
Sbjct: 470 VLHDIQDEEKEHCLGYHSEKLAVAFVLLYHRDRRTIRVIKNLRICYDCHDFMKHASGIFD 529
Query: 464 RKIIVRDRNRFHHFENGTCSCGDYW 488
R II+RDRNRFHHF G CSC D+W
Sbjct: 530 RDIIIRDRNRFHHFSKGLCSCQDFW 554
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 103/211 (48%), Gaps = 40/211 (18%)
Query: 147 IDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
D N V ALIN Y G +D A+++F+EM+ RD+ ++++LI+ L + EA+ +F+
Sbjct: 108 FDTNIFVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEALSVFQ 167
Query: 207 EMI--NQGIRP--TKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDL 262
+M ++ IR + + V++A S G+++LG + + R GI + ++++
Sbjct: 168 QMQMGHRDIRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVR-MGIVMTVPLGTALINM 226
Query: 263 LSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTY 322
SR G + + +++ +++ +R + T+
Sbjct: 227 YSRCGLIDRS----------------------------VKVFDEMPER-------NVVTW 251
Query: 323 VLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
L N A G+ +EA+++ +MKE+G++ +
Sbjct: 252 TALINGLAVHGRSREALKVFYEMKESGLKPD 282
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 87/211 (41%), Gaps = 37/211 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H ++++G+ L+ +Y +CG ++++FDEMPE N VV T +IN
Sbjct: 201 GIWVHSFIVRMGIVMTVPLGTALINMYSRCGLIDRSVKVFDEMPERN-VVTWTALIN--- 256
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
GL +G AL +F EM+ ++P+ +
Sbjct: 257 ----------------------------GLAVHGRSREALKVFYEMKESGLKPDGALFIG 288
Query: 122 VLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
VL ACS G +E G + M + L H G ++++ R G I +A EEM
Sbjct: 289 VLVACSHGGLVEDGWRVFESMRDEFGIKPMLEHY--GCMVDLLGRAGLILEAFDFVEEMP 346
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
+ + + G ++ + E RE I
Sbjct: 347 LKPNSVIWRTLLGACVNHNHLGLAEKARERI 377
>gi|218188961|gb|EEC71388.1| hypothetical protein OsI_03510 [Oryza sativa Indica Group]
Length = 706
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/485 (42%), Positives = 299/485 (61%), Gaps = 1/485 (0%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
+H L+ G + + V +Y G+ A F E+ DVV T M+
Sbjct: 223 SVHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEI-ASPDVVCVTAMVGALATG 281
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
G + A E+F + +D V W AMI G V G AL LF EM+ EVT+V L
Sbjct: 282 GEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSAL 341
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
+AC+QLGALE G+W+HS + L+ +G ALI+MYS+CG + A++VF+ M ER+V
Sbjct: 342 TACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVY 401
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
T+ S ++GLAM+G + + +F+ M + G+ P VTFV VL CS GLVD G F SM
Sbjct: 402 TWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSM 461
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQL 303
++GI+P +EHYGC+VDL R GR ++A +FI M + P + G+LL+A +IH ++L
Sbjct: 462 KSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVEL 521
Query: 304 GEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNN 363
G+ +L+ S + +VLLSN YA S WK +R MK GV+K PGCS+IEV
Sbjct: 522 GKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKKVPGCSAIEVGG 581
Query: 364 EIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSER 423
++HEF +G HP+ ++I + E+ Q ++L+GY +T+ VL DIE+ +KE A+++HSE+
Sbjct: 582 KVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDIEEEDKEDAISLHSEK 641
Query: 424 LAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCS 483
LAI +GL++ IR+VKNLRVC DCH K+I+ + R+I++RDRNRFHHF++G CS
Sbjct: 642 LAIAFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNREIVMRDRNRFHHFKDGACS 701
Query: 484 CGDYW 488
C DYW
Sbjct: 702 CKDYW 706
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 75/179 (41%), Gaps = 37/179 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H G+R + + L+++Y KCG AM++FD M E
Sbjct: 353 GKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGE--------------- 397
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ WT+ + GL NG L LF+ M+ V PN VT V
Sbjct: 398 -----------------RNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVV 440
Query: 122 VLSACSQLGALELGRWIHSYM-GKHRID--LNHIVGGALINMYSRCGDIDKALQVFEEM 177
VL CS G ++ GR M H ID L H G ++++Y R G +D A+ M
Sbjct: 441 VLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHY--GCMVDLYGRAGRLDDAVNFINGM 497
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/489 (42%), Positives = 298/489 (60%), Gaps = 33/489 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR++H +KLGL N V +IN Y
Sbjct: 147 EGRQLHCLSMKLGLDDN--------------------------------VYVCPTLINMY 174
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
E V++A VF R+ VC+ AMI G R AL LFREMQ ++PNE+T++
Sbjct: 175 TECEDVDSARXVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLL 234
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLS+C+ LG+L+LG+WIH Y KH V ALI+M+++CG +D A+ +FE+M+ +
Sbjct: 235 SVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK 294
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++++I A HG++ +++ MF M ++ ++P ++TF+G+LNACSH G V+ G + F
Sbjct: 295 DTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYF 354
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
M +GI P I+HYG +VDLLS G E+AY+FI + I+P ++ LL+AC H
Sbjct: 355 SQMVSKFGIVPSIKHYGSMVDLLSXAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNN 414
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
L L E++++R+ + + G YV+LSN YA + KW+ +R MK+ K PGCSSIE
Sbjct: 415 LDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIE 474
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH-DIEDWEKEWALAI 419
VNN +HEF GD ++++ + E+ + +KL GY P T +V+H ++ D EKE L
Sbjct: 475 VNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRY 534
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GL++T P TTIRVVKNLRVC DCH+ KLI+ I RK++ RD RFHHFE+
Sbjct: 535 HSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVXRDVQRFHHFED 594
Query: 480 GTCSCGDYW 488
G CSCGD+W
Sbjct: 595 GKCSCGDFW 603
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 153/325 (47%), Gaps = 8/325 (2%)
Query: 27 LYGKCGEFKDAMQL--FDEMPECNDVVASTVMINCYVE---HGLVENAFEVFSRVKVKDT 81
L KC ++ MQ+ + DV +IN E + A +F + D
Sbjct: 35 LISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDI 94
Query: 82 VCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSY 141
V + +M G R LF E+ D + P+ T +L AC+ ALE GR +H
Sbjct: 95 VIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCL 154
Query: 142 MGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEA 201
K +D N V LINMY+ C D+D A VF+ + E V YN++I G A R EA
Sbjct: 155 SMKLGLDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNAMITGYARRNRPNEA 214
Query: 202 VEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVD 261
+ +FREM + ++P ++T + VL++C+ G +DLG I + + ++ ++D
Sbjct: 215 LSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWI-HKYAKKHSFCKYVKVNTALID 273
Query: 262 LLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL-LDCRSADSG 320
+ ++ G ++A M+ D +++ A HGK + + +R+ + D
Sbjct: 274 MFAKCGSLDDAVSIFEKMRYK-DTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEI 332
Query: 321 TYVLLSNAYASSGKWKEAVQIRAKM 345
T++ L NA + +G+ +E + ++M
Sbjct: 333 TFLGLLNACSHTGRVEEGRKYFSQM 357
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/529 (39%), Positives = 304/529 (57%), Gaps = 43/529 (8%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+IHG K+GL S LV +YGKCG +A + DEM DVV+ ++ Y
Sbjct: 159 GRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSR-RDVVSWNSLVVGYA 217
Query: 62 EHGLVENAFEV-------------------------------------FSRVKVKDTVCW 84
++ ++A EV F ++ K V W
Sbjct: 218 QNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSW 277
Query: 85 TAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGK 144
MI ++N A++L+ M+ D P+ V+I VL AC AL LG+ IH Y+ +
Sbjct: 278 NVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIER 337
Query: 145 HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEM 204
++ N ++ ALI+MY++CG ++KA VFE MK RDV ++ ++I+ GR +AV +
Sbjct: 338 KKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVAL 397
Query: 205 FREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLS 264
F ++ + G+ P + FV L ACSH GL++ G F+ MT Y I P++EH C+VDLL
Sbjct: 398 FSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLG 457
Query: 265 RVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVL 324
R G+ +EAY FI +M + P+ + G+LL AC++H +G A +L SG YVL
Sbjct: 458 RAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVL 517
Query: 325 LSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKK 384
LSN YA +G+W+E IR MK G++K PG S++EVN IH F++GD HPQ ++IY++
Sbjct: 518 LSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRE 577
Query: 385 MQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTK-----PYTTI 439
+ L + +K GY P +E LHD+E+ +KE LA+HSE+LAI + L++TK TI
Sbjct: 578 LDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTI 637
Query: 440 RVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
R+ KNLR+C DCH KLI+ IT R+II+RD NRFH F G CSCGDYW
Sbjct: 638 RITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 171/385 (44%), Gaps = 74/385 (19%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
R +H +++ LR N S +KL+ Y + A ++FDE+PE N ++IN
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERN-----VIIIN---- 109
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
MI V NG + +F M NVRP+ T CV
Sbjct: 110 -----------------------VMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCV 146
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L ACS G + +GR IH K + VG L++MY +CG + +A V +EM RDV
Sbjct: 147 LKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDV 206
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF--EIF 240
++NSL+ G A + R +A+E+ REM + I T +L A S+ ++ + ++F
Sbjct: 207 VSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMF 266
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSAC-- 295
M + + + ++ + + P EA + + M+ PD + + S+L AC
Sbjct: 267 FKMGKK-----SLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGD 321
Query: 296 --------KIHGKLQLGEQIAKRLL----------------------DCRSADSGTYVLL 325
KIHG ++ + I LL + +S D ++ +
Sbjct: 322 TSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAM 381
Query: 326 SNAYASSGKWKEAVQIRAKMKEAGV 350
+AY SG+ +AV + +K++++G+
Sbjct: 382 ISAYGFSGRGCDAVALFSKLQDSGL 406
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/473 (43%), Positives = 291/473 (61%), Gaps = 2/473 (0%)
Query: 17 NRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRV 76
N T +++ Y + G +A +LF MP V A MI + +G V A VF ++
Sbjct: 232 NEVTWTAMLKGYTRSGRINEAAELFKAMP-VKPVAACNGMIMGFGLNGEVGKARWVFDQM 290
Query: 77 KVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGR 136
K KD W+A+I R G AL LF MQR+ VRPN +I+ +LS C L +L+ GR
Sbjct: 291 KEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGR 350
Query: 137 WIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHG 196
+HS + + DL+ V LI MY +CGD+ +VF+ +D+ +NS+IAG A HG
Sbjct: 351 QVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHG 410
Query: 197 RSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHY 256
+A+E+F EM + G P ++TF+GVL+AC + G V G EIF+SM Y ++ + EHY
Sbjct: 411 FGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHY 470
Query: 257 GCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRS 316
C+VDLL R G+ EA + I NM + D I+ G+LLSAC+ H L L E AK+LL
Sbjct: 471 ACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEP 530
Query: 317 ADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFI-LGDIRH 375
+ +G Y+LLSN YAS +WK+ ++R M+ V K PGCS IEV+N++H F G H
Sbjct: 531 SSAGPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASH 590
Query: 376 PQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKP 435
P+ E I KK+++L ++ GY P V+HD+++ +K +L HSE++A+ YGL+
Sbjct: 591 PEHEMIMKKLEKLGASLREAGYCPDGSFVMHDVDEEDKVHSLRHHSEKMAVAYGLLKVPV 650
Query: 436 YTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
IRV+KNLRVC DCHS IKLIA +T R+II+RD NRFHHF++G CSC D+W
Sbjct: 651 GKPIRVMKNLRVCGDCHSAIKLIAQVTGREIILRDANRFHHFKDGLCSCRDFW 703
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 162/360 (45%), Gaps = 53/360 (14%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
+V Y + G +A LF MPE N VV+ TVM+ +E G V+ A +F + VKD V
Sbjct: 115 MVRGYVQEGLIDEAELLFWRMPEKN-VVSWTVMLGGLIEDGRVDEARRLFDMIPVKDVVA 173
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
T MI GL G ++ A ++F EM + NV V ++S + +++ R + M
Sbjct: 174 STNMIGGLCSEGRLSEAREIFDEMPQRNV----VAWTSMISGYAMNNKVDVARKLFEVMP 229
Query: 144 KHRIDLNHIVGGALINMYSRCGDID-------------------------------KALQ 172
D N + A++ Y+R G I+ KA
Sbjct: 230 ----DKNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACNGMIMGFGLNGEVGKARW 285
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
VF++MKE+D T+++LI G +EA+ +F M +G+RP + + +L+ C
Sbjct: 286 VFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLAS 345
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKI-----APDHIM 287
+D G ++ + R + + I ++ + + G D +T ++ + D +M
Sbjct: 346 LDHGRQVHSQLVRSH-FDLDIYVSSVLITMYIKCG------DLVTGKRVFDRFSSKDIVM 398
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSA-DSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
S+++ HG + ++ + +A D T++ + +A +GK KE ++I MK
Sbjct: 399 WNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMK 458
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 151/335 (45%), Gaps = 24/335 (7%)
Query: 25 VELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCW 84
+ + + G+ A +FD++ + V + ++ Y + A ++F ++ ++T+ W
Sbjct: 23 ISYFARLGQIDRARNIFDDL-QSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPERNTISW 81
Query: 85 TAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGK 144
++ G V+NG ++ A +F +M NV V+ ++ Q G ++ + M +
Sbjct: 82 NGLVSGYVKNGMISEARKVFDKMPERNV----VSWTSMVRGYVQEGLIDEAELLFWRMPE 137
Query: 145 HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEM 204
+ ++ G LI G +D+A ++F+ + +DV ++I GL GR EA E+
Sbjct: 138 KNVVSWTVMLGGLIE----DGRVDEARRLFDMIPVKDVVASTNMIGGLCSEGRLSEAREI 193
Query: 205 FREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLS 264
F EM + + V + +++ + VD+ ++F+ M + + ++ +
Sbjct: 194 FDEMPQRNV----VAWTSMISGYAMNNKVDVARKLFEVMPDKNEVT-----WTAMLKGYT 244
Query: 265 RVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVL 324
R GR EA + M + P G ++ ++G++ + ++ + D GT+
Sbjct: 245 RSGRINEAAELFKAMPVKPVAACNG-MIMGFGLNGEVGKARWVFDQM---KEKDDGTWSA 300
Query: 325 LSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
L Y G EA+ + + M+ GV+ P SI
Sbjct: 301 LIKIYERKGFELEALALFSLMQREGVR--PNFPSI 333
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/479 (41%), Positives = 301/479 (62%), Gaps = 3/479 (0%)
Query: 13 GLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPE---CNDVVASTVMINCYVEHGLVENA 69
G+R + T ++++ + + ++ + V +T ++ YV+ G + A
Sbjct: 167 GMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKA 226
Query: 70 FEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQL 129
EVF +++ KD V W AM+ G NG ALDLF MQ + ++P+ + LSAC++L
Sbjct: 227 REVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRL 286
Query: 130 GALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLI 189
GAL+LGR + N ++G ALI+MY++CG +A VF++M+++D+ +N++I
Sbjct: 287 GALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMI 346
Query: 190 AGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGI 249
GL M G A + +M G++ TF+G+L +C+H GL+ G F +MT+ Y I
Sbjct: 347 LGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHI 406
Query: 250 EPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAK 309
P+IEHYGC+VDLLSR G +EA+ + +M + + ++LG+LL CKIH +L E + K
Sbjct: 407 SPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLK 466
Query: 310 RLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFI 369
+L+ +SG YV+LSN Y++ G+W++A ++R MK GV+K P CS +E ++HEF
Sbjct: 467 QLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFR 526
Query: 370 LGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYG 429
+GD HP +QIYKK+ EL +K GY P+TEVV+ D+ED EKE L HSE+LAI +
Sbjct: 527 VGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFN 586
Query: 430 LISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
L+ T P TIRV KNLRVC+DCH+ IKL++ IT R+IIVRD NRFH F +G+CSC DYW
Sbjct: 587 LLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 645
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 131/279 (46%), Gaps = 33/279 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++H + LKL +N L+ LY KCG
Sbjct: 90 GEQLHARSLKLPSHTNPHVLTSLLSLYAKCG----------------------------- 120
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
L+ A VF + TV WTA+I + G++ A+ + R + +RP+ T V
Sbjct: 121 ---LLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVR 177
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL+AC+++ L G + + + + V A +++Y +CG++ KA +VF++M+ +D
Sbjct: 178 VLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKD 237
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ +++ G A +G EA+++F M +G++P G L+AC+ G +DLG + +
Sbjct: 238 AVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIR 297
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
+ D ++ + ++D+ ++ G EA+ M+
Sbjct: 298 MVDWDEFLDNPVLGTA-LIDMYAKCGSTVEAWVVFQQMR 335
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 35/234 (14%)
Query: 114 PNEVTIVCVLSACSQLG-ALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
P+ +TI L + S+L L G +H+ K N V +L+++Y++CG + +A +
Sbjct: 68 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 127
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
VF+EM + +LI G EAV + R G+RP T V VL AC+
Sbjct: 128 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 187
Query: 233 VDLGFEIFQS-------------------------MTRDYGIEPQIEH-----YGCIVDL 262
+ G ++++ M + + ++ H +G +V
Sbjct: 188 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 247
Query: 263 LSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
+ G P EA D M+ + PD + LSAC G L LG Q A R++D
Sbjct: 248 YASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQ-AIRMVD 300
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/475 (41%), Positives = 301/475 (63%), Gaps = 7/475 (1%)
Query: 20 TRLKLVELYGKCGEFKD------AMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVF 73
T + ++E C + D + D++ +D+ +I+ Y + V+ A ++F
Sbjct: 348 TGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIF 407
Query: 74 SRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALE 133
+ + + V W AMI G +NG ++ AL+ F EM+ ++P+ T+V V+ A ++L
Sbjct: 408 NNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTR 467
Query: 134 LGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLA 193
+WIH + + +D N V AL++MYS+CG I A ++F+ + +R V T+N++I G
Sbjct: 468 HAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYG 527
Query: 194 MHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQI 253
HG A+++F +M + P +T++ V++ACSH GLVD G F+SM +DYG+EP +
Sbjct: 528 THGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSM 587
Query: 254 EHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
+HYG +VDLL R GR +EA+DFI NM I+P + G++L ACKIH +++GE+ AK+L +
Sbjct: 588 DHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFE 647
Query: 314 CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDI 373
+ G +VLL+N YAS+ KW + ++R M++ G++K PGCS +E+ NE+H F G
Sbjct: 648 LNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGST 707
Query: 374 RHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLIST 433
HPQ ++IY ++EL +K GY P T ++L D+ED +E L HSE+LAI +GL++T
Sbjct: 708 THPQSKRIYAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNT 766
Query: 434 KPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
P TTI V KNLRVC DCH+ K I+ +T R+IIVRD RFHHF+NG CSCGDYW
Sbjct: 767 SPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 135/278 (48%), Gaps = 33/278 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIHGQ++ +N +V +Y KC +
Sbjct: 166 GKEIHGQLITNSFAANVFAMTGVVNMYAKCRQ---------------------------- 197
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+++A+++F R+ +D V W +I G +NG +AL+L MQ + RP+ +T+V
Sbjct: 198 ----IDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVT 253
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL A + +G L +G+ IH Y + + AL +MYS+CG ++ A +F+ M ++
Sbjct: 254 VLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKT 313
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++NS++ G +G +A+ +F +M+ +GI PT VT + L+AC+ G ++ G +
Sbjct: 314 VVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERG-KFVH 372
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM 279
+ I ++ + S+ R + A D N+
Sbjct: 373 KFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNL 410
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 154/302 (50%), Gaps = 15/302 (4%)
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
ST + + Y + G VE A +F + K V W +M+DG V+NGE +A+ +F +M + +
Sbjct: 286 STALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGI 345
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
P VTI+ L AC+ LG LE G+++H ++ + + + V +LI+MYS+C +D A
Sbjct: 346 DPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASD 405
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
+F + R ++N++I G A +GR EA+ F EM + G++P T V V+ A + +
Sbjct: 406 IFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSV 465
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLG 289
I + R ++ I +VD+ S+ G A +D I++ + I
Sbjct: 466 TRHAKWIHGLIIRS-CLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHV----ITWN 520
Query: 290 SLLSACKIHG----KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
+++ HG L L +++ K ++ + TY+ + +A + SG E ++ M
Sbjct: 521 AMIDGYGTHGLGRAALDLFDKMKKGAVE---PNDITYLSVISACSHSGLVDEGLRHFKSM 577
Query: 346 KE 347
K+
Sbjct: 578 KQ 579
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 120/249 (48%), Gaps = 1/249 (0%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
L+EL E + L + N+ + T +++ + ++G + A VF + K
Sbjct: 55 LLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDAL 114
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
+ M+ G +N + AL M+ D+V+P +L C L+ G+ IH +
Sbjct: 115 YHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLI 174
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
+ N ++NMY++C ID A ++F+ M ERD+ ++N++IAG + +G + +A+E
Sbjct: 175 TNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALE 234
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
+ M ++G RP +T V VL A + GL+ +G I R G + + D+
Sbjct: 235 LVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRA-GFAKLVNISTALADMY 293
Query: 264 SRVGRPEEA 272
S+ G E A
Sbjct: 294 SKCGSVETA 302
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 35/201 (17%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
IHG +++ L N LV++Y KCG A +LFD + + V+ MI+ Y HG
Sbjct: 472 IHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISD-RHVITWNAMIDGYGTHG 530
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
L ALDLF +M++ V PN++T + V+S
Sbjct: 531 LGR-------------------------------AALDLFDKMKKGAVEPNDITYLSVIS 559
Query: 125 ACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-ERDV 182
ACS G ++ G R S + ++ + GA++++ R G I +A E M +
Sbjct: 560 ACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGI 619
Query: 183 TTYNSLIAGLAMHGRSIEAVE 203
T Y +++ +H ++IE E
Sbjct: 620 TVYGAMLGACKIH-KNIEVGE 639
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/487 (40%), Positives = 291/487 (59%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIHG VL+ + + L+ +Y C
Sbjct: 518 GKEIHGYVLRNHIELSTGVGSALISMYSGCDS---------------------------- 549
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+E A VFS + +D V W ++I ++G ALDL REM NV N VT+V
Sbjct: 550 ----LEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVS 605
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
L ACS+L AL G+ IH ++ + +D + + +LI+MY RCG I K+ ++F+ M +RD
Sbjct: 606 ALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRD 665
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++N +I+ MHG ++AV +F++ G++P +TF +L+ACSH GL++ G++ F+
Sbjct: 666 LVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFK 725
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M +Y ++P +E Y C+VDLLSR G+ E +FI M P+ + GSLL AC+IH
Sbjct: 726 MMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNP 785
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
L E A+ L + SG YVL++N Y+++G+W++A +IR MKE GV K PGCS IEV
Sbjct: 786 DLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEV 845
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
++H F++GD HP EQI KM+ L +K GY P T VL D+++ EKE++L HS
Sbjct: 846 KRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHS 905
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E++A+ +GLIST T +R++KNLRVC DCHS K I+ + KR II+RD RFHHF +G
Sbjct: 906 EKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGV 965
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 966 CSCGDYW 972
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 117/384 (30%), Positives = 185/384 (48%), Gaps = 41/384 (10%)
Query: 2 GREIHGQVLKLG-LRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
GREIHG +K+ L S+ LV+ Y KC + A + F M + D+V+ M+ Y
Sbjct: 381 GREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFG-MIKQTDLVSWNAMLAGY 439
Query: 61 VEHGLVENAFEVFSRVKVK----DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
G E A E+ S +K + D + W ++ G + G+ AL+ F+ M + PN
Sbjct: 440 ALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNT 499
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
TI L+AC Q+ L+LG+ IH Y+ ++ I+L+ VG ALI+MYS C ++ A VF E
Sbjct: 500 TTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSE 559
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
+ RDV +NS+I+ A GRS+ A+++ REM + VT V L ACS + G
Sbjct: 560 LSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQG 619
Query: 237 FEIFQSMTR------DYGIEPQIEHYG-C--------IVDLLSRV--------------- 266
EI Q + R ++ + I+ YG C I DL+ +
Sbjct: 620 KEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMH 679
Query: 267 GRPEEAYDFIT---NMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT-- 321
G +A + M + P+HI +LLSAC G ++ G + K + + D
Sbjct: 680 GFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQ 739
Query: 322 YVLLSNAYASSGKWKEAVQIRAKM 345
Y + + + +G++ E ++ KM
Sbjct: 740 YACMVDLLSRAGQFNETLEFIEKM 763
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 194/437 (44%), Gaps = 86/437 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G++++ +L +G N + +++++ KCG A + F+E+ E DV +M++ Y
Sbjct: 209 GKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEI-EFKDVFMWNIMVSGYT 267
Query: 62 EHGLVENAFEVFSRVKVK----------------------------------------DT 81
G + A + S +K+ +
Sbjct: 268 SKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNV 327
Query: 82 VCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSY 141
V WTA+I G +NG AL +FR+M + V+PN +TI +SAC+ L L GR IH Y
Sbjct: 328 VSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGY 387
Query: 142 MGK-HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIE 200
K +D + +VG +L++ Y++C ++ A + F +K+ D+ ++N+++AG A+ G E
Sbjct: 388 CIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEE 447
Query: 201 AVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIV 260
A+E+ EM QGI P +T+ G++ + G E FQ M G++P I
Sbjct: 448 AIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRM-HSMGMDPNTT---TIS 503
Query: 261 DLLSRVGRPEEAYDFITNMKIAP--------DHIMLG--------SLLSACKIHGKLQLG 304
L+ G+ + N+K+ +HI L S+ S C L++
Sbjct: 504 GALAACGQ-------VRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCD---SLEVA 553
Query: 305 EQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE--------PGC 356
+ L + D + + +A A SG+ A+ + +M + V+ P C
Sbjct: 554 CSVFSEL---STRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPAC 610
Query: 357 SSIEV---NNEIHEFIL 370
S + EIH+FI+
Sbjct: 611 SKLAALRQGKEIHQFII 627
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 153/334 (45%), Gaps = 36/334 (10%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
++ Y + G VE+A +F ++ ++ WTA+++ G+ + LF M + VRP+
Sbjct: 130 LLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPD 189
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
V ACS+L +G+ ++ YM + N V G++++M+ +CG +D A + FE
Sbjct: 190 HFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFE 249
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
E++ +DV +N +++G G +A++ +M G++P +VT+ +++ + G +
Sbjct: 250 EIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEE 309
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLL 292
+ F M +P + + ++ + G EA M + P+ I + S +
Sbjct: 310 ASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAV 369
Query: 293 SAC----------KIHG----------KLQLGEQIAKRLLDCRS-------------ADS 319
SAC +IHG L +G + CRS D
Sbjct: 370 SACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDL 429
Query: 320 GTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
++ + YA G +EA+++ ++MK G++ +
Sbjct: 430 VSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPD 463
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 7/256 (2%)
Query: 93 RNGEMARALDLFREMQRDNVRPNEVTIV--CVLSACSQLGALELGRWIHSYMGKHRIDLN 150
RNG + A L M N P+E + +L C +L L LG +H+ + + +D+
Sbjct: 66 RNGVLNNAAMLLSSMDLTN--PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVC 123
Query: 151 HIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
+G L+ +Y + G ++ A ++F++M ER+V ++ +++ G E +++F M+N
Sbjct: 124 EFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVN 183
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
+G+RP F V ACS +G +++ M G E G I+D+ + GR +
Sbjct: 184 EGVRPDHFVFPKVFKACSELKNYRVGKDVYDYML-SIGFEGNSCVKGSILDMFIKCGRMD 242
Query: 271 EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQ-IAKRLLDCRSADSGTYVLLSNAY 329
A F ++ D M ++S G+ + + I+ L D T+ + + Y
Sbjct: 243 IARRFFEEIEF-KDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGY 301
Query: 330 ASSGKWKEAVQIRAKM 345
A SG+++EA + +M
Sbjct: 302 AQSGQFEEASKYFLEM 317
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 36/198 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+EIH +++ GL + L+++YG+CG + + ++FD MP+ D+V+ VMI+ Y
Sbjct: 618 QGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQ-RDLVSWNVMISVY 676
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG + A++LF++ + ++PN +T
Sbjct: 677 GMHGFGMD-------------------------------AVNLFQQFRTMGLKPNHITFT 705
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG--GALINMYSRCGDIDKALQVFEEMK 178
+LSACS G +E G W + M K ++ V ++++ SR G ++ L+ E+M
Sbjct: 706 NLLSACSHSGLIEEG-WKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMP 764
Query: 179 -ERDVTTYNSLIAGLAMH 195
E + + SL+ +H
Sbjct: 765 FEPNAAVWGSLLGACRIH 782
>gi|222619165|gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japonica Group]
Length = 706
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/485 (42%), Positives = 299/485 (61%), Gaps = 1/485 (0%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
+H L+ G + + V +Y G+ A F E+ DVV T M+
Sbjct: 223 SVHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEI-ASPDVVCVTAMVGALATG 281
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
G + A E+F + +D V W AMI G V G AL LF EM+ EVT+V L
Sbjct: 282 GEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSAL 341
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
+AC+QLGALE G+W+HS + L+ +G ALI+MYS+CG + A++VF+ M ER+V
Sbjct: 342 TACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVY 401
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
T+ S ++GLAM+G + + +F+ M + G+ P VTFV VL CS GLVD G F SM
Sbjct: 402 TWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSM 461
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQL 303
++GI+P +EHYGC+VDL R GR ++A +FI M + P + G+LL+A +IH ++L
Sbjct: 462 KSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVEL 521
Query: 304 GEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNN 363
G+ +L+ S + +VLLSN YA S WK +R MK GV+K PGCS+IEV
Sbjct: 522 GKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKKVPGCSAIEVGG 581
Query: 364 EIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSER 423
++HEF +G HP+ ++I + E+ Q ++L+GY +T+ VL DIE+ +KE A+++HSE+
Sbjct: 582 KVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDIEEEDKEDAISLHSEK 641
Query: 424 LAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCS 483
LAI +GL++ IR+VKNLRVC DCH K+I+ + R+I++RDRNRFHHF++G CS
Sbjct: 642 LAIAFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNREIVMRDRNRFHHFKDGACS 701
Query: 484 CGDYW 488
C DYW
Sbjct: 702 CKDYW 706
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 75/179 (41%), Gaps = 37/179 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H G+R + + L+++Y KCG AM++FD M E
Sbjct: 353 GKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGE--------------- 397
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ WT+ + GL NG L LF+ M+ V PN VT V
Sbjct: 398 -----------------RNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVV 440
Query: 122 VLSACSQLGALELGRWIHSYM-GKHRID--LNHIVGGALINMYSRCGDIDKALQVFEEM 177
VL CS G ++ GR M H ID L H G ++++Y R G +D A+ M
Sbjct: 441 VLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHY--GCMVDLYGRAGRLDDAVNFINGM 497
>gi|297597505|ref|NP_001044065.2| Os01g0715700 [Oryza sativa Japonica Group]
gi|255673627|dbj|BAF05979.2| Os01g0715700 [Oryza sativa Japonica Group]
Length = 699
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/485 (42%), Positives = 299/485 (61%), Gaps = 1/485 (0%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
+H L+ G + + V +Y G+ A F E+ DVV T M+
Sbjct: 216 SVHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEI-ASPDVVCVTAMVGALATG 274
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
G + A E+F + +D V W AMI G V G AL LF EM+ EVT+V L
Sbjct: 275 GEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSAL 334
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
+AC+QLGALE G+W+HS + L+ +G ALI+MYS+CG + A++VF+ M ER+V
Sbjct: 335 TACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVY 394
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
T+ S ++GLAM+G + + +F+ M + G+ P VTFV VL CS GLVD G F SM
Sbjct: 395 TWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSM 454
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQL 303
++GI+P +EHYGC+VDL R GR ++A +FI M + P + G+LL+A +IH ++L
Sbjct: 455 KSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVEL 514
Query: 304 GEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNN 363
G+ +L+ S + +VLLSN YA S WK +R MK GV+K PGCS+IEV
Sbjct: 515 GKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKKVPGCSAIEVGG 574
Query: 364 EIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSER 423
++HEF +G HP+ ++I + E+ Q ++L+GY +T+ VL DIE+ +KE A+++HSE+
Sbjct: 575 KVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDIEEEDKEDAISLHSEK 634
Query: 424 LAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCS 483
LAI +GL++ IR+VKNLRVC DCH K+I+ + R+I++RDRNRFHHF++G CS
Sbjct: 635 LAIAFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNREIVMRDRNRFHHFKDGACS 694
Query: 484 CGDYW 488
C DYW
Sbjct: 695 CKDYW 699
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 75/179 (41%), Gaps = 37/179 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H G+R + + L+++Y KCG AM++FD M E
Sbjct: 346 GKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGE--------------- 390
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ WT+ + GL NG L LF+ M+ V PN VT V
Sbjct: 391 -----------------RNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVV 433
Query: 122 VLSACSQLGALELGRWIHSYM-GKHRID--LNHIVGGALINMYSRCGDIDKALQVFEEM 177
VL CS G ++ GR M H ID L H G ++++Y R G +D A+ M
Sbjct: 434 VLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHY--GCMVDLYGRAGRLDDAVNFINGM 490
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/519 (40%), Positives = 315/519 (60%), Gaps = 32/519 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPE--------------- 46
G ++H Q + GL ++ LV +Y +CG A ++F+EM E
Sbjct: 125 GIQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFR 184
Query: 47 CNDVVASTVMIN---------------CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGL 91
C DV + +M N Y + G +E A ++F + VKD V W+ MI G
Sbjct: 185 CGDVKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGF 244
Query: 92 VRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH 151
NG A FRE+Q+ +RPNEV++ LSAC+ GA+E G+ +H ++ K
Sbjct: 245 AHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMV 304
Query: 152 IVGGALINMYSRCGDIDKALQVFEEMKE-RDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
V AL++ YS+CG++ A VFE M E R + ++ S+IAGLAMHG EA+++F EM
Sbjct: 305 SVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEE 364
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
GIRP + F+ +L ACSH GL++ G+E F M Y IEP IEHYGC+VDL R G+ +
Sbjct: 365 SGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLD 424
Query: 271 EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYA 330
+AY+FI +M + P I+ +LL AC IHG ++L E++ +RL + +SG +VLLSN YA
Sbjct: 425 KAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNNSGDHVLLSNIYA 484
Query: 331 SSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQ 390
+GKWK+ +R M + + K PG S IEV+ ++ F+ G++++ E+ Y+K++E+
Sbjct: 485 VAGKWKDVAAVRRSMTDQRMNKTPGWSMIEVDKIMYSFVAGEVQNSITEEAYEKLKEIML 544
Query: 391 IVKLEG-YSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCN 449
+++EG Y P VLHDIED EKE +++ HSE+LA+ +G+ + IR+VKNLRVC
Sbjct: 545 KLRVEGCYIPEVGSVLHDIEDEEKEDSVSRHSEKLAVAFGIARLCKGSIIRIVKNLRVCR 604
Query: 450 DCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
DCH+++KLI+ + +I+VRDR+RFH F+ G+CSC DYW
Sbjct: 605 DCHTVMKLISKVYGLEIVVRDRSRFHSFKTGSCSCRDYW 643
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 116/265 (43%), Gaps = 14/265 (5%)
Query: 46 ECNDVVASTVMINCYVE-HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLF 104
+ + ++A ++++ V ++ A +F D +I GL + +L F
Sbjct: 34 DTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPNPDVFMHNTLIRGLAESDTPQNSLITF 93
Query: 105 REMQRDNVRP-NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSR 163
EM+R P + + +L A + +LE G +H H +D + VG L++MYS
Sbjct: 94 VEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQLHCQAIVHGLDTHLFVGTTLVSMYSE 153
Query: 164 CGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGV 223
CG + A +VFEEM E +V +N+++ G A MF M + + V G
Sbjct: 154 CGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCGDVKGADMMFNRMPFRNLTSWNVMLAGY 213
Query: 224 LNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK--- 280
A G ++L ++F M ++ + IV + G EA+ F ++
Sbjct: 214 TKA----GELELARKLFLEMP----VKDDVSWSTMIVG-FAHNGFFYEAFGFFRELQQVG 264
Query: 281 IAPDHIMLGSLLSACKIHGKLQLGE 305
+ P+ + L LSAC G ++ G+
Sbjct: 265 MRPNEVSLTGALSACADAGAIEFGK 289
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/434 (44%), Positives = 293/434 (67%), Gaps = 1/434 (0%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+++ Y G V +A++VF ++ KD V W ++I+G NG+ AL L+ EM ++P+
Sbjct: 162 LLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPD 221
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
TIV +LSAC+++GAL LG+ +H YM K + N L+++Y+RCG +++A +F+
Sbjct: 222 GFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFD 281
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM-INQGIRPTKVTFVGVLNACSHGGLVD 234
EM +++ ++ SLI GLA++G EA+E+F+ M +G+ P ++TFVG+L ACSH G+V
Sbjct: 282 EMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVK 341
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
GFE F+ M +Y IEP+IEH+GC+VDLL+R G+ ++AY++I +M + P+ ++ +LL A
Sbjct: 342 EGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGA 401
Query: 295 CKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
C +HG L E ++L SG YVLLSN YAS +W + +IR +M GV+K P
Sbjct: 402 CTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVP 461
Query: 355 GCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKE 414
G S +EV N +HEF++GD HPQ + IY K++E+ ++ EGY P V D+E+ EKE
Sbjct: 462 GHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKE 521
Query: 415 WALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRF 474
A+ HSE++AI + LIST + I VVKNLRVC DCH IKL++ + R+I+VRDR+RF
Sbjct: 522 NAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRF 581
Query: 475 HHFENGTCSCGDYW 488
HHF+NG+CSC DYW
Sbjct: 582 HHFKNGSCSCQDYW 595
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 144/287 (50%), Gaps = 14/287 (4%)
Query: 69 AFEVFSRV-KVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN-VRPNEVTIVCVLSAC 126
A +VFS++ K + W +I G G A L+REM+ V P+ T ++ A
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 127 SQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYN 186
+ + + LG IHS + + V +L+++Y+ CGD+ A +VF++M E+D+ +N
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 187 SLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRD 246
S+I G A +G+ EA+ ++ EM ++GI+P T V +L+AC+ G + LG + M +
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK- 250
Query: 247 YGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQ 306
G+ + ++DL +R GR EEA M + + + SL+ ++G + +
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNGFGKEAIE 309
Query: 307 IAKR------LLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+ K LL C T+V + A + G KE + +M+E
Sbjct: 310 LFKYMESTEGLLPCEI----TFVGILYACSHCGMVKEGFEYFRRMRE 352
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 43/204 (21%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H ++K+GL N + L++LY +CG ++A LFDEM +
Sbjct: 241 GKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD--------------- 285
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR-DNVRPNEVTIV 120
K++V WT++I GL NG A++LF+ M+ + + P E+T V
Sbjct: 286 -----------------KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFV 328
Query: 121 CVLSACSQLGALELG-----RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
+L ACS G ++ G R Y + RI+ H G ++++ +R G + KA + +
Sbjct: 329 GILYACSHCGMVKEGFEYFRRMREEYKIEPRIE--HF--GCMVDLLARAGQVKKAYEYIK 384
Query: 176 EMK-ERDVTTYNSLIAGLAMHGRS 198
M + +V + +L+ +HG S
Sbjct: 385 SMPMQPNVVIWRTLLGACTVHGDS 408
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/491 (40%), Positives = 296/491 (60%), Gaps = 5/491 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++HG V+K G R + L+++YGKCG + +++FDE DV + ++
Sbjct: 175 GEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHM-DVASCNALVAGLS 233
Query: 62 EHGLVENAFEVFSRVKVK----DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ V A +F + + V WT+++ V+NG A+DLFREMQ + + PN V
Sbjct: 234 RNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSV 293
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
TI CVL A + + AL GR H + + + VG AL++MY++CG + A +FE M
Sbjct: 294 TIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAM 353
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
R+V ++N++I G AMHG + AV +FR M + +P VTF VL ACS G + G
Sbjct: 354 PYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGR 413
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F M +GI P++EHY C+V LL R G+ ++AYD I M PD + GSLL +C++
Sbjct: 414 SYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRV 473
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
HG + L E A+ L ++G YVLLSN YAS W ++R MK G++KE GCS
Sbjct: 474 HGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVGLKKEKGCS 533
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IE+ N++H + GD HP I +K++ L ++ G++PST+ VLHD+E+ EK+ L
Sbjct: 534 WIEIKNKVHMLLAGDSSHPMMAAITEKLKHLTMEMRRLGFAPSTDYVLHDVEEQEKDDIL 593
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
++HSE+LA+ GLIST T ++V+KNLR+C DCH +K I++ +R+I VRD NRFHHF
Sbjct: 594 SVHSEKLAVALGLISTSHGTPLQVIKNLRICGDCHEAMKFISSFERREIYVRDTNRFHHF 653
Query: 478 ENGTCSCGDYW 488
++G CSC DYW
Sbjct: 654 KDGKCSCADYW 664
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 123/249 (49%), Gaps = 6/249 (2%)
Query: 23 KLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKV---- 78
L+ Y + G DA + D MP VV + +I + HG E A+ + R++
Sbjct: 60 SLLHAYLRFGATADARSVLDGMPH-RTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVE 118
Query: 79 KDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWI 138
+ + W ++ GL R+G A+ M + P+ + C LSA +G + +G +
Sbjct: 119 PNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQL 178
Query: 139 HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRS 198
H Y+ K L+ V ALI+MY +CG D+ ++VF+E DV + N+L+AGL+ + +
Sbjct: 179 HGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQV 238
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGC 258
EA+ +FRE + +GI V++ ++ C G ++F+ M + GIEP C
Sbjct: 239 SEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSE-GIEPNSVTIPC 297
Query: 259 IVDLLSRVG 267
++ + +
Sbjct: 298 VLPAFANIA 306
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 102/250 (40%), Gaps = 42/250 (16%)
Query: 147 IDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
+ + V +L++ Y R G A V + M R V +++LIA A HG + A +
Sbjct: 51 VSRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLE 110
Query: 207 EMINQGIRPTKVTFVGVLNACSHGG--------LVDLGFEIFQSMTR------------- 245
M + G+ P +T+ G+++ + G LV + E F
Sbjct: 111 RMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVG 170
Query: 246 DYGIEPQIEHY----GC---------IVDLLSRVGRPEE---AYDFITNMKIAPDHIMLG 289
D + Q+ Y GC ++D+ + GR +E +D ++M +A + ++
Sbjct: 171 DVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVA 230
Query: 290 SLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
L ++ L+L + R ++ ++ + +G+ EAV + +M+ G
Sbjct: 231 GLSRNAQVSEALRLFREFVGRGIELNVV---SWTSIVACCVQNGRDLEAVDLFREMQSEG 287
Query: 350 VQKEPGCSSI 359
+ EP +I
Sbjct: 288 I--EPNSVTI 295
>gi|212274581|ref|NP_001130403.1| uncharacterized protein LOC100191499 [Zea mays]
gi|194689034|gb|ACF78601.1| unknown [Zea mays]
gi|413932819|gb|AFW67370.1| hypothetical protein ZEAMMB73_996266 [Zea mays]
Length = 606
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/442 (46%), Positives = 284/442 (64%), Gaps = 3/442 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D V T +IN Y E G A F R V + AMI VR+ AL LFREM
Sbjct: 167 HDYVRPT-LINMYAECGDARAARVTFGRADGDCVVSYNAMIAAAVRSSRPGEALVLFREM 225
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
Q + P VT++ VLSAC+ LGAL+LGRW+H Y+ K + V AL++MY++CG +
Sbjct: 226 QAKGLNPTPVTVISVLSACALLGALQLGRWLHDYVRKLGLGSLVKVSTALVDMYAKCGSL 285
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+ A+ VF+ M+ RD ++ +I A HG EA+ +F EM QG++P +TF+G+L AC
Sbjct: 286 EDAIAVFQGMESRDRQAWSVMIVAYANHGYGREAISLFEEMKKQGMKPDDITFLGLLYAC 345
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SH GLV G F M +D+GI P I+HYGC+ DLL+R G+ E AY FI + I P I+
Sbjct: 346 SHSGLVSEGLRYFDDM-KDHGIVPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPIL 404
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+LLSAC HG ++LG+++ +R+L+ + G YV+ SN A++G W+E ++R M +
Sbjct: 405 WRTLLSACGGHGDVELGKRVFERILELDDSHGGDYVIFSNLCANTGYWEEMNRVRKLMSD 464
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH- 406
GV K PGCSSIE++N +HEF GD RHP+ ++ K + E+ +KL GY P T V H
Sbjct: 465 KGVVKVPGCSSIEIDNTVHEFFAGDGRHPKSQEARKMVDEVIDQLKLVGYIPDTSHVFHV 524
Query: 407 DIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKI 466
++ + EK +L HSE+LAI +GL++T P T+RVVKNLRVC DCHSM K ++ + R+I
Sbjct: 525 EMGEEEKAISLKYHSEKLAIAFGLLNTAPGATLRVVKNLRVCPDCHSMAKFVSMVFNRRI 584
Query: 467 IVRDRNRFHHFENGTCSCGDYW 488
I+RD NRFHHFE G CSCGDYW
Sbjct: 585 ILRDLNRFHHFERGICSCGDYW 606
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 151/333 (45%), Gaps = 27/333 (8%)
Query: 69 AFEVFSRV-KVKDTVCWTAMIDGLVRNGEMARA-----LDLFREMQRDNVRPNEVTIVCV 122
A +VF RV + D V + ++ G R+ + + + +F M + V P+ T V +
Sbjct: 80 ARQVFDRVTQPSDAVWYNTLLRGYARSSSSSSSSSAAAVRVFVRMLEEGVAPDTYTFVSL 139
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L AC+ A E GR H+ K + V LINMY+ CGD A F V
Sbjct: 140 LKACAAARAGEHGRQAHAVAVKLGAAGHDYVRPTLINMYAECGDARAARVTFGRADGDCV 199
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
+YN++IA R EA+ +FREM +G+ PT VT + VL+AC+ G + LG
Sbjct: 200 VSYNAMIAAAVRSSRPGEALVLFREMQAKGLNPTPVTVISVLSACALLGALQLG-RWLHD 258
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG--- 299
R G+ ++ +VD+ ++ G E+A M+ + D ++ A HG
Sbjct: 259 YVRKLGLGSLVKVSTALVDMYAKCGSLEDAIAVFQGME-SRDRQAWSVMIVAYANHGYGR 317
Query: 300 -KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
+ L E++ K+ + D T++ L A + SG E ++ MK+ G+ PG
Sbjct: 318 EAISLFEEMKKQGM---KPDDITFLGLLYACSHSGLVSEGLRYFDDMKDHGIV--PGIK- 371
Query: 359 IEVNNEIHEFILGDI--RHPQREQIYKKMQELK 389
H + D+ R Q E+ YK + EL
Sbjct: 372 -------HYGCVTDLLARSGQLERAYKFIDELP 397
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 97/240 (40%), Gaps = 66/240 (27%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H V KLGL S LV++Y KCG +DA+ +F M E D A +VMI Y
Sbjct: 253 GRWLHDYVRKLGLGSLVKVSTALVDMYAKCGSLEDAIAVFQGM-ESRDRQAWSVMIVAYA 311
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG + R A+ LF EM++ ++P+++T +
Sbjct: 312 NHG--------YGR-----------------------EAISLFEEMKKQGMKPDDITFLG 340
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L ACS G + G M H I G + ++ +R G +++A + +E+
Sbjct: 341 LLYACSHSGLVSEGLRYFDDMKDHGIVPGIKHYGCVTDLLARSGQLERAYKFIDELP--- 397
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
I PT + + +L+AC G V+LG +F+
Sbjct: 398 -------------------------------INPTPILWRTLLSACGGHGDVELGKRVFE 426
>gi|359491264|ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 684
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/489 (43%), Positives = 307/489 (62%), Gaps = 3/489 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +HG V+K G SN ++ + +DA ++F++M E DV + T ++ Y
Sbjct: 197 GEIVHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSE-RDVFSWTSLLGGYA 255
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ-RDNVRPNEVTIV 120
+HG ++ A E+F+ + V++ V W MI G + G AL F M D V PNE +V
Sbjct: 256 KHGEMDRACELFNMMPVRNDVSWAVMISGFLGCGRYPEALTFFCNMLCDDRVNPNEAVLV 315
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
CVLSAC+ LGAL+ G WIH Y+ K I + + ALI+MY++CG ID A +VF + +R
Sbjct: 316 CVLSACAHLGALDQGNWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDCASRVFNGICKR 375
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++ S+I+GL+ HG +A+ +F +M+++ + P ++T +GVLN CSH GLV+ G I
Sbjct: 376 DVLSFTSMISGLSYHGLGKDALRVFYQMLDENVMPNEITILGVLNGCSHSGLVEEGSSIL 435
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+M +GI P+IEHYGC +DLL R G E A + + M + PD ++ +LLSA +IH
Sbjct: 436 ANMESLWGIAPKIEHYGCYIDLLGRAGYLERALEVVKTMPMEPDIVIWRALLSASRIHHN 495
Query: 301 LQLGEQIAKRLLDCRSAD-SGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+ LGEQI + +S+D +G VLLSN YAS G+W+ ++R M + + PGCS I
Sbjct: 496 VNLGEQIISHIGQLKSSDHNGGEVLLSNLYASLGRWERVTEMRKLMVDRRSESSPGCSWI 555
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
EVN +HEF + D HPQ +I K+ E+ + + GYS +T V D+ + EKE A+A
Sbjct: 556 EVNGLVHEFRVADQLHPQIVEIRNKLNEILKRLSQIGYSANTMQVSFDLNEEEKEQAVAW 615
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GL+ST+P T IR+VKNLR C DCHS +K I+ + R+I+VRDR+RFH F
Sbjct: 616 HSEKLAIAFGLMSTEPGTLIRIVKNLRTCEDCHSALKTISQVYGREIVVRDRSRFHTFIE 675
Query: 480 GTCSCGDYW 488
G CSC D+W
Sbjct: 676 GDCSCKDFW 684
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 152/379 (40%), Gaps = 63/379 (16%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVAS-TVMINCYV 61
++IH QV+ L SN S L+ Y +A LFD P + + VMI Y
Sbjct: 91 QQIHAQVVTQALSSNASLTASLIHCYLCAKNHPNARILFDHYPSPSPPIKLWNVMIRTYS 150
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ + +F R+ L +G M V P+E T
Sbjct: 151 KIRNSQEPIHLFLRM--------------LTLDGPM-------------QVVPDEYTFTF 183
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V+++CS +L G +H + K + N VG ++INM S ++ A +VF +M ERD
Sbjct: 184 VITSCSHQISLIYGEIVHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSERD 243
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREM--------------------------------I 209
V ++ SL+ G A HG A E+F M
Sbjct: 244 VFSWTSLLGGYAKHGEMDRACELFNMMPVRNDVSWAVMISGFLGCGRYPEALTFFCNMLC 303
Query: 210 NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRP 269
+ + P + V VL+AC+H G +D G I + + GI ++D+ ++ GR
Sbjct: 304 DDRVNPNEAVLVCVLSACAHLGALDQGNWIHLYIDK-IGIRQSSNISTALIDMYAKCGRI 362
Query: 270 EEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVL-LSNA 328
+ A + N D + S++S HG + ++ ++LD + +L + N
Sbjct: 363 DCA-SRVFNGICKRDVLSFTSMISGLSYHGLGKDALRVFYQMLDENVMPNEITILGVLNG 421
Query: 329 YASSGKWKEAVQIRAKMKE 347
+ SG +E I A M+
Sbjct: 422 CSHSGLVEEGSSILANMES 440
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 38/199 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G IH + K+G+R + + L+++Y KCG A ++F+ + + DV++ T MI+
Sbjct: 329 QGNWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDCASRVFNGICK-RDVLSFTSMISGL 387
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HGL ++A V F +M +NV PNE+TI+
Sbjct: 388 SYHGLGKDALRV-------------------------------FYQMLDENVMPNEITIL 416
Query: 121 CVLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
VL+ CS G +E G I + M + H G I++ R G +++AL+V + M
Sbjct: 417 GVLNGCSHSGLVEEGSSILANMESLWGIAPKIEHY--GCYIDLLGRAGYLERALEVVKTM 474
Query: 178 K-ERDVTTYNSLIAGLAMH 195
E D+ + +L++ +H
Sbjct: 475 PMEPDIVIWRALLSASRIH 493
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/496 (41%), Positives = 297/496 (59%), Gaps = 23/496 (4%)
Query: 16 SNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVA--------------STVMINCYV 61
++ T + +L GK G F D L + C D+ A S N +
Sbjct: 241 ADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFF 300
Query: 62 EHGLVE---------NAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
+ L+E +A +F RV+ KDTV W +MI G RNG+ +L LFR M D
Sbjct: 301 TNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGS 360
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
P++VT + VL AC Q+ AL G IHSY+ K D N IVG AL++MYS+CG + + +
Sbjct: 361 GPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRR 420
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
VF+EM ++ + ++++++AG +HGR EA+ + M + P F +L+ACSH GL
Sbjct: 421 VFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGL 480
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
V G EIF M ++Y ++P + HY C+VDLL R G +EAY I M+I P + +LL
Sbjct: 481 VVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALL 540
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
+A ++H ++L E A+++ D +Y+ LSN YA+ +W + ++RA ++ G++K
Sbjct: 541 TASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKK 600
Query: 353 EPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE 412
PGCS IE++N +H F++GD H Q E IY K+ ELKQ +K GY P T +V +D+E+
Sbjct: 601 SPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQQLKEAGYKPDTSLVFYDVEEEV 660
Query: 413 KEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRN 472
KE L HSERLAI + LI+T P T IR+ KNLRVC DCH++ KLI+ +T R+II+RD +
Sbjct: 661 KEKMLWDHSERLAIAFALINTGPGTVIRITKNLRVCGDCHTVTKLISELTGREIIMRDIH 720
Query: 473 RFHHFENGTCSCGDYW 488
RFHHF G CSCGDYW
Sbjct: 721 RFHHFIKGFCSCGDYW 736
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 147/345 (42%), Gaps = 68/345 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H +V+ GL S+ L+ +Y K G+ A +FD M E
Sbjct: 180 GRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAE--------------- 224
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+D W MI G +N + A +F M + + + T++
Sbjct: 225 -----------------RDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLG 267
Query: 122 VLSACSQLGALELGRWIHSYMGKHRI-DLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+LSAC+ L A++ G+ IH Y ++ I + N +LI MY C + A ++FE ++ +
Sbjct: 268 LLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWK 327
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++NS+I G A +G + E++ +FR M G P +VTF+ VL AC + G I
Sbjct: 328 DTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIH 387
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRV-------------------------------GRP 269
+ + G + +VD+ S+ GR
Sbjct: 388 SYLVKK-GFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRG 446
Query: 270 EEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
EA + MK + PD+ + S+LSAC G + G++I ++
Sbjct: 447 REAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKM 491
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 153/350 (43%), Gaps = 41/350 (11%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPEC----NDVVASTVMINCYVEHGLVENAFEVFSRVKVK 79
L++ + FK QL M N+ +T + Y GL+ A +F + +K
Sbjct: 65 LLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLK 124
Query: 80 DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIH 139
++ W MI G NG ++L L+REM R + T VL AC L +E+GR +H
Sbjct: 125 NSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVH 184
Query: 140 SYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSI 199
S + ++ + VG +L+ MY++ GD+ A VF+ M ERD+T++N++I+G A + S
Sbjct: 185 SEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSG 244
Query: 200 EAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRD-------YGIEPQ 252
A +F M G+ T +G+L+AC+ V G I R+ +
Sbjct: 245 TAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSL 304
Query: 253 IEHY---GCIVD---LLSRV------------------GRPEEAYDFITNMKI---APDH 285
IE Y C+VD L RV G E+ M + PD
Sbjct: 305 IEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQ 364
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV--LLSNAYASSG 333
+ ++L AC L+ G I L+ + D+ T V L + Y+ G
Sbjct: 365 VTFIAVLGACDQIAALRYGMSIHSYLVK-KGFDANTIVGTALVDMYSKCG 413
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 39/207 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G IH ++K G +N LV++Y KCG + ++FDEMP+
Sbjct: 383 GMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPD--------------- 427
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K V W+AM+ G +G A+ + M+ ++V P+
Sbjct: 428 -----------------KSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTS 470
Query: 122 VLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
+LSACS G + G+ I M K + L+H ++++ R G +D+A + M+
Sbjct: 471 ILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHY--SCMVDLLGRAGHLDEAYVIIRTME 528
Query: 179 ERDVT-TYNSLIAGLAMHGRSIEAVEM 204
+ + + +L+ +H ++I+ E+
Sbjct: 529 IKPTSDIWAALLTASRLH-KNIKLAEI 554
>gi|225428400|ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
gi|297744424|emb|CBI37686.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/489 (43%), Positives = 296/489 (60%), Gaps = 34/489 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++HG + K GL S+R L+ +Y CG+
Sbjct: 115 GKQLHGLIYKSGLESDRYVSNGLIHMYSSCGK---------------------------- 146
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
A++VF +++ +D V WT+MIDG V + A+ LF EM D V PNE T+V
Sbjct: 147 ----SGRAYKVFGKMRDRDVVSWTSMIDGFVDDDRALEAIRLFEEMVEDGVEPNEATVVS 202
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL AC+ GA+ +GR + + + +I L V ALI+MY++CG I A +VF+ + +D
Sbjct: 203 VLRACADAGAVGMGRRVQGVIEERKIGLEANVRTALIDMYAKCGSIGSARKVFDGIVNKD 262
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V + ++I+GLA HG EAV +F +M + G+RP + T VL+AC + G GF F
Sbjct: 263 VFAWTAMISGLANHGLCEEAVTLFDQMESFGLRPDERTMTAVLSACRNAGWFSEGFAYFN 322
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM YGI+P I+HYGC+VDLL+R G +EA +FI M I PD ++ +L+ A K+HG +
Sbjct: 323 SMWCKYGIKPTIQHYGCMVDLLARTGHLDEAEEFIRKMPIEPDVVLWRTLIWASKVHGDI 382
Query: 302 QLGEQIAKR--LLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
EQ+ K LL S D G+YVLL N YAS+GKW + ++R M + G+ K PGCS I
Sbjct: 383 DRSEQLMKDRGLLKMDSDDCGSYVLLGNVYASAGKWHDKAKMRELMNQKGLSKPPGCSRI 442
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
EV+ +HEF GD H + E+IY K+ E+++ +K EGY P VL +I++ EK + L
Sbjct: 443 EVDGLVHEFAAGDSGHIEAEKIYAKLDEVEERLKAEGYHPKLSEVLLEIDNKEKAFQLRH 502
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LA+ +GLI T P T IR+VKNLR C DCHS++KLI+ I ++ IIVRDR RFHHF N
Sbjct: 503 HSEKLAVAFGLIKTSPGTEIRIVKNLRSCEDCHSVLKLISKIYQQDIIVRDRIRFHHFIN 562
Query: 480 GTCSCGDYW 488
G CSC DYW
Sbjct: 563 GDCSCKDYW 571
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 120/234 (51%), Gaps = 8/234 (3%)
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM--QRDNVRPNEVTIVC 121
G + A + + + +++ MI + + +AL LF M Q + RP++ T
Sbjct: 42 GDLTYAHLILNSLSTQNSFFHNTMIRAYSQTPDPTQALHLFLSMLCQPTSPRPDKFTYPF 101
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L +C++L +G+ +H + K ++ + V LI+MYS CG +A +VF +M++RD
Sbjct: 102 LLKSCARLKQPRVGKQLHGLIYKSGLESDRYVSNGLIHMYSSCGKSGRAYKVFGKMRDRD 161
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ S+I G R++EA+ +F EM+ G+ P + T V VL AC+ G V +G +
Sbjct: 162 VVSWTSMIDGFVDDDRALEAIRLFEEMVEDGVEPNEATVVSVLRACADAGAVGMGRRVQG 221
Query: 242 SM-TRDYGIEPQIEHYGCIVDLLSR---VGRPEEAYDFITNMKIAPDHIMLGSL 291
+ R G+E + ++D+ ++ +G + +D I N + M+ L
Sbjct: 222 VIEERKIGLEANVR--TALIDMYAKCGSIGSARKVFDGIVNKDVFAWTAMISGL 273
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/487 (43%), Positives = 314/487 (64%), Gaps = 10/487 (2%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
R +H + ++L N R L+++Y KCG A ++FDE+ + V MI+ Y
Sbjct: 284 RTLHQKQIQL----NCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTR 339
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPNEVTIVC 121
G +++A E+F+ + ++ V W +MI G +NG+ A A++LF+EM + P+EVT+V
Sbjct: 340 VGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVS 399
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V+SAC LGALELG W+ ++ +++I L+ A+I MYSRCG ++ A +VF+EM RD
Sbjct: 400 VISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRD 459
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +YN+LI+G A HG +EA+ + M GI P +VTF+GVL ACSH GL++ G ++F+
Sbjct: 460 VVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFE 519
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
S+ +P I+HY C+VDLL RVG E+A + M + P + GSLL+A +IH ++
Sbjct: 520 SIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQV 574
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LGE A +L + +SG ++LLSN YAS+G+WK+ +IR MK+ GV+K G S +E
Sbjct: 575 ELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEY 634
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
++H+FI+ D H + + IY+ + EL++ ++ GY VL D+E+ EKE + HS
Sbjct: 635 GGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHS 694
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAICY L+ ++ IRVVKNLRVC DCH+ IK+I+ + R IIVRD NRFH F +G
Sbjct: 695 EKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGL 754
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 755 CSCKDYW 761
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 178/411 (43%), Gaps = 100/411 (24%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN------------- 48
G H VLKLG S+ R ++++Y + G A ++FDE+P+
Sbjct: 114 GIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGY 173
Query: 49 -------------------DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMID 89
+V+ T M+ Y + +E A F + + V W AM+
Sbjct: 174 WKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLS 233
Query: 90 GLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDL 149
G +NG L LF EM + P+E T V V+SACS G L + + + +I L
Sbjct: 234 GYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQL 293
Query: 150 NHIVGGALINMYSRCGDIDKALQVFEE--------------------------------M 177
N V AL++MY++CG I A ++F+E M
Sbjct: 294 NCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTM 353
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN-QGIRPTKVTFVGVLNACSHGGLVDLG 236
R+V T+NS+IAG A +G+S A+E+F+EMI + + P +VT V V++AC H G ++LG
Sbjct: 354 PGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELG 413
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE-------------------------- 270
+ + +T + I+ I + ++ + SR G E
Sbjct: 414 NWVVRFLTENQ-IKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAA 472
Query: 271 -----EAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
EA + ++ MK I PD + +L+AC G L+ G ++ + + D
Sbjct: 473 HGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD 523
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/479 (41%), Positives = 301/479 (62%), Gaps = 3/479 (0%)
Query: 13 GLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPE---CNDVVASTVMINCYVEHGLVENA 69
G+R + T ++++ + + ++ + V +T ++ YV+ G + A
Sbjct: 622 GMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKA 681
Query: 70 FEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQL 129
EVF +++ KD V W AM+ G NG ALDLF MQ + ++P+ + LSAC++L
Sbjct: 682 REVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRL 741
Query: 130 GALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLI 189
GAL+LGR + N ++G ALI+MY++CG +A VF++M+++D+ +N++I
Sbjct: 742 GALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMI 801
Query: 190 AGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGI 249
GL M G A + +M G++ TF+G+L +C+H GL+ G F +MT+ Y I
Sbjct: 802 LGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHI 861
Query: 250 EPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAK 309
P+IEHYGC+VDLLSR G +EA+ + +M + + ++LG+LL CKIH +L E + K
Sbjct: 862 SPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLK 921
Query: 310 RLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFI 369
+L+ +SG YV+LSN Y++ G+W++A ++R MK GV+K P CS +E ++HEF
Sbjct: 922 QLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFR 981
Query: 370 LGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYG 429
+GD HP +QIYKK+ EL +K GY P+TEVV+ D+ED EKE L HSE+LAI +
Sbjct: 982 VGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFN 1041
Query: 430 LISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
L+ T P TIRV KNLRVC+DCH+ IKL++ IT R+IIVRD NRFH F +G+CSC DYW
Sbjct: 1042 LLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 1100
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 131/279 (46%), Gaps = 33/279 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++H + LKL +N L+ LY KCG
Sbjct: 545 GEQLHARSLKLPSHTNPHVLTSLLSLYAKCG----------------------------- 575
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
L+ A VF + TV WTA+I + G++ A+ + R + +RP+ T V
Sbjct: 576 ---LLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVR 632
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL+AC+++ L G + + + + V A +++Y +CG++ KA +VF++M+ +D
Sbjct: 633 VLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKD 692
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ +++ G A +G EA+++F M +G++P G L+AC+ G +DLG + +
Sbjct: 693 AVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIR 752
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
+ D ++ + ++D+ ++ G EA+ M+
Sbjct: 753 MVDWDEFLDNPVLGTA-LIDMYAKCGSTVEAWVVFQQMR 790
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 35/234 (14%)
Query: 114 PNEVTIVCVLSACSQLG-ALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
P+ +TI L + S+L L G +H+ K N V +L+++Y++CG + +A +
Sbjct: 523 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 582
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
VF+EM + +LI G EAV + R G+RP T V VL AC+
Sbjct: 583 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 642
Query: 233 VDLGFEIFQS-------------------------MTRDYGIEPQIEH-----YGCIVDL 262
+ G ++++ M + + ++ H +G +V
Sbjct: 643 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 702
Query: 263 LSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
+ G P EA D M+ + PD + LSAC G L LG Q A R++D
Sbjct: 703 YASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQ-AIRMVD 755
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/496 (42%), Positives = 287/496 (57%), Gaps = 32/496 (6%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFE------------ 71
L+ + + G+ + A LF MPE N V S MI+ YVEHG +E A E
Sbjct: 173 LISGFAQNGQMQKAFDLFSVMPEKNGVSWSA-MISGYVEHGDLEAAEELYKNVGMKSVVV 231
Query: 72 -------------------VFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
+F R+ VK+ V W +MI G V N L +F+ M V
Sbjct: 232 ETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRV 291
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
RPN +++ VL CS L AL LGR +H + K + + +LI+MY +CGD+D A +
Sbjct: 292 RPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWK 351
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
+F EM +DV ++N++I+G A HG +A+ +F +M N ++P +TFV V+ AC+H G
Sbjct: 352 LFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGF 411
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
VDLG + F+SM +++GIE + HY C++DLL R GR +EA I M P + G+LL
Sbjct: 412 VDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLL 471
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
AC+IH L L E A+ LL+ + YV L+N YA++ KW + ++R MKE V K
Sbjct: 472 GACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVK 531
Query: 353 EPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE 412
PG S IE+ + HEF D HP+ I+KK+ EL +KL GY P E LHD+E+
Sbjct: 532 IPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEH 591
Query: 413 KEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRN 472
KE L HSE+LAI +GL+ T P T IRV KNLRVC DCH IK I+ I KR+IIVRD
Sbjct: 592 KEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTT 651
Query: 473 RFHHFENGTCSCGDYW 488
RFHHF NG CSCGDYW
Sbjct: 652 RFHHFRNGFCSCGDYW 667
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 36/220 (16%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H V K L + + L+ +Y KCG+ A +LF EMP DV++ MI+ Y
Sbjct: 314 GRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPR-KDVISWNAMISGYA 372
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+HG A +F + +RNG M +P+ +T V
Sbjct: 373 QHGAGRKALHLFDK----------------MRNGTM---------------KPDWITFVA 401
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+ AC+ G ++LG ++ S + I+ + +I++ R G +D+A+ + +EM +
Sbjct: 402 VILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFK 461
Query: 181 D-VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVT 219
Y +L+ +H A R ++N + PT T
Sbjct: 462 PHAAIYGTLLGACRIHKNLDLAEFAARNLLN--LDPTSAT 499
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/479 (41%), Positives = 301/479 (62%), Gaps = 3/479 (0%)
Query: 13 GLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPE---CNDVVASTVMINCYVEHGLVENA 69
G+R + T ++++ + + ++ + V +T ++ YV+ G + A
Sbjct: 646 GMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKA 705
Query: 70 FEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQL 129
EVF +++ KD V W AM+ G NG ALDLF MQ + ++P+ + LSAC++L
Sbjct: 706 REVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRL 765
Query: 130 GALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLI 189
GAL+LGR + N ++G ALI+MY++CG +A VF++M+++D+ +N++I
Sbjct: 766 GALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMI 825
Query: 190 AGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGI 249
GL M G A + +M G++ TF+G+L +C+H GL+ G F +MT+ Y I
Sbjct: 826 LGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHI 885
Query: 250 EPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAK 309
P+IEHYGC+VDLLSR G +EA+ + +M + + ++LG+LL CKIH +L E + K
Sbjct: 886 SPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLK 945
Query: 310 RLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFI 369
+L+ +SG YV+LSN Y++ G+W++A ++R MK GV+K P CS +E ++HEF
Sbjct: 946 QLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFR 1005
Query: 370 LGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYG 429
+GD HP +QIYKK+ EL +K GY P+TEVV+ D+ED EKE L HSE+LAI +
Sbjct: 1006 VGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFN 1065
Query: 430 LISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
L+ T P TIRV KNLRVC+DCH+ IKL++ IT R+IIVRD NRFH F +G+CSC DYW
Sbjct: 1066 LLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 1124
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 131/279 (46%), Gaps = 33/279 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++H + LKL +N L+ LY KCG
Sbjct: 569 GEQLHARSLKLPSHTNPHVLTSLLSLYAKCG----------------------------- 599
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
L+ A VF + TV WTA+I + G++ A+ + R + +RP+ T V
Sbjct: 600 ---LLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVR 656
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL+AC+++ L G + + + + V A +++Y +CG++ KA +VF++M+ +D
Sbjct: 657 VLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKD 716
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ +++ G A +G EA+++F M +G++P G L+AC+ G +DLG + +
Sbjct: 717 AVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIR 776
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
+ D ++ + ++D+ ++ G EA+ M+
Sbjct: 777 MVDWDEFLDNPVLGTA-LIDMYAKCGSTVEAWVVFQQMR 814
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 35/234 (14%)
Query: 114 PNEVTIVCVLSACSQLG-ALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
P+ +TI L + S+L L G +H+ K N V +L+++Y++CG + +A +
Sbjct: 547 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 606
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
VF+EM + +LI G EAV + R G+RP T V VL AC+
Sbjct: 607 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 666
Query: 233 VDLGFEIFQS-------------------------MTRDYGIEPQIEH-----YGCIVDL 262
+ G ++++ M + + ++ H +G +V
Sbjct: 667 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 726
Query: 263 LSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
+ G P EA D M+ + PD + LSAC G L LG Q A R++D
Sbjct: 727 YASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQ-AIRMVD 779
>gi|115469684|ref|NP_001058441.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|53791823|dbj|BAD53889.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|53792844|dbj|BAD53877.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113596481|dbj|BAF20355.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|125598347|gb|EAZ38127.1| hypothetical protein OsJ_22476 [Oryza sativa Japonica Group]
Length = 648
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/483 (42%), Positives = 300/483 (62%), Gaps = 3/483 (0%)
Query: 8 QVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVE 67
VL G +R L+ Y CG+ A ++FDEM E DV++ T ++ Y G +
Sbjct: 167 SVLVGGFDRHRFVENSLIGAYVACGDVGAARKVFDEMVE-KDVISWTSIVVAYTRSGDMR 225
Query: 68 NAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACS 127
+A EVF R VKD V WTAM+ G +N +AL++F M + +EV++ +SAC+
Sbjct: 226 SAEEVFGRCPVKDMVAWTAMVTGYAQNAMPVKALEVFDRMAELGMVIDEVSLTGAISACA 285
Query: 128 QLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNS 187
QLGAL W+ + N +VG L++MY++CG ID+A +VF M+E++V TY+S
Sbjct: 286 QLGALRRAAWVQEIAERTGFGNNVVVGSGLVDMYAKCGLIDEASKVFYGMQEKNVYTYSS 345
Query: 188 LIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRD 246
+IAGLA HGR+ EA+ +F+EM+N+ + P VTF+GVL ACSH G+V G F M
Sbjct: 346 MIAGLASHGRASEAIALFKEMVNRANVEPNHVTFIGVLTACSHAGMVGEGRYYFAQMKDK 405
Query: 247 YGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQ 306
YGI P +HY C+VDLL R G +EA D + +M + P + G+LL AC+IHGK ++ +
Sbjct: 406 YGIMPSADHYACMVDLLGRAGLVDEALDLVRSMSVTPHGGVWGALLGACRIHGKSEIAKV 465
Query: 307 IAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNE-I 365
+A+ L G YVLLSN AS+GKW+E ++R M++ ++K+P S E + +
Sbjct: 466 VAEHLFKLEPESIGNYVLLSNILASAGKWEEVSKVRILMRKQRLKKDPAVSLFEGRDGLV 525
Query: 366 HEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLA 425
H+F GD HP+ +I K + EL +KLEGY P +++D+ D EKE L HSE+LA
Sbjct: 526 HQFFAGDNAHPRTHEIKKALLELVAKLKLEGYVPILSSIVYDVNDEEKERLLMGHSEKLA 585
Query: 426 ICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCG 485
+ +GL++ TIR++KNLR+C+DCH ++L++ + +IIVRD RFHHF+NG CSCG
Sbjct: 586 LSFGLLTLGSGCTIRIIKNLRICDDCHLFMQLVSRVESVEIIVRDNMRFHHFKNGECSCG 645
Query: 486 DYW 488
+W
Sbjct: 646 GFW 648
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/493 (41%), Positives = 313/493 (63%), Gaps = 28/493 (5%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
IHG V+K GL +NR + L+++Y + G+ K + ++FD M E D+V+ +I YV G
Sbjct: 341 IHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSM-EDRDIVSWNTIITSYVICG 399
Query: 65 LVENAFEVF---SRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+A + R++ K T +G+ + + ++ +PN +T++
Sbjct: 400 RSSDALLLLHEMQRIEEKSTY-----------DGD-------YNDEKQVPFKPNSITLMT 441
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL C+ L AL G+ IH+Y ++ + VG AL++MY++CG ++ A +VF++M R+
Sbjct: 442 VLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRN 501
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQG-----IRPTKVTFVGVLNACSHGGLVDLG 236
V T+N +I MHG+ E++E+F +M+ +G ++PT+VTF+ + +CSH G+VD G
Sbjct: 502 VITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEG 561
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI-MLGSLLSAC 295
+F M ++GIEP +HY CIVDL+ R G+ EEAY + M D + SLL AC
Sbjct: 562 LSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGAC 621
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
+I+ +++GE A+ LL + + YVLLSN Y+S+G W +A+ +R +MK GV+KEPG
Sbjct: 622 RIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPG 681
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
CS IE +E+H+F+ GD+ HPQ E+++ ++ L + +K EGY P T VLHDI++ EKE
Sbjct: 682 CSWIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSERLKKEGYVPDTACVLHDIDEEEKET 741
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
L HSE+LAI +G+++T P TTIRV KNLRVCNDCH+ K I+ I R+II+RD RFH
Sbjct: 742 ILCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHTASKFISKIEDREIILRDARRFH 801
Query: 476 HFENGTCSCGDYW 488
HF++GTCSCGDYW
Sbjct: 802 HFKDGTCSCGDYW 814
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 131/292 (44%), Gaps = 47/292 (16%)
Query: 2 GREIHGQVLKLGLRSNRSTRL--KLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINC 59
G++IH V K G S S + LV +YGKCG DA
Sbjct: 29 GKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDA---------------------- 66
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
++VF R+ +D V W ++I L R E A+ FR M + P+ T+
Sbjct: 67 ----------YKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTL 116
Query: 120 VCVLSACSQL---GALELGRWIHS---YMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
V + ACS L L LG+ IH G R N+ AL+ MY++ G +D A +
Sbjct: 117 VSMALACSNLRKRDGLWLGKQIHGCCFRKGHWRTFSNN----ALMAMYAKLGRLDDAKSL 172
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV 233
++RD+ T+NS+I+ + + R +EA+ R M+ +G++P VTF VL ACSH L+
Sbjct: 173 LVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLL 232
Query: 234 DLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIA 282
G EI R + +VD+ G+ E +D + + KI
Sbjct: 233 RTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIG 284
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 159/379 (41%), Gaps = 61/379 (16%)
Query: 2 GREIHGQVLKLG-LRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
G+EIH L+ + N LV++Y CG+
Sbjct: 235 GKEIHAYALRTDDVIENSFVGSALVDMYCNCGQ--------------------------- 267
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ-RDNVRPNEVTI 119
VE+ VF V + W AMI G ++ +AL LF EM+ + N T+
Sbjct: 268 -----VESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTM 322
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
++ A + + IH Y+ K ++ N + ALI+MYSR GDI + ++F+ M++
Sbjct: 323 SSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMED 382
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREM----------------INQGIRPTKVTFVGV 223
RD+ ++N++I + GRS +A+ + EM +P +T + V
Sbjct: 383 RDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTV 442
Query: 224 LNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAP 283
L C+ + G EI R+ + Q+ +VD+ ++ G A M I
Sbjct: 443 LPGCASLSALAKGKEIHAYAIRNL-LASQVTVGSALVDMYAKCGCLNLARRVFDQMPIR- 500
Query: 284 DHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG-------TYVLLSNAYASSGKWK 336
+ I ++ A +HGK + ++ + ++ A G T++ L + + SG
Sbjct: 501 NVITWNVIIMAYGMHGKGKESLELFEDMV-AEGAKGGEVKPTEVTFIALFASCSHSGMVD 559
Query: 337 EAVQIRAKMK-EAGVQKEP 354
E + + KMK E G++ P
Sbjct: 560 EGLSLFHKMKNEHGIEPAP 578
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRID--LNHIVGGALINMYSRCGDIDKAL 171
P+ VL A + + L LG+ IH+++ K + + L+NMY +CG + A
Sbjct: 8 PDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAY 67
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH 229
+VF+ + ERD ++NS+I+ L A++ FR M+ +G P+ T V + ACS+
Sbjct: 68 KVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSN 125
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 106/246 (43%), Gaps = 31/246 (12%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+EIH ++ L S + LV++Y KCG A ++FD+MP +V+ V+I Y
Sbjct: 454 KGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMP-IRNVITWNVIIMAY 512
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG + + E+F M+ + GE V+P EVT +
Sbjct: 513 GMHGKGKESLELFED-----------MVAEGAKGGE---------------VKPTEVTFI 546
Query: 121 CVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+ ++CS G ++ G H +H I+ ++++ R G +++A + M
Sbjct: 547 ALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPS 606
Query: 180 --RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
V ++SL+ ++ +IE E+ E + Q +V + N S GL D
Sbjct: 607 GFDKVGAWSSLLGACRIY-HNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAM 665
Query: 238 EIFQSM 243
+ + M
Sbjct: 666 NLRRRM 671
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/434 (44%), Positives = 293/434 (67%), Gaps = 1/434 (0%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+++ Y G V +A++VF ++ KD V W ++I+G NG+ AL L+ EM ++P+
Sbjct: 29 LLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPD 88
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
TIV +LSAC+++GAL LG+ +H YM K + N L+++Y+RCG +++A +F+
Sbjct: 89 GFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFD 148
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM-INQGIRPTKVTFVGVLNACSHGGLVD 234
EM +++ ++ SLI GLA++G EA+E+F+ M +G+ P ++TFVG+L ACSH G+V
Sbjct: 149 EMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVK 208
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
GFE F+ M +Y IEP+IEH+GC+VDLL+R G+ ++AY++I +M + P+ ++ +LL A
Sbjct: 209 EGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGA 268
Query: 295 CKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
C +HG L E ++L SG YVLLSN YAS +W + +IR +M GV+K P
Sbjct: 269 CTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVP 328
Query: 355 GCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKE 414
G S +EV N +HEF++GD HPQ + IY K++E+ ++ EGY P V D+E+ EKE
Sbjct: 329 GHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKE 388
Query: 415 WALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRF 474
A+ HSE++AI + LIST + I VVKNLRVC DCH IKL++ + R+I+VRDR+RF
Sbjct: 389 NAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRF 448
Query: 475 HHFENGTCSCGDYW 488
HHF+NG+CSC DYW
Sbjct: 449 HHFKNGSCSCQDYW 462
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 115/225 (51%), Gaps = 12/225 (5%)
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
+ + LG IHS + + V +L+++Y+ CGD+ A +VF++M E+D+ +NS+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 189 IAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYG 248
I G A +G+ EA+ ++ EM ++GI+P T V +L+AC+ G + LG + M + G
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VG 119
Query: 249 IEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIA 308
+ + ++DL +R GR EEA M + + + SL+ ++G + ++
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNGFGKEAIELF 178
Query: 309 KR------LLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
K LL C T+V + A + G KE + +M+E
Sbjct: 179 KYMESTEGLLPCEI----TFVGILYACSHCGMVKEGFEYFRRMRE 219
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 35/200 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H ++K+GL N + L++LY +CG ++A LFDEM +
Sbjct: 108 GKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD--------------- 152
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR-DNVRPNEVTIV 120
K++V WT++I GL NG A++LF+ M+ + + P E+T V
Sbjct: 153 -----------------KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFV 195
Query: 121 CVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
+L ACS G ++ G + +++I+ G ++++ +R G + KA + + M
Sbjct: 196 GILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPM 255
Query: 179 ERDVTTYNSLIAGLAMHGRS 198
+ +V + +L+ +HG S
Sbjct: 256 QPNVVIWRTLLGACTVHGDS 275
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/488 (42%), Positives = 306/488 (62%), Gaps = 2/488 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ HG VL+ G S + L+++Y KC A ++FD M VV ++ YV
Sbjct: 356 GKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN-KTVVTWNSIVAGYV 414
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ-RDNVRPNEVTIV 120
E+G V+ A+E F + K+ V W +I GLV+ A+++F MQ ++ V + VT++
Sbjct: 415 ENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMM 474
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+ SAC LGAL+L +WI+ Y+ K+ I L+ +G L++M+SRCGD + A+ +F + R
Sbjct: 475 SIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR 534
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV+ + + I +AM G + A+E+F +MI QG++P V FVG L ACSHGGLV G EIF
Sbjct: 535 DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIF 594
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM + +G+ P+ HYGC+VDLL R G EEA I +M + P+ ++ SLL+AC++ G
Sbjct: 595 YSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGN 654
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+++ A+++ +G+YVLLSN YAS+G+W + ++R MKE G++K PG SSI+
Sbjct: 655 VEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQ 714
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+ + HEF GD HP+ I + E+ Q G+ P VL D+++ EK + L+ H
Sbjct: 715 IRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRH 774
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LA+ YGLIS+ TTIR+VKNLRVC+DCHS K + + R+II+RD NRFH+ G
Sbjct: 775 SEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQG 834
Query: 481 TCSCGDYW 488
CSCGD+W
Sbjct: 835 KCSCGDFW 842
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 130/254 (51%), Gaps = 44/254 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +IHG ++K+G + + LV Y +CGE
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGE---------------------------- 184
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN-VRPNEVTIV 120
+++A +VF + ++ V WT+MI G R A+DLF M RD V PN VT+V
Sbjct: 185 ----LDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMV 240
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
CV+SAC++L LE G +++++ I++N ++ AL++MY +C ID A ++F+E
Sbjct: 241 CVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGAS 300
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------H 229
++ N++ + G + EA+ +F M++ G+RP +++ + +++CS H
Sbjct: 301 NLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCH 360
Query: 230 GGLVDLGFEIFQSM 243
G ++ GFE + ++
Sbjct: 361 GYVLRNGFESWDNI 374
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 162/368 (44%), Gaps = 70/368 (19%)
Query: 46 ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
E ND++ S +++ Y++ ++ A +F + AM VR G AL +F
Sbjct: 268 EVNDLMVSA-LVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFN 326
Query: 106 EMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG 165
M VRP+ ++++ +S+CSQL + G+ H Y+ ++ + + ALI+MY +C
Sbjct: 327 LMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCH 386
Query: 166 DIDKALQVFEEMKERDVTTYNSLIAGLAMHG--------------RSI------------ 199
D A ++F+ M + V T+NS++AG +G ++I
Sbjct: 387 RQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQ 446
Query: 200 -----EAVEMFREMINQ-GIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQI 253
EA+E+F M +Q G+ VT + + +AC H G +DL I+ + ++ GI+ +
Sbjct: 447 GSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQLDV 505
Query: 254 EHYGCIVDLLSRVGRPEEA---YDFITNMKIA---------------------------- 282
+VD+ SR G PE A ++ +TN ++
Sbjct: 506 RLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQ 565
Query: 283 ---PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR--SADSGTYVLLSNAYASSGKWKE 337
PD + L+AC G +Q G++I +L S + Y + + +G +E
Sbjct: 566 GLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEE 625
Query: 338 AVQIRAKM 345
AVQ+ M
Sbjct: 626 AVQLIEDM 633
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 114/220 (51%), Gaps = 6/220 (2%)
Query: 48 NDVVASTVMINCYVEHGLVEN---AFEVFSRVKVKDT-VCWTAMIDGLVRNGEMARALDL 103
NDV T ++ E G E+ A EVF + T + ++I G +G A+ L
Sbjct: 62 NDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILL 121
Query: 104 FREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSR 163
F M + P++ T LSAC++ A G IH + K + V +L++ Y+
Sbjct: 122 FLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAE 181
Query: 164 CGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI-NQGIRPTKVTFVG 222
CG++D A +VF+EM ER+V ++ S+I G A + +AV++F M+ ++ + P VT V
Sbjct: 182 CGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVC 241
Query: 223 VLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDL 262
V++AC+ ++ G +++ + R+ GIE +VD+
Sbjct: 242 VISACAKLEDLETGEKVY-AFIRNSGIEVNDLMVSALVDM 280
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/489 (44%), Positives = 297/489 (60%), Gaps = 12/489 (2%)
Query: 1 EGREIHGQV-LKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINC 59
E REI ++ LK G+ N L+ Y + G +DA +LF+ + + V NC
Sbjct: 75 EAREIFYKMPLKNGISWN-----GLLAAYVQNGRIEDAKRLFESKMDW-----TLVSWNC 124
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
+ G V +F + +D++ W+AMI G +NG AL F EMQRD R N +
Sbjct: 125 LMG-GFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSF 183
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
C LS CS + ALELGR +H + K VG AL+ MY +CG ID+A F+E+ E
Sbjct: 184 TCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILE 243
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+DV ++N++I G A HG EA+ +F M GIRP T V VL ACSH GLVD G E
Sbjct: 244 KDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEY 303
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F SM RDYGI ++ HY C+VDLL R G+ EEA + + NM PD G+LL A +IHG
Sbjct: 304 FYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHG 363
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+LGE+ A+ + + +SG Y+LLS YA+SG+W +A ++R +M+ GV+K PG S +
Sbjct: 364 NTELGEKAAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVKKVPGYSWL 423
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
EV N+IH F +GD HP ++IY ++E+ +K EGY ST +V HD+E+ EK L
Sbjct: 424 EVQNKIHTFKVGDTSHPHTDKIYTFLEEMDLKLKQEGYISSTNLVFHDVEEEEKVHMLKY 483
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LA+ YG++ IRV+KNLRVC DCH+ IK I+ I R II+RD +RFH+FE
Sbjct: 484 HSEKLAVAYGILYIPAGRPIRVIKNLRVCEDCHNAIKYISKIVGRLIILRDNHRFHYFEG 543
Query: 480 GTCSCGDYW 488
G+CSC D+W
Sbjct: 544 GSCSCRDFW 552
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/487 (41%), Positives = 288/487 (59%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G++IHG ++++GL S+ L+++YGKCG
Sbjct: 270 GKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGS---------------------------- 301
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+E A +F +++ +D V WT MI ++NG LFR + N+ PN+ T
Sbjct: 302 ----IEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAG 357
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL+AC+ L A +LG+ IH+YM + D AL++MYS+CGDI+ A VFE + + D
Sbjct: 358 VLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPD 417
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++ SL+ G A HG+ +A+ F ++ G +P + F+GVL+AC+H GLVD G E F
Sbjct: 418 LFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFH 477
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
S+ +G+ I+HY CI+DLL+R G+ EA I M I PD + +LL C+IHG L
Sbjct: 478 SIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNL 537
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+L ++ AK L + + TYV L+N YAS+G E IR M G+ K+PG S IE+
Sbjct: 538 ELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGMSWIEI 597
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
E+H F +GD HP+ ++I + + EL + +K GY P T VLHD+E +KE L+ HS
Sbjct: 598 RREVHVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFVLHDVELEQKEENLSYHS 657
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ +G+IST T I+V KNLR C DCH+ IK I+NIT RKIIVRD NRFH FE G+
Sbjct: 658 EKLAVAFGIISTPSGTPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFHCFEGGS 717
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 718 CSCKDYW 724
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 187/353 (52%), Gaps = 14/353 (3%)
Query: 1 EGREIHGQVL---KLGLR-SNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVM 56
EG+++H + +GL SNR L+++Y KCG DA ++FDEM D+ + +M
Sbjct: 137 EGKQVHAHIKTSGSIGLYISNR-----LLDMYAKCGSLVDAEKVFDEMVH-RDLCSWNIM 190
Query: 57 INCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR-DNVRPN 115
I+ YV+ G E A +F ++ +D WTA+I G V++ AL+L+R MQ+ D + N
Sbjct: 191 ISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSN 250
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
+ TI L+A + + +L +G+ IH ++ + +D + +V +L++MY +CG I++A +F+
Sbjct: 251 KCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFD 310
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
+M+ERDV ++ ++I +GR E +FR ++N I P TF GVLNAC+ DL
Sbjct: 311 KMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDL 370
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G +I M R G + +V + S+ G E A + + PD SLL
Sbjct: 371 GKQIHAYMVR-VGFDSFSSAASALVHMYSKCGDIENAKS-VFEILPQPDLFSWTSLLVGY 428
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSG-TYVLLSNAYASSGKWKEAVQIRAKMKE 347
HG+ + LL + G ++ + +A A +G + ++ +KE
Sbjct: 429 AQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKE 481
>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/489 (44%), Positives = 307/489 (62%), Gaps = 2/489 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GREIH GL N ++ +YGKCG DA F+E+ N V + +M N Y
Sbjct: 183 QGREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTN-Y 241
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ-RDNVRPNEVTI 119
G A E+F + D+VCW AMI ++G +ALDL+R M ++ P + T
Sbjct: 242 KLDGRDREALELFREMHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTF 301
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V V+ C++L AL+ GR IH+ + D N +V AL++MY +CG +D+AL VF MK
Sbjct: 302 VTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKL 361
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+D ++N++I+ A HG S +A+ +++EM QG++PT+VTFVG+L+ACSHGGLV G +
Sbjct: 362 KDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDY 421
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F M D+ I+P + H+GCI+DLL R GR EA + +M I + + SLL ACK HG
Sbjct: 422 FYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHG 481
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
L+ G + A +++D SG YVLLSN YA++G+WK+ +IR M GV+K PG S I
Sbjct: 482 DLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWI 541
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E+ + +HEF+ GD HPQ E+IY ++ ++ + +K GY P T V HD+E+ EKE L
Sbjct: 542 EIGDVVHEFVSGDSSHPQGEEIYVELGKMVEEMKGLGYVPDTSSVFHDLEEEEKEDLLVC 601
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI YG + + +R+VKNLRVC DCH+ K ++ IT RKI+VRD RFH FEN
Sbjct: 602 HSEKLAIVYGNMVVPGKSMLRIVKNLRVCLDCHTATKFMSRITGRKIVVRDAARFHLFEN 661
Query: 480 GTCSCGDYW 488
G+CSC DYW
Sbjct: 662 GSCSCRDYW 670
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 141/334 (42%), Gaps = 70/334 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLK--LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINC 59
R +H +L L +++ L L+E+YGKCG A +LF+ MP
Sbjct: 79 ARRLHSHILSLPHSNSQPPFLANLLIEMYGKCGRLPYARELFESMPS------------- 125
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
++ WT + NG + AL FR M + RP+ VT
Sbjct: 126 -------------------RNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGERPDRVTF 166
Query: 120 VCVL--SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID--------- 168
+L A A++ GR IH Y + N +VG A+I+MY +CG +D
Sbjct: 167 SVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEEL 226
Query: 169 ----------------------KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
+AL++F EM + D +N++IA A HGR +A++++R
Sbjct: 227 QWKNSVTWNAMMTNYKLDGRDREALELFREMHDADSVCWNAMIAAYAQHGRGKQALDLYR 286
Query: 207 EMIN-QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSR 265
M + + P + TFV V++ C+ + G I + R + + +V + +
Sbjct: 287 SMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAI-HARVRATNFDANLLVSNALVHMYGK 345
Query: 266 VGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
G +EA D +MK+ D I +++S+ HG
Sbjct: 346 CGCLDEALDVFHSMKLK-DEISWNTIISSYAYHG 378
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/472 (43%), Positives = 302/472 (63%), Gaps = 1/472 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ IH LK+G S + + L+ +Y KCG+ A +LFDE D+++ MI+ Y+
Sbjct: 260 GKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDE-AYLLDLISWNSMISGYL 318
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ LV+NA +F + KD V W++MI G +N L LF+EMQ +P+E T+V
Sbjct: 319 KCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVS 378
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V+SAC++L ALE G+W+H+Y+ ++ + +N I+G LI+MY +CG ++ AL+VF M E+
Sbjct: 379 VISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKG 438
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
++T+N+LI GLAM+G +++MF M + P ++TF+GVL AC H GLVD G F
Sbjct: 439 ISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFY 498
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM D+ I+P ++HYGC+VDLL R G+ +EA + + M + PD G+LL ACK HG
Sbjct: 499 SMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDS 558
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++G ++ ++L++ + G +VLLSN YAS GKW + ++IR M + V K PGCS IE
Sbjct: 559 EMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEA 618
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N IHEF+ GD HP + I + E+ +KLEGY+P VL D+++ EKE L HS
Sbjct: 619 NGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKESTLFRHS 678
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNR 473
E+LAI +GLI+ P T IR++KNLR+CNDCH+ KLI+ RKI+ R +
Sbjct: 679 EKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVFLFRGQ 730
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 34/200 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ +H + + GL N L+++Y KC
Sbjct: 391 QGKWVHAYIKRNGLTINVILGTTLIDMYMKC----------------------------- 421
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G VE A EVF + K W A+I GL NG + +LD+F M++ +V PNE+T +
Sbjct: 422 ---GCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFM 478
Query: 121 CVLSACSQLGALELGR-WIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
VL AC +G ++ G+ +S + H+I N G ++++ R G + +A ++ M
Sbjct: 479 GVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPM 538
Query: 179 ERDVTTYNSLIAGLAMHGRS 198
DV T+ +L+ HG S
Sbjct: 539 TPDVATWGALLGACKKHGDS 558
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 110/262 (41%), Gaps = 19/262 (7%)
Query: 72 VFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGA 131
+F+ ++ + W MI ++ A L++ M + + + T ++ ACS +
Sbjct: 34 IFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRS 93
Query: 132 LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAG 191
+ +H+++ K D + V LIN +S C ++ A +VF E D ++NS++AG
Sbjct: 94 EWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAG 153
Query: 192 LAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEP 251
G EA ++ +M + I + V GLV ++F M +E
Sbjct: 154 YIEIGNVEEAKHIYHQMPERSIIASNSMIV----LFGMRGLVVEACKLFDEM-----LEK 204
Query: 252 QIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIA 308
+ + ++ + EEA M + D ++ S LSAC + +G
Sbjct: 205 DMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMG---- 260
Query: 309 KRLLDCRSADSGT--YVLLSNA 328
+L+ S GT Y+ L NA
Sbjct: 261 -KLIHSLSLKIGTESYINLQNA 281
>gi|413937223|gb|AFW71774.1| hypothetical protein ZEAMMB73_242527 [Zea mays]
Length = 625
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/488 (43%), Positives = 310/488 (63%), Gaps = 6/488 (1%)
Query: 6 HGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN-DVVASTVMINCYVEHG 64
HGQ LK G ++ L++LY G DA ++FD + D + M++ Y + G
Sbjct: 139 HGQALKHGALAHPVVTNCLLKLYCALGMLSDARRVFDTSGATSLDAFSWNTMVSGYGKCG 198
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
+E A EVF R+ + V W+AMID +R GE + AL +F +M + RP+ V + VL
Sbjct: 199 DLEAAREVFVRMPERGLVSWSAMIDACIRAGEFSEALRMFDQMMGNGFRPDAVVLSSVLK 258
Query: 125 ACSQLGALELGRWIHSYM---GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
AC+ LGALE GRW+H ++ G R N ++ AL++MY +CG +D+A VF+ ++ +D
Sbjct: 259 ACAHLGALERGRWVHRFLKAEGLGRSPDNVMLETALVDMYCKCGCMDEAWWVFDGVQSQD 318
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +N++I GLAM+G A+E+FR M++ G P + TFV VL AC+H G VD G EIF+
Sbjct: 319 VVLWNAMIGGLAMNGHGKRALELFRRMLDMGFVPNESTFVVVLCACTHTGRVDEGKEIFR 378
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM D+GIEP+ EHYGC+ DLL R G EEA + +M + P G+L+S+C +H +
Sbjct: 379 SMC-DHGIEPRREHYGCLADLLGRAGLLEEAEAVLLDMPMEPHASQWGALMSSCLMHNNV 437
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+GE++ K+L++ D G YV+L N YA +G W++A +R M+E G +KE G S IE
Sbjct: 438 GVGERVGKKLIELEPDDGGRYVVLFNLYAVNGLWEDAKALRKMMEERGAKKETGLSFIEW 497
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE-KEWALAIH 420
N +HEF GD RHPQ QIY +++++Q ++L GY T VL D++D E K L+ H
Sbjct: 498 NGLVHEFRSGDTRHPQTRQIYALLEDMEQRLQLIGYVKDTSQVLMDMDDEEDKGNTLSYH 557
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLA+ +G+++T + IR+VKNLRVC DCH KL++ + +R+II+RDR+RFH F G
Sbjct: 558 SERLALAFGILNTPRHMPIRIVKNLRVCRDCHVYAKLVSKLYQREIIMRDRHRFHLFRGG 617
Query: 481 TCSCGDYW 488
CSC D+W
Sbjct: 618 VCSCNDFW 625
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/465 (44%), Positives = 288/465 (61%), Gaps = 25/465 (5%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D +++ Y G VE + +F R+ +D V W MI G + G AL+L EMQ
Sbjct: 671 DKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQ 730
Query: 109 RDN------------------VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLN 150
R +PN VT++ VL C+ L AL G+ IH+Y K ++ ++
Sbjct: 731 RRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMD 790
Query: 151 HIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
VG AL++MY++CG ++ A +VF++M R+V T+N LI MHG+ EA+E+FR M
Sbjct: 791 VAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTA 850
Query: 211 QG------IRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLS 264
G IRP +VT++ + ACSH G+VD G +F +M +G+EP+ +HY C+VDLL
Sbjct: 851 GGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLG 910
Query: 265 RVGRPEEAYDFITNMKIAPDHI-MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV 323
R GR +EAY+ I M + + SLL AC+IH ++ GE AK L + YV
Sbjct: 911 RSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYV 970
Query: 324 LLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYK 383
L+SN Y+S+G W +A+ +R KMKE GV+KEPGCS IE +E+H+F+ GD HPQ +++++
Sbjct: 971 LMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQSKELHE 1030
Query: 384 KMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVK 443
++ L Q ++ EGY P VLH+++D EKE L HSERLAI +GL++T P TTIRV K
Sbjct: 1031 YLETLSQRMRKEGYVPDISCVLHNVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVAK 1090
Query: 444 NLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
NLRVCNDCH K+I+ I R+II+RD RFHHF NGTCSCGDYW
Sbjct: 1091 NLRVCNDCHVATKIISKIVDREIILRDVRRFHHFANGTCSCGDYW 1135
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 114/241 (47%), Gaps = 36/241 (14%)
Query: 2 GREIHGQVLKLGLRSNRSTRL--KLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINC 59
G++IH V K G S + LV +YGKCG+
Sbjct: 349 GKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGD-------------------------- 382
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
+ A +VF + +D V W +MI L R E +L LFR M +NV P T+
Sbjct: 383 ------LTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTL 436
Query: 120 VCVLSACSQL-GALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
V V ACS + G + LG+ +H+Y ++ DL AL+ MY+R G ++ A +F
Sbjct: 437 VSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTNNALVTMYARLGRVNDAKALFGVFD 495
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
+D+ ++N++I+ L+ + R EA+ MI G+RP VT VL ACS + +G E
Sbjct: 496 GKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGRE 555
Query: 239 I 239
I
Sbjct: 556 I 556
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 124/262 (47%), Gaps = 28/262 (10%)
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
+ ++ Y G V +A +F KD V W +I L +N AL M D V
Sbjct: 471 NNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGV 530
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDL--NHIVGGALINMYSRCGDIDKA 170
RP+ VT+ VL ACSQL L +GR IH Y ++ DL N VG AL++MY C K
Sbjct: 531 RPDGVTLASVLPACSQLERLRIGREIHCYALRNG-DLIENSFVGTALVDMYCNCKQPKKG 589
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACS- 228
VF+ + R V +N+L+AG A + +A+ +F EMI++ P TF VL AC
Sbjct: 590 RLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVR 649
Query: 229 ----------HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITN 278
HG +V GF G + +++ ++D+ SR+GR E +
Sbjct: 650 CKVFSDKEGIHGYIVKRGF----------GKDKYVQN--ALMDMYSRMGRVEISKTIFGR 697
Query: 279 MKIAPDHIMLGSLLSACKIHGK 300
M D + ++++ C + G+
Sbjct: 698 MN-KRDIVSWNTMITGCIVCGR 718
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 119/259 (45%), Gaps = 35/259 (13%)
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W ++ + A+ + M P+ VL A + + L LG+ IH+++
Sbjct: 298 WIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAHVF 357
Query: 144 K--HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEA 201
K H + V +L+NMY +CGD+ A QVF+++ +RD ++NS+IA L +
Sbjct: 358 KFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELS 417
Query: 202 VEMFREMINQGIRPTKVTFVGVLNACSH-GGLVDLGFEIFQSMTRD-------------- 246
+ +FR M+++ + PT T V V +ACSH G V LG ++ R+
Sbjct: 418 LHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLRTYTNNALVTM 477
Query: 247 -------------YGI--EPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIML 288
+G+ + + ++ LS+ R EEA ++ M + PD + L
Sbjct: 478 YARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTL 537
Query: 289 GSLLSACKIHGKLQLGEQI 307
S+L AC +L++G +I
Sbjct: 538 ASVLPACSQLERLRIGREI 556
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 150/383 (39%), Gaps = 79/383 (20%)
Query: 2 GREIHGQVLKLG-LRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
GREIH L+ G L N LV++Y C + K +FD VV TV +
Sbjct: 553 GREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFD------GVVRRTVAV--- 603
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPNEVTI 119
W A++ G RN +AL LF EM PN T
Sbjct: 604 -----------------------WNALLAGYARNEFDDQALRLFVEMISESEFCPNATTF 640
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
VL AC + IH Y+ K + V AL++MYSR G ++ + +F M +
Sbjct: 641 ASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNK 700
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMI-NQG-----------------IRPTKVTFV 221
RD+ ++N++I G + GR +A+ + EM QG +P VT +
Sbjct: 701 RDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLM 760
Query: 222 GVLNACSHGGLVDLGFEIF-----QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFI 276
VL C+ + G EI Q + D + +VD+ ++ G A
Sbjct: 761 TVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVG------SALVDMYAKCGCLNLASRVF 814
Query: 277 TNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG-----------TYVLL 325
M I + I L+ A +HGK GE+ A L +A G TY+ +
Sbjct: 815 DQMPIR-NVITWNVLIMAYGMHGK---GEE-ALELFRIMTAGGGSNREVIRPNEVTYIAI 869
Query: 326 SNAYASSGKWKEAVQIRAKMKEA 348
A + SG E + + MK +
Sbjct: 870 FAACSHSGMVDEGLHLFHTMKAS 892
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 118/264 (44%), Gaps = 38/264 (14%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+EIH +K L + + LV++Y KCG A ++FD+MP +V+ V+I Y
Sbjct: 774 KGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMP-IRNVITWNVLIMAY 832
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG E A E+F R + R+ +RPNEVT +
Sbjct: 833 GMHGKGEEALELF-------------------------RIMTAGGGSNREVIRPNEVTYI 867
Query: 121 CVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+ +ACS G ++ G H+ H ++ L+++ R G + +A ++ M
Sbjct: 868 AIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPS 927
Query: 180 --RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVT-FVGVLNACSHGGLVDLG 236
V ++SL+ +H +S+E E+ + + + P + +V + N S GL D
Sbjct: 928 NLNKVDAWSSLLGACRIH-QSVEFGEIAAKHLFV-LEPNVASHYVLMSNIYSSAGLWDQA 985
Query: 237 FEIFQSMTRDYGI--EP---QIEH 255
+ + M ++ G+ EP IEH
Sbjct: 986 LGVRKKM-KEMGVRKEPGCSWIEH 1008
>gi|357133649|ref|XP_003568436.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Brachypodium distachyon]
Length = 610
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/488 (41%), Positives = 303/488 (62%), Gaps = 2/488 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++HG + S+ + L+++Y KCG DA ++FD + N V+ T +I+ YV
Sbjct: 124 GKQLHGHFVASPYSSDDVVKSSLIDMYCKCGVPDDARKVFDSIVAKNSVMW-TALISGYV 182
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+G + A E+F + + WTA+I G VR+GE A+ LF +M+RD V ++ ++
Sbjct: 183 LNGRSDEALELFRSMPGRTLFAWTALISGFVRSGESVSAVKLFVDMRRDGVSIDDAFVLS 242
Query: 122 -VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+ + L A LGR +HS + + IVG A+++MYS+C DI A +VFEE+ R
Sbjct: 243 SAIGGAADLAAHVLGRQLHSLTMRLGFSSSMIVGNAVVDMYSKCSDIHSAREVFEEITGR 302
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D+ ++ +++ G A HGR+ EA ++ M+ G++P +VTFVG++ ACSH GLV G ++F
Sbjct: 303 DIISWTTMLVGEAQHGRAEEAFSLYDRMVLAGVKPNEVTFVGLIYACSHAGLVQKGRQLF 362
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM +YGI P+++HY C +DLLSR G EA + IT M PD SLLSACK +
Sbjct: 363 DSMKGEYGINPRLQHYTCYLDLLSRSGHLAEAEELITTMPYVPDEATWASLLSACKKYNN 422
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++ ++A LL+ R TYVLLSN YA +GKW +R M + ++KEPG S IE
Sbjct: 423 AEMSIRVADNLLELRPKYPSTYVLLSNVYAVNGKWDSVDTVRKLMADMEIRKEPGYSWIE 482
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
V E F G++ RE+I ++EL ++ GY P T V+HD+E+ EKE L +H
Sbjct: 483 VGREFRLFHAGEVPIDLREEILGFLEELVSEMRQRGYVPDTSSVMHDLEEHEKEHHLCLH 542
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLA+ +G++ + + IRVVKNLRVCNDCH+++K I+ I +RKIIVRD +RFHHFE G
Sbjct: 543 SERLAVAFGILRSPLGSVIRVVKNLRVCNDCHTVMKFISEIFQRKIIVRDASRFHHFEGG 602
Query: 481 TCSCGDYW 488
CSC ++W
Sbjct: 603 KCSCSEFW 610
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 150/360 (41%), Gaps = 55/360 (15%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
R H +++K GL + LV Y K D LFDE P
Sbjct: 23 RRAHARLIKEGLAQHPPAPALLVSAYAKSRLLPDTRLLFDETPR---------------- 66
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPNEVTIVC 121
+D +++++ + + L L R M D +RP+ +
Sbjct: 67 ----------------RDLHLYSSLLAAVSHSESPELVLPLLRRMLSADALRPDHFVLAS 110
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+ SA ++L +L LG+ +H + + +V +LI+MY +CG D A +VF+ + ++
Sbjct: 111 IASATARLRSLCLGKQLHGHFVASPYSSDDVVKSSLIDMYCKCGVPDDARKVFDSIVAKN 170
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ +LI+G ++GRS EA+E+FR M + T + +++ G ++F
Sbjct: 171 SVMWTALISGYVLNGRSDEALELFRSMPGR----TLFAWTALISGFVRSGESVSAVKLFV 226
Query: 242 SMTRD-YGIEPQI---EHYGCIVDLLSRV-GRPEEAYDFITNMKIAPDHIMLGSLL---S 293
M RD I+ G DL + V GR + + + + I+ +++ S
Sbjct: 227 DMRRDGVSIDDAFVLSSAIGGAADLAAHVLGR--QLHSLTMRLGFSSSMIVGNAVVDMYS 284
Query: 294 ACK-IHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
C IH ++ E+I R D ++ + A G+ +EA + +M AGV+
Sbjct: 285 KCSDIHSAREVFEEITGR-------DIISWTTMLVGEAQHGRAEEAFSLYDRMVLAGVKP 337
>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/453 (43%), Positives = 292/453 (64%), Gaps = 13/453 (2%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVR------------NGE 96
D ++N Y ++G + + +F ++ D W M+ + + +
Sbjct: 139 DPFVQNSLLNFYAKYGKLCVSRYLFDQISEPDLATWNTMLAAYAQSASHVSYSTSFEDAD 198
Query: 97 MA-RALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGG 155
M+ AL LF +MQ ++PNEVT+V ++SACS LGAL G W H Y+ ++ + LN VG
Sbjct: 199 MSLEALHLFCDMQLSQIKPNEVTLVALISACSNLGALSQGAWAHGYVLRNNLKLNRFVGT 258
Query: 156 ALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRP 215
AL++MYS+CG ++ A Q+F+E+ +RD YN++I G A+HG +A+E++R M + + P
Sbjct: 259 ALVDMYSKCGCLNLACQLFDELSDRDTFCYNAMIGGFAVHGHGNQALELYRNMKLEDLVP 318
Query: 216 TKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDF 275
T V + ACSHGGLV+ G EIF+SM +G+EP++EHYGC++DLL R GR +EA +
Sbjct: 319 DGATIVVTMFACSHGGLVEEGLEIFESMKGVHGMEPKLEHYGCLIDLLGRAGRLKEAEER 378
Query: 276 ITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKW 335
+ +M + P+ I+ SLL A K+HG L++GE K L++ SG YVLLSN YAS G+W
Sbjct: 379 LQDMPMKPNAILWRSLLGAAKLHGNLEMGEAALKHLIELEPETSGNYVLLSNMYASIGRW 438
Query: 336 KEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLE 395
+ ++R MK+ GV K PG S +E+N +HEF+ GD HP ++IY K+ E+ + +
Sbjct: 439 NDVKRVRMLMKDHGVDKLPGFSLVEINGAMHEFLTGDKAHPFSKEIYSKIGEINRRLLEY 498
Query: 396 GYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMI 455
G+ P T VL D+E+ +KE L+ HSERLAI + LI++ IR++KNLRVC DCH++
Sbjct: 499 GHKPRTSEVLFDVEEEDKEDFLSYHSERLAIAFALIASSSSMPIRIIKNLRVCGDCHAIT 558
Query: 456 KLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
KLI+ +R IIVRDRNRFHHF++G+CSC DYW
Sbjct: 559 KLISAAYQRDIIVRDRNRFHHFKDGSCSCLDYW 591
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 89/184 (48%), Gaps = 16/184 (8%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMAR-ALDLFRE-MQRDNVRPNEVTIVCVLSAC 126
AF +F+ + + +I L + + A L+ + ++PN T + AC
Sbjct: 55 AFTIFNHIPNPTLFLYNTLISSLTHHSDQIHLAFSLYNHILTHKTLQPNSFTFPSLFKAC 114
Query: 127 SQLGALELGRWIHSYMGKH-RIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTY 185
+ L+ G +H+++ K + + V +L+N Y++ G + + +F+++ E D+ T+
Sbjct: 115 ASHPWLQHGPPLHAHVLKFLQPPYDPFVQNSLLNFYAKYGKLCVSRYLFDQISEPDLATW 174
Query: 186 NSLIAGLAMHGR-------------SIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
N+++A A S+EA+ +F +M I+P +VT V +++ACS+ G
Sbjct: 175 NTMLAAYAQSASHVSYSTSFEDADMSLEALHLFCDMQLSQIKPNEVTLVALISACSNLGA 234
Query: 233 VDLG 236
+ G
Sbjct: 235 LSQG 238
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 85/198 (42%), Gaps = 34/198 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G HG VL+ L+ NR LV++Y KCG A QLFDE+ + D MI +
Sbjct: 237 QGAWAHGYVLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDELSD-RDTFCYNAMIGGF 295
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG A E++ +K++D V P+ TIV
Sbjct: 296 AVHGHGNQALELYRNMKLEDLV-------------------------------PDGATIV 324
Query: 121 CVLSACSQLGALELGRWIHSYM-GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+ ACS G +E G I M G H ++ G LI++ R G + +A + ++M
Sbjct: 325 VTMFACSHGGLVEEGLEIFESMKGVHGMEPKLEHYGCLIDLLGRAGRLKEAEERLQDMPM 384
Query: 180 R-DVTTYNSLIAGLAMHG 196
+ + + SL+ +HG
Sbjct: 385 KPNAILWRSLLGAAKLHG 402
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/494 (39%), Positives = 310/494 (62%), Gaps = 7/494 (1%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR +H +L+ GL S + LV +Y KCG ++A ++F+ M D VA + +I Y
Sbjct: 326 QGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKN-RDAVAWSTLIGAY 384
Query: 61 VEHGL---VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ-RDNVRPNE 116
+G A +VF R+ +DT+CW AMI V+NG A+ +FREM ++P+
Sbjct: 385 ASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDA 444
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
VT + VL AC+ LG L + +H+ + + ++ N +V LINMY+RCG +++A ++F
Sbjct: 445 VTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAA 504
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
KE+ V ++ +++A + +GR EA+++F+EM +G++P VT+ +L C+HGG ++ G
Sbjct: 505 AKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQG 564
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
+ F M +G+ P +H+ +VDLL R GR +A + + +M PD + + L+AC+
Sbjct: 565 WRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACR 624
Query: 297 IHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGC 356
IHGKL+LGE A+R+ + + + Y+ +SN YA+ G W++ +R KM+E G++K PG
Sbjct: 625 IHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGL 684
Query: 357 SSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWA 416
S IEV+ ++HEF G HP+ ++I +++ L +++ GY P T+ VLHD+ + EKE
Sbjct: 685 SFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETM 744
Query: 417 LAIHSERLAICYGLISTKPY-TTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
L HSE++AI +GL+S++ IRVVKNLRVC+DCH+ K IA I R II+RD NRFH
Sbjct: 745 LLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDIILRDCNRFH 804
Query: 476 HF-ENGTCSCGDYW 488
F +G CSCGDYW
Sbjct: 805 RFSSDGKCSCGDYW 818
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 188/424 (44%), Gaps = 75/424 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKD------------------------ 36
+GREIH +V GL S +S LV +Y + G D
Sbjct: 125 QGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHS 184
Query: 37 -------AMQLFDEM--------------------PEC-----------------NDVVA 52
A+++F EM PE +D+V
Sbjct: 185 QSGDWSGALRIFKEMKCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVV 244
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
+T +IN Y + G A EVF ++K +D V W MI V+NG+ AL+L++++ +
Sbjct: 245 ATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGF 304
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
+ + T V +L ACS + AL GR +HS++ + +D V AL+NMY++CG +++A +
Sbjct: 305 KRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARK 364
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
VF MK RD +++LI A +G +A + + G R T + + ++ G
Sbjct: 365 VFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDT-ICWNAMITTYVQNGC 423
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDF---ITNMKIAPDHIMLG 289
+IF+ MT G++P + +++ + +GR E I+ ++ + ++
Sbjct: 424 AVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTN 483
Query: 290 SLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
+L++ G L+ E++ + ++ + A++ G++ EA+ + +M G
Sbjct: 484 TLINMYARCGSLEEAERL---FAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEG 540
Query: 350 VQKE 353
V+ +
Sbjct: 541 VKPD 544
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 181/428 (42%), Gaps = 69/428 (16%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMP-ECNDVVASTVMINC 59
EGR +H ++ + L+ +YGKC DA +F+ M +VV+ MI
Sbjct: 25 EGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAA 84
Query: 60 YVEHGLVENAFEVFSRVKVK----DTVCW------------------------------- 84
Y ++G A ++ R+ ++ D V +
Sbjct: 85 YAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQGREIHNRVFYSGLDSFQSL 144
Query: 85 -TAMIDGLVRNGEMARALDLFREMQ-RD-----------------------------NVR 113
A++ R G + A +F+ +Q RD +++
Sbjct: 145 ANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCDMK 204
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
PN T + V+S S L GR IH+ + + D + +V ALINMY +CG +A +V
Sbjct: 205 PNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREV 264
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV 233
F++MK+RD+ ++N +I +G EA+E+++++ +G + TK TFV +L ACS +
Sbjct: 265 FDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKAL 324
Query: 234 DLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLS 293
G + S + G++ ++ +V++ ++ G EEA MK D + +L+
Sbjct: 325 AQG-RLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMK-NRDAVAWSTLIG 382
Query: 294 ACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
A +G + + K S D+ + + Y +G A++I +M A K
Sbjct: 383 AYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKP 442
Query: 354 PGCSSIEV 361
+ I V
Sbjct: 443 DAVTFIAV 450
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 123/260 (47%), Gaps = 23/260 (8%)
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
+P+ VT + VL +CS G + GR +H + R + + +VG ALI+MY +C + A
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 173 VFEEM--KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-- 228
VFE M ++R+V ++N++IA A +G S EA+ ++ M QG+ VTFV VL ACS
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123
Query: 229 ------HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIA 282
H + G + FQS+ +V + +R G +A +++
Sbjct: 124 AQGREIHNRVFYSGLDSFQSLAN------------ALVTMYARFGSVGDAKRMFQSLQT- 170
Query: 283 PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIR 342
D +++ A G +I K + +S TY+ + + +++ E +I
Sbjct: 171 RDETSWNAVILAHSQSGDWSGALRIFKEMKCDMKPNSTTYINVISGFSTPEVLPEGRKIH 230
Query: 343 AKMKEAGVQKEPGCSSIEVN 362
A++ G + ++ +N
Sbjct: 231 AEIVANGFDSDLVVATALIN 250
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/480 (42%), Positives = 301/480 (62%), Gaps = 4/480 (0%)
Query: 13 GLRSNRSTRLKLVELYGKCGEFKDAMQLF----DEMPECNDVVASTVMINCYVEHGLVEN 68
G+R + T ++++ + + + ++ E V +T ++ YV+ G +E
Sbjct: 36 GMRPDSFTAVRVLTACARVADLETGEAVWAAARQEEGVAESVFVATAALDLYVKCGEMEK 95
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A VF +K +D V W AM+ G NG ALDLF MQ + +P+ T+V LSAC++
Sbjct: 96 ARSVFDEMKNRDAVAWGAMVGGYASNGHPREALDLFFAMQMEGAKPDCYTVVGALSACTR 155
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
LGAL+LGR + + N ++G ALI+MY++CG +A VF++M ERD+ +N++
Sbjct: 156 LGALDLGRQAVGMVHWDEVLGNPVLGTALIDMYAKCGSTSEAWMVFQQMLERDIIVWNAM 215
Query: 189 IAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYG 248
I GL M G A + +M G++ TF+G+L +C+H GLV+ G + F +MT Y
Sbjct: 216 ILGLGMTGHEKIAFALVGQMKKSGVKLNDNTFIGLLCSCTHTGLVNDGRQYFHNMTHVYR 275
Query: 249 IEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIA 308
I P+IEHYGC+VDL SR G EEA+ I +M + + ++ G+LL CKIH L E
Sbjct: 276 ISPRIEHYGCMVDLFSRAGLLEEAHQLIGDMPMLANAVVWGALLGGCKIHRNADLAEHAL 335
Query: 309 KRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEF 368
K+L+ +SG YV+LSN Y++SG+W++A ++R +MK G++K P S +E++ ++H+F
Sbjct: 336 KQLIRLEPWNSGNYVMLSNIYSNSGRWEDAAKLRLEMKAKGIEKVPASSWVELDGKVHKF 395
Query: 369 ILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICY 428
+GD HP ++IY K+ EL +K GY P+TEVV+ D+E+ EKE L HSE++AI +
Sbjct: 396 YVGDDSHPLSDKIYAKLDELGMEMKAMGYEPTTEVVMFDVENEEKENTLVHHSEKIAIAF 455
Query: 429 GLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
LI+T+P TIRV KNLRVC DCHS IKLI+ IT R+I+VRD NRFH F +G CSC DYW
Sbjct: 456 SLITTEPGETIRVTKNLRVCTDCHSAIKLISRITCREIVVRDNNRFHCFRDGHCSCNDYW 515
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 105/200 (52%), Gaps = 2/200 (1%)
Query: 81 TVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHS 140
TV WTA+I + G A+ + R +RP+ T V VL+AC+++ LE G + +
Sbjct: 6 TVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETGEAVWA 65
Query: 141 YMGKHR-IDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSI 199
+ + + V A +++Y +CG+++KA VF+EMK RD + +++ G A +G
Sbjct: 66 AARQEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYASNGHPR 125
Query: 200 EAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI 259
EA+++F M +G +P T VG L+AC+ G +DLG + + D + + +
Sbjct: 126 EALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPVLGTA-L 184
Query: 260 VDLLSRVGRPEEAYDFITNM 279
+D+ ++ G EA+ M
Sbjct: 185 IDMYAKCGSTSEAWMVFQQM 204
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 76/206 (36%), Gaps = 35/206 (16%)
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
M ++ +LIA G ++EA+ + R G+RP T V VL AC+ ++ G
Sbjct: 1 MPHPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETG 60
Query: 237 FEIFQSMTRDYGIEPQI-------------------------------EHYGCIVDLLSR 265
++ + ++ G+ + +G +V +
Sbjct: 61 EAVWAAARQEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYAS 120
Query: 266 VGRPEEAYDFITNMKI---APDHIMLGSLLSACKIHGKLQLGEQIAKRL-LDCRSADSGT 321
G P EA D M++ PD + LSAC G L LG Q + D +
Sbjct: 121 NGHPREALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPVL 180
Query: 322 YVLLSNAYASSGKWKEAVQIRAKMKE 347
L + YA G EA + +M E
Sbjct: 181 GTALIDMYAKCGSTSEAWMVFQQMLE 206
>gi|242032459|ref|XP_002463624.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
gi|241917478|gb|EER90622.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
Length = 607
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/443 (46%), Positives = 297/443 (67%), Gaps = 2/443 (0%)
Query: 48 NDVVASTVMINCYVEHG--LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
D S +I+ Y G + +A VF R+ V W+AMI G VR G + A+ LFR
Sbjct: 165 TDQYVSNTLIHMYSCFGGEFLGDARNVFDRMDKSSVVTWSAMIGGYVRGGLSSDAVGLFR 224
Query: 106 EMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG 165
EMQ VRP+EVT++ VL+A + LGALEL RW+ ++ + I + + ALI+ ++CG
Sbjct: 225 EMQASGVRPDEVTVIGVLAAAADLGALELARWVGRFVEREGIGKSVTLCNALIDALAKCG 284
Query: 166 DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
D+D A+ VF+ M+ER V ++ S+I LAM GR EAV +F M G+RP V F+GVL
Sbjct: 285 DVDGAVAVFQGMEERTVVSWTSVIDALAMEGRGKEAVAVFEAMKTAGVRPDDVVFIGVLT 344
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDH 285
ACSH G+VD G+ F SM +YGI+P+IEHYGC+VD+ R G E A +FI M + P+
Sbjct: 345 ACSHAGMVDEGYGYFDSMKMEYGIDPKIEHYGCMVDMFGRAGMVERAMEFIHTMPMKPNP 404
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
I+ +L++AC+ HG+L+LGE I + LL+ A YV+LSN YA + +WKE +IR +M
Sbjct: 405 IIWRTLVAACRAHGRLELGESITRNLLNEYPAHEANYVMLSNVYALTQRWKEKSEIRREM 464
Query: 346 KEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVL 405
+ G++K PGCS +E++ E+HEFI GD HPQ ++IY ++E+ + +K G+ +T VL
Sbjct: 465 SKRGIKKVPGCSLVELDGEVHEFIAGDESHPQWKEIYMMVEEMARELKHVGHISATSEVL 524
Query: 406 HDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRK 465
D+++ +KE AL HSE+LAI + L+ T P T +RVVKNLRVC+DCH+ IK I+ + R+
Sbjct: 525 LDLDEEDKEGALQWHSEKLAIAFVLLRTPPGTQVRVVKNLRVCSDCHAAIKCISLVYNRE 584
Query: 466 IIVRDRNRFHHFENGTCSCGDYW 488
IIVRDR+RFH F+NG+CSC D+W
Sbjct: 585 IIVRDRSRFHRFKNGSCSCNDFW 607
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 105/247 (42%), Gaps = 46/247 (18%)
Query: 99 RALDLFREMQRDNVRPNEVTIVCVLSACSQL-GALELGRWIHSYMGKHRIDLNHIVGGAL 157
RA F M R V PN+ T +L AC+ L G +G H+ K + V L
Sbjct: 114 RAAAFFPLMLRSAVLPNKFTFPFLLKACAALPGFPGVGLQAHAAALKFGFATDQYVSNTL 173
Query: 158 INMYSRCGD--IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRP 215
I+MYS G + A VF+ M + V T++++I G G S +AV +FREM G+RP
Sbjct: 174 IHMYSCFGGEFLGDARNVFDRMDKSSVVTWSAMIGGYVRGGLSSDAVGLFREMQASGVRP 233
Query: 216 TKVTFVGV-----------------------------------LNACSHGGLVDLGFEIF 240
+VT +GV ++A + G VD +F
Sbjct: 234 DEVTVIGVLAAAADLGALELARWVGRFVEREGIGKSVTLCNALIDALAKCGDVDGAVAVF 293
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIA---PDHIMLGSLLSACKI 297
Q M E + + ++D L+ GR +EA MK A PD ++ +L+AC
Sbjct: 294 QGME-----ERTVVSWTSVIDALAMEGRGKEAVAVFEAMKTAGVRPDDVVFIGVLTACSH 348
Query: 298 HGKLQLG 304
G + G
Sbjct: 349 AGMVDEG 355
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/491 (41%), Positives = 297/491 (60%), Gaps = 5/491 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++HG V+K G R + L+++YGKCG + +++F E DV + ++
Sbjct: 172 GKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHM-DVASCNALVAGLS 230
Query: 62 EHGLVENAFEVFSRVKVK----DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ V A +F + + V WT+++ V+NG A+DLFR MQ V PN V
Sbjct: 231 RNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSV 290
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
TI CVL A + + AL GR H + + + VG AL++MY++CG A +F+ M
Sbjct: 291 TIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAM 350
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
R+V ++N++I G AMHG + AV++F M +P VTF VL ACS GL + G
Sbjct: 351 PSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGR 410
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F M + +GI P++EHY C+V LL R G+ +EAYD I M PD + GSLL +C++
Sbjct: 411 RYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRV 470
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
+G + L E A++L ++G YVLLSN YAS W ++R +MK G++KE GCS
Sbjct: 471 YGNVLLAEVAAEKLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCS 530
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IE+ N++H + GD HP I +K+ +L + G++PS + VLHD+E+ EK+ L
Sbjct: 531 WIEIKNKVHMLLAGDNSHPMMTAITEKLNQLTIEMNRLGFAPSRDFVLHDVEEQEKDNIL 590
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
A+HSE+LA+ GLIST+P T +RV+KNLR+C DCH +K I++ +R+I VRD NRFHHF
Sbjct: 591 AVHSEKLAVALGLISTRPGTPLRVIKNLRICGDCHEAMKFISSFEQREISVRDTNRFHHF 650
Query: 478 ENGTCSCGDYW 488
++G CSCGDYW
Sbjct: 651 KDGKCSCGDYW 661
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 131/270 (48%), Gaps = 6/270 (2%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
R +H + GL + L+ Y + G A +FD MPE N VV + +I Y
Sbjct: 36 ARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVFDRMPEKN-VVGWSALIAGYS 94
Query: 62 EHGLVENAFEVFSRVKV----KDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
G E A+ + +++ + + W ++ GL R+G A+ M + P+
Sbjct: 95 ARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDAT 154
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+ C LSA + + +G+ +H Y+ K L+ V ALI+MY +CG D+ ++VF E
Sbjct: 155 GVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHES 214
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
DV + N+L+AGL+ + + EA+ +FRE I +G+ V++ ++ C G
Sbjct: 215 SHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAV 274
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
++F++M + G+EP C++ + V
Sbjct: 275 DLFRTM-QSIGVEPNSVTIPCVLPAFANVA 303
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 97 MARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGA 156
M+ + L+ ++ + P+ + L +C A L R +H+ + + V +
Sbjct: 1 MSHSNSLYHFLRHVSFPPDPHLLPSALKSCP---AQPLARALHAAAVVSGLAEDPFVASS 57
Query: 157 LINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPT 216
L++ Y R G A VF+ M E++V +++LIAG + G + A + +M + G+ P
Sbjct: 58 LLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPN 117
Query: 217 KVTFVGVLNACSHGG 231
+T+ G+++ + G
Sbjct: 118 VITWNGLVSGLNRSG 132
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/424 (47%), Positives = 287/424 (67%)
Query: 50 VVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
V +++ Y G E+A ++F + ++ V W ++I+G NG AL LFREM
Sbjct: 30 VFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGL 89
Query: 110 DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDK 169
V P+ T+V +LSAC++LGAL LGR H YM K +D N G AL+++Y++CG I +
Sbjct: 90 RGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQ 149
Query: 170 ALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH 229
A +VF+EM+E+ V ++ SLI GLA++G EA+E+F+E+ +G+ P+++TFVGVL ACSH
Sbjct: 150 AHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSH 209
Query: 230 GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLG 289
G+VD GF+ F+ M +YGI P+IEHYGC+VDLL R G ++A++FI NM + P+ ++
Sbjct: 210 CGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWR 269
Query: 290 SLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
+LL AC IHG L LGE +LL SG YVLLSN YAS +W + ++R M G
Sbjct: 270 TLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREG 329
Query: 350 VQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIE 409
V+K PG S +E+ N +HEF++GD HPQ E+IY K+ E+ +++KLEGY P VL DIE
Sbjct: 330 VKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHISNVLADIE 389
Query: 410 DWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVR 469
+ EKE AL+ HSE++AI + LI+T IRVVKNLRVC DCH IKLI+ + R+I+VR
Sbjct: 390 EEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAIKLISKVFDREIVVR 449
Query: 470 DRNR 473
DR+R
Sbjct: 450 DRSR 453
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 86/156 (55%), Gaps = 1/156 (0%)
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
A ++L + G +HS ++ + V L++MY+ CG + A ++FE M ER++ T
Sbjct: 4 AIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVT 63
Query: 185 YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT 244
+NS+I G A++GR EA+ +FREM +G+ P T V +L+AC+ G + LG M
Sbjct: 64 WNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMV 123
Query: 245 RDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
+ G++ + ++DL ++ G +A+ M+
Sbjct: 124 K-VGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEME 158
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 40/200 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR H ++K+GL N L++LY KCG + A ++FDEM E
Sbjct: 115 GRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEE--------------- 159
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K V WT++I GL NG AL+LF+E++R + P+E+T V
Sbjct: 160 -----------------KSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVG 202
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVG----GALINMYSRCGDIDKALQVFEEM 177
VL ACS G ++ G Y + + + + G ++++ R G + +A + + M
Sbjct: 203 VLYACSHCGMVDEG---FDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNM 259
Query: 178 K-ERDVTTYNSLIAGLAMHG 196
+ + + +L+ +HG
Sbjct: 260 PMQPNAVVWRTLLGACTIHG 279
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/490 (41%), Positives = 298/490 (60%), Gaps = 36/490 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H QV G + KLV LY C A LFD +P+ N +
Sbjct: 94 GKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFL---------- 143
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
W +I G NG A+ L+ +M + P+ T
Sbjct: 144 ----------------------WNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPF 181
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL AC+ L A+E GR IH ++ + + + VG ALI+MY++CG + A +VF+++ RD
Sbjct: 182 VLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRD 241
Query: 182 ---VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
V ++N++I G AMHG + EA+++F EM N+ +P +TFVGVL+ACSHGGL++ G+
Sbjct: 242 AVLVVSWNAMITGYAMHGHATEALDLFEEM-NRVAKPDHITFVGVLSACSHGGLLEEGWM 300
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
F++M RDY I+P ++HY C+VDLL GR +EAY+ I MK+ PD + G+LL++CKIH
Sbjct: 301 FFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIH 360
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
++LGE +RL++ D+G YV+LSN YA +GKW+ ++R M + ++K CS
Sbjct: 361 ANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSW 420
Query: 359 IEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALA 418
IEV N++H F+ GD HP ++IY +++ + ++K GYSPST V HD+ED EK +
Sbjct: 421 IEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVC 480
Query: 419 IHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFE 478
HSERLAI +GLIST P T + + KNLR+C DCH IK I+ IT+R+I VRD NR+HHF+
Sbjct: 481 SHSERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFK 540
Query: 479 NGTCSCGDYW 488
+G CSCGDYW
Sbjct: 541 DGVCSCGDYW 550
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 141/344 (40%), Gaps = 57/344 (16%)
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
+ P +L +C A++ G+ +H+ + + ++ L+N+Y C + A
Sbjct: 71 LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
+F+ + + ++ +N LI G A +G AV+++ +M + G+ P TF VL AC+
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALS 190
Query: 232 LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSR---VGRPEEAYDFI------------ 276
++ G EI + + + G E + ++D+ ++ VG E +D I
Sbjct: 191 AIEHGREIHEHVVQT-GWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWN 249
Query: 277 ---------------------TNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR 315
N PDHI +LSAC G L+ G + ++
Sbjct: 250 AMITGYAMHGHATEALDLFEEMNRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDY 309
Query: 316 SADSGT--YVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNN-EIHEFI-LG 371
D Y + + SG+ EA + +MK V + G +N+ +IH + LG
Sbjct: 310 KIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMK---VLPDSGVWGALLNSCKIHANVELG 366
Query: 372 DIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
+I L+++++LE V+L +I +W
Sbjct: 367 EI-------------ALERLIELEPDDAGNYVILSNIYAQAGKW 397
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/493 (41%), Positives = 311/493 (63%), Gaps = 7/493 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +IH + K G ++ L+ +Y ++A ++F +P D V+ T +I+ Y
Sbjct: 141 GMQIHAHLFKFGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPH-PDSVSWTSLISGYS 199
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP-NEVTIV 120
+ GL++ AF +F + K++ W AM+ V+ A LF M+ +N ++
Sbjct: 200 KWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDKFVAT 259
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE- 179
+LSAC+ LGAL+ G+WIH Y+ ++ I+L+ + A+++MY +CG ++KALQVF +
Sbjct: 260 TMLSACTGLGALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPLP 319
Query: 180 -RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
R ++++N +I GLAMHG A+++F+EM Q + P +TF+ +L AC+H GLV+ G
Sbjct: 320 CRWISSWNCMIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVEEGRN 379
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
F M R YGIEP++EH+GC+VDLL R G EA I M ++PD +LG+LL ACK H
Sbjct: 380 YFSYMIRVYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVSPDVTVLGTLLGACKKH 439
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
++LGE+I +R+++ +SG YVLL+N YA++GKW++A ++R M + GV+K PG S
Sbjct: 440 RNIELGEEIGRRVIELEPNNSGRYVLLANLYANAGKWEDAAKVRKLMDDRGVKKAPGFSM 499
Query: 359 IEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVL--HDIEDWEK-EW 415
IE+ +HEFI G+ HPQ ++++ K+ E+ + +K GY T VL HD ++ E E
Sbjct: 500 IELQGTVHEFIAGERNHPQAKELHAKVYEMLEHLKSVGYVADTNGVLHGHDFDEEEDGEN 559
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
L HSE+LAI +GL TKP T+R++KNLR+C DCH KLI+ + R+IIVRDR RFH
Sbjct: 560 PLYYHSEKLAIAFGLSRTKPGETLRILKNLRICEDCHHACKLISTVFDREIIVRDRTRFH 619
Query: 476 HFENGTCSCGDYW 488
F+ G CSC DYW
Sbjct: 620 RFKMGQCSCQDYW 632
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 33/205 (16%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ IH + + G+ + +V++Y KCG + A+Q+F +P ++S
Sbjct: 273 QGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPLPCRWISS------- 325
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
W MI GL +G A+ LF+EM+R V P+++T +
Sbjct: 326 -----------------------WNCMIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFL 362
Query: 121 CVLSACSQLGALELGRWIHSYMGK-HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
+L+AC+ G +E GR SYM + + I+ G ++++ R G + +A ++ +EM
Sbjct: 363 NLLTACAHSGLVEEGRNYFSYMIRVYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPV 422
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVE 203
DVT +L+ H R+IE E
Sbjct: 423 SPDVTVLGTLLGACKKH-RNIELGE 446
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 156/377 (41%), Gaps = 79/377 (20%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCG---EFKDAMQLFDEMPECNDVVASTVMINC 59
R+ H Q+++LGL S+ L+ + A++LFD +P+ + + +T++
Sbjct: 39 RQYHSQIIRLGLSSHNHLIPPLINFCARASTSDALTYALKLFDSIPQPDAFLYNTIIKGF 98
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
L N+ L L+ M +++V PN T
Sbjct: 99 LHSQLLPTNSI------------------------------LLLYSHMLQNSVLPNNFTF 128
Query: 120 VCVLSACSQLGALELGRWIHSYM-----GKHRIDLNHIVG-------------------- 154
+L AC + ++ G IH+++ G H + LN ++
Sbjct: 129 PSLLIACRK---IQHGMQIHAHLFKFGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPH 185
Query: 155 ------GALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM 208
+LI+ YS+ G ID+A +F+ M +++ ++N+++A R EA +F M
Sbjct: 186 PDSVSWTSLISGYSKWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRM 245
Query: 209 INQGIRP-TKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
+ K +L+AC+ G +D G I + + R+ GIE + IVD+ + G
Sbjct: 246 KAENNNVLDKFVATTMLSACTGLGALDQGKWIHEYIKRN-GIELDSKLTTAIVDMYCKCG 304
Query: 268 RPEEAYDFITNMK-----IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSA-DSGT 321
E+A ++ I+ + M+G L +HG + Q+ K + R A D T
Sbjct: 305 CLEKALQVFHSLPLPCRWISSWNCMIGGL----AMHGNGEAAIQLFKEMERQRVAPDDIT 360
Query: 322 YVLLSNAYASSGKWKEA 338
++ L A A SG +E
Sbjct: 361 FLNLLTACAHSGLVEEG 377
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/491 (40%), Positives = 301/491 (61%), Gaps = 5/491 (1%)
Query: 2 GREIHGQVLKLGLRSNR----STRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMI 57
GR++HG +L+ + + S L+ Y K +A ++FD+MP D+++ ++
Sbjct: 306 GRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMP-VRDIISWNAVL 364
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ YV +E A +FS + ++ + WT MI GL +NG L LF +M+ + + P +
Sbjct: 365 SGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDY 424
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
++ACS LG+L+ G+ IHS + + D G ALI MYSRCG ++ A VF M
Sbjct: 425 AFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTM 484
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
D ++N++IA LA HG ++A+E+F +M+ + I P ++TF+ +L AC+H GL+ G
Sbjct: 485 PYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGR 544
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F +M YGI P +HY ++DLL R G +A I +M + +LL+ C+I
Sbjct: 545 HYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRI 604
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
HG ++LG Q A RLL+ GTY++LSN YA+ G+W E ++R M+E GV+KEPGCS
Sbjct: 605 HGNMELGIQAADRLLELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCS 664
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
+EV N +H F++ D RHP+ + +Y +Q+L +K GY P T+ VLHD+E KE +L
Sbjct: 665 WVEVENMVHVFLVDDARHPEVQAVYTYLQQLVNEMKKLGYVPDTKFVLHDMESEHKEHSL 724
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
+ HSE+LA+ YG++ TIRV KNLR+C DCH+ K I+ + +R+I+VRDR RFHHF
Sbjct: 725 STHSEKLAVVYGIMKLPLGATIRVFKNLRICGDCHNAFKYISKVVEREIVVRDRKRFHHF 784
Query: 478 ENGTCSCGDYW 488
+NG CSCG+YW
Sbjct: 785 KNGECSCGNYW 795
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 154/358 (43%), Gaps = 55/358 (15%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGE---------FKDAMQLFDEMPECNDVVAS-T 54
+H +V+KLG S L+ Y C A ++FDE P+ S T
Sbjct: 162 LHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWT 221
Query: 55 VMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP 114
MI YV + + A E+ + V W AMI G VR G A D FR M ++
Sbjct: 222 TMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQE 281
Query: 115 NEVTIVCVLSACS----QLGALELGRWIHSYMGKHRIDLNH----IVGGALINMYSR--- 163
+E T ++SAC ++G GR +H Y+ + ++ +H V ALI Y++
Sbjct: 282 DEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDR 341
Query: 164 ----------------------------CGDIDKALQVFEEMKERDVTTYNSLIAGLAMH 195
I++A +F EM ER+V T+ +I+GLA +
Sbjct: 342 MIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQN 401
Query: 196 GRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEH 255
G E +++F +M ++G+ P F G + ACS G +D G +I + R G + +
Sbjct: 402 GFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIR-LGHDSGLSA 460
Query: 256 YGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG----KLQLGEQIAK 309
++ + SR G E A M D + ++++A HG ++L EQ+ K
Sbjct: 461 GNALITMYSRCGVVESAESVFLTMPYV-DSVSWNAMIAALAQHGHGVKAIELFEQMMK 517
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 172/404 (42%), Gaps = 61/404 (15%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
R +H +L G + N +L+ +Y K A +LFD++P+ D+VA T +++ Y
Sbjct: 24 ARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPK-PDIVARTTLLSAYS 82
Query: 62 EHGLVENAFEVF--SRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
G V+ A ++F + + ++DTV + AMI + AL+LF +M+R P+ T
Sbjct: 83 SSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTF 142
Query: 120 VCVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGD---------IDK 169
VLSA S + E + +H + K L V AL++ Y C +
Sbjct: 143 SSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMAS 202
Query: 170 ALQVFEEMKERDV---------------------------------TTYNSLIAGLAMHG 196
A +VF+E + + +N++I+G G
Sbjct: 203 ARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRG 262
Query: 197 RSIEAVEMFREMINQGIRPTKVTFVGVLNACSH----GGLVDLGFEIFQSMTRDYGIEPQ 252
EA + FR M + GI+ + T+ +++AC G+ + G ++ + R +EP
Sbjct: 263 LYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTV-VEPS 321
Query: 253 IEHY-----GCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQI 307
H+ ++ ++ R EA M + D I ++LS +++ I
Sbjct: 322 -HHFVLSVNNALITFYTKYDRMIEARRVFDKMPVR-DIISWNAVLSGYVNAQRIEEANSI 379
Query: 308 AKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
+ + + T+ ++ + A +G +E +++ +MK G++
Sbjct: 380 FSEMPE---RNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLE 420
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
Query: 134 LGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLA 193
+ R +H+++ N + LIN+Y + +I A ++F+++ + D+ +L++ +
Sbjct: 23 IARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYS 82
Query: 194 MHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQI 253
G A ++F IR T V++ ++ A SHG +F M R YG P
Sbjct: 83 SSGNVKLAQQLFNA-TPLTIRDT-VSYNAMITAYSHGNDGHAALNLFVQMKR-YGFLPDP 139
Query: 254 EHYGCIVDLLSRVGRPE 270
+ ++ LS + E
Sbjct: 140 FTFSSVLSALSLIADEE 156
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/465 (43%), Positives = 284/465 (61%), Gaps = 1/465 (0%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
++ Y + G+ A QLF+ P VVA T MI +++ G +E A + F + +K+ V
Sbjct: 136 MISGYVESGDLDLAKQLFEVAP-VRSVVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVT 194
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W AMI G + N + L LF+ M RPN ++ VL CS L AL+LG+ +H +
Sbjct: 195 WNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLIC 254
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
K + N G +L++MY +CGD++ A ++F M ++DV T+N++I+G A HG +A+
Sbjct: 255 KSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALY 314
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
+F +M ++G++P +TFV VL+AC+H G VDLG E F SM RDYG+E + +HY C+VDLL
Sbjct: 315 LFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLL 374
Query: 264 SRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV 323
R G+ EA D I M P + G+LL AC+IH L+L E AK LL+ + YV
Sbjct: 375 GRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHKNLELAEFAAKNLLNLDPESAAGYV 434
Query: 324 LLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYK 383
L+N YA+ +W +R MK+ V K PG S IEV + +HEF GD HP+ I++
Sbjct: 435 QLANVYAAMNRWDHVAMVRRSMKDNKVIKTPGYSWIEVKSVVHEFRSGDRIHPELAFIHE 494
Query: 384 KMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVK 443
K+ EL++ ++L GY P E LHD+ + +K+ L HSE+LAI YGLI T IRV K
Sbjct: 495 KLNELERKMRLAGYVPDLEYALHDVGEEQKKQILLRHSEKLAIAYGLIRMPLGTPIRVFK 554
Query: 444 NLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
NLRVC DCHS K I+ I R IIVRD RFHHF G CSCGDYW
Sbjct: 555 NLRVCGDCHSATKYISAIEGRVIIVRDTTRFHHFRQGECSCGDYW 599
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 99/205 (48%), Gaps = 35/205 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H + K + N + L+ +Y KCG+ +DA +LF MP+ DVV MI+ Y
Sbjct: 246 GKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQ-KDVVTWNAMISGYA 304
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+HG E +AL LF +M+ + ++P+ +T V
Sbjct: 305 QHGAGE-------------------------------KALYLFDKMRDEGMKPDWITFVA 333
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSAC+ G ++LG + +S + + ++ ++++ R G + +A+ + ++M +
Sbjct: 334 VLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFK 393
Query: 181 DVTT-YNSLIAGLAMHGRSIEAVEM 204
+ + +L+ +H +++E E
Sbjct: 394 PHSAIFGTLLGACRIH-KNLELAEF 417
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/475 (41%), Positives = 299/475 (62%), Gaps = 7/475 (1%)
Query: 20 TRLKLVELYGKCGEFKD------AMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVF 73
T + ++E C + D + D++ +D+ +I+ Y + V+ A ++F
Sbjct: 348 TGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIF 407
Query: 74 SRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALE 133
+ + + V W AMI G +NG ++ AL+ F EM+ ++P+ T+V V+ A ++L
Sbjct: 408 NNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTR 467
Query: 134 LGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLA 193
+WIH + + +D N V AL++MYS+CG I A ++F+ + +R V T+N++I G
Sbjct: 468 HAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYG 527
Query: 194 MHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQI 253
HG A+++F +M + P +T++ V++ACSH GLVD G F+SM +DYG+EP +
Sbjct: 528 THGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSM 587
Query: 254 EHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
+HYG +VDLL R GR +EA+DFI NM I+P + G+ ACKIH +++GE+ AK+L +
Sbjct: 588 DHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFE 647
Query: 314 CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDI 373
+ G +VLL+N YAS+ KW + ++R M++ G++K PGCS +E+ NE+H F G
Sbjct: 648 LNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGST 707
Query: 374 RHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLIST 433
HPQ ++IY ++EL +K GY P T ++L D+ED +E L HSE+LAI +GL++T
Sbjct: 708 THPQSKRIYAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNT 766
Query: 434 KPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
P TTI V KNLRVC DCH+ K I+ +T R+IIVRD RFHHF+NG CSCGDYW
Sbjct: 767 SPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 135/278 (48%), Gaps = 33/278 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIHGQ++ +N +V +Y KC +
Sbjct: 166 GKEIHGQLITNSFAANVFAMTGVVNMYAKCRQ---------------------------- 197
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+++A+++F R+ +D V W +I G +NG +AL+L MQ + RP+ +T+V
Sbjct: 198 ----IDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVT 253
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL A + +G L +G+ IH Y + + AL +MYS+CG ++ A +F+ M ++
Sbjct: 254 VLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKT 313
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++NS++ G +G +A+ +F +M+ +GI PT VT + L+AC+ G ++ G +
Sbjct: 314 VVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERG-KFVH 372
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM 279
+ I ++ + S+ R + A D N+
Sbjct: 373 KFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNL 410
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 154/302 (50%), Gaps = 15/302 (4%)
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
ST + + Y + G VE A +F + K V W +M+DG V+NGE +A+ +F +M + +
Sbjct: 286 STALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGI 345
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
P VTI+ L AC+ LG LE G+++H ++ + + + V +LI+MYS+C +D A
Sbjct: 346 DPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASD 405
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
+F + R ++N++I G A +GR EA+ F EM + G++P T V V+ A + +
Sbjct: 406 IFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSV 465
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLG 289
I + R ++ I +VD+ S+ G A +D I++ + I
Sbjct: 466 TRHAKWIHGLIIRS-CLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHV----ITWN 520
Query: 290 SLLSACKIHG----KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
+++ HG L L +++ K ++ + TY+ + +A + SG E ++ M
Sbjct: 521 AMIDGYGTHGLGRAALDLFDKMKKGAVE---PNDITYLSVISACSHSGLVDEGLRHFKSM 577
Query: 346 KE 347
K+
Sbjct: 578 KQ 579
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 120/249 (48%), Gaps = 1/249 (0%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
L+EL E + L + N+ + T +++ + ++G + A VF + K
Sbjct: 55 LLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDAL 114
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
+ M+ G +N + AL M+ D+V+P +L C L+ G+ IH +
Sbjct: 115 YHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLI 174
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
+ N ++NMY++C ID A ++F+ M ERD+ ++N++IAG + +G + +A+E
Sbjct: 175 TNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALE 234
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
+ M ++G RP +T V VL A + GL+ +G I R G + + D+
Sbjct: 235 LVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRA-GFAKLVNISTALADMY 293
Query: 264 SRVGRPEEA 272
S+ G E A
Sbjct: 294 SKCGSVETA 302
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 35/201 (17%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
IHG +++ L N LV++Y KCG A +LFD + + V+ MI+ Y HG
Sbjct: 472 IHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISD-RHVITWNAMIDGYGTHG 530
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
L ALDLF +M++ V PN++T + V+S
Sbjct: 531 LGR-------------------------------AALDLFDKMKKGAVEPNDITYLSVIS 559
Query: 125 ACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-ERDV 182
ACS G ++ G R S + ++ + GA++++ R G I +A E M +
Sbjct: 560 ACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGI 619
Query: 183 TTYNSLIAGLAMHGRSIEAVE 203
T Y + +H ++IE E
Sbjct: 620 TVYGAXXGACKIH-KNIEVGE 639
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/491 (41%), Positives = 301/491 (61%), Gaps = 8/491 (1%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGE--FKDAMQLFDEMPECN-DVVASTVMINCY 60
E+ ++ G R N ST + ++ +Y G + F + D + ST + Y
Sbjct: 299 ELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLY 358
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+E+A +F + K W AMI G +NG A+ LF+ MQ NV+PN +TI
Sbjct: 359 CRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITIS 418
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
LSAC+ LGAL LG+W+H + K +++LN V ALI+MY++CG I +A +F+ M +
Sbjct: 419 STLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNK 478
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+V ++N++I+G +HG+ EA++++++M++ I PT TF+ V+ ACSHGGLVD G ++F
Sbjct: 479 NVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVF 538
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKI 297
+ MT +Y I P IEH C+VDLL R G+ EA + I+ I P + G+LL AC +
Sbjct: 539 RVMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPG--VWGALLGACMV 596
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
H L + +++L + S ++G YVLLSN Y S + EA +R + K + K PGC+
Sbjct: 597 HKNSDLAKLASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCT 656
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IE+ + H F+ GD HPQ E IY ++ L + GY P TE L+D+E+ EKE +
Sbjct: 657 LIEIGDRPHVFMAGDHLHPQSEAIYSYLERLTAKMIEAGYQPVTEAALYDVEEEEKEHMV 716
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
+HSE+LAI +GL+ST+P T IR++KNLRVC DCH+ K I+ +T+R I+VRD +RFHHF
Sbjct: 717 KVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHF 776
Query: 478 ENGTCSCGDYW 488
+G CSCGDYW
Sbjct: 777 RDGVCSCGDYW 787
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 161/334 (48%), Gaps = 41/334 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +HG +K GL + L+ LY KCG+ A LFD
Sbjct: 231 GRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFD------------------- 271
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
R+ D V + A+I G NG + +++LF+E+ RPN T+V
Sbjct: 272 -------------RMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVA 318
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V+ S G L R +H+++ K R+D + +V AL +Y R D++ A +F+ M E+
Sbjct: 319 VIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKT 378
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++N++I+G A +G + AV +F+ M ++P +T L+AC+H G + LG + +
Sbjct: 379 MESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHR 438
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIH 298
++++ +E + ++D+ ++ G EA +D + N + + +++S +H
Sbjct: 439 IISKE-KLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNV----VSWNAMISGYGLH 493
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASS 332
G+ ++ K +LD R + + LS YA S
Sbjct: 494 GQGAEALKLYKDMLDARILPTSS-TFLSVIYACS 526
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 156/343 (45%), Gaps = 51/343 (14%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLF-REM 107
D ++ + Y + ++A +VF V DT+ W ++ GL + AL+ F R +
Sbjct: 148 DTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGL----PGSEALEAFVRMV 203
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSY-----MGKHRIDLNHIVGGALINMYS 162
VRP+ T+ L A ++ + +GR +H Y + +H H+V G L+++YS
Sbjct: 204 DAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEH----EHVVTG-LMSLYS 258
Query: 163 RCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVG 222
+CGD+D A +F+ M D+ YN+LI+G +++G +VE+F+E+ G RP T V
Sbjct: 259 KCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVA 318
Query: 223 V-----------LNACSHGGLV----DLGFEIFQSMTR---------------DYGIEPQ 252
V L C H +V D + ++T D +E
Sbjct: 319 VIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKT 378
Query: 253 IEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAK 309
+E + ++ ++ G E A + + + + P+ I + S LSAC G L LG+ +
Sbjct: 379 MESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWV-H 437
Query: 310 RLLDCRSADSGTYVL--LSNAYASSGKWKEAVQIRAKMKEAGV 350
R++ + YV+ L + YA G EA I +M V
Sbjct: 438 RIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNV 480
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/491 (39%), Positives = 302/491 (61%), Gaps = 5/491 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLK----LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMI 57
G+++H +L+ R + L L LY KCG+ +A Q+F++MP D+V+ ++
Sbjct: 310 GKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMP-VKDLVSWNAIL 368
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ YV G ++ A F + ++ + WT MI GL +NG +L LF M+ + P +
Sbjct: 369 SGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDY 428
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+ AC+ L AL GR +H+ + + D + G ALI MY++CG ++ A +F M
Sbjct: 429 AFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTM 488
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
D ++N++IA L HG +A+E+F M+ + I P ++TF+ VL+ CSH GLV+ G
Sbjct: 489 PYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGH 548
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F+SM+ YGI P +HY ++DLL R G+ EA D I M + P + +LL+ C+I
Sbjct: 549 RYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRI 608
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
HG + LG Q A+RL + GTYVLLSN YA+ G+W + ++R M++ GV+KEPGCS
Sbjct: 609 HGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCS 668
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IEV N++H F++ DI HP+ + +Y ++EL ++ GY P T+ VLHD+E +KE+ L
Sbjct: 669 WIEVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYVL 728
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
+ HSE+LA+ +GL+ T+RV KNLR+C DCH+ K ++ + +R+I+VRD RFHHF
Sbjct: 729 STHSEKLAVGFGLLKLPLGATVRVFKNLRICGDCHNAFKFMSKVVEREIVVRDGKRFHHF 788
Query: 478 ENGTCSCGDYW 488
+NG CSCG+YW
Sbjct: 789 KNGECSCGNYW 799
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 184/432 (42%), Gaps = 85/432 (19%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGE---------FKDAMQLFDEMPECNDVVAS 53
++IH V+K G S L+ ++ KC A +LFDEM E D ++
Sbjct: 170 QQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTE-RDELSW 228
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
T MI YV +G ++ A + + K V W AMI G V +G AL++FR+M ++
Sbjct: 229 TTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQ 288
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYM----GKHRIDLNHIVGGALINMYSRCGDIDK 169
+E T VLSAC+ G G+ +H+Y+ + +D + V AL +Y +CG +D+
Sbjct: 289 WDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDE 348
Query: 170 ALQV-------------------------------FEEMKERDVTTYNSLIAGLAMHGRS 198
A QV FEEM ER++ T+ +I+GLA +G
Sbjct: 349 ARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFG 408
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HGGLVDLGFE-------IF 240
E++++F M ++G P F G + AC+ H LV LGF+
Sbjct: 409 EESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNAL 468
Query: 241 QSMTRDYGI----------EPQIE--HYGCIVDLLSRVGRPEEA---YDFITNMKIAPDH 285
+M G+ P ++ + ++ L + G +A ++ + I PD
Sbjct: 469 ITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDR 528
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT--YVLLSNAYASSGKWKEAVQIRA 343
I ++LS C G ++ G + K + G Y + + +GK+ EA +
Sbjct: 529 ITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIE 588
Query: 344 KMKEAGVQKEPG 355
M EPG
Sbjct: 589 TMP-----VEPG 595
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 180/400 (45%), Gaps = 59/400 (14%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
R +H ++ G + +L+++Y K + A LFDE+ + D+VA T +I +
Sbjct: 34 ARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQ-PDIVARTTLIAAHS 92
Query: 62 EHGLVENAFEVF--SRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
G A E+F + + ++DTVC+ AMI G N + A++LFR++ R+ RP+ T
Sbjct: 93 SAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTF 152
Query: 120 VCVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRC-------------- 164
VL A + + E + IH + K V AL++++ +C
Sbjct: 153 TSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAA 212
Query: 165 --------------------------GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRS 198
G++D A Q + M E+ V +N++I+G HG
Sbjct: 213 ARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFF 272
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRD---YGIEPQIEH 255
+EA+EMFR+M GI+ + T+ VL+AC++ G G ++ + R ++ +
Sbjct: 273 LEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSV 332
Query: 256 YGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLS----ACKIHGKLQLGEQIAKRL 311
+ L + G+ +EA M + D + ++LS A +I E++ +R
Sbjct: 333 NNALATLYWKCGKVDEARQVFNQMPV-KDLVSWNAILSGYVNAGRIDEAKSFFEEMPERN 391
Query: 312 LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
L T+ ++ + A +G +E++++ +MK G +
Sbjct: 392 LL-------TWTVMISGLAQNGFGEESLKLFNRMKSEGFE 424
>gi|297819366|ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323404|gb|EFH53825.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 591
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/492 (40%), Positives = 307/492 (62%), Gaps = 37/492 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +IHG++ G S+ L++LY C DA ++FDE+P+ D V+ V+I+CY
Sbjct: 132 GLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPQ-RDTVSWNVLISCY- 189
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD---NVRPNEVT 118
+RN L LF +M+ D V+P+ VT
Sbjct: 190 ------------------------------LRNKRTRDVLVLFDKMKNDVDRCVKPDNVT 219
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
+ L AC+ LGAL+ G+ +H ++ ++ + + L++MYSRCG +DKA +VF M+
Sbjct: 220 CLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYEVFNRMR 279
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
ER+V ++ ++I+GLAM+G EA+E F EM+ GI P + T G+L+ACSH GLVD G
Sbjct: 280 ERNVVSWTAMISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVDEGMM 339
Query: 239 IFQSM-TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F M + ++ I+P + HYGCIVDLL R ++AY I +M++ PD + +LL AC++
Sbjct: 340 FFDRMRSGEFKIKPNLHHYGCIVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRV 399
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
HG ++LGE++ L++ ++ ++G YVLL N Y+S GKW++ ++R+ MK+ +Q PGCS
Sbjct: 400 HGNVELGERVIAHLIEFKAEEAGDYVLLLNTYSSVGKWEKVTELRSLMKKKRIQTNPGCS 459
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIE-DWEKEWA 416
+IE+ +HEFI+ D+ HP++E+IYK + E+ Q +K+ GY LH+++ + EK +A
Sbjct: 460 AIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSELHNLDSEEEKGYA 519
Query: 417 LAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHH 476
L HSE+LAI +G++ T P TTIRV KNLR C DCH+ K ++++ R +IVRDR+RFHH
Sbjct: 520 LRYHSEKLAIAFGILVTPPETTIRVTKNLRTCVDCHNFAKFVSDVYDRVVIVRDRSRFHH 579
Query: 477 FENGTCSCGDYW 488
F+ G+CSC D+W
Sbjct: 580 FKGGSCSCNDFW 591
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 93/182 (51%), Gaps = 5/182 (2%)
Query: 103 LFREMQRDNVRP-NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMY 161
LFR ++R+ P N ++ L C + G L G IH + + ++ L+++Y
Sbjct: 99 LFRALRRNISFPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLY 158
Query: 162 SRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM---INQGIRPTKV 218
S C + A +VF+E+ +RD ++N LI+ + R+ + + +F +M +++ ++P V
Sbjct: 159 STCENSTDACKVFDEIPQRDTVSWNVLISCYLRNKRTRDVLVLFDKMKNDVDRCVKPDNV 218
Query: 219 TFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITN 278
T + L AC++ G +D G ++ + G+ + +V + SR G ++AY+
Sbjct: 219 TCLLALQACANLGALDFGKQV-HDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYEVFNR 277
Query: 279 MK 280
M+
Sbjct: 278 MR 279
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/485 (41%), Positives = 296/485 (61%), Gaps = 33/485 (6%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
+HG VLK G +N + L+ + + + A + FD MPE
Sbjct: 335 LHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPE------------------ 376
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
K W AMI G +NG A+ LF +M + NVRPN +TI LS
Sbjct: 377 --------------KTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLS 422
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
AC+QLGAL LG+W+H + + ++ N V ALI+MY++CG I +A ++F M ++V +
Sbjct: 423 ACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVS 482
Query: 185 YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT 244
+N++IAG +HG+ EA++++++M++ + PT TF+ VL ACSHGGLV+ G+++F+SMT
Sbjct: 483 WNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMT 542
Query: 245 RDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM-KIAPDHIMLGSLLSACKIHGKLQL 303
DY I P IEH C+VDLL R G+ +EA++ I+ K A + G+LL AC +H L
Sbjct: 543 DDYAINPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDL 602
Query: 304 GEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNN 363
+ +++L + +SG YVLLSN + S ++ EA +R + K + K PG + IE+ N
Sbjct: 603 AKLASQKLFELDPENSGYYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGN 662
Query: 364 EIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSER 423
+ H F+ GD HPQ E IY +++L + GY P TE L+D+E+ EKE + +HSE+
Sbjct: 663 KPHVFMAGDRAHPQSEAIYSYLEKLTAKMIEAGYRPETEAALYDVEEEEKEHMVKVHSEK 722
Query: 424 LAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCS 483
LAI +GL+ST+P T IR++KNLRVC DCH+ K I+ +T+R I+VRD +RFHHF +G CS
Sbjct: 723 LAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCS 782
Query: 484 CGDYW 488
CGDYW
Sbjct: 783 CGDYW 787
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 160/338 (47%), Gaps = 41/338 (12%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D ++ + Y V++A +VF V DTV W ++ GL + A++ F M
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGL----SGSEAVESFARMV 203
Query: 109 RD-NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
D +VRP+ T+ VL A +++ + +GR +HS+ K + + V LI++YS+CGD+
Sbjct: 204 CDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDV 263
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVG----- 222
+ A +F+ M++ D+ YN+LI+G +++G +V +F E++ G+ P T V
Sbjct: 264 ESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVH 323
Query: 223 ------VLNACSHGGLVDLGFEI-----------------FQSMTRDYGIEPQ--IEHYG 257
+L C HG ++ GF +S + + P+ +E +
Sbjct: 324 SPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWN 383
Query: 258 CIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC 314
++ ++ G E A ++ + + + P+ I + S LSAC G L LG+ + R++
Sbjct: 384 AMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWL-HRIITE 442
Query: 315 RSADSGTYVL--LSNAYASSGKWKEAVQIRAKMKEAGV 350
+ YV+ L + YA G EA +I M V
Sbjct: 443 EDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNV 480
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/491 (41%), Positives = 308/491 (62%), Gaps = 6/491 (1%)
Query: 4 EIHG---QVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPE---CNDVVASTVMI 57
E HG ++L+ G+ +R+T ++ + G ++ + +DV +I
Sbjct: 314 EAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALI 373
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
N Y + G +++A +VF R+ +D V WT ++ ++ + F++M + V+ N++
Sbjct: 374 NMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKI 433
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T +CVL ACS AL+ G+ IH+ + K + + V AL++MY +CG ++ A++VFE M
Sbjct: 434 TYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGM 493
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
RDV T+N+LI GL +GR +EA++ + M ++G+RP TFV VL+AC LV+ G
Sbjct: 494 SMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGR 553
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F M++DYGI P +HY C+VD+L+R G EA D I + + P M G+LL+AC+I
Sbjct: 554 RQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRI 613
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
H +++GE+ A+ L ++G YV LS YA++G W++ ++R MKE GV+KEPG S
Sbjct: 614 HCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRS 673
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IE+ E+H F+ D HP+ ++IY +++ LK+ +K GY P T V+HD++D KE A+
Sbjct: 674 WIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQMKSLGYVPDTRFVMHDLDDEGKERAV 733
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LAI YGLIST P T IR+ KNLRVC DCH+ K I+ ITKR+II RD +RFHHF
Sbjct: 734 CHHSEKLAIAYGLISTPPGTPIRISKNLRVCTDCHTATKFISKITKREIIARDAHRFHHF 793
Query: 478 ENGTCSCGDYW 488
+NG CSCGDYW
Sbjct: 794 KNGECSCGDYW 804
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 174/383 (45%), Gaps = 66/383 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H +L+ G++ N L++LY CG +A QL
Sbjct: 47 GKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQL--------------------- 85
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
F+ FS K V W MI G G A +LF MQ++ + P++ T V
Sbjct: 86 --------FDKFSN---KSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVS 134
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+LSACS L GR IH + + + + VG ALI+MY++CG + A +VF+ M RD
Sbjct: 135 ILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRD 194
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF- 240
++ +L A G E+++ + M+ + +RP+++T++ VL+AC ++ G +I
Sbjct: 195 EVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHA 254
Query: 241 --------------QSMTRDY----GIEPQIEHYGCIV--DLLS---------RVGRPEE 271
++T+ Y + E + C+ D+++ G+ EE
Sbjct: 255 HIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEE 314
Query: 272 AYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQI-AKRLLDCRSADSGTYVLLSN 327
A+ M +APD ++LSAC G L G++I A+ D +D L N
Sbjct: 315 AHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALIN 374
Query: 328 AYASSGKWKEAVQIRAKMKEAGV 350
Y+ +G K+A Q+ +M + V
Sbjct: 375 MYSKAGSMKDARQVFDRMPKRDV 397
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 163/352 (46%), Gaps = 39/352 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GREIH +V++ GL ++ + L+ +Y KC
Sbjct: 148 GREIHVRVMEAGLANDTTVGNALISMYAKC------------------------------ 177
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G V +A VF + +D V WT + +G +L + M ++ VRP+ +T +
Sbjct: 178 --GSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMN 235
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLSAC L ALE G+ IH+++ + + V AL MY +CG A +VFE + RD
Sbjct: 236 VLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRD 295
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +N++I G G+ EA F M+ +G+ P + T+ VL+AC+ G + G EI
Sbjct: 296 VIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHA 355
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIH 298
+D G+ + ++++ S+ G ++A +D + + +LG ++
Sbjct: 356 RAAKD-GLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVV 414
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
+Q+ ++ + A+ TY+ + A ++ K +I A++ +AG+
Sbjct: 415 ESFTTFKQMLQQGV---KANKITYMCVLKACSNPVALKWGKEIHAEVVKAGL 463
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 127/284 (44%), Gaps = 37/284 (13%)
Query: 93 RNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHI 152
++G A A D+ + + R + + V +L +C + L +G+ +H ++ + + N
Sbjct: 6 KDGWYAPA-DVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVY 64
Query: 153 VGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG 212
+ L+ +Y+ CG +++A Q+F++ + V ++N +I+G A G + EA +F M +
Sbjct: 65 ITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQER 124
Query: 213 IRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
+ P K TFV +L+ACS +++ G EI + + G+ ++ + ++ G +A
Sbjct: 125 LEPDKFTFVSILSACSSPAVLNWGREIHVRVM-EAGLANDTTVGNALISMYAKCGSVRDA 183
Query: 273 ----------------------------------YDFITNMKIAPDHIMLGSLLSACKIH 298
Y + ++ P I ++LSAC
Sbjct: 184 RRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSL 243
Query: 299 GKLQLGEQIAKRLLDCR-SADSGTYVLLSNAYASSGKWKEAVQI 341
L+ G+QI +++ +D L+ Y G +K+A ++
Sbjct: 244 AALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREV 287
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 34/196 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIH +V+K GL ++ + L+ +Y KCG +DA+++F+ M
Sbjct: 451 GKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGM----------------- 493
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++D V W +I GL +NG AL + M+ + +RPN T V
Sbjct: 494 ---------------SMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVN 538
Query: 122 VLSACSQLGALELGRWIHSYMGK-HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VLSAC +E GR ++M K + I ++++ +R G + +A V + +
Sbjct: 539 VLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLK 598
Query: 180 RDVTTYNSLIAGLAMH 195
+ +L+A +H
Sbjct: 599 PSAAMWGALLAACRIH 614
>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
Length = 652
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/522 (39%), Positives = 312/522 (59%), Gaps = 39/522 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN------------- 48
RE Q+ + L S S L+ YG+ G+ K A ++FD MPE N
Sbjct: 135 ARETFDQMPERNLFSWTS----LLSAYGRSGDVKAAGRVFDSMPEWNLVAWTAMLTGYSL 190
Query: 49 -----------------DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGL 91
D++A T M++ Y +G + E+F R+ +D + W M+ L
Sbjct: 191 SGDVVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRMPERDLISWATMVAAL 250
Query: 92 VRNGEMARALDLFREMQR-----DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHR 146
V N + + +LF M R + PN VT + +L ACS LGAL GR IH+ + +
Sbjct: 251 VENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIHAAVAERG 310
Query: 147 IDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
D + +V AL+N Y RCG + A VF+ M+ RDV +++S+I+ A GR EA+E++
Sbjct: 311 FDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYH 370
Query: 207 EMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRV 266
M+++G P + F+ VL ACS+ G+V+ + F+S+ D +EP +EHY C+VD+L R
Sbjct: 371 RMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRA 430
Query: 267 GRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLS 326
G+ +A D + M P ++ ++LSACK++ ++ GE A+ + + +S Y+ L+
Sbjct: 431 GKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENSSPYITLA 490
Query: 327 NAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQ 386
N Y+++ + K+A +IR M+E G++K+PGCS IEV + +HEFI GD HPQR++IY ++Q
Sbjct: 491 NIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAGDKMHPQRDEIYAEIQ 550
Query: 387 ELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLR 446
L + +K GY T+VVL D+E+ EKE L HSE+LAI +GLIST P +R+VKNLR
Sbjct: 551 RLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLISTPPGAPLRIVKNLR 610
Query: 447 VCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
VC+DCH+ K+I+ +T R+I+VRD NRFHHF+NG CSC DYW
Sbjct: 611 VCSDCHAATKVISKVTGREILVRDTNRFHHFQNGMCSCNDYW 652
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 145/325 (44%), Gaps = 47/325 (14%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
L+ + G ++A LFD M E D++A T+M+ +E+A F ++ +D V
Sbjct: 60 LLSAFALSGHHEEAKTLFDTMQE-RDLIAWTIMLTVLATFSNIEDAKYHFDQMPERDLVA 118
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
WTAM+ G+M A + F +M N+ + +LSA + G ++ + M
Sbjct: 119 WTAMLAANAERGQMENARETFDQMPERNL----FSWTSLLSAYGRSGDVKAAGRVFDSMP 174
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHG-----RS 198
+ N + A++ YS GD+ +A + F+ M ERD+ + ++++ A +G R
Sbjct: 175 ----EWNLVAWTAMLTGYSLSGDVVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLRYTRE 230
Query: 199 I--------------------------EAVEMFREM-----INQGIRPTKVTFVGVLNAC 227
I E+ E+F M +++G+ P +VTF+ +L+AC
Sbjct: 231 IFQRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDAC 290
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
S G + G +I ++ + G + + +V+ R G +A M+ D I
Sbjct: 291 SFLGALAEGRKIHAAVA-ERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMR-RRDVIS 348
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLL 312
S++SA G++ ++ R+L
Sbjct: 349 WSSMISAFAQRGRVDEAMELYHRML 373
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 130/316 (41%), Gaps = 49/316 (15%)
Query: 27 LYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTA 86
++G+ G + A Q+FD + + D + +M++ Y G + NA VF R+ WTA
Sbjct: 1 MFGRLGCVERARQIFDAIAD-RDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTA 59
Query: 87 MIDGLVRNGEMARALDLFREMQ-RD---------------NVRPNE-----------VTI 119
++ +G A LF MQ RD N+ + V
Sbjct: 60 LLSAFALSGHHEEAKTLFDTMQERDLIAWTIMLTVLATFSNIEDAKYHFDQMPERDLVAW 119
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+L+A ++ G +E R M + N +L++ Y R GD+ A +VF+ M E
Sbjct: 120 TAMLAANAERGQMENARETFDQMPER----NLFSWTSLLSAYGRSGDVKAAGRVFDSMPE 175
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
++ + +++ G ++ G + A F M + + + + +L+A + G + EI
Sbjct: 176 WNLVAWTAMLTGYSLSGDVVRAKRAFDSMPERDL----IAWTAMLSAYAFNGHLRYTREI 231
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK--------IAPDHIMLGSL 291
FQ M E + + +V L EE+ + M + P+ + +L
Sbjct: 232 FQRMP-----ERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITL 286
Query: 292 LSACKIHGKLQLGEQI 307
L AC G L G +I
Sbjct: 287 LDACSFLGALAEGRKI 302
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 99/219 (45%), Gaps = 6/219 (2%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR+IH V + G ++ LV YG+CG DA +FD M DV++ + MI+ +
Sbjct: 298 EGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRR-RDVISWSSMISAF 356
Query: 61 VEHGLVENAFEVFSRV----KVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN-VRPN 115
+ G V+ A E++ R+ + D + + +++ +G + + D FR + D V P
Sbjct: 357 AQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPT 416
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
C++ + G L + M H L ++ + +Y+ + A +V
Sbjct: 417 LEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVF 476
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIR 214
E+ + + Y +L + R +A + + M +GI+
Sbjct: 477 ELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIK 515
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 113/251 (45%), Gaps = 24/251 (9%)
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
G VE A ++F + +D+ W M+ R+G+++ A +F M R ++ + +L
Sbjct: 6 GCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLG----SWTALL 61
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
SA + G E + + M + + I ++ + + +I+ A F++M ERD+
Sbjct: 62 SAFALSGHHEEAKTLFDTMQERDL----IAWTIMLTVLATFSNIEDAKYHFDQMPERDLV 117
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
+ +++A A G+ A E F +M + + ++ +L+A G V +F SM
Sbjct: 118 AWTAMLAANAERGQMENARETFDQMPERNL----FSWTSLLSAYGRSGDVKAAGRVFDSM 173
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVG---RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
E + + ++ S G R + A+D + D I ++LSA +G
Sbjct: 174 P-----EWNLVAWTAMLTGYSLSGDVVRAKRAFDSMPER----DLIAWTAMLSAYAFNGH 224
Query: 301 LQLGEQIAKRL 311
L+ +I +R+
Sbjct: 225 LRYTREIFQRM 235
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/524 (40%), Positives = 305/524 (58%), Gaps = 39/524 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +IHG V+KLGL N LV +YGKC A ++ DEMP D+V+ M+ Y
Sbjct: 156 GLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPG-RDMVSWNSMVAGYA 214
Query: 62 EHGLVENAF-------------------------------------EVFSRVKVKDTVCW 84
++G +A ++F ++K K + W
Sbjct: 215 QNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNVLYVKDMFVKLKEKSLISW 274
Query: 85 TAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGK 144
MI V N A+DL+ +MQ V P+ V+I VL AC L A LGR IH Y+ +
Sbjct: 275 NVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVER 334
Query: 145 HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEM 204
++ N ++ ALI+MY++CG + +A VF++M RDV ++ S+I+ M G+ +AV +
Sbjct: 335 KKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVAL 394
Query: 205 FREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLS 264
F++M + G P + FV VL ACSH GLVD G F M +YGI P IEHY C+VDLL
Sbjct: 395 FKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMA-EYGITPGIEHYNCMVDLLG 453
Query: 265 RVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVL 324
R G+ +EAY M + P+ + GSLLSAC+++ + + A L SG YVL
Sbjct: 454 RAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVL 513
Query: 325 LSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKK 384
LSN YA +G+W++ +R+ M G++K PG S++E+N+ ++ F+ GD H Q ++IYK
Sbjct: 514 LSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIYKA 573
Query: 385 MQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKN 444
+ L +K GY P T+ LHD+E+ +KE LA+HSE+LAI + +++TKP +TIR+ KN
Sbjct: 574 LGVLVGRMKELGYMPETDSALHDVEEEDKECHLAVHSEKLAIVFAILNTKPGSTIRITKN 633
Query: 445 LRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
+RVC DCH KLI+ I +R+II+RD +RFHHF +G CSCGDYW
Sbjct: 634 IRVCGDCHVATKLISKIAEREIIIRDTHRFHHFRDGVCSCGDYW 677
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 172/389 (44%), Gaps = 75/389 (19%)
Query: 3 REIHGQVL-KLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
+++H ++L L N S +KL+ Y CGE CY
Sbjct: 55 KKLHSKILIDQNLHPNPSLGIKLMRAYAACGE------------------------PCYT 90
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
H +F + K+ V + MI V NG AL +F+ M P+ T C
Sbjct: 91 RH--------IFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPC 142
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL ACS G L +G IH + K +D+N +G L++MY +C +D A +V +EM RD
Sbjct: 143 VLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRD 202
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF--EI 239
+ ++NS++AG A +GR +A+++ REM + ++P T +L A ++ ++ + ++
Sbjct: 203 MVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNVLYVKDM 262
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSAC- 295
F + E + + ++ + P EA D M+ + PD + + S+L AC
Sbjct: 263 FVKLK-----EKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACG 317
Query: 296 ---------KIH-----GKLQLGEQIAKRLLDCRSA-----------------DSGTYVL 324
+IH KL+ + L+D + D ++
Sbjct: 318 DLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTS 377
Query: 325 LSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
+ +AY SG+ K+AV + KM+++G +
Sbjct: 378 MISAYGMSGQGKDAVALFKKMRDSGFTPD 406
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/436 (44%), Positives = 284/436 (65%), Gaps = 1/436 (0%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
T +++ YV+ G +A +VF ++ KD + W+AM+ G + GE A LF ++ ++ ++
Sbjct: 432 TALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIK 491
Query: 114 PNEVTIVCVLSAC-SQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
PNE T V++AC S A E G+ H+Y K R++ V AL+ MY++ G+ID A +
Sbjct: 492 PNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHE 551
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
VF+ KERD+ ++NS+I+G + HG++ +A+E+F EM + + VTF+GV+ AC+H GL
Sbjct: 552 VFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGL 611
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
V+ G + F SM D+ I P ++HY C++DL SR G E+A I M P + +LL
Sbjct: 612 VEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLL 671
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
A ++H ++LGE A++L+ + DS YVLLSN YA++G W+E +R M + V+K
Sbjct: 672 GAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKK 731
Query: 353 EPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE 412
EPG S IEV N+ + F+ GD+ HP QIY K+ EL +K GY P T+ V HDIED +
Sbjct: 732 EPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKDAGYQPDTKNVFHDIEDEQ 791
Query: 413 KEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRN 472
KE L+ HSERLAI +GLI+T P I++VKNLRVC DCH+ KL++ + +R I+VRD N
Sbjct: 792 KETILSHHSERLAIAFGLIATPPEIPIQIVKNLRVCGDCHNFTKLVSLVEQRYIVVRDSN 851
Query: 473 RFHHFENGTCSCGDYW 488
RFHHF++G CSCGDYW
Sbjct: 852 RFHHFKDGLCSCGDYW 867
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 115/227 (50%), Gaps = 32/227 (14%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H Q +K GL + S LV++Y K D ++FDEM E
Sbjct: 112 GRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGE--------------- 156
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ V WT+++ G NG +LF +MQ + V PN T+
Sbjct: 157 -----------------RNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVST 199
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V++A G + +G +H+ + KH + V +LI++YSR G + A VF++M+ RD
Sbjct: 200 VIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRD 259
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
T+NS+IAG +G+ +E E+F +M G++PT +TF V+ +C+
Sbjct: 260 WVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCA 306
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 163/334 (48%), Gaps = 51/334 (15%)
Query: 8 QVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVE 67
+ LK G +++ L+ KC E DA+ LF M E +VV+
Sbjct: 320 KALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVS--------------- 364
Query: 68 NAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACS 127
WTAMI G ++NG +A++LF +M+R+ V+PN T +L+
Sbjct: 365 ----------------WTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHY 408
Query: 128 QLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNS 187
+ E+ H+ + K + + VG AL++ Y + G+ A++VFE ++ +D+ +++
Sbjct: 409 PVFVSEM----HAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSA 464
Query: 188 LIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDY 247
++AG A G + EA ++F ++I +GI+P + TF V+NAC+ + F + Y
Sbjct: 465 MLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHA----Y 520
Query: 248 GIEPQIEHYGCI----VDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK--- 300
I+ ++ + C+ V + ++ G + A++ K D + S++S HG+
Sbjct: 521 AIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQK-ERDLVSWNSMISGYSQHGQAKK 579
Query: 301 -LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSG 333
L++ +++ KR +D D+ T++ + A +G
Sbjct: 580 ALEVFDEMQKRNMD---VDAVTFIGVITACTHAG 610
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 111/192 (57%), Gaps = 7/192 (3%)
Query: 93 RNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALE--LGRWIHSYMGKHRIDLN 150
R+ + AL+LF + +++P+E T+ CV + C+ G+L+ LGR +H K + ++
Sbjct: 70 RDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICA--GSLDGKLGRQVHCQCVKFGL-VD 126
Query: 151 HI-VGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
H+ VG +L++MY + +++ +VF+EM ER+V ++ SL+AG + +G E+F +M
Sbjct: 127 HVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQ 186
Query: 210 NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRP 269
+G+ P + T V+ A + G+V +G ++ +M +G E I + ++ L SR+G
Sbjct: 187 YEGVLPNRYTVSTVIAALVNEGVVGIGLQV-HAMVVKHGFEEAIPVFNSLISLYSRLGML 245
Query: 270 EEAYDFITNMKI 281
+A D M+I
Sbjct: 246 RDARDVFDKMEI 257
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 113/213 (53%), Gaps = 7/213 (3%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFD----EMPECNDVVASTVM 56
E ++ Q++K G++ N T ++ + + F +M N + S+ +
Sbjct: 477 EAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSAL 536
Query: 57 INCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
+ Y + G +++A EVF R K +D V W +MI G ++G+ +AL++F EMQ+ N+ +
Sbjct: 537 VTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDA 596
Query: 117 VTIVCVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
VT + V++AC+ G +E G ++ +S + H I+ +I++YSR G ++KA+ +
Sbjct: 597 VTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIIN 656
Query: 176 EMK-ERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
EM T + +L+ +H R++E E+ E
Sbjct: 657 EMPFPPGATVWRTLLGAARVH-RNVELGELAAE 688
>gi|449477579|ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Cucumis sativus]
Length = 602
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 191/442 (43%), Positives = 286/442 (64%), Gaps = 2/442 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D + T M++ Y G E A ++F V KD V W +I L RN AL LF MQ
Sbjct: 161 DSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQ 220
Query: 109 RDNV--RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
+P++VT + +L AC+ L ALE G IH Y+ +H + + +LI+MYSRCG
Sbjct: 221 SPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSRCGR 280
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+DKA +VF++M E++V +++++I+GL+M+G EA+E F EM G+ P TF VL+A
Sbjct: 281 MDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSA 340
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
CSH GLVD G F M +++ I P + HYGCIVDLL R G ++AY+ I +M++ PD
Sbjct: 341 CSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDAT 400
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
M +LL AC+IHG LGE+I + L++ +S ++G YVLL N Y+S+G W + ++R MK
Sbjct: 401 MWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMK 460
Query: 347 EAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH 406
E G+ P C++IE+N +H+F + DI HP +++IYK++ E+ + +K+ GY LH
Sbjct: 461 EKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELH 520
Query: 407 DIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKI 466
+E +K +AL+ HSE+LAI +G+++T P TIR+ N+R C DCH+ K I+++ RK+
Sbjct: 521 RLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYNRKV 580
Query: 467 IVRDRNRFHHFENGTCSCGDYW 488
+VRDR+RFHHF+ G CSC D+W
Sbjct: 581 VVRDRSRFHHFQEGRCSCNDFW 602
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 38/199 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G IHG + + G + + L+ +Y +CG A ++FD+M E
Sbjct: 249 GERIHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEVFDKMTE--------------- 293
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K+ V W+AMI GL NG A++ F EMQ++ V P + T
Sbjct: 294 -----------------KNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTA 336
Query: 122 VLSACSQLGALELGRWIHSYMGKHRI---DLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
VLSACS G ++ G M + + +++H G ++++ R G +D+A ++ M+
Sbjct: 337 VLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHY--GCIVDLLGRAGMLDQAYELIMSME 394
Query: 179 ER-DVTTYNSLIAGLAMHG 196
R D T + +L+ +HG
Sbjct: 395 VRPDATMWRTLLGACRIHG 413
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 106/200 (53%), Gaps = 7/200 (3%)
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHS--Y 141
+ AM+ + L ++R+M+R VR + ++ + +C +L +L G IH+ +
Sbjct: 95 YNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIF 154
Query: 142 MGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEA 201
+ H+ D ++ +++++YS CG ++A ++F+E+ ++DV +N LI+ L + R+ +A
Sbjct: 155 INGHQAD--SLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDA 212
Query: 202 VEMFREMINQGI--RPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI 259
+ +F M + +P KVT + +L AC+ ++ G E + +G + +
Sbjct: 213 LGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFG-ERIHGYIQQHGYNTESNLCNSL 271
Query: 260 VDLLSRVGRPEEAYDFITNM 279
+ + SR GR ++AY+ M
Sbjct: 272 ISMYSRCGRMDKAYEVFDKM 291
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 90/200 (45%), Gaps = 10/200 (5%)
Query: 166 DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
D+ + ++F+ + V+ YN+++ ++ +E + M+R+M QG+R ++ +
Sbjct: 76 DLGYSRRLFDLLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVK 135
Query: 226 ACSHGGLVDLGFEIFQSMTRDY--GIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMK 280
+C L+ L F I Q R + G + ++DL S G+PEEA +D +
Sbjct: 136 SCI--KLLSLLFGI-QIHARIFINGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKD 192
Query: 281 IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQ 340
+ ++++ L + L L E + C+ D T +LL A A + +
Sbjct: 193 VVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQ-PDKVTCLLLLQACADLNALEFGER 251
Query: 341 IRAKMKEAGVQKEPG-CSSI 359
I +++ G E C+S+
Sbjct: 252 IHGYIQQHGYNTESNLCNSL 271
>gi|212721478|ref|NP_001131178.1| uncharacterized protein LOC100192486 [Zea mays]
gi|194690792|gb|ACF79480.1| unknown [Zea mays]
Length = 617
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/483 (41%), Positives = 300/483 (62%), Gaps = 2/483 (0%)
Query: 6 HGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGL 65
HG ++ G ++ + ++ +Y G+ + F E+ C DVV T M+ G
Sbjct: 137 HGAAVRWGHAADPHVQSGVLSMYAALGDVASSRAAFAEI-ACPDVVCVTAMVAALAAGGD 195
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
V+ A ++F + +D V W+AMI G + G AL LF EM E T+V VL+A
Sbjct: 196 VDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLSAGTTVGEATLVSVLTA 255
Query: 126 CSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTY 185
C+Q+G L+ G+W+H Y+ + ++ +G AL++MYS+CG + A++VFE M ER+V T+
Sbjct: 256 CAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVTAMEVFESMAERNVYTW 315
Query: 186 NSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR 245
S ++GLAM+G E +++F+ M GI+P V+FV VL CS GLVD G F SM +
Sbjct: 316 TSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCSMAGLVDEGRACFDSMDK 375
Query: 246 DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGE 305
YG++P EHYGC+VDL R GR ++A FI +M + P + G+LL+A +IH + LG+
Sbjct: 376 -YGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPMEPHEGVWGALLNASRIHNSVDLGK 434
Query: 306 QIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEI 365
+LL S + +V LSN YA S WK ++R MK GV+K PG S+IEV+ ++
Sbjct: 435 YALDKLLAIESENDAAHVQLSNIYAESQNWKGVSRVRGMMKAKGVKKVPGWSTIEVDGKV 494
Query: 366 HEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLA 425
HEF +G HP+ +I + E+ + ++L+GY+ +T VL DIE+ EKE A+++HSE+LA
Sbjct: 495 HEFYVGGRLHPRYNEIELMLAEMDRRLRLQGYTANTREVLFDIEEEEKEGAISLHSEKLA 554
Query: 426 ICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCG 485
+ +GLI IR+VKNLRVC DCH IKL++ + R+I++RDRNRFHHF+ G CSC
Sbjct: 555 LAFGLIVLPEDVEIRIVKNLRVCMDCHRYIKLVSKVFNREIVMRDRNRFHHFKGGECSCR 614
Query: 486 DYW 488
DYW
Sbjct: 615 DYW 617
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 32/177 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H V G++ + LV++Y KCG AM++F+ M E
Sbjct: 265 GKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVTAMEVFESMAE--------------- 309
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ WT+ + GL NG L LF+ M+ ++PN V+ V
Sbjct: 310 -----------------RNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVA 352
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
VL CS G ++ GR M K+ +D G ++++Y R G +D A+ +M
Sbjct: 353 VLRGCSMAGLVDEGRACFDSMDKYGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMP 409
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/490 (40%), Positives = 299/490 (61%), Gaps = 7/490 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRL--KLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINC 59
G+++H VL+ R + S LV LY KCG+F +A +F++MP D+V+ +++
Sbjct: 305 GKQVHAYVLR---REDFSFHFDNSLVTLYYKCGKFNEARAIFEKMP-AKDLVSWNALLSG 360
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
YV G + A +F +K K+ + W MI GL NG L LF M+R+ P +
Sbjct: 361 YVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAF 420
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+ +C+ LGA G+ H+ + K D + G ALI MY++CG +++A QVF M
Sbjct: 421 SGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPC 480
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
D ++N+LIA L HG +EAV+++ EM+ +GIRP ++TF+ VL ACSH GLVD G +
Sbjct: 481 LDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKY 540
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F SM Y I P +HY ++DLL R G+ EA I ++ P + +LLS C++HG
Sbjct: 541 FNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHG 600
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
++LG A +L GTY+LLSN YA++G+W+E ++R M++ GV+KE CS I
Sbjct: 601 NMELGIIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWI 660
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIE-DWEKEWALA 418
E+ ++H F++ D HP+ E +YK +Q+L + ++ GY P T VLHD+E D KE L
Sbjct: 661 EMETQVHTFLVDDTSHPEAEAVYKYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLT 720
Query: 419 IHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFE 478
HSE++A+ +GL+ P TTIR+ KNLR C DCH+ + ++ + +R II+RDR RFHHF
Sbjct: 721 THSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSKVVQRDIILRDRKRFHHFR 780
Query: 479 NGTCSCGDYW 488
NG CSCG++W
Sbjct: 781 NGECSCGNFW 790
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 177/398 (44%), Gaps = 64/398 (16%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
R +HG ++ G + + +L+++Y K E A QLFDE+ E D +A T M++ Y
Sbjct: 33 ARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISE-PDKIARTTMVSGYC 91
Query: 62 EHGLVENAFEVF--SRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
G + A VF + V ++DTV + AMI G N + A++LF +M+ + +P++ T
Sbjct: 92 ASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTY 151
Query: 120 VCVLSA----------CSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD--- 166
VL+ C Q A L K V AL+++YSRC
Sbjct: 152 ASVLAGLALVVDDEKQCVQFHAAAL---------KSGAGYVTSVSNALVSVYSRCASSPS 202
Query: 167 -IDKALQVFEEMKERD--------------------------------VTTYNSLIAGLA 193
+ A +VF+++ E+D + YN++I+G
Sbjct: 203 LLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYV 262
Query: 194 MHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQI 253
G EA+EM R M++ GI + T+ V+ AC++ L+ LG ++ + R
Sbjct: 263 NCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSFHF 322
Query: 254 EHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
++ +V L + G+ EA M A D + +LLS G + + I K +
Sbjct: 323 DN--SLVTLYYKCGKFNEARAIFEKMP-AKDLVSWNALLSGYVSSGHIGEAKLIFKEM-- 377
Query: 314 CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
+ + +++++ + A +G +E +++ + MK G +
Sbjct: 378 -KEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFE 414
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 171/358 (47%), Gaps = 18/358 (5%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGE----FKDAMQLFDEMPECNDVVASTVMINC 59
+ H LK G S LV +Y +C A ++FD++PE D + T M+
Sbjct: 170 QFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPE-KDERSWTTMMTG 228
Query: 60 YVEHGLVENAFEVFSRVKVK-DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVT 118
YV++G + E+ + V + AMI G V G AL++ R M + +E T
Sbjct: 229 YVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFT 288
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
V+ AC+ L+LG+ +H+Y+ + R D + +L+ +Y +CG ++A +FE+M
Sbjct: 289 YPSVIRACANARLLQLGKQVHAYVLR-REDFSFHFDNSLVTLYYKCGKFNEARAIFEKMP 347
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
+D+ ++N+L++G G EA +F+EM + I ++++ +++ + G + G +
Sbjct: 348 AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI----LSWMIMISGLAENGFGEEGLK 403
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM-KIAPDHIMLG--SLLSAC 295
+F M R+ G EP + + + +G F + KI D + +L++
Sbjct: 404 LFSCMKRE-GFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMY 462
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
G ++ +Q+ R + C DS ++ L A G EAV + +M + G++ +
Sbjct: 463 AKCGVVEEAQQVF-RTMPC--LDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPD 517
>gi|115446651|ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|46389885|dbj|BAD15486.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536636|dbj|BAF09019.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|125582482|gb|EAZ23413.1| hypothetical protein OsJ_07107 [Oryza sativa Japonica Group]
gi|215712305|dbj|BAG94432.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 586
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/471 (43%), Positives = 304/471 (64%), Gaps = 9/471 (1%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
L++LY G A ++ DVV+ M++ Y + G + A EVF+R+ ++ V
Sbjct: 119 LLKLYCSLGLLDRARRVLYSGGAALDVVSWNTMVSGYGKGGDLGAAREVFARMPERNLVS 178
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM- 142
W+AM+D VR GE AL +F M R+ RP+ V +V VL AC+ LGA+E GRW+H Y+
Sbjct: 179 WSAMVDACVRAGEFGEALWVFDRMMREEFRPDVVVLVSVLKACAHLGAVERGRWVHRYLE 238
Query: 143 ----GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRS 198
G R +L ++ AL++MY +CG ++ A QVF+ + RDV +N++I GLAM+G
Sbjct: 239 TGSFGGRRGNL--MLETALVDMYCKCGCMEDAWQVFDGVHRRDVVLWNAMIGGLAMNGYG 296
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGC 258
A+E+FR M+ +G P + TF+ VL AC+H G VD G +F+SM +DYGI+PQ EHYGC
Sbjct: 297 ERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKSM-QDYGIKPQREHYGC 355
Query: 259 IVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSAD 318
+ DLL R G EEA + +M + P G+L+S+C++H + +GE++ KRL++ D
Sbjct: 356 LADLLGRAGNVEEAEALLLDMPMEPHASQWGALMSSCQMHNDINVGERVGKRLIELEPYD 415
Query: 319 SGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQR 378
G YV+L N YA +G+W+EA IR M++ G +KE G S IE+N +HEFI GD RHP
Sbjct: 416 GGRYVVLFNLYAVNGRWEEARTIRQMMEDRGAKKETGLSFIELNGLVHEFISGDTRHPLT 475
Query: 379 EQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE-KEWALAIHSERLAICYGLISTKPYT 437
+IY ++++++ ++L GY T V+ D++D E K AL+ HSERLA+ +G+++
Sbjct: 476 RKIYALLEDIERRLQLIGYVKDTSQVIMDMDDEEDKGIALSYHSERLALAFGILNIPQGV 535
Query: 438 TIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
IR+VKNLRVC DCH KL++ + +R+IIVRDR+RFH F +G CSC DYW
Sbjct: 536 PIRIVKNLRVCRDCHVHSKLVSKLYEREIIVRDRHRFHVFRDGVCSCNDYW 586
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/479 (41%), Positives = 304/479 (63%), Gaps = 1/479 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++HG ++ G ++ + L+ LY + G ++F+ + D V T M+
Sbjct: 135 GLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSV-SYPDFVCRTAMVTACA 193
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G V A ++F + KD + W AMI G + GE AL+LF MQ + V+ N V+++
Sbjct: 194 RCGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVNGVSMIS 253
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLSAC+QLGAL+ GRW HSY+ +++I + +G L+++Y++CGD+DKA++VF M+E++
Sbjct: 254 VLSACTQLGALDQGRWAHSYIERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFWGMEEKN 313
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V T++S + GLAM+G + +++F M G+ P VTFV VL CS G VD G + F
Sbjct: 314 VYTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQKHFD 373
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM ++GIEPQ++HYGC+VDL +R GR E+A I M + + SLL A +++ L
Sbjct: 374 SMRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQMPMKAHAAVWSSLLHASRMYKNL 433
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LG +K++L+ +++ G YVLLSN YA S W +R MK GV+K+PGCS +EV
Sbjct: 434 ELGVLASKKMLELETSNHGAYVLLSNIYADSDDWDNVSHVRQSMKSKGVRKQPGCSVMEV 493
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N E+HEF +GD HP+ +I +++ + ++L GY T V+ DI++ EKE AL +HS
Sbjct: 494 NGEVHEFFVGDKSHPKYNEIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHS 553
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
E+ AI +G++S K IR+VKNLRVC DCH + +I+ I R+IIVRDRNRFHHF++G
Sbjct: 554 EKAAIAFGIMSLKADVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDG 612
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 178/489 (36%), Positives = 279/489 (57%), Gaps = 33/489 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG IHG V+K G+ L+ LYGK G+ + +LF+++
Sbjct: 655 EGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLISSCKLFEDL---------------- 698
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
VK+ V W MI ++NG L F + ++P++ T +
Sbjct: 699 ----------------SVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFL 742
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL C +G + L + IH + + N + AL+++Y++ G ++ + VF E+
Sbjct: 743 AVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEITSP 802
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D + +++A A HG +A++ F M++ G+ P VTF +LNACSH GLV+ G F
Sbjct: 803 DSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYYF 862
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
++M++ Y IEP+++HY C+VDL+ R G ++AY I M + P + G+LL AC+++
Sbjct: 863 ETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKD 922
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
QLG + AKRL + D Y++LSN Y++SG WK+A +IR MK+ G+ + G S IE
Sbjct: 923 TQLGTKAAKRLFELEPRDGRNYIMLSNIYSASGLWKDASRIRNLMKQKGLVRASGYSYIE 982
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLE-GYSPSTEVVLHDIEDWEKEWALAI 419
N+IH+F++GD HP+ E+I KK++E+++ +K E G+ TE VLHD+++ KE +
Sbjct: 983 HGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSELGFKSRTEFVLHDVDEDVKEEMINQ 1042
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE++A+ +GL+ P I + KNLR+C DCH K I+ I KR+II+RD RFHHF
Sbjct: 1043 HSEKIAMAFGLLVISPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLE 1102
Query: 480 GTCSCGDYW 488
G+CSC DYW
Sbjct: 1103 GSCSCRDYW 1111
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 88/432 (20%), Positives = 174/432 (40%), Gaps = 104/432 (24%)
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM--QRDNVRPNEVTI 119
+H ++ A ++ R +MI ++ ++ D + + + ++P+ T+
Sbjct: 60 DHTYLDYANQILDRSDKPTLFALNSMIRAHCKSPVPEKSFDFYSRILSSGNGLKPDNYTV 119
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMY------------------ 161
++ AC+ LG E G +H + D + V LI++Y
Sbjct: 120 NFLVQACTGLGMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSVSY 179
Query: 162 -------------SRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM 208
+RCGD+ A ++FE M E+D +N++I+G A G S EA+ +F M
Sbjct: 180 PDFVCRTAMVTACARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLM 239
Query: 209 INQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGR 268
+G++ V+ + VL+AC+ G +D G + R+ I+ + +VDL ++ G
Sbjct: 240 QLEGVKVNGVSMISVLSACTQLGALDQGRWAHSYIERN-KIKITVRLGTTLVDLYAKCGD 298
Query: 269 PEEAYDFITNMK----------------------------------IAPDHIMLGSLLSA 294
++A + M+ + P+ + S+L
Sbjct: 299 MDKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRG 358
Query: 295 CKIHGKLQLGEQIAKRLLDCRSADSGT------YVLLSNAYASSGKWKEAVQIRAKMKEA 348
C + G + G+ + D + G Y L + YA +G+ ++AV I
Sbjct: 359 CSVVGFVDEGQ----KHFDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSI------- 407
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQ----ELKQIVKLEGYSPSTEVV 404
+Q+ P + H + + H R +YK ++ K++++LE + V+
Sbjct: 408 -IQQMP--------MKAHAAVWSSLLHASR--MYKNLELGVLASKKMLELETSNHGAYVL 456
Query: 405 LHDI----EDWE 412
L +I +DW+
Sbjct: 457 LSNIYADSDDWD 468
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 38/199 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR H + + ++ LV+LY KCG+ AM++F M E
Sbjct: 266 QGRWAHSYIERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFWGMEE-------------- 311
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
K+ W++ ++GL NG + L LF M++D V PN VT V
Sbjct: 312 ------------------KNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTFV 353
Query: 121 CVLSACSQLGALELG-RWIHSYMGKHRID--LNHIVGGALINMYSRCGDIDKALQVFEEM 177
VL CS +G ++ G + S + I+ L+H G L+++Y+R G ++ A+ + ++M
Sbjct: 354 SVLRGCSVVGFVDEGQKHFDSMRNEFGIEPQLDHY--GCLVDLYARAGRLEDAVSIIQQM 411
Query: 178 KER-DVTTYNSLIAGLAMH 195
+ ++SL+ M+
Sbjct: 412 PMKAHAAVWSSLLHASRMY 430
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/492 (40%), Positives = 310/492 (63%), Gaps = 5/492 (1%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GRE+H +++ + ++ LV++Y KCG A +++D+ + DV+ + VM++ +
Sbjct: 598 KGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIK-KDVILNNVMVSAF 656
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V G +A +F +++ ++T W +++ G G + + F EM ++ + +T+V
Sbjct: 657 VNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMV 716
Query: 121 CVLSACSQLGALELGRWIHSYM-GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+++ CS L ALE G +HS + K ++ + ++ AL++MYS+CG I KA VF+ M
Sbjct: 717 TIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNG 776
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+++ ++N++I+G + HG S EA+ ++ EM +G+ P +VTF+ +L+ACSH GLV+ G I
Sbjct: 777 KNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRI 836
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F SM DY IE + EHY C+VDLL R GR E+A +F+ M I P+ G+LL AC++H
Sbjct: 837 FTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHK 896
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+ +G A+RL + + G YV++SN YA++G+WKE IR MK GV+K+PG S I
Sbjct: 897 DMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWI 956
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWA--- 416
E+N+EI F G HP+ E+IY ++ L K GY P T +L +++D ++E
Sbjct: 957 EINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEY 1016
Query: 417 LAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHH 476
L HSERLA+ GLIS +TIRV KNLR+C DCH+ K I+ IT R+II RD NRFHH
Sbjct: 1017 LLQHSERLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHH 1076
Query: 477 FENGTCSCGDYW 488
FENG CSCGDYW
Sbjct: 1077 FENGKCSCGDYW 1088
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 173/375 (46%), Gaps = 67/375 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H +++ G + + L+++Y KC + + +++FDEM E
Sbjct: 295 GKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGE--------------- 339
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ V W ++I + G AL LF MQ + N +
Sbjct: 340 -----------------RNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGS 382
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L A + L + GR +H ++ ++ ++ + I+G AL++MYS+CG +++A QVF + ER+
Sbjct: 383 ILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERN 442
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQ-GIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+YN+L+AG G++ EA+E++ +M ++ GI+P + TF +L C++ + G +I
Sbjct: 443 EVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIH 502
Query: 241 -----QSMTRDYGIEPQIEH-------------------------YGCIVDLLSRVGRPE 270
++T++ +E ++ H + +++ + G +
Sbjct: 503 AHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQ 562
Query: 271 EAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTY-VLLS 326
EA M+ I PD L S+LS+C Q G ++ ++ + G V+L
Sbjct: 563 EALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLV 622
Query: 327 NAYASSGKWKEAVQI 341
+ YA G A ++
Sbjct: 623 DMYAKCGSMDYAWKV 637
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 172/355 (48%), Gaps = 44/355 (12%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GRE+HG +++ L S+ LV++Y KCG ++A Q+F + E N+ V+ ++ Y
Sbjct: 395 KGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNE-VSYNALLAGY 453
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ-RDNVRPNEVTI 119
V+ G E AL+L+ +MQ D ++P++ T
Sbjct: 454 VQEGKAE-------------------------------EALELYHDMQSEDGIQPDQFTF 482
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+L+ C+ GR IH+++ + I N IV L++MYS CG ++ A ++F M E
Sbjct: 483 TTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAE 542
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
R+ ++NS+I G +G + EA+ +F++M GI+P + +L++C G E+
Sbjct: 543 RNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGREL 602
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACK 296
+ R+ E I +VD+ ++ G + A YD + +++M+ + +++ +
Sbjct: 603 HNFIVRNTMEEEGILQV-VLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGR 661
Query: 297 IHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
+ L +Q+ +R ++ + + YA+ G KE+ +M E+ ++
Sbjct: 662 ANDAKNLFDQMEQR-------NTALWNSILAGYANKGLKKESFNHFLEMLESDIE 709
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 165/334 (49%), Gaps = 39/334 (11%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
+++ T +++ Y E G + A E+F+R+ ++ W +MI+G +NGE AL LF++MQ
Sbjct: 513 NIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQ 572
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ ++P+ ++ +LS+C L + GR +H+++ ++ ++ I+ L++MY++CG +D
Sbjct: 573 LNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMD 632
Query: 169 KALQV-------------------------------FEEMKERDVTTYNSLIAGLAMHGR 197
A +V F++M++R+ +NS++AG A G
Sbjct: 633 YAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGL 692
Query: 198 SIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYG 257
E+ F EM+ I +T V ++N CS ++ G ++ + + + +
Sbjct: 693 KKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLET 752
Query: 258 CIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG----KLQLGEQIAKRLLD 313
+VD+ S+ G +A NM + + +++S HG L L E++ K+ +
Sbjct: 753 ALVDMYSKCGAITKARTVFDNMN-GKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGM- 810
Query: 314 CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+ T++ + +A + +G +E ++I M+E
Sbjct: 811 --YPNEVTFLAILSACSHTGLVEEGLRIFTSMQE 842
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 102/251 (40%), Gaps = 46/251 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKD---AMQLFDEMPECNDVVASTVMIN 58
G+ IH Q++ G + K++ LY + G D A +LF+EMPE
Sbjct: 90 GKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPE------------ 137
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVT 118
++ W MI R + L L+ M+ ++ T
Sbjct: 138 --------------------RNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFT 177
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
V+ AC + + R + S + K ++ N VGGAL++ Y+R G +D A+ +E++
Sbjct: 178 FPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIE 237
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS---------- 228
V T+N++IAG EA +F M+ G+ P TF L C
Sbjct: 238 GTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQ 297
Query: 229 -HGGLVDLGFE 238
H L+ GF+
Sbjct: 298 VHSKLIACGFK 308
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 96/238 (40%), Gaps = 40/238 (16%)
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDK---AL 171
N + ++ C + + G+ IH+ M + + + + ++ +Y+R G +D A
Sbjct: 70 NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYAR 129
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
++FEEM ER++T +N++I A +E + ++ M G K TF V+ AC
Sbjct: 130 KLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACI--A 187
Query: 232 LVDL-GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA------------------ 272
+ D+ G QS G+ + G +VD +R G ++A
Sbjct: 188 MEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAV 247
Query: 273 ----------------YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC 314
+D + + + PD+ S L C G+Q+ +L+ C
Sbjct: 248 IAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIAC 305
>gi|8778758|gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
Length = 695
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/503 (42%), Positives = 305/503 (60%), Gaps = 48/503 (9%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+++H Q++K G + L+ LYG CG C D+
Sbjct: 226 EGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCG--------------CLDL---------- 261
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
A +VF + + V W +MID LVR GE AL LFREMQR + P+ T+
Sbjct: 262 --------ARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQ 312
Query: 121 CVLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
VLSAC+ LG+L LG W H+++ + + ++ +V +LI MY +CG + A QVF+ M
Sbjct: 313 SVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGM 372
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN--QGIRPTKVTFVGVLNACSHGGLVDL 235
++RD+ ++N++I G A HGR+ EA+ F M++ + +RP VTFVG+L AC+H G V+
Sbjct: 373 QKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNK 432
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G + F M RDY IEP +EHYGCIVDL++R G EA D + +M + PD ++ SLL AC
Sbjct: 433 GRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDAC 492
Query: 296 -KIHGKLQLGEQIAKRLLDCRSAD-------SGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
K ++L E+IA+ ++ + + SG YVLLS YAS+ +W + +R M E
Sbjct: 493 CKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSE 552
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSP--STEVVL 405
G++KEPGCSSIE+N HEF GD HPQ +QIY++++ + ++ GY P S ++
Sbjct: 553 HGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLV 612
Query: 406 HDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRK 465
D KE++L +HSERLAI +GLI+ P T IR+ KNLRVCNDCH + KLI+ + +
Sbjct: 613 DATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTE 672
Query: 466 IIVRDRNRFHHFENGTCSCGDYW 488
IIVRDR RFHHF++G+CSC DYW
Sbjct: 673 IIVRDRVRFHHFKDGSCSCLDYW 695
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 148/362 (40%), Gaps = 62/362 (17%)
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRN-GEMARALDLFREM-QRDNVRPNEVTIVCVL 123
V AF VF ++ + W +I + A L+R+M +R P++ T VL
Sbjct: 156 VNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVL 215
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
AC+ + G+ +H + KH + V LI++Y CG +D A +VF+EM ER +
Sbjct: 216 KACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLV 275
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF------ 237
++NS+I L G A+++FREM + P T VL+AC+ G + LG
Sbjct: 276 SWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFL 334
Query: 238 --------------------------------EIFQSMTRDYGIEPQIEHYGCIVDLLSR 265
++FQ M + + + ++ +
Sbjct: 335 LRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKR-----DLASWNAMILGFAT 389
Query: 266 VGRPEEAYDFITNM-----KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD--CRSAD 318
GR EEA +F M + P+ + LL AC G + G Q ++ C
Sbjct: 390 HGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPA 449
Query: 319 SGTYVLLSNAYASSGKWKEAVQIRAKM---KEAGVQKE--PGC----SSIEVNNEIHEFI 369
Y + + A +G EA+ + M +A + + C +S+E++ EI I
Sbjct: 450 LEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNI 509
Query: 370 LG 371
+G
Sbjct: 510 IG 511
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 94/236 (39%), Gaps = 48/236 (20%)
Query: 155 GALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMH-GRSIEAVEMFREMINQG- 212
G ++ + S D++ A +VF+ ++ +N+LI A R EA ++R+M+ +G
Sbjct: 144 GKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGE 203
Query: 213 IRPTKVTFVGVLNACS-----------------HG------------------GLVDLGF 237
P K TF VL AC+ HG G +DL
Sbjct: 204 SSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLAR 263
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK--IAPDHIMLGSLLSAC 295
++F M E + + ++D L R G + A M+ PD + S+LSAC
Sbjct: 264 KVFDEMP-----ERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSAC 318
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNA----YASSGKWKEAVQIRAKMKE 347
G L LG LL D VL+ N+ Y G + A Q+ M++
Sbjct: 319 AGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQK 374
>gi|226530803|ref|NP_001148047.1| LOC100281656 [Zea mays]
gi|195615502|gb|ACG29581.1| selenium-binding protein-like [Zea mays]
Length = 597
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/443 (43%), Positives = 282/443 (63%), Gaps = 3/443 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D + +T ++ CY G + A ++F + V+D V W +I RN AL LF EM+
Sbjct: 155 DALLATSLMRCYANRGDGDGARKLFDEMPVRDAVAWNVLITCYARNRRTKDALKLFEEMR 214
Query: 109 RDNVR--PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
+ P++VT + +L ACS LGAL+ G + +Y +H V +LI MY RCG
Sbjct: 215 GKDSESEPDDVTCILLLQACSSLGALDFGEQVWAYAEEHGYGGELKVRNSLITMYLRCGC 274
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+DKA +VF ++ V T+ ++I+GLA +G +A+ +F EMI + P + TF GVL+A
Sbjct: 275 VDKAYRVFSGTPQKSVVTWTAMISGLAANGFGNDAISVFEEMIRSDVAPDEQTFTGVLSA 334
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITN-MKIAPDH 285
CSH GLVD GF F M +YG++P + HYGCIVDL+ R G +EAY+F+TN MK+APD
Sbjct: 335 CSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYEFVTNEMKVAPDA 394
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
+ +LL AC+IHG + LGE++ L++ ++ +G YVLL N YA+ G+W + +IR M
Sbjct: 395 TIWRTLLGACRIHGHVDLGERVIGNLIELKAQQAGDYVLLLNTYAAVGEWSKVSEIRKLM 454
Query: 346 KEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVL 405
+E G+Q PGC+++E N +HEFI D HP++ +IY+ + E+ + +++ GY P+ L
Sbjct: 455 QEEGIQTTPGCTTVEHNGTVHEFIADDDAHPRKVEIYENLSEIYKQLRIAGYVPNVSSEL 514
Query: 406 HDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRK 465
HD++ KE AL HSE+LAI + L+ T + IR+ KNLRVC DCH+ K+ + I +R
Sbjct: 515 HDLDSEGKESALTYHSEKLAIAFALLVTPQHRPIRLAKNLRVCVDCHNFTKMFSAIYRRI 574
Query: 466 IIVRDRNRFHHFENGTCSCGDYW 488
+IVRDR RFHHF+ G CSC DYW
Sbjct: 575 VIVRDRTRFHHFQGGKCSCNDYW 597
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/439 (45%), Positives = 287/439 (65%), Gaps = 8/439 (1%)
Query: 50 VVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
V +++ Y G E+A VF ++ +D V ++I+G NG + AL LFREM
Sbjct: 165 VFVQNSLLHIYAACGDTESAHNVFELMRDRDLVAXISVINGFALNGRPSEALTLFREMSA 224
Query: 110 DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDK 169
+ V P+ T+V +LSA ++LGALELGR +H Y+ K + N V +L+++Y++C I +
Sbjct: 225 EGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLRENSHVTNSLLDLYAKCDAIWE 284
Query: 170 ALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH 229
ER+ ++ SLI GLA++G EA+E+FREM QG+ P+++TFVGVL ACSH
Sbjct: 285 X--------ERNAVSWTSLIVGLAVNGFGEEALELFREMEGQGLVPSEITFVGVLYACSH 336
Query: 230 GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLG 289
G++D GF+ F+ M ++GI P+IEHYGC+VDLLSR G ++AY++I NM + P+ +
Sbjct: 337 CGMLDEGFDYFRRMKEEFGIMPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVTWR 396
Query: 290 SLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
+LL AC IHG L LGE LL SG YVLLSN Y S +W + IR M + G
Sbjct: 397 TLLGACTIHGHLGLGETARSHLLKLEPKHSGDYVLLSNLYTSECRWADVQLIRRSMLKDG 456
Query: 350 VQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIE 409
V+K G S +E+ N ++EF +G+ HPQ + +Y ++++ +++KLEGY P T VL DIE
Sbjct: 457 VKKTSGYSLVELGNRVYEFTMGNRSHPQSQDVYALLEKITELLKLEGYVPHTANVLADIE 516
Query: 410 DWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVR 469
+ EKE AL+ HSE+ AI + ++T P TTIRV+KNLRVC DCH IKL+A + R+I++R
Sbjct: 517 EEEKEQALSYHSEKXAIAFMRLNTAPGTTIRVMKNLRVCADCHMAIKLMAKVYDREIVIR 576
Query: 470 DRNRFHHFENGTCSCGDYW 488
DR RFHHF G+CSC DYW
Sbjct: 577 DRGRFHHFRGGSCSCKDYW 595
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 121/269 (44%), Gaps = 27/269 (10%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A+ VF+ + + W M G + + AL +R+M + P+ T +L A S+
Sbjct: 83 AYNVFTMIHNPNVFTWNTMTRGYAESDNPSPALRFYRQMIVSRIEPDTHTYPFLLKAISK 142
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
+ G IHS ++ + V +L+++Y+ CGD + A VFE M++RD+ S+
Sbjct: 143 SLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAHNVFELMRDRDLVAXISV 202
Query: 189 IAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYG 248
I G A++GR EA+ +FREM +G+ P T V +L+A + G ++LG + + + G
Sbjct: 203 INGFALNGRPSEALTLFREMSAEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLK-VG 261
Query: 249 IEPQIEHYGCIVDLLSRV-----------------------GRPEEAYDFITNMK---IA 282
+ ++DL ++ G EEA + M+ +
Sbjct: 262 LRENSHVTNSLLDLYAKCDAIWEXERNAVSWTSLIVGLAVNGFGEEALELFREMEGQGLV 321
Query: 283 PDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
P I +L AC G L G +R+
Sbjct: 322 PSEITFVGVLYACSHCGMLDEGFDYFRRM 350
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/469 (43%), Positives = 290/469 (61%), Gaps = 15/469 (3%)
Query: 32 GEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDG- 90
G +A QLFD MP DVVAST MI+ G + A E+F + ++ V WT+MI G
Sbjct: 101 GRVDEARQLFDMMP-VKDVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGE 159
Query: 91 ------------LVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWI 138
R G AL LF MQR+ VRP+ +++ VLS C L +L+ GR +
Sbjct: 160 KDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQV 219
Query: 139 HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRS 198
HS + + + D++ V LI MY +CGD+ A +VF+ +D+ +NS+IAG A HG
Sbjct: 220 HSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFG 279
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGC 258
+A+E+F +M + I P ++TF+GVL+ACS+ G V G EIF+SM Y ++P+ EHY C
Sbjct: 280 EKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYAC 339
Query: 259 IVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSAD 318
+VDLL R G+ EA + I NM + D I+ G+LL AC+ H L L E AK+LL +
Sbjct: 340 MVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNN 399
Query: 319 SGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFI-LGDIRHPQ 377
+G Y+LLSN Y+S +WK+ V++R M+ ++K PGCS IEV+ ++H F G HP+
Sbjct: 400 AGPYILLSNLYSSQSRWKDVVELRKTMRAKNLRKSPGCSWIEVDKKVHIFSGGGSTSHPE 459
Query: 378 REQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYT 437
E I KK+ +L +++ GY P V+HD+++ EK +L HSE+LA+ YGL+
Sbjct: 460 HEMILKKLGKLGALLREAGYCPDGSFVMHDVDEEEKVHSLRDHSEKLAVAYGLLKVPEGM 519
Query: 438 TIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGD 486
IRV+KNLRVC D HS IKLIA +T R+II+RD NRFHHF++G CSC D
Sbjct: 520 PIRVMKNLRVCGDSHSTIKLIAQVTGREIILRDTNRFHHFKDGLCSCSD 568
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 158/359 (44%), Gaps = 57/359 (15%)
Query: 35 KDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRN 94
++A +LFD+MPE N ++ +++ YV++G++ A +VF ++ ++ V WTAMI G V+
Sbjct: 11 REARKLFDKMPETN-TISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQE 69
Query: 95 GEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG 154
G + A LF M NV V+ +L + G ++ R + M + +
Sbjct: 70 GLIEEAELLFWRMPERNV----VSWTVMLGGLIEDGRVDEARQLFDMMPVKDV----VAS 121
Query: 155 GALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAG-------------LAMHGRSIEA 201
+I+ G + +A ++F+EM +R+V + S+I+G G +EA
Sbjct: 122 TNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEA 181
Query: 202 VEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR---------------- 245
+ +F M +G+RP+ + + VL+ C +D G ++ + R
Sbjct: 182 LALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITM 241
Query: 246 --------------DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIML 288
D I + I+ ++ G E+A + +M IAPD I
Sbjct: 242 YIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITF 301
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT--YVLLSNAYASSGKWKEAVQIRAKM 345
+LSAC GK++ G +I + + D T Y + + +GK EA+ + M
Sbjct: 302 IGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENM 360
>gi|110737061|dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/503 (42%), Positives = 305/503 (60%), Gaps = 48/503 (9%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+++H Q++K G + L+ LYG CG C D+
Sbjct: 160 EGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCG--------------CLDL---------- 195
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
A +VF + + V W +MID LVR GE AL LFREMQR + P+ T+
Sbjct: 196 --------ARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQ 246
Query: 121 CVLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
VLSAC+ LG+L LG W H+++ + + ++ +V +LI MY +CG + A QVF+ M
Sbjct: 247 SVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGM 306
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN--QGIRPTKVTFVGVLNACSHGGLVDL 235
++RD+ ++N++I G A HGR+ EA+ F M++ + +RP VTFVG+L AC+H G V+
Sbjct: 307 QKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNK 366
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G + F M RDY IEP +EHYGCIVDL++R G EA D + +M + PD ++ SLL AC
Sbjct: 367 GRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDAC 426
Query: 296 -KIHGKLQLGEQIAKRLLDCRSAD-------SGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
K ++L E+IA+ ++ + + SG YVLLS YAS+ +W + +R M E
Sbjct: 427 CKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSE 486
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSP--STEVVL 405
G++KEPGCSSIE+N HEF GD HPQ +QIY++++ + ++ GY P S ++
Sbjct: 487 HGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLV 546
Query: 406 HDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRK 465
D KE++L +HSERLAI +GLI+ P T IR+ KNLRVCNDCH + KLI+ + +
Sbjct: 547 DATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTE 606
Query: 466 IIVRDRNRFHHFENGTCSCGDYW 488
IIVRDR RFHHF++G+CSC DYW
Sbjct: 607 IIVRDRVRFHHFKDGSCSCLDYW 629
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 118/286 (41%), Gaps = 51/286 (17%)
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRN-GEMARALDLFREM-QRDNVRPNEVTIVCVL 123
V AF VF ++ + W +I + A L+R+M +R P++ T VL
Sbjct: 90 VNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVL 149
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
AC+ + G+ +H + KH + V LI++Y CG +D A +VF+EM ER +
Sbjct: 150 KACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLV 209
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF------ 237
++NS+I L G A+++FREM + P T VL+AC+ G + LG
Sbjct: 210 SWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFL 268
Query: 238 --------------------------------EIFQSMTRDYGIEPQIEHYGCIVDLLSR 265
++FQ M + + + ++ +
Sbjct: 269 LRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKR-----DLASWNAMILGFAT 323
Query: 266 VGRPEEAYDFITNM-----KIAPDHIMLGSLLSACKIHGKLQLGEQ 306
GR EEA +F M + P+ + LL AC G + G Q
Sbjct: 324 HGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQ 369
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 94/236 (39%), Gaps = 48/236 (20%)
Query: 155 GALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMH-GRSIEAVEMFREMINQG- 212
G ++ + S D++ A +VF+ ++ +N+LI A R EA ++R+M+ +G
Sbjct: 78 GKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGE 137
Query: 213 IRPTKVTFVGVLNACS-----------------HG------------------GLVDLGF 237
P K TF VL AC+ HG G +DL
Sbjct: 138 SSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLAR 197
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK--IAPDHIMLGSLLSAC 295
++F M E + + ++D L R G + A M+ PD + S+LSAC
Sbjct: 198 KVFDEMP-----ERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSAC 252
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNA----YASSGKWKEAVQIRAKMKE 347
G L LG LL D VL+ N+ Y G + A Q+ M++
Sbjct: 253 AGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQK 308
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 190/487 (39%), Positives = 306/487 (62%), Gaps = 5/487 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLK----LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMI 57
G+ +HGQ+++L L LV LY K G+ A ++FD M DVV+ ++
Sbjct: 317 GKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTM-NLKDVVSWNTIL 375
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y++ G ++ A EVF + K+ + W M+ G V G AL LF +M+ ++V+P +
Sbjct: 376 SGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDY 435
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T ++AC +LGAL+ GR +H+++ + + ++ G AL+ MY++CG ++ A VF M
Sbjct: 436 TYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVM 495
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
D ++N++I+ L HG EA+E+F +M+ +GI P +++F+ +L AC+H GLVD GF
Sbjct: 496 PNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGF 555
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F+SM RD+GI P +HY ++DLL R GR EA D I M P + ++LS C+
Sbjct: 556 HYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRT 615
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
+G ++ G A +L GTY+LLSN Y+++G+W +A ++R M++ GV+KEPGCS
Sbjct: 616 NGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCS 675
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IEV ++IH F++GD +HP+ +++Y+ ++ + ++ GY P T+ VLHD+E EKE+ L
Sbjct: 676 WIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYIL 735
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LA+ +GL+ P T+ V+KNLR+C DCH+ + ++ R+I+VRD RFHHF
Sbjct: 736 FAHSEKLAVGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHF 795
Query: 478 ENGTCSC 484
++G CSC
Sbjct: 796 KDGECSC 802
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 162/374 (43%), Gaps = 76/374 (20%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFK---DAMQLFDEMPECNDVVASTVMINCY 60
++H VLK G + S L+ LY KC + DA ++ DEMP+ +D+ +T+++ Y
Sbjct: 184 QLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVG-Y 242
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V G V A VF V K V W AMI G V++G A A +LFR M + V +E T
Sbjct: 243 VRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFT 302
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHI------VGGALINMYSRCGDIDKALQVF 174
VLSAC+ G G+ +H + R+ N + V AL+ +YS+ G I A ++F
Sbjct: 303 SVLSACANAGFFVHGKSVHGQI--IRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIF 360
Query: 175 EEMKERDVTTYNS-------------------------------LIAGLAMHGRSIEAVE 203
+ M +DV ++N+ +++G G S +A++
Sbjct: 361 DTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALK 420
Query: 204 MFREMINQGIRPTKVTFVGVLNACS-----------HGGLVDLGFEIFQSMTRD------ 246
+F +M + ++P T+ G + AC H LV GFE S
Sbjct: 421 LFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYA 480
Query: 247 -----------YGIEPQIE--HYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGS 290
+ + P ++ + ++ L + G EA + M I PD I +
Sbjct: 481 KCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLT 540
Query: 291 LLSACKIHGKLQLG 304
+L+AC G + G
Sbjct: 541 ILTACNHAGLVDEG 554
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 142/351 (40%), Gaps = 28/351 (7%)
Query: 19 STRLKLVELYGKCGEFKDAMQLFDEMPECN-DVVASTVMINCYVEHGLVENAFEVF---- 73
S LV G +DA FD +P D V M++ + L A VF
Sbjct: 93 SPATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALL 152
Query: 74 -SRVKVKDTVCWTAMID--GLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLG 130
S D +TA+I G + N L + + VLS + L
Sbjct: 153 GSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGA-------AAVLSVSNALI 205
Query: 131 ALEL------GRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
AL + W + D + + ++ Y R GD++ A VFEE+ +
Sbjct: 206 ALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVV 265
Query: 185 YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT 244
+N++I+G G +A E+FR M+++ + + TF VL+AC++ G G + +
Sbjct: 266 WNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQII 325
Query: 245 R---DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
R ++ E + +V L S+ G+ A M + D + ++LS G L
Sbjct: 326 RLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLK-DVVSWNTILSGYIDSGCL 384
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
++ K + + +++++ + Y G ++A+++ +M+ V+
Sbjct: 385 DKAVEVFKVM---PYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKP 432
>gi|5080805|gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/503 (42%), Positives = 305/503 (60%), Gaps = 48/503 (9%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+++H Q++K G + L+ LYG CG C D+
Sbjct: 146 EGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCG--------------CLDL---------- 181
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
A +VF + + V W +MID LVR GE AL LFREMQR + P+ T+
Sbjct: 182 --------ARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQ 232
Query: 121 CVLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
VLSAC+ LG+L LG W H+++ + + ++ +V +LI MY +CG + A QVF+ M
Sbjct: 233 SVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGM 292
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN--QGIRPTKVTFVGVLNACSHGGLVDL 235
++RD+ ++N++I G A HGR+ EA+ F M++ + +RP VTFVG+L AC+H G V+
Sbjct: 293 QKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNK 352
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G + F M RDY IEP +EHYGCIVDL++R G EA D + +M + PD ++ SLL AC
Sbjct: 353 GRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDAC 412
Query: 296 -KIHGKLQLGEQIAKRLLDCRSAD-------SGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
K ++L E+IA+ ++ + + SG YVLLS YAS+ +W + +R M E
Sbjct: 413 CKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSE 472
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSP--STEVVL 405
G++KEPGCSSIE+N HEF GD HPQ +QIY++++ + ++ GY P S ++
Sbjct: 473 HGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLV 532
Query: 406 HDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRK 465
D KE++L +HSERLAI +GLI+ P T IR+ KNLRVCNDCH + KLI+ + +
Sbjct: 533 DATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTE 592
Query: 466 IIVRDRNRFHHFENGTCSCGDYW 488
IIVRDR RFHHF++G+CSC DYW
Sbjct: 593 IIVRDRVRFHHFKDGSCSCLDYW 615
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 118/286 (41%), Gaps = 51/286 (17%)
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRN-GEMARALDLFREM-QRDNVRPNEVTIVCVL 123
V AF VF ++ + W +I + A L+R+M +R P++ T VL
Sbjct: 76 VNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVL 135
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
AC+ + G+ +H + KH + V LI++Y CG +D A +VF+EM ER +
Sbjct: 136 KACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLV 195
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF------ 237
++NS+I L G A+++FREM + P T VL+AC+ G + LG
Sbjct: 196 SWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFL 254
Query: 238 --------------------------------EIFQSMTRDYGIEPQIEHYGCIVDLLSR 265
++FQ M + + + ++ +
Sbjct: 255 LRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKR-----DLASWNAMILGFAT 309
Query: 266 VGRPEEAYDFITNM-----KIAPDHIMLGSLLSACKIHGKLQLGEQ 306
GR EEA +F M + P+ + LL AC G + G Q
Sbjct: 310 HGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQ 355
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 94/236 (39%), Gaps = 48/236 (20%)
Query: 155 GALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMH-GRSIEAVEMFREMINQG- 212
G ++ + S D++ A +VF+ ++ +N+LI A R EA ++R+M+ +G
Sbjct: 64 GKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGE 123
Query: 213 IRPTKVTFVGVLNACS-----------------HG------------------GLVDLGF 237
P K TF VL AC+ HG G +DL
Sbjct: 124 SSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLAR 183
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK--IAPDHIMLGSLLSAC 295
++F M E + + ++D L R G + A M+ PD + S+LSAC
Sbjct: 184 KVFDEMP-----ERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSAC 238
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNA----YASSGKWKEAVQIRAKMKE 347
G L LG LL D VL+ N+ Y G + A Q+ M++
Sbjct: 239 AGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQK 294
>gi|414870414|tpg|DAA48971.1| TPA: selenium-binding protein-like protein [Zea mays]
Length = 611
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/443 (43%), Positives = 282/443 (63%), Gaps = 3/443 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D + +T ++ CY G + A ++F + V+D V W +I RN AL LF EM+
Sbjct: 169 DALLATSLMRCYANRGDGDGARKLFDEMPVRDAVAWNVLITCYARNRRTKDALKLFEEMR 228
Query: 109 RDNVR--PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
+ P++VT + +L ACS LGAL+ G + +Y +H V +LI MY RCG
Sbjct: 229 GKDSESEPDDVTCILLLQACSSLGALDFGEQVWAYAEEHGYGGELKVRNSLITMYLRCGC 288
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+DKA +VF ++ V T+ ++I+GLA +G +A+ +F EMI + P + TF GVL+A
Sbjct: 289 VDKAYRVFSGTPQKSVVTWTAMISGLAANGFGNDAISVFEEMIRSDVAPDEQTFTGVLSA 348
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITN-MKIAPDH 285
CSH GLVD GF F M +YG++P + HYGCIVDL+ R G +EAY+F+TN MK+APD
Sbjct: 349 CSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYEFVTNEMKVAPDA 408
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
+ +LL AC+IHG + LGE++ L++ ++ +G YVLL N YA+ G+W + +IR M
Sbjct: 409 TIWRTLLGACRIHGHVDLGERVIGNLIELKAQQAGDYVLLLNTYAAVGEWSKVSEIRKLM 468
Query: 346 KEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVL 405
+E G+Q PGC+++E N +HEFI D HP++ +IY+ + E+ + +++ GY P+ L
Sbjct: 469 QEEGIQTTPGCTTVEHNGTVHEFIADDDAHPRKVEIYENLSEIYKQLRIAGYVPNVSSEL 528
Query: 406 HDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRK 465
HD++ KE AL HSE+LAI + L+ T + IR+ KNLRVC DCH+ K+ + I +R
Sbjct: 529 HDLDSEGKESALTYHSEKLAIAFALLVTPQHRPIRLAKNLRVCVDCHNFTKMFSAIYRRI 588
Query: 466 IIVRDRNRFHHFENGTCSCGDYW 488
+IVRDR RFHHF+ G CSC DYW
Sbjct: 589 VIVRDRTRFHHFQGGKCSCNDYW 611
>gi|15218900|ref|NP_176180.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806498|sp|Q0WQW5.2|PPR85_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g59720, mitochondrial; Flags: Precursor
gi|332195486|gb|AEE33607.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/503 (42%), Positives = 305/503 (60%), Gaps = 48/503 (9%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+++H Q++K G + L+ LYG CG C D+
Sbjct: 169 EGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCG--------------CLDL---------- 204
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
A +VF + + V W +MID LVR GE AL LFREMQR + P+ T+
Sbjct: 205 --------ARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQ 255
Query: 121 CVLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
VLSAC+ LG+L LG W H+++ + + ++ +V +LI MY +CG + A QVF+ M
Sbjct: 256 SVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGM 315
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN--QGIRPTKVTFVGVLNACSHGGLVDL 235
++RD+ ++N++I G A HGR+ EA+ F M++ + +RP VTFVG+L AC+H G V+
Sbjct: 316 QKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNK 375
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G + F M RDY IEP +EHYGCIVDL++R G EA D + +M + PD ++ SLL AC
Sbjct: 376 GRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDAC 435
Query: 296 -KIHGKLQLGEQIAKRLLDCRSAD-------SGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
K ++L E+IA+ ++ + + SG YVLLS YAS+ +W + +R M E
Sbjct: 436 CKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSE 495
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSP--STEVVL 405
G++KEPGCSSIE+N HEF GD HPQ +QIY++++ + ++ GY P S ++
Sbjct: 496 HGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLV 555
Query: 406 HDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRK 465
D KE++L +HSERLAI +GLI+ P T IR+ KNLRVCNDCH + KLI+ + +
Sbjct: 556 DATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTE 615
Query: 466 IIVRDRNRFHHFENGTCSCGDYW 488
IIVRDR RFHHF++G+CSC DYW
Sbjct: 616 IIVRDRVRFHHFKDGSCSCLDYW 638
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 148/362 (40%), Gaps = 62/362 (17%)
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRN-GEMARALDLFREM-QRDNVRPNEVTIVCVL 123
V AF VF ++ + W +I + A L+R+M +R P++ T VL
Sbjct: 99 VNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVL 158
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
AC+ + G+ +H + KH + V LI++Y CG +D A +VF+EM ER +
Sbjct: 159 KACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLV 218
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF------ 237
++NS+I L G A+++FREM + P T VL+AC+ G + LG
Sbjct: 219 SWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFL 277
Query: 238 --------------------------------EIFQSMTRDYGIEPQIEHYGCIVDLLSR 265
++FQ M + + + ++ +
Sbjct: 278 LRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKR-----DLASWNAMILGFAT 332
Query: 266 VGRPEEAYDFITNM-----KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD--CRSAD 318
GR EEA +F M + P+ + LL AC G + G Q ++ C
Sbjct: 333 HGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPA 392
Query: 319 SGTYVLLSNAYASSGKWKEAVQIRAKM---KEAGVQKE--PGC----SSIEVNNEIHEFI 369
Y + + A +G EA+ + M +A + + C +S+E++ EI I
Sbjct: 393 LEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNI 452
Query: 370 LG 371
+G
Sbjct: 453 IG 454
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 94/236 (39%), Gaps = 48/236 (20%)
Query: 155 GALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMH-GRSIEAVEMFREMINQG- 212
G ++ + S D++ A +VF+ ++ +N+LI A R EA ++R+M+ +G
Sbjct: 87 GKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGE 146
Query: 213 IRPTKVTFVGVLNACS-----------------HG------------------GLVDLGF 237
P K TF VL AC+ HG G +DL
Sbjct: 147 SSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLAR 206
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK--IAPDHIMLGSLLSAC 295
++F M E + + ++D L R G + A M+ PD + S+LSAC
Sbjct: 207 KVFDEMP-----ERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSAC 261
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNA----YASSGKWKEAVQIRAKMKE 347
G L LG LL D VL+ N+ Y G + A Q+ M++
Sbjct: 262 AGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQK 317
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/491 (40%), Positives = 299/491 (60%), Gaps = 5/491 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLK----LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMI 57
G+++H +LK L +R L L+ LY K G+ A ++F EMP D++ ++
Sbjct: 308 GKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMP-VKDIITWNTLL 366
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ YV G +E A F+++ K+ + WT MI GL +NG +AL LF +M+ D PN+
Sbjct: 367 SGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDY 426
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
++ACS LGALE GR +H+ + D VG A+I MY+RCG ++ A +F M
Sbjct: 427 AFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTM 486
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
D ++NS+IA L HG ++A+E++ +M+ +GI P + TF+ VL+ACSH GLV+ G
Sbjct: 487 PFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGN 546
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F SM +YGI P +HY ++DL R G+ +A + I +M + +LL+ C+
Sbjct: 547 RYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRT 606
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
HG + LG + A++L GTYVLLSN YAS G+W + + R M++ GV+KEP CS
Sbjct: 607 HGNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACS 666
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
EV N++H F++ D HP+ IY +++L +K GY P T+ VLHD+E KE+AL
Sbjct: 667 WTEVENKVHVFLVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYAL 726
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
+ HSE+LA+ +GL+ T+RV KNLR+C DCH+ IK ++ + R+I+VRD RFHHF
Sbjct: 727 STHSEKLAVAFGLMKLPQGATVRVFKNLRICGDCHNAIKFMSKVVGREIVVRDGKRFHHF 786
Query: 478 ENGTCSCGDYW 488
+NG CSC +YW
Sbjct: 787 KNGECSCRNYW 797
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 165/354 (46%), Gaps = 51/354 (14%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGE---------FKDAMQLFDEMPECNDVVAST 54
++HG V+K G+ + L+ +Y KC A +LFDEMP+ N+ + +T
Sbjct: 169 QMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTT 228
Query: 55 VMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP 114
+I YV +G + A E+ + + + W AMI G + +G AL LFR+M+ V+
Sbjct: 229 -LITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQV 287
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRI----DLNHIVGGALINMYSRCGDIDKA 170
+E T V+SAC+ G LG+ +H+Y+ K+ + D VG LI +Y + G +D A
Sbjct: 288 DESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGA 347
Query: 171 LQVFEEMKERDVTTYNSL-------------------------------IAGLAMHGRSI 199
++F EM +D+ T+N+L I+GLA +G
Sbjct: 348 RKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGE 407
Query: 200 EAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI 259
+A+++F +M G P F G + ACS G ++ G ++ + G + + +
Sbjct: 408 QALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVH-LGHDSTLSVGNAM 466
Query: 260 VDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG----KLQLGEQIAK 309
+ + +R G E A M D + S+++A HG ++L EQ+ K
Sbjct: 467 ITMYARCGIVEAARTMFLTMPFV-DPVSWNSMIAALGQHGHGVKAIELYEQMLK 519
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 188/398 (47%), Gaps = 55/398 (13%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
R +HG V+ G + +L+++Y K +F A +LFDE+P+ DV+A T +I Y
Sbjct: 32 ARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQ-PDVIARTTLITAYS 90
Query: 62 EHGLVENAFEVF--SRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
G ++ A E+F + + ++DTV + AMI G + A++LFR M+ N +P++ T
Sbjct: 91 ALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTF 150
Query: 120 VCVLSACSQLGALE--LGRWIHSYMGKHRIDLNHIVGGALINMYSRC------------- 164
VLSA + + E G+ +H + K I++ V AL+++Y +C
Sbjct: 151 ASVLSASTLIFYDERQCGQ-MHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMA 209
Query: 165 ---------------------------GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR 197
GD+ A ++ + M E+ +N++I+G HG
Sbjct: 210 SARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGL 269
Query: 198 SIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHY- 256
+A+ +FR+M G++ + T+ V++AC+ GG LG ++ + ++ + P +
Sbjct: 270 FEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKN-ELNPDRDFLL 328
Query: 257 ---GCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
++ L + G+ + A M + D I +LLS G+++ + ++ +
Sbjct: 329 SVGNTLITLYWKYGKVDGARKIFYEMPVK-DIITWNTLLSGYVNAGRMEEAKSFFAQMPE 387
Query: 314 CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
+ T+ ++ + A +G ++A+++ +MK G +
Sbjct: 388 ---KNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYE 422
>gi|414880744|tpg|DAA57875.1| TPA: hypothetical protein ZEAMMB73_657034, partial [Zea mays]
Length = 1822
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/483 (41%), Positives = 300/483 (62%), Gaps = 2/483 (0%)
Query: 6 HGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGL 65
HG ++ G ++ + ++ +Y G+ + F E+ C DVV T M+ G
Sbjct: 1342 HGAAVRWGHAADPHVQSGVLSMYAALGDVASSRAAFAEI-ACPDVVCVTAMVAALAAGGD 1400
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
V+ A ++F + +D V W+AMI G + G AL LF EM E T+V VL+A
Sbjct: 1401 VDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLSAGTTVGEATLVSVLTA 1460
Query: 126 CSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTY 185
C+Q+G L+ G+W+H Y+ + ++ +G AL++MYS+CG + A++VFE M ER+V T+
Sbjct: 1461 CAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVTAMEVFESMAERNVYTW 1520
Query: 186 NSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR 245
S ++GLAM+G E +++F+ M GI+P V+FV VL CS GLVD G F SM +
Sbjct: 1521 TSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCSMAGLVDEGRACFDSMDK 1580
Query: 246 DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGE 305
YG++P EHYGC+VDL R GR ++A FI +M + P + G+LL+A +IH + LG+
Sbjct: 1581 -YGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPMEPHEGVWGALLNASRIHNSVDLGK 1639
Query: 306 QIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEI 365
+LL S + +V LSN YA S WK ++R MK GV+K PG S+IEV+ ++
Sbjct: 1640 YALDKLLAIESENDAAHVQLSNIYAESQNWKGVSRVRGMMKAKGVKKVPGWSTIEVDGKV 1699
Query: 366 HEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLA 425
HEF +G HP+ +I + E+ + ++L+GY+ +T VL DIE+ EKE A+++HSE+LA
Sbjct: 1700 HEFYVGGRLHPRYNEIELMLAEMDRRLRLQGYTANTREVLFDIEEEEKEGAISLHSEKLA 1759
Query: 426 ICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCG 485
+ +GLI IR+VKNLRVC DCH IKL++ + R+I++RDRNRFHHF+ G CSC
Sbjct: 1760 LAFGLIVLPEDVEIRIVKNLRVCMDCHRYIKLVSKVFNREIVMRDRNRFHHFKGGECSCR 1819
Query: 486 DYW 488
DYW
Sbjct: 1820 DYW 1822
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 32/177 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H V G++ + LV++Y KCG AM++F+ M E
Sbjct: 1470 GKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVTAMEVFESMAE--------------- 1514
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ WT+ + GL NG L LF+ M+ ++PN V+ V
Sbjct: 1515 -----------------RNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVA 1557
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
VL CS G ++ GR M K+ +D G ++++Y R G +D A+ +M
Sbjct: 1558 VLRGCSMAGLVDEGRACFDSMDKYGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMP 1614
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/494 (41%), Positives = 297/494 (60%), Gaps = 7/494 (1%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKD------AMQLFDEMPECNDVVAST 54
E E LK+ T + ++ C D +L DE DV
Sbjct: 324 ESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMN 383
Query: 55 VMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP 114
+I+ Y + V+ A VF +K K V W AMI G +NG + AL+LF EMQ +++P
Sbjct: 384 SLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKP 443
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
+ T+V V++A + L +WIH + +D N V ALI+ +++CG I A ++F
Sbjct: 444 DSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLF 503
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
+ M+ER V T+N++I G +G EA+++F EM N ++P ++TF+ V+ ACSH GLV+
Sbjct: 504 DLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVE 563
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
G F+SM +YG+EP ++HYG +VDLL R GR ++A+ FI +M + P +LG++L A
Sbjct: 564 EGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGA 623
Query: 295 CKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
C+IH ++LGE+ A L D D G +VLL+N YAS+ W + ++R M++ G+QK P
Sbjct: 624 CRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTP 683
Query: 355 GCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKE 414
GCS +E+ NE+H F G HPQ ++IY ++ L +K GY P T + HD+E+ KE
Sbjct: 684 GCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKAAGYVPDTNSI-HDVEEDVKE 742
Query: 415 WALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRF 474
L+ HSERLAI +GL++T+ T I + KNLRVC DCH K I+ +T R+IIVRD RF
Sbjct: 743 QLLSSHSERLAIAFGLLNTRHGTAIHIRKNLRVCGDCHEATKYISLVTGREIIVRDLRRF 802
Query: 475 HHFENGTCSCGDYW 488
HHF+NG CSCGDYW
Sbjct: 803 HHFKNGICSCGDYW 816
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 179/383 (46%), Gaps = 52/383 (13%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GREIHG V+ G +SN +V LY KC +
Sbjct: 161 GREIHGMVITNGFQSNLFAMTAVVNLYAKCRQ---------------------------- 192
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+E+A+++F R+ +D V W ++ G +NG RA+ + +MQ +P+ +T+V
Sbjct: 193 ----IEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVS 248
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL A + L AL +GR IH Y + + V A+++ Y +CG + A VF+ M R+
Sbjct: 249 VLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRN 308
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++N++I G A +G S EA F +M+++G+ PT V+ +G L+AC++ G ++ G + +
Sbjct: 309 VVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHR 368
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK----IAPDHIMLGSLLSACKI 297
+ + I + ++ + S+ R + A N+K + + ++LG + C +
Sbjct: 369 -LLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGC-V 426
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYAS-----SGKWKEAVQIRAKMKE----- 347
+ L L ++ + DS T V + A A KW + IR M +
Sbjct: 427 NEALNLFCEMQSHDI---KPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVC 483
Query: 348 -AGVQKEPGCSSIEVNNEIHEFI 369
A + C +I+ ++ + +
Sbjct: 484 TALIDTHAKCGAIQTARKLFDLM 506
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 142/323 (43%), Gaps = 34/323 (10%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
L+EL E + L + N+ + T +I+ + + + A VF V+ K V
Sbjct: 50 LLELCTSLKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVL 109
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
+ M+ G +N + A+ + M+ D V P +L + L GR IH +
Sbjct: 110 YHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVI 169
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
+ N A++N+Y++C I+ A ++FE M +RD+ ++N+++AG A +G + AV+
Sbjct: 170 TNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQ 229
Query: 204 MFREMINQGIRPTKVTFVGVLNACS-----------HGGLVDLGFE----IFQSMTRDY- 247
+ +M G +P +T V VL A + HG GFE + +M Y
Sbjct: 230 VVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYF 289
Query: 248 -------------GIEPQ-IEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGS 290
G+ + + + ++D ++ G EEA+ M + P ++ +
Sbjct: 290 KCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMG 349
Query: 291 LLSACKIHGKLQLGEQIAKRLLD 313
L AC G L+ G + RLLD
Sbjct: 350 ALHACANLGDLERGRYV-HRLLD 371
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/487 (41%), Positives = 296/487 (60%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR IH QV++ GL ++ LV +Y CG
Sbjct: 566 GRRIHQQVIEAGLATDAHVANTLVNMYSMCGS---------------------------- 597
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
V++A +VF R+ +D V + AMI G + AL LF +Q + ++P++VT +
Sbjct: 598 ----VKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYIN 653
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+AC+ G+LE + IHS + K + +G AL++ Y++CG AL VF++M +R+
Sbjct: 654 MLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRN 713
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++N++I G A HGR + +++F M +GI+P VTFV +L+ACSH GL++ G F
Sbjct: 714 VISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFC 773
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM+RD+GI P IEHYGC+VDLL R G+ +E I M + + G+LL AC+IHG +
Sbjct: 774 SMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNV 833
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+ E+ A+ L ++ YV LS+ YA++G W A ++R M++ GV KEPG S IEV
Sbjct: 834 PVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEV 893
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+++H F+ D HP+ E+IY ++ +L +K+EGY P T V+HD+++ EKE A+ HS
Sbjct: 894 GDKLHYFVAEDRSHPESEKIYAELDKLTHAMKMEGYVPDTRSVMHDVDEGEKENAVCHHS 953
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ERLAI YGLIST P T IR+ KNLRVC DCH+ K I I R+I+ RD NRFHHF++G
Sbjct: 954 ERLAIAYGLISTLPGTPIRIFKNLRVCPDCHTATKFITKIVDREIVARDVNRFHHFKDGV 1013
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 1014 CSCGDYW 1020
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 174/338 (51%), Gaps = 35/338 (10%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GREIH +V+K G + S + L+ +Y +CG
Sbjct: 465 GREIHSRVVKDGFMFDISVQNALISMYARCGS---------------------------- 496
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+++A +F+++ KD + WTAMI GL ++G A AL +F++MQ+ ++PN VT
Sbjct: 497 ----IKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTS 552
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+ACS AL+ GR IH + + + + V L+NMYS CG + A QVF+ M +RD
Sbjct: 553 ILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRD 612
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ YN++I G A H EA+++F + +G++P KVT++ +LNAC++ G ++ EI
Sbjct: 613 IVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHS 672
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+ +D G +V ++ G +A M + + I +++ C HG+
Sbjct: 673 LVLKD-GYLSDTSLGNALVSTYAKCGSFSDALLVFDKM-MKRNVISWNAIIGGCAQHGRG 730
Query: 302 QLGEQIAKRL-LDCRSADSGTYVLLSNAYASSGKWKEA 338
Q Q+ +R+ ++ D T+V L +A + +G +E
Sbjct: 731 QDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEG 768
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 170/345 (49%), Gaps = 39/345 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H +L G S+ + LV++Y KCG +K +C
Sbjct: 364 GKTVHSHILNAGHESDLAVGTALVKMYAKCGSYK----------DCR------------- 400
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+VF ++ +D + W MI GL G A +++ +MQR+ + PN++T V
Sbjct: 401 ---------QVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVI 451
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+AC AL GR IHS + K + V ALI+MY+RCG I A +F +M +D
Sbjct: 452 LLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKD 511
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++ ++I GLA G EA+ +F++M G++P +VT+ +LNACS +D G I Q
Sbjct: 512 IISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQ 571
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIH 298
+ + G+ +V++ S G ++A +D +T I + M+G +
Sbjct: 572 QVI-EAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGK 630
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRA 343
L+L +++ + L D TY+ + NA A+SG + A +I +
Sbjct: 631 EALKLFDRLQEEGL---KPDKVTYINMLNACANSGSLEWAKEIHS 672
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 168/335 (50%), Gaps = 38/335 (11%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV + ++N Y + G + A EVF +++ K V WT +I G G A ++F++MQ
Sbjct: 278 DVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQ 337
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM--GKHRIDLNHIVGGALINMYSRCGD 166
++ V PN +T + VL+A S AL+ G+ +HS++ H DL VG AL+ MY++CG
Sbjct: 338 QEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDL--AVGTALVKMYAKCGS 395
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
QVFE++ RD+ +N++I GLA G EA E++ +M +G+ P K+T+V +LNA
Sbjct: 396 YKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNA 455
Query: 227 CSHGGLVDLGFEIFQSMTRD---YGIEPQ---------------------------IEHY 256
C + + G EI + +D + I Q I +
Sbjct: 456 CVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISW 515
Query: 257 GCIVDLLSRVGRPEEAYDFITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
++ L++ G EA +M+ A P+ + S+L+AC L G +I +++++
Sbjct: 516 TAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIE 575
Query: 314 CRSA-DSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
A D+ L N Y+ G K+A Q+ +M +
Sbjct: 576 AGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQ 610
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 161/333 (48%), Gaps = 36/333 (10%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVK-VKDTV-CWTAMIDGLVRNGEMARALDLFRE 106
D +IN Y++ G +E A +V++++ + TV W AM+ G V+ G + AL L RE
Sbjct: 175 DQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLRE 234
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
MQ+ + T + +LS+C ALE GR IH K R+ + V ++NMY++CG
Sbjct: 235 MQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGS 294
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
I +A +VF++M+ + V ++ +I G A G S A E+F++M +G+ P ++T++ VLNA
Sbjct: 295 IHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNA 354
Query: 227 CS-----------HGGLVDLGFE----IFQSMTRDYG---------------IEPQIEHY 256
S H +++ G E + ++ + Y + + +
Sbjct: 355 FSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAW 414
Query: 257 GCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL- 312
++ L+ G EEA + M+ + P+ I LL+AC L G +I R++
Sbjct: 415 NTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVK 474
Query: 313 DCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
D D L + YA G K+A + KM
Sbjct: 475 DGFMFDISVQNALISMYARCGSIKDARLLFNKM 507
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 130/285 (45%), Gaps = 40/285 (14%)
Query: 99 RALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALI 158
RA+D+ + +Q+ R N + +L C ++ L GR +H ++ +H L+ ALI
Sbjct: 124 RAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALI 183
Query: 159 NMYSRCGDIDKALQVFEEMK--ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPT 216
NMY +CG I++A QV+ ++ ER V ++N+++ G +G EA+++ REM G+
Sbjct: 184 NMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALG 243
Query: 217 KVTFVGVLNACSHGGLVDLGFEI-FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDF 275
+ T + +L++C ++ G EI ++M + + + CI+++ ++ G EA +
Sbjct: 244 RATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVAN--CILNMYAKCGSIHEAREV 301
Query: 276 ITNMK----------------------------------IAPDHIMLGSLLSACKIHGKL 301
M+ + P+ I ++L+A L
Sbjct: 302 FDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAAL 361
Query: 302 QLGEQIAKRLLDC-RSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
+ G+ + +L+ +D L YA G +K+ Q+ K+
Sbjct: 362 KWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKL 406
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/491 (40%), Positives = 304/491 (61%), Gaps = 5/491 (1%)
Query: 2 GREIHGQVLKLGLRSN----RSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMI 57
GR++H VL+ ++ + S L+ LY +CG+ +A ++FD+MP D+V+ ++
Sbjct: 293 GRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMP-VKDLVSWNAIL 351
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ V +E A +F + V+ + WT MI GL +NG L LF +M+ + + P +
Sbjct: 352 SGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDY 411
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+++CS LG+L+ G+ +HS + + D + VG ALI MYSRCG ++ A VF M
Sbjct: 412 AYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTM 471
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
D ++N++IA LA HG ++A++++ +M+ + I P ++TF+ +L+ACSH GLV G
Sbjct: 472 PYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGR 531
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F +M YGI P+ +HY ++DLL R G EA + +M P + +LL+ C I
Sbjct: 532 HYFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWI 591
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
HG ++LG Q A RLL+ GTY+ LSN YA+ G+W E ++R M+E GV+KEPGCS
Sbjct: 592 HGNMELGIQAADRLLELMPQQDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCS 651
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IEV N +H F++ D HP+ +Y+ +++L ++ GY P T+ VLHD+E +KE+AL
Sbjct: 652 WIEVENMVHVFLVDDAVHPEVHAVYRYLEQLVHEMRKLGYVPDTKFVLHDMESEQKEYAL 711
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
+ HSE+LA+ YG++ TIRV KNLR+C DCH+ K I+ + R+IIVRDR RFHHF
Sbjct: 712 STHSEKLAVVYGIMKLPLGATIRVFKNLRICGDCHNAFKYISKVVDREIIVRDRKRFHHF 771
Query: 478 ENGTCSCGDYW 488
NG CSC +YW
Sbjct: 772 RNGECSCSNYW 782
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 169/384 (44%), Gaps = 54/384 (14%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGE---------FKDAMQLFDEMPECN-DVVA 52
+++H +V K G S S L+ Y C A +LFDE P D A
Sbjct: 151 QQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAARKLFDEAPPGRRDEPA 210
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
T +I YV + + A E+ + V W AMI G V G A DL R M +
Sbjct: 211 WTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGI 270
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLN-HI---VGGALINMYSRCGDID 168
+ +E T V+SA S G +GR +H+Y+ + + + H V ALI +Y+RCG +
Sbjct: 271 QLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLV 330
Query: 169 KALQVFEEMKERDVTTYNS-------------------------------LIAGLAMHGR 197
+A +VF++M +D+ ++N+ +I+GLA +G
Sbjct: 331 EARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGF 390
Query: 198 SIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYG 257
E +++F +M +G+ P + G + +CS G +D G ++ S G + +
Sbjct: 391 GEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQL-HSQIIQLGHDSSLSVGN 449
Query: 258 CIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG----KLQLGEQIAKRLLD 313
++ + SR G E A M D + ++++A HG +QL E++ K +
Sbjct: 450 ALITMYSRCGLVEAADTVFLTMPYV-DSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDI- 507
Query: 314 CRSADSGTYVLLSNAYASSGKWKE 337
D T++ + +A + +G KE
Sbjct: 508 --LPDRITFLTILSACSHAGLVKE 529
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 177/401 (44%), Gaps = 57/401 (14%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
R +H +L G + +L++ Y K A LFD++P+ D+VA+T M++ Y
Sbjct: 15 ARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPK-PDIVAATTMLSAYS 73
Query: 62 EHGLVENAFEVF--SRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
G ++ A ++F + + ++DTV + AMI + + AL LF +M+R P+ T
Sbjct: 74 AAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTF 133
Query: 120 VCVLSA----------CSQL-------GALELGRWIHS------------------YMGK 144
VL A C QL GAL + +++ M
Sbjct: 134 SSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAA 193
Query: 145 HRIDLNHIVGG--------ALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHG 196
R + G +I Y R D+ A ++ E M + +N++I+G G
Sbjct: 194 ARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRG 253
Query: 197 RSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHY 256
EA ++ R M + GI+ + T+ V++A S+ GL ++G ++ + R ++P H+
Sbjct: 254 FYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTV-VQPS-GHF 311
Query: 257 -----GCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
++ L +R G+ EA M + D + ++LS C +++ I R
Sbjct: 312 VLSVNNALITLYTRCGKLVEARRVFDKMPVK-DLVSWNAILSGCVNARRIEEANSIF-RE 369
Query: 312 LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
+ RS T+ ++ + A +G +E +++ +MK G++
Sbjct: 370 MPVRSLL--TWTVMISGLAQNGFGEEGLKLFNQMKLEGLEP 408
>gi|296084925|emb|CBI28334.3| unnamed protein product [Vitis vinifera]
Length = 604
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/491 (43%), Positives = 309/491 (62%), Gaps = 16/491 (3%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR++HGQVLK L + +V +Y GE + A ++FD MP DVV+ MI Y
Sbjct: 127 EGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPN-RDVVSWNSMIAGY 185
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++ G +E A E+F + +D V AMIDG +EM +RP+ IV
Sbjct: 186 LKAGEIELASELFDEMPERDLVSCNAMIDGYG------------KEMLSLGLRPDGPAIV 233
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNH-IVGGALINMYSRCGDIDKALQVFEEMKE 179
VLSA + LG +E G+W+H+Y+ ++I+L+ +G ALI+MYS+CG I+ A VF +
Sbjct: 234 SVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISH 293
Query: 180 -RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
R++ +NS+I+GLA+HG + EA+++F EM I P ++TF+G+L+ CSHGGLV+ G
Sbjct: 294 RRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQF 353
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
F+SM Y I P+I+HYGC++DL R GR E+A I NM D + ++LSA H
Sbjct: 354 YFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKH 413
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
G +++G+ A R ++ DS +YVLLSN YA +G+W + +IR M++ GV+K GCSS
Sbjct: 414 GHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSS 473
Query: 359 IEVNNEIHEFILG-DIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
+ VN ++HEF+LG ++ Q+ K+ E+ +KL+GY P VL DIED KE L
Sbjct: 474 MLVNGKVHEFLLGKELDSSYSGQVLAKIAEVVSRLKLQGYEPDLTQVLLDIEDEGKESLL 533
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
+HSE++AI +GLI I +VKNLRVC DCH +KL++ + R+II+RD+NRFHHF
Sbjct: 534 NLHSEKMAIAFGLIHINKSAPIHIVKNLRVCCDCHCFMKLVSKVYNRQIIMRDQNRFHHF 593
Query: 478 ENGTCSCGDYW 488
ENG CSC +YW
Sbjct: 594 ENGCCSCNEYW 604
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 138/306 (45%), Gaps = 33/306 (10%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECN----DVVASTVMINCYVE--HGLVENAFEVFSRVK 77
+V + KC + Q+ +M + N S ++ C + G ++ A VFSR++
Sbjct: 9 VVSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQ 68
Query: 78 VKDTVCWTAMIDGLVRNGEMARALDLFREMQR--DNVRPNEVTIVCVLSACSQLGALELG 135
++ + A+I G +L L+ M + E +I VL AC +L A + G
Sbjct: 69 HPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKLLAFDEG 128
Query: 136 RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMH 195
R +H + K + + VG +++ MY G+I+ A +VF+ M RDV ++NS+IAG
Sbjct: 129 RQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKA 188
Query: 196 GRSIEAVEMF-------------------REMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
G A E+F +EM++ G+RP V VL+A + G V+ G
Sbjct: 189 GEIELASELFDEMPERDLVSCNAMIDGYGKEMLSLGLRPDGPAIVSVLSAIADLGFVEEG 248
Query: 237 --FEIFQSMTRDYGIEPQIEHYG-CIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLS 293
+ SM + IE G ++D+ S+ G E AY ++ + S++S
Sbjct: 249 KWLHAYVSMNK---IELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMIS 305
Query: 294 ACKIHG 299
IHG
Sbjct: 306 GLAIHG 311
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/487 (42%), Positives = 290/487 (59%), Gaps = 33/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+IH K G SN LV++Y +CG +AM
Sbjct: 194 GRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAML---------------------- 231
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
VF ++ K+ V W A+I G R GE AL LF MQR+ RP E T
Sbjct: 232 ----------VFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSA 281
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+LS+CS +G LE G+W+H+++ K L VG L++MY++ G I A +VF+++ + D
Sbjct: 282 LLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVD 341
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V + NS++ G A HG EA + F EMI GI P +TF+ VL ACSH L+D G F
Sbjct: 342 VVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFG 401
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M R Y IEP++ HY IVDLL R G ++A FI M I P + G+LL A K+H
Sbjct: 402 LM-RKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNT 460
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++G A+R+ + + GT+ LL+N YAS+G+W++ ++R MK++GV+KEP CS +EV
Sbjct: 461 EMGAYAAQRVFELDPSYPGTHTLLANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEV 520
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N +H F+ D+ HPQ+E+I+K ++L Q +K GY P T VL ++ EKE L HS
Sbjct: 521 ENSVHVFVANDVAHPQKEKIHKMWEKLNQKIKEIGYVPDTSHVLLFVDQQEKELNLQYHS 580
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ + L++T P +TIR++KN+RVC DCHS IK ++ + KR+IIVRD NRFHHF +G
Sbjct: 581 EKLALSFALLNTPPGSTIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFCDGF 640
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 641 CSCGDYW 647
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 107/189 (56%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D+V ++ Y G +E A +F + +D V WT+MI G +N + AL LF M
Sbjct: 107 HDLVIQNSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRM 166
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
D PNE T+ ++ C + + GR IH+ K+ N VG +L++MY+RCG +
Sbjct: 167 LSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYL 226
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+A+ VF+++ ++ ++N+LIAG A G EA+ +F M +G RPT+ T+ +L++C
Sbjct: 227 GEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSC 286
Query: 228 SHGGLVDLG 236
S G ++ G
Sbjct: 287 SSMGCLEQG 295
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 122/276 (44%), Gaps = 38/276 (13%)
Query: 111 NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
++ P+ +L C+QLG L+ G+ +H ++ + ++ +L+ MY+RCG ++ A
Sbjct: 69 SLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGA 128
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
++F+EM RD+ ++ S+I G A + R+ +A+ +F M++ G P + T ++ C +
Sbjct: 129 RRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYM 188
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRV------------------------ 266
+ G +I + YG + +VD+ +R
Sbjct: 189 ASYNCGRQI-HACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNAL 247
Query: 267 -------GRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRS 316
G EEA M+ P +LLS+C G L+ G+ + L+
Sbjct: 248 IAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQ 307
Query: 317 ADSGTYV--LLSNAYASSGKWKEAVQIRAKMKEAGV 350
G YV L + YA SG ++A ++ K+ + V
Sbjct: 308 KLVG-YVGNTLLHMYAKSGSIRDAEKVFDKLVKVDV 342
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 33/196 (16%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ +H ++K + L+ +Y K G +DA ++FD++ + DVV+ M+ Y
Sbjct: 294 QGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKV-DVVSCNSMLIGY 352
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+HGL + A + F EM R + PN++T +
Sbjct: 353 AQHGLGKEAAQQFD-------------------------------EMIRFGIEPNDITFL 381
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VL+ACS L+ G+ M K+ I+ ++++ R G +D+A EEM E
Sbjct: 382 SVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIE 441
Query: 180 RDVTTYNSLIAGLAMH 195
V + +L+ MH
Sbjct: 442 PTVAIWGALLGASKMH 457
>gi|242081563|ref|XP_002445550.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
gi|241941900|gb|EES15045.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
Length = 595
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/443 (43%), Positives = 283/443 (63%), Gaps = 3/443 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D + +T ++ CY G + A ++F + +D V W +I RN AL LF EM+
Sbjct: 153 DALLATSLMACYANRGDGDGARKLFGEMPARDAVAWNVLISCCARNRRTKDALKLFEEMR 212
Query: 109 -RDN-VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
RD+ P++VT + +L AC+ LGAL+ G + +Y +H V +LI MYSRCG
Sbjct: 213 GRDSGAEPDDVTCILLLQACTSLGALDFGEQVWAYAEEHGYGAKLKVRNSLIAMYSRCGC 272
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+DKA +VF ++ V T++++I+GLA +G +A+ F EMI + P + TF GVL+A
Sbjct: 273 VDKAYRVFCGTPQKSVVTWSAMISGLAANGFGDDAISAFEEMIRSDVAPDEQTFTGVLSA 332
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITN-MKIAPDH 285
CSH GLVD GF F M +YG++P + HYGCIVDL+ R G +EAY+ +TN MK+APD
Sbjct: 333 CSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYELVTNEMKVAPDA 392
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
+ +LL AC+IHG + LGE++ L++ ++ +G YVLL N YA+ G+W + ++R M
Sbjct: 393 TIWRTLLGACRIHGHVDLGERVISNLIELKAQQAGDYVLLLNTYAAVGEWSKVSEVRKLM 452
Query: 346 KEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVL 405
+E G+Q PGC+++E N E++EFI D HP++ +IY+K+ E+ + +++ GY P+ L
Sbjct: 453 QEKGIQTTPGCTTVEHNGEVYEFIADDDAHPRKVEIYEKLNEINKQLRIAGYVPNVSSEL 512
Query: 406 HDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRK 465
HD++ KE AL HSE+LAI + L+ T IR+ KNLRVC DCH+ K+ + I R
Sbjct: 513 HDLDSEGKESALTYHSEKLAIAFALLVTPQNRPIRLAKNLRVCVDCHNFTKVFSGIYNRL 572
Query: 466 IIVRDRNRFHHFENGTCSCGDYW 488
+IVRDR RFHHF+ G CSC DYW
Sbjct: 573 VIVRDRTRFHHFQGGKCSCNDYW 595
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/489 (41%), Positives = 300/489 (61%), Gaps = 2/489 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN-DVVASTVMINCY 60
G+++H +L+ + N L+ Y K G ++A ++ D+ E + +V++ T ++ Y
Sbjct: 210 GKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGY 269
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V+ G +E+A E+F + +D V WTAMI G +NG A+DLFR M PN T+
Sbjct: 270 VKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLA 329
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLS C+ L L+ G+ IH + ++ + V A+I MY+R G A ++F+++ R
Sbjct: 330 AVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWR 389
Query: 181 DVT-TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
T T+ S+I LA HG+ EAV +F EM+ G+ P ++T+VGVL+ACSH G V+ G
Sbjct: 390 KETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRY 449
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+ + ++ I P++ HY C+VDLL+R G EA +FI M + PD I GSLLSAC++H
Sbjct: 450 YDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHK 509
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+L E A++LL +SG Y ++N Y++ G+W +A +I KE V+KE G S
Sbjct: 510 NAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWT 569
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
+ ++IH F D+ HPQR+ +Y + + +K G+ P + VLHD++D KE L+
Sbjct: 570 HIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSR 629
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GLIST TT+RV+KNLRVCNDCH+ IK I+ +T R+IIVRD RFHHF +
Sbjct: 630 HSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRD 689
Query: 480 GTCSCGDYW 488
G CSC DYW
Sbjct: 690 GLCSCKDYW 698
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 156/333 (46%), Gaps = 36/333 (10%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H V+KLGL S ++ +YGKCG+ + A +F+ MP V + M++
Sbjct: 77 GRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP-VRSVSSWNAMVSLNT 135
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLF-REMQRDNVRPNEVTIV 120
G ++ A +F + + V W AMI G +NG A+AL LF R + ++ P+E TI
Sbjct: 136 HLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTIT 195
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC---------------- 164
VLSAC+ LG + +G+ +H+Y+ + + N V ALI+ Y++
Sbjct: 196 SVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMET 255
Query: 165 -----------------GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
GD++ A ++F M RDV + ++I G +GR+ EA+++FR
Sbjct: 256 DLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRS 315
Query: 208 MINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
MI G P T VL+ C+ +D G +I R +E I+ + +R G
Sbjct: 316 MITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSL-LEQSSSVSNAIITMYARSG 374
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
A + + I S++ A HG+
Sbjct: 375 SFPWARRMFDQVCWRKETITWTSMIVALAQHGQ 407
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 130/283 (45%), Gaps = 37/283 (13%)
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
+ + G + +A VF+ + +D V WT M+ GL R G A+ +M D P + T+
Sbjct: 2 FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTL 61
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
VLS+C+ A +GR +HS++ K + V +++NMY +CGD + A VFE M
Sbjct: 62 TNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPV 121
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
R V+++N++++ GR A +F M ++ I V++ ++ + GL ++
Sbjct: 122 RSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSI----VSWNAMIAGYNQNGLDAKALKL 177
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F M + +APD + S+LSAC G
Sbjct: 178 FSRMLHES--------------------------------SMAPDEFTITSVLSACANLG 205
Query: 300 KLQLGEQIAKRLLDCRSA-DSGTYVLLSNAYASSGKWKEAVQI 341
+++G+Q+ +L A +S L + YA SG + A +I
Sbjct: 206 NVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRI 248
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/487 (40%), Positives = 285/487 (58%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIHG +++ L + L++LYGKCG +A
Sbjct: 239 GKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARG---------------------- 276
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+F ++K +D V WT MI +G LFR++ + VRPNE T
Sbjct: 277 ----------IFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAG 326
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL+AC+ A LG+ +H YM D AL++MYS+CG+ A +VF EM + D
Sbjct: 327 VLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPD 386
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++ SLI G A +G+ EA+ F ++ G +P +VT+VGVL+AC+H GLVD G E F
Sbjct: 387 LVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFH 446
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
S+ +G+ +HY C++DLL+R GR +EA + I NM + PD + SLL C+IHG L
Sbjct: 447 SIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNL 506
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+L ++ AK L + + TY+ L+N YA++G W E +R M G+ K+PG S IE+
Sbjct: 507 ELAKRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPGKSWIEI 566
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
++H F++GD HP+ I++ + EL + +K EGY P T VLHD+E+ +KE L HS
Sbjct: 567 KRQVHVFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEEEQKEQNLVYHS 626
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ +G+IST P T I+V KNLR C DCH+ IK I+ I +RKI VRD NRFH FE+G+
Sbjct: 627 EKLAVVFGIISTPPGTPIKVFKNLRTCVDCHTAIKYISKIVQRKITVRDSNRFHCFEDGS 686
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 687 CSCKDYW 693
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 211/450 (46%), Gaps = 65/450 (14%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H +L+++Y KCG DA LFDEM D+ + MI Y
Sbjct: 106 GRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGH-RDLCSWNTMIVGYA 164
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR-DNVRPNEVTIV 120
+ G +E A ++F + +D W A I G V + + AL+LFR MQR + N+ T+
Sbjct: 165 KLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLS 224
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
L+A + + L LG+ IH Y+ + ++L+ +V AL+++Y +CG +D+A +F++MK+R
Sbjct: 225 SALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDR 284
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------H 229
DV ++ ++I GR E +FR+++ G+RP + TF GVLNAC+ H
Sbjct: 285 DVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVH 344
Query: 230 GGLVDLGFE------------------------IFQSMTRDYGIEPQIEHYGCIVDLLSR 265
G ++ G++ +F M +P + + ++ ++
Sbjct: 345 GYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMH-----QPDLVSWTSLIVGYAQ 399
Query: 266 VGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLG----EQIAKRLLDCRSAD 318
G+P+EA ++ + PD + +LSAC G + G I ++ +AD
Sbjct: 400 NGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTAD 459
Query: 319 SGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQR 378
Y + + A SG++KEA I M ++ + + +LG R
Sbjct: 460 H--YACVIDLLARSGRFKEAENIIDNM------------PVKPDKFLWASLLGGCRIHGN 505
Query: 379 EQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
++ K+ K + ++E +P+T + L +I
Sbjct: 506 LELAKRAA--KALYEIEPENPATYITLANI 533
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 88 IDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRI 147
+D L + + A++L + R + RP+ +++AC + ALELGR +H++
Sbjct: 62 VDVLCQQKRVKEAVEL---LHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNF 118
Query: 148 DLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
+ L++MY++CG + A +F+EM RD+ ++N++I G A GR +A ++F E
Sbjct: 119 VPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDE 178
Query: 208 M 208
M
Sbjct: 179 M 179
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/489 (41%), Positives = 300/489 (61%), Gaps = 2/489 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN-DVVASTVMINCY 60
G+++H +L+ + N L+ Y K G ++A ++ D+ E + +V++ T ++ Y
Sbjct: 316 GKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGY 375
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V+ G +E+A E+F + +D V WTAMI G +NG A+DLFR M PN T+
Sbjct: 376 VKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLA 435
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLS C+ L L+ G+ IH + ++ + V A+I MY+R G A ++F+++ R
Sbjct: 436 AVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWR 495
Query: 181 DVT-TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
T T+ S+I LA HG+ EAV +F EM+ G+ P ++T+VGVL+ACSH G V+ G
Sbjct: 496 KETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRY 555
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+ + ++ I P++ HY C+VDLL+R G EA +FI M + PD I GSLLSAC++H
Sbjct: 556 YDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHK 615
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+L E A++LL +SG Y ++N Y++ G+W +A +I KE V+KE G S
Sbjct: 616 NAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWT 675
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
+ ++IH F D+ HPQR+ +Y + + +K G+ P + VLHD++D KE L+
Sbjct: 676 HIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSR 735
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GLIST TT+RV+KNLRVCNDCH+ IK I+ +T R+IIVRD RFHHF +
Sbjct: 736 HSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRD 795
Query: 480 GTCSCGDYW 488
G CSC DYW
Sbjct: 796 GLCSCKDYW 804
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 162/346 (46%), Gaps = 42/346 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGK----CGEFKDAMQLFDEMPECN-DVVASTVM 56
GR IH + +K GL ++ L+ YG+ G +DA +LFDE+P +V +
Sbjct: 45 GRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNSL 104
Query: 57 INCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
++ + + G + +A VF+ + +D V WT M+ GL R G A+ +M D P +
Sbjct: 105 LSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQ 164
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
T+ VLS+C+ A +GR +HS++ K + V +++NMY +CGD + A VFE
Sbjct: 165 FTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFER 224
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
M R V+++N++++ GR A +F M ++ I V++ ++ + GL
Sbjct: 225 MPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSI----VSWNAMIAGYNQNGLDAKA 280
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
++F M + +APD + S+LSAC
Sbjct: 281 LKLFSRMLHES--------------------------------SMAPDEFTITSVLSACA 308
Query: 297 IHGKLQLGEQIAKRLLDCRSA-DSGTYVLLSNAYASSGKWKEAVQI 341
G +++G+Q+ +L A +S L + YA SG + A +I
Sbjct: 309 NLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRI 354
>gi|356532565|ref|XP_003534842.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g50990-like [Glycine max]
Length = 569
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/483 (42%), Positives = 302/483 (62%), Gaps = 6/483 (1%)
Query: 6 HGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGL 65
H +V+ LG + S L+ Y +C A+ +F + D+ + ++I V+ G
Sbjct: 93 HARVVVLGFATYPSLVASLISTYAQCHRPHIALHVFSRIL---DLFSMNLVIESLVKGGQ 149
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
+ A +VF ++ V+D V W +MI G VRN AL +FR M V P+ T V++A
Sbjct: 150 CDIAKKVFGKMSVRDVVTWNSMIGGYVRNLRFFDALSIFRRMLSAKVEPDGFTFASVVTA 209
Query: 126 CSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTY 185
C++LGAL +W+H M + R++LN+I+ ALI+MY++CG ID + QVFEE+ V+ +
Sbjct: 210 CARLGALGNAKWVHGLMVEKRVELNYILSAALIDMYAKCGRIDVSRQVFEEVARDHVSVW 269
Query: 186 NSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR 245
N++I+GLA+HG +++A +F M + + P +TF+G+L ACSH GLV+ G + F M
Sbjct: 270 NAMISGLAIHGLAMDATLVFSRMEMEHVLPDSITFIGILTACSHCGLVEEGRKYFGMMQN 329
Query: 246 DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGE 305
+ I+PQ+EHYG +VDLL R G EEAY I M++ PD ++ +LLSAC+IH K +LGE
Sbjct: 330 RFMIQPQLEHYGTMVDLLGRAGLMEEAYAVIKEMRMEPDIVIWRALLSACRIHRKKELGE 389
Query: 306 QIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEI 365
+ + +SG +VLLSN Y S W A ++R MK GV+K G S +E+ + I
Sbjct: 390 V---AIANISRLESGDFVLLSNMYCSLNNWDGAERVRRMMKTRGVRKSRGKSWVELGDGI 446
Query: 366 HEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLA 425
H+F HP+ + IY+ ++ L Q KLEG++P T++VL D+ + EKE L HSE+LA
Sbjct: 447 HQFNAAYQSHPEMKSIYRVLEGLIQRAKLEGFTPLTDLVLMDVSEEEKEENLMFHSEKLA 506
Query: 426 ICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCG 485
+ Y ++ T P T IR+ KNLR+C DCH+ IK+++ I RKIIVRDR RFH FE G CSC
Sbjct: 507 MAYAVLKTSPGTKIRISKNLRICLDCHNWIKIVSKILNRKIIVRDRIRFHQFEGGVCSCK 566
Query: 486 DYW 488
DYW
Sbjct: 567 DYW 569
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 38/198 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
+ +HG +++ + N L+++Y KCG + Q+F+E+ + V MI+
Sbjct: 219 AKWVHGLMVEKRVELNYILSAALIDMYAKCGRIDVSRQVFEEVAR-DHVSVWNAMISGLA 277
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HGL +A VFSR M+ ++V P+ +T +
Sbjct: 278 IHGLAMDATLVFSR-------------------------------MEMEHVLPDSITFIG 306
Query: 122 VLSACSQLGALELGRWIHSYMGKHRI---DLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
+L+ACS G +E GR M + L H G ++++ R G +++A V +EM+
Sbjct: 307 ILTACSHCGLVEEGRKYFGMMQNRFMIQPQLEHY--GTMVDLLGRAGLMEEAYAVIKEMR 364
Query: 179 -ERDVTTYNSLIAGLAMH 195
E D+ + +L++ +H
Sbjct: 365 MEPDIVIWRALLSACRIH 382
>gi|22328607|ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635650|sp|O23266.3|PP308_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14050, mitochondrial; Flags: Precursor
gi|332657965|gb|AEE83365.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/490 (40%), Positives = 307/490 (62%), Gaps = 4/490 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H + ++ + LV++Y KCG A +FD + + ++ T M++ Y
Sbjct: 124 GRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSI-RVKNTISWTAMVSGYA 182
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR-PNEVTIV 120
+ G E A E+F + VK+ WTA+I G V++G+ A +F EM+R+ V + + +
Sbjct: 183 KSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLS 242
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
++ AC+ L A GR +H + D + ALI+MY++C D+ A +F M+ R
Sbjct: 243 SIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHR 302
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++ SLI G+A HG++ +A+ ++ +M++ G++P +VTFVG++ ACSH G V+ G E+F
Sbjct: 303 DVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELF 362
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
QSMT+DYGI P ++HY C++DLL R G +EA + I M PD +LLSACK G+
Sbjct: 363 QSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGR 422
Query: 301 LQLGEQIAKRLLDC-RSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
Q+G +IA L+ + D TY+LLSN YAS+ W + + R K+ E V+K+PG SS+
Sbjct: 423 GQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSV 482
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKL-EGYSPSTEVVLHDIEDWEKEWALA 418
EV E F G+ HP +E I++ +++L++ +++ GY P T +LHD+++ EKE L
Sbjct: 483 EVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLF 542
Query: 419 IHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFE 478
HSER A+ YGL+ P T IR+VKNLRVC DCH ++K I+ IT+R+IIVRD R+HHF+
Sbjct: 543 WHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFK 602
Query: 479 NGTCSCGDYW 488
G CSC D+W
Sbjct: 603 GGKCSCNDFW 612
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 112/248 (45%), Gaps = 41/248 (16%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
+ +H ++KLG+ LV +YGKCG A+Q+FDEMP
Sbjct: 22 AKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPH--------------- 66
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARAL-DLFREMQRDNVRPNEVTIV 120
+D + W +++ L + + L +RP++
Sbjct: 67 -----------------RDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFS 109
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
++ AC+ LG+++ GR +H + + +V +L++MY++CG ++ A VF+ ++ +
Sbjct: 110 ALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVK 169
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTK--VTFVGVLNACSHGGLVDLGFE 238
+ ++ ++++G A GR EA+E+FR I P K ++ +++ G F
Sbjct: 170 NTISWTAMVSGYAKSGRKEEALELFR------ILPVKNLYSWTALISGFVQSGKGLEAFS 223
Query: 239 IFQSMTRD 246
+F M R+
Sbjct: 224 VFTEMRRE 231
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 109/228 (47%), Gaps = 12/228 (5%)
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L C++ L + +H+++ K I + L+N+Y +CG ALQVF+EM RD
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 183 TTYNSLIAGL---AMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+ S++ L + G+++ + G+RP F ++ AC++ G +D G ++
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSS--VGSSSGLRPDDFVFSALVKACANLGSIDHGRQV 127
Query: 240 F-QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
+ +Y + ++ +VD+ ++ G A ++++ + I +++S
Sbjct: 128 HCHFIVSEYANDEVVK--SSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSGYAKS 184
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
G+ + ++ R+L ++ S T ++ + + SGK EA + +M+
Sbjct: 185 GRKEEALELF-RILPVKNLYSWTALI--SGFVQSGKGLEAFSVFTEMR 229
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 188/440 (42%), Positives = 289/440 (65%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D+ + +++ Y++ G +E+A +F+ + D V WT MI G V NG+ AL + M+
Sbjct: 1143 DLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMR 1202
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
V+P+E T ++ ACS L ALE GR IH+ K + V +L++MY++CG+I+
Sbjct: 1203 LSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIE 1262
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +F+ + ++N++I GLA HG + EA++ F EM ++G+ P +VTF+GVL+ACS
Sbjct: 1263 DARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACS 1322
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLV +E F SM + YGIEP+IEHY C+VD LSR GR EA I++M M
Sbjct: 1323 HSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASASMY 1382
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+LL+AC++ + G+++A++LL +DS YVLLSN YA++ +W+ R M++A
Sbjct: 1383 RTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKA 1442
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
V+K+PG S +++ N++H F+ GD H + + IY K++ + + ++ EGY P T+ L D+
Sbjct: 1443 NVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYLPDTDFALVDV 1502
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
E+ +KE +L HSE+LAI YGL+ T P TT+RV+KNLRVC DCH+ IK I+ + +R++++
Sbjct: 1503 EEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISKVFEREVVL 1562
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD NRFHHF +G CSCGDYW
Sbjct: 1563 RDANRFHHFRSGVCSCGDYW 1582
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 175/399 (43%), Gaps = 62/399 (15%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
+HG +K+GL+ + LV +Y K G ++A LFD M DVV VM+ YV+ G
Sbjct: 749 LHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGM-GLRDVVLWNVMMKAYVDTG 807
Query: 65 LVENAFEVFSR-------------------VKVK-------------------------- 79
L A +FS VK K
Sbjct: 808 LEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQLKQLKAYGTKLFMYDDDDD 867
Query: 80 --DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRW 137
D + W + ++ GE A+D F +M V + +T V +LS + L LELG+
Sbjct: 868 GSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQ 927
Query: 138 IHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR 197
IH + + +D VG LINMY + G + +A VF +M E D+ ++N++I+G A+ G
Sbjct: 928 IHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGL 987
Query: 198 SIEAVEMFREMINQGIRPTKVTFVGVLNACSH-GGLVDLGFEIFQSMTRDYGIEPQIEHY 256
+V MF +++ G+ P + T VL ACS GG L +I + G+
Sbjct: 988 EECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQI-HACAMKAGVVLDSFVS 1046
Query: 257 GCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGE-QIAKRL--LD 313
++D+ S+ G+ EEA N D L S +HG + G+ A RL L
Sbjct: 1047 TTLIDVYSKSGKMEEAEFLFVNQ----DGFDLASW--NAMMHGYIVSGDFPKALRLYILM 1100
Query: 314 CRSADSGTYVLLSNAYASSG---KWKEAVQIRAKMKEAG 349
S + + L+NA ++G K+ QI+A + + G
Sbjct: 1101 QESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRG 1139
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 173/402 (43%), Gaps = 49/402 (12%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D ST +I+ Y + G +E A +F D W AM+ G + +G+ +AL L+ MQ
Sbjct: 1042 DSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQ 1101
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
R N++T+ A L L+ G+ I + + K +L+ V +++MY +CG+++
Sbjct: 1102 ESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEME 1161
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A ++F E+ D + ++I+G +G+ A+ + M ++P + TF ++ ACS
Sbjct: 1162 SARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACS 1221
Query: 229 -----------HGGLVDL--GFEIF--QSMTRDYG----IE-----------PQIEHYGC 258
H V L F+ F S+ Y IE +I +
Sbjct: 1222 LLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNA 1281
Query: 259 IVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR 315
++ L++ G EEA F MK + PD + +LSAC G + + +
Sbjct: 1282 MIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIY 1341
Query: 316 SADSGT--YVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDI 373
+ Y L +A + +G+ +EA ++ + M E + ++ +L
Sbjct: 1342 GIEPEIEHYSCLVDALSRAGRIREAEKVISSMP------------FEASASMYRTLLNAC 1389
Query: 374 RHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
R + K++ E +++ LE + V+L ++ +W
Sbjct: 1390 RVQVDRETGKRVAE--KLLALEPSDSAAYVLLSNVYAAANQW 1429
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 155/372 (41%), Gaps = 53/372 (14%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+IN YV+ G V A VF ++ D V W MI G +G ++ +F ++ R + P+
Sbjct: 947 LINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPD 1006
Query: 116 EVTIVCVLSACSQL-GALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
+ T+ VL ACS L G L IH+ K + L+ V LI++YS+ G +++A +F
Sbjct: 1007 QFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLF 1066
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
D+ ++N+++ G + G +A+ ++ M G R ++T A GGLV
Sbjct: 1067 VNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAA--GGLVG 1124
Query: 235 L--GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA-------------------- 272
L G +I Q++ G + ++D+ + G E A
Sbjct: 1125 LKQGKQI-QAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMIS 1183
Query: 273 --------------YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSA- 317
Y + K+ PD +L+ AC + L+ G QI + A
Sbjct: 1184 GCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAF 1243
Query: 318 DSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQ 377
D L + YA G ++A G+ K S I N + I+G +H
Sbjct: 1244 DPFVMTSLVDMYAKCGNIEDA---------RGLFKRTNTSRIASWNAM---IVGLAQHGN 1291
Query: 378 REQIYKKMQELK 389
E+ + +E+K
Sbjct: 1292 AEEALQFFEEMK 1303
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 91/220 (41%), Gaps = 34/220 (15%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ H ++L G +R L+ +Y KCG A +LFD P+ +
Sbjct: 645 GKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTS------------- 691
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMAR-ALDLFREMQRDNVRPNEVTIV 120
+D V W A++ + + AR LFR ++R V T+
Sbjct: 692 -----------------RDLVTWNAILSA---HADKARDGFHLFRLLRRSFVSATRHTLA 731
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V C + +H Y K + + V GAL+N+Y++ G I +A +F+ M R
Sbjct: 732 PVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLR 791
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTF 220
DV +N ++ G EA+ +F E G+RP VT
Sbjct: 792 DVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTL 831
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/527 (38%), Positives = 320/527 (60%), Gaps = 40/527 (7%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMP-----ECNDVVAS-- 53
+GR+IH KLG + N L+ +Y + G A LFD+MP N +++
Sbjct: 133 DGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLI 192
Query: 54 -------------------------------TVMINCYVEHGLVENAFEVFSRVKVKDTV 82
V ++ Y + GL+++A +VF + VKD +
Sbjct: 193 QNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVI 252
Query: 83 CWTAMIDGLVRNGEMARALDLFREMQR-DNVRPNEVTIVCVLSACSQLGALELGRWIHSY 141
W +I G +NG + A+++++ M+ + PN+ T V +L A + +GAL+ G IH
Sbjct: 253 SWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGR 312
Query: 142 MGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEA 201
+ K + L+ V LI++Y +CG + A+ +F ++ + T+N++I+ +HG + +
Sbjct: 313 VIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKT 372
Query: 202 VEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVD 261
+++F EM+++G++P VTFV +L+ACSH G V+ G F+ M ++YGI+P ++HYGC+VD
Sbjct: 373 LKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCMVD 431
Query: 262 LLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT 321
LL R G E AYDFI +M + PD + G+LL AC+IHG ++LG+ + RL + S + G
Sbjct: 432 LLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGY 491
Query: 322 YVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQI 381
YVLLSN YA+ GKW+ ++R+ +E G++K PG S+IEVN ++ F G+ HP+ ++I
Sbjct: 492 YVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEI 551
Query: 382 YKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRV 441
Y++++ L +K GY P VL D+E+ EKE L HSERLAI +G+IST P + IR+
Sbjct: 552 YEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRI 611
Query: 442 VKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
KNLRVC DCH+ K I+ IT+R+I+VRD NRFHHF++G CSCGDYW
Sbjct: 612 FKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 658
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 144/308 (46%), Gaps = 18/308 (5%)
Query: 50 VVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
+ ST ++N Y G V + F ++ KD W +MI V NG A+ F ++
Sbjct: 51 IFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLL 110
Query: 110 -DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+RP+ T VL AC G L GR IH + K N V +LI+MYSR G
Sbjct: 111 VSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTG 167
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL---- 224
A +F++M RD+ ++N++I+GL +G + +A+++ EM +GI+ VT V +L
Sbjct: 168 IARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFV 227
Query: 225 NACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM----K 280
+ + GL+D ++F+ + + + ++ ++ G EA + M +
Sbjct: 228 DMYAKLGLLDSAHKVFEIIPVK-----DVISWNTLITGYAQNGLASEAIEVYKMMEECKE 282
Query: 281 IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNAYASSGKWKEAV 339
I P+ S+L A G LQ G +I R++ D L + Y G+ +A+
Sbjct: 283 IIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAM 342
Query: 340 QIRAKMKE 347
+ ++ +
Sbjct: 343 SLFYQVPQ 350
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/494 (39%), Positives = 308/494 (62%), Gaps = 7/494 (1%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR +H +L+ GL S + LV +Y KCG ++A ++F+ M D VA + +I Y
Sbjct: 326 QGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKN-RDAVAWSTLIGAY 384
Query: 61 VEHGL---VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ-RDNVRPNE 116
+G A +VF R+ +DT+ W AMI V+NG A+ +FREM ++P+
Sbjct: 385 ASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDA 444
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
VT + VL AC+ LG L + +H+ + + ++ N +V LINMY+RCG +++A ++F
Sbjct: 445 VTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAA 504
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
KE+ V ++ +++A + +GR EA+++F+EM +G++P VT+ +L C+HGG ++ G
Sbjct: 505 AKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQG 564
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
+ F M + + P +H+ +VDLL R GR +A + + +M PD + + L+AC+
Sbjct: 565 WRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACR 624
Query: 297 IHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGC 356
IHGKL+LGE A+R+ + + + Y+ +SN YA+ G W++ +R KM+E G++K PG
Sbjct: 625 IHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGL 684
Query: 357 SSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWA 416
S IEV+ ++HEF G HP+ ++I +++ L +++ GY P T+ VLHD+ + EKE
Sbjct: 685 SFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETM 744
Query: 417 LAIHSERLAICYGLISTKPY-TTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
L HSE++AI +GL+S++ IRVVKNLRVC+DCH+ K IA I R IIVRD NRFH
Sbjct: 745 LLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDIIVRDCNRFH 804
Query: 476 HF-ENGTCSCGDYW 488
F +G CSCGDYW
Sbjct: 805 RFSSDGKCSCGDYW 818
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 173/361 (47%), Gaps = 35/361 (9%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GREIH +V GL S +S LV +Y + G DA ++
Sbjct: 125 QGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRM-------------------- 164
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
F ++ +D W A+I ++G+ + AL +F+EM+ D V+PN T +
Sbjct: 165 ------------FQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCD-VKPNSTTYI 211
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+S S L GR IH+ + + D + +V ALINMY +CG +A +VF++MK+R
Sbjct: 212 NVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKR 271
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D+ ++N +I ++G EA+E+++++ +G + TK TFV +L ACS + G +
Sbjct: 272 DMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQG-RLV 330
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
S + G++ ++ +V++ ++ G EEA MK D + +L+ A +G
Sbjct: 331 HSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMK-NRDAVAWSTLIGAYASNGY 389
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+ + K S D+ ++ + Y +G A++I +M A K + I
Sbjct: 390 GKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIA 449
Query: 361 V 361
V
Sbjct: 450 V 450
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 172/356 (48%), Gaps = 39/356 (10%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR+IH +++ G ++ L+ +YGKCG +A ++FD+M + D+V+ VMI CY
Sbjct: 225 EGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKK-RDMVSWNVMIGCY 283
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V NG+ AL+L++++ + + + T V
Sbjct: 284 -------------------------------VLNGDFHEALELYQKLDMEGFKRTKATFV 312
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L ACS + AL GR +HS++ + +D V AL+NMY++CG +++A +VF MK R
Sbjct: 313 SILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNR 372
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D +++LI A +G +A + + G R T +++ ++ G +IF
Sbjct: 373 DAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDT-ISWNAMITTYVQNGCAVAAMKIF 431
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDF---ITNMKIAPDHIMLGSLLSACKI 297
+ MT G++P + +++ + +GR E I+ ++ + ++ +L++
Sbjct: 432 REMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYAR 491
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
G L+ E++ + ++ + A++ G++ EA+ + +M GV+ +
Sbjct: 492 CGSLEEAERL---FAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPD 544
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 157/365 (43%), Gaps = 41/365 (11%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR +H ++ + L+ +YGKC DA +F+ M
Sbjct: 25 EGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMD--------------- 69
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ ++ V W AMI +NG AL L+ M + + VT V
Sbjct: 70 ---------------WRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFV 114
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL ACS L GR IH+ + +D + AL+ MY+R G + A ++F+ ++ R
Sbjct: 115 SVLGACSSLAQ---GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTR 171
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D T++N++I + G A+ +F+EM ++P T++ V++ S ++ G +I
Sbjct: 172 DETSWNAVILAHSQSGDWSGALRIFKEM-KCDVKPNSTTYINVISGFSTPEVLPEGRKIH 230
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKI 297
+ + G + + ++++ + G EA + MK + ++M+G +
Sbjct: 231 AEIVAN-GFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDF 289
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
H L+L +++ ++ T+V + A +S + + + + E G+ E +
Sbjct: 290 HEALELYQKLD---MEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVA 346
Query: 358 SIEVN 362
+ VN
Sbjct: 347 TALVN 351
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 123/260 (47%), Gaps = 23/260 (8%)
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
+P+ VT + VL +CS G + GR +H + R + + +VG ALI+MY +C + A
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 173 VFEEM--KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-- 228
VFE M ++R+V ++N++IA A +G S EA+ ++ M QG+ VTFV VL ACS
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123
Query: 229 ------HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIA 282
H + G + FQS+ +V + +R G +A +++
Sbjct: 124 AQGREIHNRVFYSGLDSFQSLAN------------ALVTMYARFGSVGDAKRMFQSLQT- 170
Query: 283 PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIR 342
D +++ A G +I K + +S TY+ + + +++ E +I
Sbjct: 171 RDETSWNAVILAHSQSGDWSGALRIFKEMKCDVKPNSTTYINVISGFSTPEVLPEGRKIH 230
Query: 343 AKMKEAGVQKEPGCSSIEVN 362
A++ G + ++ +N
Sbjct: 231 AEIVANGFDTDLVVATALIN 250
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/487 (41%), Positives = 305/487 (62%), Gaps = 2/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ HG VL+ G S + L+++Y KC A ++FD M VV ++ YV
Sbjct: 356 GKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN-KTVVTWNSIVAGYV 414
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ-RDNVRPNEVTIV 120
E+G V+ A+E F + K+ V W +I GLV+ A+++F MQ ++ V + VT++
Sbjct: 415 ENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMM 474
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+ SAC LGAL+L +WI+ Y+ K+ I L+ +G L++M+SRCGD + A+ +F + R
Sbjct: 475 SIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR 534
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV+ + + I +AM G + A+E+F +MI QG++P V FVG L ACSHGGLV G EIF
Sbjct: 535 DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIF 594
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM + +G+ P+ HYGC+VDLL R G EEA I +M + P+ ++ SLL+AC++ G
Sbjct: 595 YSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGN 654
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+++ A+++ +G+YVLLSN YAS+G+W + ++R MKE G++K PG SSI+
Sbjct: 655 VEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQ 714
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+ + HEF GD HP+ I + E+ Q G+ P VL D+++ EK + L+ H
Sbjct: 715 IRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRH 774
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LA+ YGLIS+ TTIR+VKNLRVC+DCHS K + + R+II+RD NRFH+ G
Sbjct: 775 SEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQG 834
Query: 481 TCSCGDY 487
CSCGD+
Sbjct: 835 KCSCGDF 841
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 130/254 (51%), Gaps = 44/254 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +IHG ++K+G + + LV Y +CGE
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGE---------------------------- 184
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN-VRPNEVTIV 120
+++A +VF + ++ V WT+MI G R A+DLF M RD V PN VT+V
Sbjct: 185 ----LDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMV 240
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
CV+SAC++L LE G +++++ I++N ++ AL++MY +C ID A ++F+E
Sbjct: 241 CVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGAS 300
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------H 229
++ N++ + G + EA+ +F M++ G+RP +++ + +++CS H
Sbjct: 301 NLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCH 360
Query: 230 GGLVDLGFEIFQSM 243
G ++ GFE + ++
Sbjct: 361 GYVLRNGFESWDNI 374
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 162/368 (44%), Gaps = 70/368 (19%)
Query: 46 ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
E ND++ S +++ Y++ ++ A +F + AM VR G AL +F
Sbjct: 268 EVNDLMVS-ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFN 326
Query: 106 EMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG 165
M VRP+ ++++ +S+CSQL + G+ H Y+ ++ + + ALI+MY +C
Sbjct: 327 LMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCH 386
Query: 166 DIDKALQVFEEMKERDVTTYNSLIAGLAMHG--------------RSI------------ 199
D A ++F+ M + V T+NS++AG +G ++I
Sbjct: 387 RQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQ 446
Query: 200 -----EAVEMFREMINQ-GIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQI 253
EA+E+F M +Q G+ VT + + +AC H G +DL I+ + ++ GI+ +
Sbjct: 447 GSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQLDV 505
Query: 254 EHYGCIVDLLSRVGRPEEA---YDFITNMKIA---------------------------- 282
+VD+ SR G PE A ++ +TN ++
Sbjct: 506 RLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQ 565
Query: 283 ---PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR--SADSGTYVLLSNAYASSGKWKE 337
PD + L+AC G +Q G++I +L S + Y + + +G +E
Sbjct: 566 GLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEE 625
Query: 338 AVQIRAKM 345
AVQ+ M
Sbjct: 626 AVQLIEDM 633
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 114/220 (51%), Gaps = 6/220 (2%)
Query: 48 NDVVASTVMINCYVEHGLVEN---AFEVFSRVKVKDT-VCWTAMIDGLVRNGEMARALDL 103
NDV T ++ E G E+ A EVF + T + ++I G +G A+ L
Sbjct: 62 NDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILL 121
Query: 104 FREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSR 163
F M + P++ T LSAC++ A G IH + K + V +L++ Y+
Sbjct: 122 FLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAE 181
Query: 164 CGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI-NQGIRPTKVTFVG 222
CG++D A +VF+EM ER+V ++ S+I G A + +AV++F M+ ++ + P VT V
Sbjct: 182 CGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVC 241
Query: 223 VLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDL 262
V++AC+ ++ G +++ + R+ GIE +VD+
Sbjct: 242 VISACAKLEDLETGEKVY-AFIRNSGIEVNDLMVSALVDM 280
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/487 (41%), Positives = 295/487 (60%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H +++ G L+ +Y KCG K+A +LF ++P
Sbjct: 317 GKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPH--------------- 361
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+D V WTAM+ G + G A+DLFR MQ+ ++P+++T
Sbjct: 362 -----------------RDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTS 404
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
L++CS L+ G+ IH + L+ + AL++MY++CG +D A VF +M ER+
Sbjct: 405 ALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERN 464
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V + ++I G A HGR EA+E F +M QGI+P KVTF VL+AC+H GLV+ G + F+
Sbjct: 465 VVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFR 524
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM DYGI+P +EHY C VDLL R G EEA + I M P + G+LLSAC+IH +
Sbjct: 525 SMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDV 584
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+ GE+ A+ +L D G YV LSN YA++G++++A ++R M++ V KEPG S IEV
Sbjct: 585 ERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEV 644
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ ++H F + D HP+ ++IY ++ +L + +K +GY P T VLHD+++ +K L HS
Sbjct: 645 DGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQGYVPDTRFVLHDVDEEQKVQTLCSHS 704
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ERLAI YGL+ T P T IR+VKNLRVC DCH+ K I+ + R+II RD +RFHHF +G
Sbjct: 705 ERLAITYGLMKTPPGTPIRIVKNLRVCGDCHTASKFISKVVGREIIARDAHRFHHFVDGV 764
Query: 482 CSCGDYW 488
CSCGD+W
Sbjct: 765 CSCGDFW 771
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 174/384 (45%), Gaps = 66/384 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GRE+H +LK G++ NR L+ +Y KCG DA +
Sbjct: 114 QGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARR--------------------- 152
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
VF ++ ++ V WTAMI+ V + A + M+ +P++VT V
Sbjct: 153 -----------VFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFV 201
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L+A + L++G+ +H + K ++L VG +L+ MY++CGDI KA +F+++ E+
Sbjct: 202 SLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEK 261
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS------HGGLV- 233
+V T+ LIAG A G+ A+E+ +M + P K+T+ +L C+ HG V
Sbjct: 262 NVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVH 321
Query: 234 ------DLGFEIF---------------QSMTRDYGIEPQ--IEHYGCIVDLLSRVGRPE 270
G EI+ + + +G P + + +V +++G +
Sbjct: 322 RYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHD 381
Query: 271 EAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC-RSADSGTYVLLS 326
EA D M+ I PD + S L++C LQ G+ I ++L+ S D L
Sbjct: 382 EAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALV 441
Query: 327 NAYASSGKWKEAVQIRAKMKEAGV 350
+ YA G +A + +M E V
Sbjct: 442 SMYAKCGSMDDARLVFNQMSERNV 465
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 150/338 (44%), Gaps = 65/338 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H ++ K GL LV +Y KCG+
Sbjct: 216 GQKVHMEIAKAGLELEPRVGTSLVGMYAKCGD---------------------------- 247
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ A +F ++ K+ V WT +I G + G++ AL+L +MQ+ V PN++T
Sbjct: 248 ----ISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTS 303
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L C+ ALE G+ +H Y+ + V ALI MY +CG + +A ++F ++ RD
Sbjct: 304 ILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRD 363
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V T+ +++ G A G EA+++FR M QGI+P K+TF L +CS + G I Q
Sbjct: 364 VVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQ 423
Query: 242 SMTR-DYGI-----------------------------EPQIEHYGCIVDLLSRVGRPEE 271
+ Y + E + + ++ ++ GR E
Sbjct: 424 QLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCRE 483
Query: 272 AYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQ 306
A ++ MK I PD + S+LSAC G ++ G +
Sbjct: 484 ALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRK 521
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 160/378 (42%), Gaps = 79/378 (20%)
Query: 53 STVMINCYVEHGLVENAFEVFSRV------------KVKDTVCWTAMIDGLVRNGEMARA 100
S +M N Y + V+ AFE+ + + DT+ + + L + G + A
Sbjct: 23 SILMFNRYQSN--VDTAFELTTPTVSHDQLPGNAGFRKVDTLANSGDVSILCKQGRLKEA 80
Query: 101 LDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINM 160
L + M R +L C++L +LE GR +H+ + K I N + L++M
Sbjct: 81 LGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSM 140
Query: 161 YSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTF 220
Y++CG + A +VF+ +++R++ ++ ++I +++EA + + M G +P KVTF
Sbjct: 141 YAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTF 200
Query: 221 VGVLNACSHGGLVDLGFEIFQSMTR-DYGIEPQ--------------IEHYGCIVDLL-- 263
V +LNA ++ L+ +G ++ + + +EP+ I I D L
Sbjct: 201 VSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPE 260
Query: 264 -------------SRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQI 307
++ G+ + A + + M+ +AP+ I S+L C L+ G+++
Sbjct: 261 KNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKV 320
Query: 308 -------------------------------AKRLL-DCRSADSGTYVLLSNAYASSGKW 335
A++L D D T+ + YA G
Sbjct: 321 HRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFH 380
Query: 336 KEAVQIRAKMKEAGVQKE 353
EA+ + +M++ G++ +
Sbjct: 381 DEAIDLFRRMQQQGIKPD 398
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 62/136 (45%), Gaps = 32/136 (23%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+ IH Q++ G + + LV +Y KCG DA +F++M E N VVA T MI
Sbjct: 417 EGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERN-VVAWTAMITGC 475
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+HG A E F +M++ ++P++VT
Sbjct: 476 AQHGRCREALE-------------------------------YFEQMKKQGIKPDKVTFT 504
Query: 121 CVLSACSQLGALELGR 136
VLSAC+ +G +E GR
Sbjct: 505 SVLSACTHVGLVEEGR 520
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 83/181 (45%), Gaps = 7/181 (3%)
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
++ D + ++ L GR EA+ + MI QG R F G+L C+ ++ G
Sbjct: 56 FRKVDTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQG 115
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLS 293
E+ ++ + GI+P ++ + ++ G +A +D I + I M+ + ++
Sbjct: 116 REVHAAILKS-GIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVA 174
Query: 294 ACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
+ + E + +L C+ D T+V L NA+ + + ++ ++ +AG++ E
Sbjct: 175 GNQNLEAYKCYETM--KLAGCKP-DKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELE 231
Query: 354 P 354
P
Sbjct: 232 P 232
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/489 (41%), Positives = 300/489 (61%), Gaps = 2/489 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN-DVVASTVMINCY 60
G+++H +L+ + N L+ Y K G ++A ++ D+ E + +V++ T ++ Y
Sbjct: 316 GKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGY 375
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V+ G +E+A E+F + +D V WTAMI G +NG A+DLFR M PN T+
Sbjct: 376 VKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLA 435
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLS C+ L L+ G+ IH + ++ + V A+I MY+R G A ++F+++ R
Sbjct: 436 AVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWR 495
Query: 181 DVT-TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
T T+ S+I LA HG+ EAV +F EM+ G+ P ++T+VGVL+ACSH G V+ G
Sbjct: 496 KETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRY 555
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+ + ++ I P++ HY C+VDLL+R G EA +FI M + PD I GSLLSAC++H
Sbjct: 556 YDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHK 615
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+L E A++LL +SG Y ++N Y++ G+W +A +I KE V+KE G S
Sbjct: 616 NAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWT 675
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
+ ++IH F D+ HPQR+ +Y + + +K G+ P + VLHD++D KE L+
Sbjct: 676 HIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSR 735
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GLIST TT+RV+KNLRVCNDCH+ IK I+ +T R+IIVRD RFHHF +
Sbjct: 736 HSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRD 795
Query: 480 GTCSCGDYW 488
G CSC DYW
Sbjct: 796 GLCSCKDYW 804
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 161/346 (46%), Gaps = 42/346 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGK----CGEFKDAMQLFDEMPECN-DVVASTVM 56
GR IH + +K GL ++ L+ YG+ G +DA +LFDE+P +V +
Sbjct: 45 GRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNSL 104
Query: 57 INCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
++ + + G + +A VF+ + +D V WT M+ GL R G A+ +M D P +
Sbjct: 105 LSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQ 164
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
T+ VLS+C+ A +GR +HS++ K + V +++NMY +CGD + A VFE
Sbjct: 165 FTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFER 224
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
M R V+++N++++ GR A +F M + I V++ ++ + GL
Sbjct: 225 MPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSI----VSWNAMIAGYNQNGLDAKA 280
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
++F M + +APD + S+LSAC
Sbjct: 281 LKLFSRMLHES--------------------------------SMAPDEFTITSVLSACA 308
Query: 297 IHGKLQLGEQIAKRLLDCRSA-DSGTYVLLSNAYASSGKWKEAVQI 341
G +++G+Q+ +L A +S L + YA SG + A +I
Sbjct: 309 NLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRI 354
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/485 (39%), Positives = 300/485 (61%), Gaps = 33/485 (6%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
+HG ++K G + L++ Y KCGE + ++FD M E
Sbjct: 283 VHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAE------------------ 324
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN-VRPNEVTIVCVL 123
+D + W ++I +NG ++++F M +D + N VT+ VL
Sbjct: 325 --------------RDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVL 370
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
AC+ G+ LG+ IH + K ++ N VG ++I+MY +CG ++ A + F+ M+E++V
Sbjct: 371 LACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVK 430
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
++++++AG MHG + EA+E+F EM G++P +TFV VL ACSH GL++ G+ F++M
Sbjct: 431 SWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAM 490
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQL 303
+ ++ +EP +EHYGC+VDLL R G +EA+D I MK+ PD ++ G+LL AC++H + L
Sbjct: 491 SHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDL 550
Query: 304 GEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNN 363
GE A++L + + G YVLLSN YA +G+W++ ++R MK +G+ K PG S +++
Sbjct: 551 GEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKG 610
Query: 364 EIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSER 423
+H F++GD HPQ E+IY+ +++L ++ GY P VLHD+ EKE L +HSE+
Sbjct: 611 RVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEK 670
Query: 424 LAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCS 483
LA+ +G+++T P TTI ++KNLRVC DCH+ IK I+ I R+I+VRD RFHHF +G CS
Sbjct: 671 LAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCS 730
Query: 484 CGDYW 488
CGDYW
Sbjct: 731 CGDYW 735
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 172/382 (45%), Gaps = 62/382 (16%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+ H Q L G + LV++Y KCGE +DA LFDE+ N +V+ T MI YV
Sbjct: 171 GRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRN-IVSWTSMITGYV 229
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ A +F V+++ G +GE+ V P + +V
Sbjct: 230 QNDDAHRALLLFKEFLVEES--------GSEGDGEVC-------------VDP--IAMVS 266
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLSACS++ + +H ++ K + + V L++ Y++CG++ + +VF+ M ERD
Sbjct: 267 VLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERD 326
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSHGGLVDLGFEIF 240
V ++NS+IA A +G S E++E+F M+ G I VT VL AC+H G LG I
Sbjct: 327 VISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIH 386
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPE------------------------------ 270
+ + G+E + I+D+ + G+ E
Sbjct: 387 DQVIK-MGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHA 445
Query: 271 -EAYDFITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT--YVL 324
EA + M +A P++I S+L+AC G L+ G K + + G Y
Sbjct: 446 KEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGC 505
Query: 325 LSNAYASSGKWKEAVQIRAKMK 346
+ + +G KEA + MK
Sbjct: 506 MVDLLGRAGYLKEAFDLIKGMK 527
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 145/320 (45%), Gaps = 45/320 (14%)
Query: 76 VKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELG 135
V + W ++I L R+G+ AL F M++ +++PN T C + +CS L L G
Sbjct: 112 VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSG 171
Query: 136 RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMH 195
R H + + V AL++MYS+CG++ A +F+E+ R++ ++ S+I G +
Sbjct: 172 RQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQN 231
Query: 196 GRSIEAVEMFREMI-----NQG---IRPTKVTFVGVLNACS-----------HGGLVDLG 236
+ A+ +F+E + ++G + + V VL+ACS HG L+ G
Sbjct: 232 DDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRG 291
Query: 237 FE----IFQSMTRDYG---------------IEPQIEHYGCIVDLLSRVGRPEEAYDFIT 277
FE + ++ Y E + + I+ + ++ G E+ +
Sbjct: 292 FEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFH 351
Query: 278 NM----KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLS--NAYAS 331
M +I + + L ++L AC G +LG+ I +++ +S +V S + Y
Sbjct: 352 RMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIK-MGLESNVFVGTSIIDMYCK 410
Query: 332 SGKWKEAVQIRAKMKEAGVQ 351
GK + A + +M+E V+
Sbjct: 411 CGKVEMARKAFDRMREKNVK 430
>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 184/367 (50%), Positives = 262/367 (71%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L AC+ + ALE G+ +H+ + K +L+ V L++MY +CG I+ A +VF ++ E D
Sbjct: 4 ILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPD 63
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++N++I+GLA HG EAV +F +M+ G++P ++TFV VL+ CSH GLVD G F
Sbjct: 64 VASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFD 123
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SMTRD+GI P+ EHY C+VDL R G +EA +FI M + P+ + GSLL AC++HG +
Sbjct: 124 SMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNI 183
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+L E+ ++L++ + GTYVLLSN YA++G+W +A ++R MK+ V+KEPGCS IEV
Sbjct: 184 ELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSWIEV 243
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N++H FI+GD HPQ E+IY+ ++ L +K GY P+T VLHD+E+ +KEW L HS
Sbjct: 244 QNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWILGHHS 303
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +G+IST P TTIRVVKNLRVC DCH+ K I+ I R+I++RD +RFHHF++G
Sbjct: 304 EKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHHFKDGQ 363
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 364 CSCGDYW 370
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 110/236 (46%), Gaps = 35/236 (14%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+++H ++K+G + S LV++YGKCG
Sbjct: 16 QGKQVHADIIKIGFELDVSVSNGLVDMYGKCGR--------------------------- 48
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+E+A EVFS++ D W AMI GL ++G A+ LF +M + V+PN++T V
Sbjct: 49 -----IEDAQEVFSKLLEPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFV 103
Query: 121 CVLSACSQLGALELGR-WIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
VLS CS G ++ GR + S H I +++++ R G +D+AL +M
Sbjct: 104 VVLSGCSHAGLVDEGRNYFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPV 163
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
E + + + SL+ +HG +IE E E + + T+V + N + G D
Sbjct: 164 EPNASVWGSLLGACRVHG-NIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWD 218
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/487 (40%), Positives = 308/487 (63%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H V + G+ ++ + + L+++Y KCG+F A Q+FD + + +I+ Y
Sbjct: 258 GRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYC 317
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+HG V+ A +F ++V+D + + +M+ G + +G++ AL LF M+R ++R + T+V
Sbjct: 318 KHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVN 377
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+AC+ LGAL+ GR +H+ + + ++ + +G AL++MY +CG +D+A VF+ M +RD
Sbjct: 378 LLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRD 437
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V T+ ++IAGLA +G A+E F +M G +P V+++ VL ACSH L++ G F
Sbjct: 438 VHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFD 497
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M Y I PQIEHYGC++DLL R G +EA D + M I P+ ++ S+LSAC++H +
Sbjct: 498 EMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHI 557
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
L + A+ LL + G YV L N Y S +W+ A +IR M+E V+K G SSI V
Sbjct: 558 DLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSSITV 617
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
++H+F++ D HP+ +I ++E+ +K GYSP T + D+++ EKE AL HS
Sbjct: 618 AGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSLGYSPLTSQITVDVDEEEKEQALLAHS 677
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GLI+ P + + KNLRVC DCHS IKLI+ + R+IIVRDR+RFHHF GT
Sbjct: 678 EKLAIAFGLINLAPNLPVHIRKNLRVCEDCHSAIKLISRLWNREIIVRDRSRFHHFREGT 737
Query: 482 CSCGDYW 488
CSC D+W
Sbjct: 738 CSCNDFW 744
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 137/282 (48%), Gaps = 34/282 (12%)
Query: 23 KLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTV 82
L+ +Y + G DA + FDE+ D VA T++I+ + G++ + + S+ V+D +
Sbjct: 147 SLIHMYIRLGLAADARRAFDEI-HVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVI 205
Query: 83 CWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM 142
WT++I R A+ F+ M + P+EVT++ VLSAC++L LELGR +H +
Sbjct: 206 SWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLV 265
Query: 143 GKHRIDLNHIVGGALINMYSRCGDIDKALQV----------------------------- 173
+ + + + ALI+MY++CGD A QV
Sbjct: 266 EEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVA 325
Query: 174 ---FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
F+EM+ RD+ T+NS++ G G+ EA+ +F M +R T V +L AC+
Sbjct: 326 RSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASL 385
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
G + G + + + +E I ++D+ + GR +EA
Sbjct: 386 GALQQGRALHACIEQRL-VEADIYLGTALLDMYMKCGRVDEA 426
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 131/336 (38%), Gaps = 58/336 (17%)
Query: 56 MINCYVEHGL-VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP 114
++NC H L + A +F R+ + TA+ + R LFR M+R VRP
Sbjct: 42 LVNCLEPHPLHLRYALHLFDRMPPSTFLFDTALRACSRAGSDPHRPFLLFRRMRRAGVRP 101
Query: 115 NEVTIVCV------------LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYS 162
+ T + L C+ L A L + S V +LI+MY
Sbjct: 102 DGFTFHFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAAP--------FVSNSLIHMYI 153
Query: 163 RCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHG-------------------------- 196
R G A + F+E+ +D + LI+GLA G
Sbjct: 154 RLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAA 213
Query: 197 -----RSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEP 251
R+ EAV F+ M++ GI P +VT + VL+AC+ ++LG + + + G+
Sbjct: 214 YSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSL-HLLVEEKGMPT 272
Query: 252 QIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
++D+ ++ G A + P +++ HG + +A+ L
Sbjct: 273 SENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHV----DVARSL 328
Query: 312 LD-CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
D D T+ + Y SG+ +EA+ + M+
Sbjct: 329 FDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMR 364
>gi|413945386|gb|AFW78035.1| hypothetical protein ZEAMMB73_343828 [Zea mays]
Length = 608
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/488 (40%), Positives = 300/488 (61%), Gaps = 2/488 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H ++ + L+++Y KCG +DA ++FD + N VV T +I+ Y
Sbjct: 122 GRQLHAHFAASPYSADNVVKSSLIDMYCKCGVPQDARKVFDSIGVKNSVVW-TALISGYA 180
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+G A ++F + WTA+I G V+ G A+ LF EM+RD++R ++ ++
Sbjct: 181 SNGCTGEALDLFQSMPAHGLFTWTALISGFVKAGNYTGAMGLFVEMRRDDIRIHDAFVLA 240
Query: 122 -VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+ + L AL LGR +H ++ + + IVG AL++MYS+C DI A +VFE + R
Sbjct: 241 TVIGGAADLAALVLGRQLHGFVMRLGFLSSMIVGNALVDMYSKCSDIHSAREVFEGITVR 300
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++ +++ G A HGR+ E ++ M+ G++P +VTFVG++ ACSH GLV G ++F
Sbjct: 301 DVISWTTILVGEAQHGRAEEVFALYNRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQLF 360
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM R+YG++P ++HY C +DLLSR G EA IT M PD G+LLSACK H
Sbjct: 361 DSMKREYGMKPGVQHYTCYLDLLSRSGYLSEAEKLITTMPYEPDEATWGALLSACKKHND 420
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
Q+ ++A LL+ R D TY+LLSN YA + KW ++R M E ++K PG S +E
Sbjct: 421 TQMCLRVADNLLELRPKDPSTYILLSNVYAVNCKWDSVAKVRKIMAEMEIRKVPGYSWVE 480
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
E F G++ E+I ++EL ++ GY P T V+HD+E+ EKE L +H
Sbjct: 481 AGRESRIFHAGEVPLDVGEEITCFLEELVSEMRKRGYVPDTSSVMHDLEEHEKEQHLFVH 540
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLA+ +G++ + P + IRVVKNLRVC DCH+++K I+ I +RKIIVRD +RFHHFE+G
Sbjct: 541 SERLAVAFGILKSPPGSVIRVVKNLRVCGDCHTVMKFISAIAQRKIIVRDASRFHHFEDG 600
Query: 481 TCSCGDYW 488
CSC ++W
Sbjct: 601 NCSCSEFW 608
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 143/307 (46%), Gaps = 15/307 (4%)
Query: 52 ASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN 111
A ++++ Y L+ +A F +D ++A++ + + + L L R M D+
Sbjct: 38 APALLVSAYARSCLLPDARRAFDDAPRRDLHLYSALLAAVSHSSDPELVLPLLRRMLSDD 97
Query: 112 -VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
+RP+ + + SA +L +L LGR +H++ +++V +LI+MY +CG A
Sbjct: 98 ALRPDHFVLASLASAAGRLRSLRLGRQLHAHFAASPYSADNVVKSSLIDMYCKCGVPQDA 157
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
+VF+ + ++ + +LI+G A +G + EA+++F+ M G+ G + A ++
Sbjct: 158 RKVFDSIGVKNSVVWTALISGYASNGCTGEALDLFQSMPAHGLFTWTALISGFVKAGNYT 217
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRV-GRPEEAYDFITNMKIAPDHIMLG 289
G + L E+ + R + G DL + V GR + + F+ + I+
Sbjct: 218 GAMGLFVEMRRDDIRIHDAFVLATVIGGAADLAALVLGR--QLHGFVMRLGFLSSMIVGN 275
Query: 290 SLL---SACK-IHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
+L+ S C IH ++ E I R S T +L+ A G+ +E + +M
Sbjct: 276 ALVDMYSKCSDIHSAREVFEGIT-----VRDVISWTTILVGE--AQHGRAEEVFALYNRM 328
Query: 346 KEAGVQK 352
AG++
Sbjct: 329 LLAGMKP 335
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/489 (41%), Positives = 299/489 (61%), Gaps = 34/489 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+IH V+K S+ L+++Y K G+ +A ++FD +PE
Sbjct: 130 GRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPE--------------- 174
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+D V TA+I G + G ALDLFR +QR+ +R N VT
Sbjct: 175 -----------------RDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYAS 217
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL+A S L AL+ GR +HS++ + ++ ++ +LI+MYS+CG + + ++F+ M ER
Sbjct: 218 VLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERT 277
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSHGGLVDLGFEIF 240
V ++N+++ G + HG EAVE+F+ M + ++P VTF+ VL+ CSHGG+ D G EIF
Sbjct: 278 VISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIF 337
Query: 241 QSMTRDY-GIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
M G EP+IEHYGC+VDL R GR EEA++FI M P + GSLL AC++H
Sbjct: 338 YEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQ 397
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+ +GE +A+RLL+ S ++G YV+LSN YAS+G+W + +R MKE V KEPG S I
Sbjct: 398 NVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWI 457
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E++ +H F D HP++E+++ K++EL +K GY P VL+D++D +KE L
Sbjct: 458 ELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQG 517
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LA+ +GLI T T +R++KNLR+C DCH+ K ++ + R++ +RD+NRFHH
Sbjct: 518 HSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVG 577
Query: 480 GTCSCGDYW 488
GTCSCGDYW
Sbjct: 578 GTCSCGDYW 586
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 165/382 (43%), Gaps = 69/382 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+ +H ++K R +L+ LY KC DA ++ DEMPE
Sbjct: 28 EGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPE-------------- 73
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++ V WTAMI G + G + AL LF EM PNE T
Sbjct: 74 ------------------RNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFA 115
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL++C+ +LGR IHS + K + + VG +L++MY++ G I +A +VF+ + ER
Sbjct: 116 TVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPER 175
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV + ++I+G A G EA+++FR + +G+R VT+ VL A S +D G ++
Sbjct: 176 DVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVH 235
Query: 241 QSMTR------------------------------DYGIEPQIEHYGCIVDLLSRVGRPE 270
+ R D E + + ++ S+ G
Sbjct: 236 SHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGR 295
Query: 271 EAYDFITNM----KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL---DCRSADSGTYV 323
EA + M K+ PD + ++LS C G G +I ++ D + Y
Sbjct: 296 EAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYG 355
Query: 324 LLSNAYASSGKWKEAVQIRAKM 345
+ + + +G+ +EA + KM
Sbjct: 356 CVVDLFGRAGRVEEAFEFIKKM 377
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/440 (44%), Positives = 288/440 (65%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D+ S+ +++ YV+ G + A F + V D V WT MI G + NGE RA +F +M+
Sbjct: 551 DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMR 610
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
V P+E TI + A S L ALE GR IH+ K + VG +L++MY++CG ID
Sbjct: 611 LMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSID 670
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +F+ ++ ++T +N+++ GLA HG E +++F++M + GI+P KVTF+GVL+ACS
Sbjct: 671 DAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACS 730
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLV ++ +SM DYGI+P+IEHY C+ D L R G ++A + I +M + M
Sbjct: 731 HSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMY 790
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+LL+AC++ G + G+++A +LL+ DS YVLLSN YA++ KW E R MK
Sbjct: 791 RTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGH 850
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
V+K+PG S IEV N+IH F++ D + Q E IY+K++++ + +K EGY P T+ L D+
Sbjct: 851 KVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDV 910
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
E+ EKE AL HSE+LA+ +GL+ST P T IRV+KNLRVC DCH+ +K IA + R+I++
Sbjct: 911 EEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVL 970
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD NRFH F++G CSCGDYW
Sbjct: 971 RDANRFHRFKDGICSCGDYW 990
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 123/262 (46%), Gaps = 39/262 (14%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
HG K+GL + LV +Y K G+ K+ LF+EMP DVV +M+ Y+E G
Sbjct: 167 FHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPY-RDVVLWNLMLKAYLEMG 225
Query: 65 LVENAFEVFSRVKVKD------TVCWTAMIDG-----------------------LVRN- 94
E A ++ S T+ A I G + RN
Sbjct: 226 FKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNK 285
Query: 95 --------GEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHR 146
G+ + L F +M +V ++VT + +L+ ++ +L LG+ +H K
Sbjct: 286 GLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLG 345
Query: 147 IDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
+DL V +LINMY + A VF+ M ERD+ ++NS+IAG+A +G +EAV +F
Sbjct: 346 LDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFM 405
Query: 207 EMINQGIRPTKVTFVGVLNACS 228
+++ G++P + T VL A S
Sbjct: 406 QLLRCGLKPDQYTMTSVLKAAS 427
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 146/311 (46%), Gaps = 11/311 (3%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D ST +I+ Y + ++ A +F R D V W AM+ G ++ + + L LF M
Sbjct: 450 SDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALM 508
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ R ++ T+ V C L A+ G+ +H+Y K DL+ V +++MY +CGD+
Sbjct: 509 HKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDM 568
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A F+ + D + ++I+G +G A +F +M G+ P + T + A
Sbjct: 569 SAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKAS 628
Query: 228 SHGGLVDLGFEIF-QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDF---ITNMKIAP 283
S ++ G +I ++ + +P + +VD+ ++ G ++AY I M I
Sbjct: 629 SCLTALEQGRQIHANALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEMMNITA 686
Query: 284 DHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQ-IR 342
+ ML L + LQL +Q+ + D T++ + +A + SG EA + +R
Sbjct: 687 WNAMLVGLAQHGEGKETLQLFKQMKSLGI---KPDKVTFIGVLSACSHSGLVSEAYKHMR 743
Query: 343 AKMKEAGVQKE 353
+ + G++ E
Sbjct: 744 SMHGDYGIKPE 754
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 149/359 (41%), Gaps = 45/359 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H LKLGL + L+ +Y K +F A +FD M E
Sbjct: 334 GQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSE--------------- 378
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+D + W ++I G+ +NG A+ LF ++ R ++P++ T+
Sbjct: 379 -----------------RDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTS 421
Query: 122 VLSACSQLG-ALELGRWIHSYMGKHRIDLNHI----VGGALINMYSRCGDIDKALQVFEE 176
VL A S L L L + +H H I +N++ V ALI+ YSR + +A +FE
Sbjct: 422 VLKAASSLPEGLSLSKQVHV----HAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER 477
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
D+ +N+++AG + +++F M QG R T V C ++ G
Sbjct: 478 -HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQG 536
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
++ + G + + I+D+ + G A F + PD + +++S C
Sbjct: 537 KQVHAYAIKS-GYDLDLWVSSGILDMYVKCGDMSAA-QFAFDSIPVPDDVAWTTMISGCI 594
Query: 297 IHGKLQLGEQIAKRL-LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
+G+ + + ++ L D T L+ A + ++ QI A + +P
Sbjct: 595 ENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDP 653
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 96/224 (42%), Gaps = 37/224 (16%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ H ++L R L+ +Y KCG A ++FD+MP+
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPD--------------- 102
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGE-----MARALDLFREMQRDNVRPNE 116
+D V W +++ ++ E + +A LFR +++D V +
Sbjct: 103 -----------------RDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSR 145
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
+T+ +L C G + H Y K +D + V GAL+N+Y + G + + +FEE
Sbjct: 146 MTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEE 205
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTF 220
M RDV +N ++ G EA+++ + G+ P ++T
Sbjct: 206 MPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 38/200 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR+IH LKL ++ LV++Y KCG D
Sbjct: 636 QGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDD------------------------ 671
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
A+ +F R+++ + W AM+ GL ++GE L LF++M+ ++P++VT +
Sbjct: 672 --------AYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFI 723
Query: 121 CVLSACSQLGAL-ELGRWIHSYMGKHRI--DLNHIVGGALINMYSRCGDIDKALQVFEEM 177
VLSACS G + E + + S G + I ++ H L + R G + +A + E M
Sbjct: 724 GVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHY--SCLADALGRAGLVKQAENLIESM 781
Query: 178 K-ERDVTTYNSLIAGLAMHG 196
E + Y +L+A + G
Sbjct: 782 SMEASASMYRTLLAACRVQG 801
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
Query: 132 LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAG 191
L LG+ H+ + + + LI+MYS+CG + A +VF++M +RD+ ++NS++A
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 192 LAMHGRSI-----EAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRD 246
A + +A +FR + + +++T +L C H G V E F
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV-WASESFHGYACK 173
Query: 247 YGIEPQIEHYGCIVDLLSRVGRPEE 271
G++ G +V++ + G+ +E
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKE 198
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/489 (41%), Positives = 299/489 (61%), Gaps = 34/489 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+IH V+K S+ L+++Y K G+ +A ++FD +PE
Sbjct: 597 GRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPE--------------- 641
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+D V TA+I G + G ALDLFR +QR+ +R N VT
Sbjct: 642 -----------------RDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYAS 684
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL+A S L AL+ GR +HS++ + ++ ++ +LI+MYS+CG + + ++F+ M ER
Sbjct: 685 VLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERT 744
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSHGGLVDLGFEIF 240
V ++N+++ G + HG EAVE+F+ M + ++P VTF+ VL+ CSHGG+ D G EIF
Sbjct: 745 VISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIF 804
Query: 241 QSMTRDY-GIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
M G EP+IEHYGC+VDL R GR EEA++FI M P + GSLL AC++H
Sbjct: 805 YEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQ 864
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+ +GE +A+RLL+ S ++G YV+LSN YAS+G+W + +R MKE V KEPG S I
Sbjct: 865 NVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWI 924
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E++ +H F D HP++E+++ K++EL +K GY P VL+D++D +KE L
Sbjct: 925 ELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQG 984
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LA+ +GLI T T +R++KNLR+C DCH+ K ++ + R++ +RD+NRFHH
Sbjct: 985 HSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVG 1044
Query: 480 GTCSCGDYW 488
GTCSCGDYW
Sbjct: 1045 GTCSCGDYW 1053
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 165/382 (43%), Gaps = 69/382 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+ +H ++K R +L+ LY KC DA ++ DEMPE
Sbjct: 495 EGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPE-------------- 540
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++ V WTAMI G + G + AL LF EM PNE T
Sbjct: 541 ------------------RNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFA 582
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL++C+ +LGR IHS + K + + VG +L++MY++ G I +A +VF+ + ER
Sbjct: 583 TVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPER 642
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV + ++I+G A G EA+++FR + +G+R VT+ VL A S +D G ++
Sbjct: 643 DVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVH 702
Query: 241 QSMTR------------------------------DYGIEPQIEHYGCIVDLLSRVGRPE 270
+ R D E + + ++ S+ G
Sbjct: 703 SHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGR 762
Query: 271 EAYDFITNM----KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL---DCRSADSGTYV 323
EA + M K+ PD + ++LS C G G +I ++ D + Y
Sbjct: 763 EAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYG 822
Query: 324 LLSNAYASSGKWKEAVQIRAKM 345
+ + + +G+ +EA + KM
Sbjct: 823 CVVDLFGRAGRVEEAFEFIKKM 844
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/493 (38%), Positives = 301/493 (61%), Gaps = 10/493 (2%)
Query: 6 HGQVLKL-------GLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPEC---NDVVASTV 55
HG+ L L G + + T ++ ++ + + + M+L +DV +
Sbjct: 154 HGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSS 213
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+I+ Y + + +VF + V+D + W +M+ G +NG + AL LFR M ++P
Sbjct: 214 LIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPM 273
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
VT ++ AC L +L LG+ +H+Y+ + D N + +LI+MY +CG++ A ++F+
Sbjct: 274 PVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFD 333
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
++ D+ ++ ++I G A+HG + EA+ +F M ++P +TF+ VL ACSH GLVD
Sbjct: 334 RIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDK 393
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G++ F SM+ YGI P +EH+ + D L R G+ EEAY+FI+ MKI P + +LL AC
Sbjct: 394 GWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRAC 453
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
K+H L E++AK++ D G++++LSN Y+SSG+W EA +R M++ G+QKEP
Sbjct: 454 KVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSGRWNEAAHLRKSMRKKGMQKEPA 513
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
CS IEV N+ H F+ D HP E+I + + + +GY P+T+ V DIE+ +K
Sbjct: 514 CSWIEVKNKQHVFVAHDKSHPWYERIIDALNVFSEQMVRQGYVPNTDDVFQDIEEEQKNS 573
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
L HSE+LAI +G+IST P TTIRV+KNLRVC DCH++ K I+ I R+I++RD NRFH
Sbjct: 574 VLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHTVTKFISKIVGREIVMRDANRFH 633
Query: 476 HFENGTCSCGDYW 488
HF++G CSCGD+W
Sbjct: 634 HFKDGICSCGDFW 646
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 141/299 (47%), Gaps = 20/299 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H L+ G ++R L+ LY K PE + S V++
Sbjct: 77 GASLHALALRSGAFADRFAANALLNLYCKLPAPPS------HSPEMD---GSAVVL---- 123
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
E+ +VF + KD V W ++ G +G AL L REM RD +P+ T+
Sbjct: 124 -----ESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSS 178
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL ++ + G +H + ++ + VG +LI+MY+ C D +++VF+ + RD
Sbjct: 179 VLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRD 238
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+NS++AG A +G EA+ +FR M++ GI+P VTF ++ AC + + LG ++
Sbjct: 239 AILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHA 298
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ R G + + ++D+ + G A ++ +PD + +++ +HG
Sbjct: 299 YVIRG-GFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQ-SPDIVSWTAMIMGHALHGP 355
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 109/247 (44%), Gaps = 20/247 (8%)
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC----VLSACSQLGALELGRWIH 139
W I G+ A+ LF M+ + +++ L +C+ LG LG +H
Sbjct: 22 WAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASLH 81
Query: 140 SYMGKHRIDLNHIVGGALINMY-------SRCGDIDKAL-------QVFEEMKERDVTTY 185
+ + + AL+N+Y S ++D + +VF+EM E+DV ++
Sbjct: 82 ALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVSW 141
Query: 186 NSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR 245
N+L+ G A GR EA+ + REM G +P T VL + G V G E+ TR
Sbjct: 142 NTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFATR 201
Query: 246 DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGE 305
+ G + ++D+ + R + + N+ + D I+ S+L+ C +G +
Sbjct: 202 N-GFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVR-DAILWNSMLAGCAQNGSVDEAL 259
Query: 306 QIAKRLL 312
+ +R+L
Sbjct: 260 GLFRRML 266
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 38/213 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H V++ G N L+++Y KCG A ++FD + + D+V+ T MI +
Sbjct: 293 GKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRI-QSPDIVSWTAMIMGHA 351
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG A +F R M+ N++PN +T +
Sbjct: 352 LHGPAREALVLFDR-------------------------------MELGNLKPNHITFLA 380
Query: 122 VLSACSQLGALELGRWIHSYMGKHR---IDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
VL+ACS G ++ G + M H L H AL + R G +++A MK
Sbjct: 381 VLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEH--HAALADTLGRPGKLEEAYNFISGMK 438
Query: 179 -ERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
+ + +++L+ +H ++ A E+ +++ +
Sbjct: 439 IKPTASVWSTLLRACKVHKNTVLAEEVAKKIFD 471
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/487 (40%), Positives = 304/487 (62%), Gaps = 1/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H ++ G + + L+ +Y KCG + ++F M +C D V+ MIN Y+
Sbjct: 241 GKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGM-KCKDSVSWNSMINVYI 299
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++G + ++ +VF +K +D + W +I V + + L + M+ + V P+ T++
Sbjct: 300 QNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLS 359
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L CS L A G+ IH + K ++ + VG LI MYS+CG + + QVF+ MK +D
Sbjct: 360 ILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKD 419
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V T+ +LI+ M+G +AV F EM GI P V FV ++ ACSH GLV+ G F
Sbjct: 420 VVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFH 479
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M +DY IEP+IEHY C+VDLLSR ++A DFI +M + PD + G+LLSAC++ G
Sbjct: 480 RMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDT 539
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++ E++++R+++ D+G YVL+SN YA+ GKW + IR +K G++K+PGCS +E+
Sbjct: 540 EIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEI 599
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N+++ F G Q E++ K + L ++ EGY + + VLHDI++ EK L HS
Sbjct: 600 QNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHS 659
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ERLAI +GL++TKP T ++V+KNLRVC DCH++ K I+ I +R+++VRD NRFH F++G
Sbjct: 660 ERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDANRFHVFKDGA 719
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 720 CSCGDYW 726
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 131/262 (50%), Gaps = 11/262 (4%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTV-CWTAMIDGLVRNGEMARALDLFRE 106
+ V+ S +I Y ++F VF + V W ++I L NG + AL L+ E
Sbjct: 46 HSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSE 105
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
QR ++P+ T V++AC+ L E+ + IH + + +G ALI+MY R D
Sbjct: 106 TQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFND 165
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE-------MFREMINQGIRPTKVT 219
+DKA +VFEEM RDV ++NSLI+G +G EA+E +F EM+NQ +P +T
Sbjct: 166 LDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQ-FKPDLLT 224
Query: 220 FVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM 279
+L AC H G ++ G + M G E ++++ ++ G + + + M
Sbjct: 225 ITSILQACGHLGDLEFGKYVHDYMITS-GYECDTTASNILINMYAKCGNLLASQEVFSGM 283
Query: 280 KIAPDHIMLGSLLSACKIHGKL 301
K D + S+++ +GK+
Sbjct: 284 K-CKDSVSWNSMINVYIQNGKM 304
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 175/363 (48%), Gaps = 22/363 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFD---EMPECNDVVASTVMI 57
E ++ + ++ L+ + T ++ +F+ A + D +M +D+ +I
Sbjct: 98 EALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALI 157
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALD-------LFREMQRD 110
+ Y ++ A +VF + ++D V W ++I G NG AL+ LF EM +
Sbjct: 158 DMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMV-N 216
Query: 111 NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
+P+ +TI +L AC LG LE G+++H YM + + LINMY++CG++ +
Sbjct: 217 QFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLAS 276
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
+VF MK +D ++NS+I +G+ +++++F M + I +T+ ++ +C H
Sbjct: 277 QEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDI----ITWNTIIASCVHS 332
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIV---DLLSRVGRPEEAYDFITNMKIAPDHIM 287
+LG + M R G+ P + I+ LL+ + +E + I + + D +
Sbjct: 333 EDCNLGLRMISRM-RTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPV 391
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
L+ G L+ Q+ K + ++ D T+ L +A G+ K+AV+ +M+
Sbjct: 392 GNVLIEMYSKCGSLRNSFQVFKLM---KTKDVVTWTALISACGMYGEGKKAVRAFGEMEA 448
Query: 348 AGV 350
AG+
Sbjct: 449 AGI 451
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/491 (40%), Positives = 303/491 (61%), Gaps = 5/491 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+ H Q +L ++++Y KCG A ++FDEMPE DV++ T +I Y
Sbjct: 169 GRQFHAQTFRLRGFCFVYVGNTMIDMYVKCGSIVCARKVFDEMPE-RDVISWTELIAAYA 227
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G +E+A ++F + KD V WTAM+ G +N + AL+ F M++ +R +EVT+
Sbjct: 228 RVGNMESAADLFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAG 287
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIV-GGALINMYSRCGDIDKALQVFEEMKE 179
+SAC+QLGA + R + +H+V G ALI+MYS+CG++++A+ VF M
Sbjct: 288 YISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFVSMNN 347
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ-GIRPTKVTFVGVLNACSHGGLVDLGFE 238
++V +Y+S+I GLA HGR+ EA+++F M+ Q I+P VTFVG L ACSH GLVD G +
Sbjct: 348 KNVFSYSSMILGLATHGRAQEALDLFHYMVTQTAIKPNTVTFVGALTACSHSGLVDQGRQ 407
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
+F SM + +G+EP +HY C+VDLL R GR +EA + I M + P + G+LL AC+IH
Sbjct: 408 VFASMYQTFGVEPTRDHYTCMVDLLGRAGRLQEALELIKTMSVEPHGGVWGALLGACRIH 467
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS- 357
+ E A+ L + G Y+LLSN Y+S+G W + +R +KE G++K P S
Sbjct: 468 NNPDIAEIAAEHLFELEPDIIGNYILLSNVYSSAGDWGGVLSVRKLIKEKGLKKTPAVSW 527
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
++ N ++H+F G++ HP ++I K++EL + + GY P V +D+ D K L
Sbjct: 528 VVDKNGQMHKFFPGNLNHPMSKKIQDKLEELVERLTALGYQPDLSSVPYDVSDNAKRLIL 587
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
H+E+LA+ + L++T TI+++KNLR+C DCH ++L + +T R II+RD RFHHF
Sbjct: 588 IQHTEKLALAFSLLTTNRDYTIKIMKNLRMCQDCHMFMRLASEVTGRVIIMRDNMRFHHF 647
Query: 478 ENGTCSCGDYW 488
+G CSCGD+W
Sbjct: 648 RSGACSCGDFW 658
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 152/382 (39%), Gaps = 69/382 (18%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
++IHG VL+ GL + KL+ K G D P
Sbjct: 67 KQIHGHVLRKGLDQSCYILTKLIRTLTKLG------VPMDPYPR---------------- 104
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
V V+ ++ WTA+I G G+ A+ ++ M+++ + P T +
Sbjct: 105 --------RVIEPVQFRNPFLWTAVIRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSAL 156
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L AC +G L LGR H+ + R VG +I+MY +CG I A +VF+EM ERDV
Sbjct: 157 LKACGSMGDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCGSIVCARKVFDEMPERDV 216
Query: 183 TTYNSLIA-------------------------------GLAMHGRSIEAVEMFREMINQ 211
++ LIA G A + + EA+E F M
Sbjct: 217 ISWTELIAAYARVGNMESAADLFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKS 276
Query: 212 GIRPTKVTFVGVLNACSHGG---LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGR 268
GIR +VT G ++AC+ G D +I Q Y + ++D+ S+ G
Sbjct: 277 GIRADEVTVAGYISACAQLGASKYADRAVQIAQK--SGYSPSDHVVIGSALIDMYSKCGN 334
Query: 269 PEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRS--ADSGTYVLLS 326
EEA + +M + S++ HG+ Q + ++ + ++ T+V
Sbjct: 335 VEEAVNVFVSMN-NKNVFSYSSMILGLATHGRAQEALDLFHYMVTQTAIKPNTVTFVGAL 393
Query: 327 NAYASSGKWKEAVQIRAKMKEA 348
A + SG + Q+ A M +
Sbjct: 394 TACSHSGLVDQGRQVFASMYQT 415
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 125/299 (41%), Gaps = 40/299 (13%)
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG-DIDK-ALQVFE 175
+++ L C L + + IH ++ + +D + + LI ++ G +D +V E
Sbjct: 52 SLISKLDDCINLNQI---KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYPRRVIE 108
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
++ R+ + ++I G + G+ EA+ M+ M + I P TF +L AC G ++L
Sbjct: 109 PVQFRNPFLWTAVIRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSMGDLNL 168
Query: 236 GFEIFQSMTRDYGI------EPQIEHY---GCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
G + R G I+ Y G IV +V D I+ ++ +
Sbjct: 169 GRQFHAQTFRLRGFCFVYVGNTMIDMYVKCGSIV-CARKVFDEMPERDVISWTELIAAYA 227
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
+G++ SA + L + +A + + +A + K +EA++ +M+
Sbjct: 228 RVGNMESAADLFESLPTKDMVA-------------WTAMVTGFAQNAKPQEALEYFDRME 274
Query: 347 EAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVL 405
++G++ + EV + G I + K QI + GYSPS VV+
Sbjct: 275 KSGIRAD------EVT------VAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVI 321
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 183/438 (41%), Positives = 284/438 (64%)
Query: 51 VASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD 110
+ + +++ Y + G + AF+VF ++ KD + WT+++ G V NG AL LF EM+
Sbjct: 3 LVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIM 62
Query: 111 NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
+ P+++ I VLSAC++L LE G+ +H+ K + + V +L++MY++CG I+ A
Sbjct: 63 GIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDA 122
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
+VF+ M+ +DV T+ +LI G A +GR E++ + +MI G++P +TF+G+L ACSH
Sbjct: 123 NKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHA 182
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGS 290
GLV+ G FQSM YGI+P EHY C++DLL R G+ EA + + M + PD + +
Sbjct: 183 GLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKA 242
Query: 291 LLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
LL+AC++HG ++LGE+ A L + ++ YVLLSN Y+++GKW+EA + R MK GV
Sbjct: 243 LLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGV 302
Query: 351 QKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIED 410
KEPGCS IE+++++H F+ D HP+ +IY K+ E+ ++K GY P LHD+++
Sbjct: 303 SKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDE 362
Query: 411 WEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRD 470
KE LA HSE+LA+ +GL++ P IR+ KNLR+C DCH+ +K ++ + R +I+RD
Sbjct: 363 EGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRD 422
Query: 471 RNRFHHFENGTCSCGDYW 488
N FHHF G CSC DYW
Sbjct: 423 SNCFHHFREGACSCSDYW 440
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 34/197 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H LK GL S+ S LV +Y KCG +DA ++FD M E DV+
Sbjct: 87 GKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSM-EIQDVIT--------- 136
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
WTA+I G +NG +L+ + +M V+P+ +T +
Sbjct: 137 ----------------------WTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIG 174
Query: 122 VLSACSQLGALELGR-WIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
+L ACS G +E GR + S + I +I++ R G + +A ++ +M +
Sbjct: 175 LLFACSHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQ 234
Query: 180 RDVTTYNSLIAGLAMHG 196
D T + +L+A +HG
Sbjct: 235 PDATVWKALLAACRVHG 251
>gi|225452893|ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Vitis vinifera]
Length = 632
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/498 (41%), Positives = 315/498 (63%), Gaps = 13/498 (2%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G + HG ++K+GL ++++Y K G +A ++F EM + VV+ TV+++ +
Sbjct: 137 GAQGHGCMVKMGLGGVEKACNAVMDMYAKSGLMGEARRVFYEM-KGQSVVSWTVILDGVI 195
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTIV 120
V N VF + ++ V WT MI G + +G + L REM D + N VT+
Sbjct: 196 RSEGVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQESFALVREMIFDLEMELNYVTLC 255
Query: 121 CVLSACSQLGALELGRWIHSYMGKHR-IDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+L+ACSQ G L +GRW+H+Y K + +LN +VG A+++MY++CG I A + F++M +
Sbjct: 256 SILTACSQSGDLMMGRWVHAYALKTKEKELNIMVGTAMVDMYAKCGRIHIAFKFFKKMPQ 315
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
R+V ++N++++GLAMHG A+++F +M + +P VTF VL+ACSH GLVD G
Sbjct: 316 RNVVSWNAMLSGLAMHGLGRAALDIFPQMFKEA-KPDDVTFTSVLSACSHSGLVDQGCFY 374
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F ++ YGI P++EHY C+VDLL R GR EEA + M I P+ ++LGSLL +C IHG
Sbjct: 375 FGNLESVYGITPKVEHYACMVDLLGRAGRLEEAEILVREMPIRPNEVVLGSLLGSCSIHG 434
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
KLQLGE + + L+ ++ ++LLSN YA +GK A +R +K+ G++K PG SSI
Sbjct: 435 KLQLGEHLLQELVQLDPQNTEYHILLSNMYALAGKQNRANSLRQVLKKRGIKKVPGMSSI 494
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEV-------VLHD--IED 410
V ++H+F GD HP+ ++Y + E+ ++L GY+P+T + L D +E
Sbjct: 495 HVGGQVHQFSAGDKSHPRTREVYNMLDEMIPRLRLAGYAPNTALQTFAGCDSLEDDLVEQ 554
Query: 411 WEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRD 470
EKE AL HSE+LAIC+GLIST P + + KNLR+C DCHS IK+++ I R+I++RD
Sbjct: 555 EEKEQALFSHSEKLAICFGLISTGPGVPLHIFKNLRICQDCHSAIKIVSKIYNREIVIRD 614
Query: 471 RNRFHHFENGTCSCGDYW 488
RNRFH F+ G+CSC DYW
Sbjct: 615 RNRFHCFKEGSCSCCDYW 632
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 152/367 (41%), Gaps = 67/367 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRL--KLVELYGKCGEFKDAMQLFDEMPECN-DVVASTVMIN 58
G +H ++ G+ T L L++ Y CG A ++FDE+P + D V T ++
Sbjct: 32 GERLHATIITTGIAGAPETFLHNALLQFYASCGCAWQARKVFDEIPHSHKDTVDWTTLMG 91
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVT 118
C+V H + + AL +F EM+R V+P+EVT
Sbjct: 92 CFVRHNVSDE-------------------------------ALLIFVEMRRCGVKPDEVT 120
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
+VC+ C++LG + +G H M K + A+++MY++ G + +A +VF EMK
Sbjct: 121 LVCLFGGCARLGDVVVGAQGHGCMVKMGLGGVEKACNAVMDMYAKSGLMGEARRVFYEMK 180
Query: 179 -------------------------------ERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
ER+ + +IAG G + E+ + RE
Sbjct: 181 GQSVVSWTVILDGVIRSEGVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQESFALVRE 240
Query: 208 MI-NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRV 266
MI + + VT +L ACS G + +G + + E I +VD+ ++
Sbjct: 241 MIFDLEMELNYVTLCSILTACSQSGDLMMGRWVHAYALKTKEKELNIMVGTAMVDMYAKC 300
Query: 267 GRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLS 326
GR A+ F M + + ++LS +HG + I ++ D T+ +
Sbjct: 301 GRIHIAFKFFKKMP-QRNVVSWNAMLSGLAMHGLGRAALDIFPQMFKEAKPDDVTFTSVL 359
Query: 327 NAYASSG 333
+A + SG
Sbjct: 360 SACSHSG 366
>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/490 (40%), Positives = 296/490 (60%), Gaps = 4/490 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++H G ++ ++ +Y K G A ++FDEMP DVV T +I Y
Sbjct: 128 GSQLHLHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPH-RDVVTWTELIVAYA 186
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G +++A E+F + VKD V WT+M+ G +N +AL FR+M+ V +E+T+V
Sbjct: 187 RSGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVG 246
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDL--NHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+SAC+QLG WI R N VG ALI+MYS+CG++++A VF+ MKE
Sbjct: 247 AISACAQLGVSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKE 306
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+V +Y+S+I G A+HGR+ A+++F EM+ GI+P VTFVG+ ACSH G+V+ G ++
Sbjct: 307 MNVFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQL 366
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F +M YG+ P +HY C+ DLL R G E+A + M + P+ + G+LL A IHG
Sbjct: 367 FGAMKECYGVSPTADHYACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGALLGASHIHG 426
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+ E ++ L + + G Y+LLS YA + KW + ++R M+E ++K PGCS +
Sbjct: 427 NPDVAEIASRSLFELEPDNLGNYLLLSKTYALAAKWDDVSRVRKLMREKQLRKNPGCSWV 486
Query: 360 EVNNE-IHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALA 418
E N IHEF GD++HP+ +I K + +L Q +K GY P V +DI+D K L
Sbjct: 487 EAKNGIIHEFFAGDVKHPEINEIKKALDDLLQRLKCTGYQPKLNSVPYDIDDEGKRCLLV 546
Query: 419 IHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFE 478
HSE+LA+ YGL+ST +TI+++KNLR+C DCH ++ + +T RKIIVRD RFHHF
Sbjct: 547 SHSEKLALAYGLLSTDAGSTIKIMKNLRICEDCHIVMCGASKLTGRKIIVRDNMRFHHFL 606
Query: 479 NGTCSCGDYW 488
NG CSC ++W
Sbjct: 607 NGACSCNNFW 616
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 139/344 (40%), Gaps = 75/344 (21%)
Query: 72 VFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGA 131
+FS+V + ++A+I RNG ++ L+ M +NV P T + S L
Sbjct: 68 LFSQVHSPNPFLYSALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALFSL---LKN 124
Query: 132 LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT------- 184
LG +H + + VG +I+MY + G +D A +VF+EM RDV T
Sbjct: 125 PSLGSQLHLHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVA 184
Query: 185 ------------------------YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTF 220
+ S++ G + + +A++ FR+M G+ ++T
Sbjct: 185 YARSGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITL 244
Query: 221 VGVLNACSH---GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFIT 277
VG ++AC+ G D EI +S +G + ++D+ S+ G EEAY+
Sbjct: 245 VGAISACAQLGVSGYADWIREIAES--SRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFK 302
Query: 278 NMK----------------------------------IAPDHIMLGSLLSACKIHGKLQL 303
MK I P+H+ L +AC G ++
Sbjct: 303 GMKEMNVFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQ 362
Query: 304 GEQIAKRLLDCR--SADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
G+Q+ + +C S + Y +++ +G ++A+Q+ M
Sbjct: 363 GQQLFGAMKECYGVSPTADHYACMADLLGRAGHLEKALQLVQTM 406
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/489 (40%), Positives = 295/489 (60%), Gaps = 34/489 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +IH ++L+ G +S+ L++LY C +F++A ++FDE+P+
Sbjct: 187 GLQIHARILRDGHQSDNLLLTTLMDLYSCCDKFEEACKVFDEIPQW-------------- 232
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR--DNVRPNEVTI 119
DTV W +I + N AL +F MQ D P++VT
Sbjct: 233 ------------------DTVSWNVLISCCIHNRRTRDALRMFDIMQSTADGFEPDDVTC 274
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+ +L AC+ LGALE G +H+Y+ +H D + +LI MYSRCG ++KA +F+ M E
Sbjct: 275 LLLLQACANLGALEFGERVHNYIEEHGYDGALNLCNSLITMYSRCGRLEKAYSIFKRMDE 334
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
R+V +++++I+G AMHG EA+E F +M G+ P T GVL+ACSH GLVD G
Sbjct: 335 RNVVSWSAMISGFAMHGYGREAIEAFEQMQQLGVSPDDQTLTGVLSACSHCGLVDDGLMF 394
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F M++ +GIEP I HYGC+VDLL R G ++AY I +M I PD + +LL AC+IH
Sbjct: 395 FDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQAYQLIMSMVIKPDSTLWRTLLGACRIHR 454
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
LGE++ L++ ++ ++G YVLL N Y+S G W + +R MKE G+Q PGCS+I
Sbjct: 455 HATLGERVIGHLIELKAQEAGDYVLLLNIYSSVGNWDKVTDLRKFMKEKGIQTSPGCSTI 514
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E+ ++HEF++ DI HP+ ++IY+ + E+ + +K+ GY LH++ EK L+
Sbjct: 515 ELKGKVHEFVVDDILHPRTDEIYEMLDEIGKQLKIAGYVAELSSELHNLGAEEKGNRLSY 574
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +G+++T P TTIRV KNLR+C DCH+ K+++ R++++RDR RFHHF
Sbjct: 575 HSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGAYNREVVIRDRTRFHHFRE 634
Query: 480 GTCSCGDYW 488
G CSC YW
Sbjct: 635 GQCSCNGYW 643
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 117/231 (50%), Gaps = 4/231 (1%)
Query: 71 EVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLG 130
+VFS++ + MI + + L+REM+R V PN ++ V+ +C ++
Sbjct: 123 QVFSQIMKPSGSQYNVMIRAYSMSHSPEQGFYLYREMRRRGVPPNPLSSSFVMKSCIRIS 182
Query: 131 ALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIA 190
+L G IH+ + + ++++ L+++YS C ++A +VF+E+ + D ++N LI+
Sbjct: 183 SLMGGLQIHARILRDGHQSDNLLLTTLMDLYSCCDKFEEACKVFDEIPQWDTVSWNVLIS 242
Query: 191 GLAMHGRSIEAVEMFREM--INQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYG 248
+ R+ +A+ MF M G P VT + +L AC++ G ++ G E + ++G
Sbjct: 243 CCIHNRRTRDALRMFDIMQSTADGFEPDDVTCLLLLQACANLGALEFG-ERVHNYIEEHG 301
Query: 249 IEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+ + ++ + SR GR E+AY M + + +++S +HG
Sbjct: 302 YDGALNLCNSLITMYSRCGRLEKAYSIFKRMD-ERNVVSWSAMISGFAMHG 351
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 106/240 (44%), Gaps = 10/240 (4%)
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALIN--MYSRCGDIDKALQ 172
+E ++ ++ +CS+ L IH+++ + + NH + ++ S D+ + Q
Sbjct: 67 SENQLISLIKSCSKKTHL---LQIHAHIIRTSLIQNHFISLQFLSRAALSPSRDMGYSSQ 123
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
VF ++ + + YN +I +M + ++REM +G+ P ++ V+ +C
Sbjct: 124 VFSQIMKPSGSQYNVMIRAYSMSHSPEQGFYLYREMRRRGVPPNPLSSSFVMKSCIRISS 183
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLG 289
+ G +I + RD G + ++DL S + EEA +D I ++++
Sbjct: 184 LMGGLQIHARILRD-GHQSDNLLLTTLMDLYSCCDKFEEACKVFDEIPQWDTVSWNVLIS 242
Query: 290 SLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
+ + L++ + I + D D T +LL A A+ G + ++ ++E G
Sbjct: 243 CCIHNRRTRDALRMFD-IMQSTADGFEPDDVTCLLLLQACANLGALEFGERVHNYIEEHG 301
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/485 (41%), Positives = 295/485 (60%), Gaps = 33/485 (6%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
+HG V+K G + L++ Y KCG+ + ++FD M E
Sbjct: 1273 VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEE------------------ 1314
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTIVCVL 123
KD + W +MI ++G AL++F M R VR N VT+ VL
Sbjct: 1315 --------------KDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVL 1360
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
AC+ GAL G+ IH + K ++ N VG ++I+MY +CG ++ A + F+ MKE++V
Sbjct: 1361 LACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVK 1420
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
++ +++AG MHGR+ EA+++F +M+ G++P +TFV VL ACSH GLV+ G+ F +M
Sbjct: 1421 SWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAM 1480
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQL 303
Y IEP IEHYGC+VDL R G EAY+ I MK+ PD ++ GSLL AC+IH + L
Sbjct: 1481 KHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDL 1540
Query: 304 GEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNN 363
GE A++L + + G YVLLSN YA +G+W + ++R MK + K PG S +E+
Sbjct: 1541 GEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKG 1600
Query: 364 EIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSER 423
+H F++GD HP E IYK +++L ++ GY P+ VLHD+++ EKE L +HSE+
Sbjct: 1601 RVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEK 1660
Query: 424 LAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCS 483
LA+ +G++++ P TTI ++KNLRVC DCH++IKLI+ + R +VRD RFHHF++G CS
Sbjct: 1661 LAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCS 1720
Query: 484 CGDYW 488
CGDYW
Sbjct: 1721 CGDYW 1725
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 169/272 (62%), Gaps = 1/272 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +HG ++K G + + L++ Y KCG + A+++F++M +VV+ T +I+ +
Sbjct: 144 GKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKM-RVRNVVSWTTVISGLI 202
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G ++ A +F + K+ V WTAMI+G +RN + AL+LF+ MQ +N+ PNE T+V
Sbjct: 203 SCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVS 262
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
++ AC+++G L LGR IH Y K+ I++ +G ALI+MYS+CG I A++VFE M +
Sbjct: 263 LIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKS 322
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ T+NS+I L +HG EA+ +F EM ++P +TF+GVL AC H V G F
Sbjct: 323 LPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFT 382
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAY 273
MT+ YGI P EHY C+ +L +R +EA+
Sbjct: 383 RMTQHYGIAPIPEHYECMTELYARSNNLDEAF 414
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 170/382 (44%), Gaps = 60/382 (15%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
GR H Q G ++ L+++Y KCG+ KDA LFDE+P +VV+ T MI Y
Sbjct: 1160 SGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIP-LRNVVSWTSMITGY 1218
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V++ +NA +F ++ T + DG +NV + V +V
Sbjct: 1219 VQNEQADNALLLFKDFLEEE----TEVEDG-------------------NNVPLDSVVMV 1255
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSACS++ + +H ++ K D + VG L++ Y++CG + +VF+ M+E+
Sbjct: 1256 SVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEK 1315
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQ-GIRPTKVTFVGVLNACSHGGLV------ 233
D ++NS+IA A G S EA+E+F M+ G+R VT VL AC+H G +
Sbjct: 1316 DDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCI 1375
Query: 234 -------DLGFEI-----------------FQSMTRDYGIEPQIEHYGCIVDLLSRVGRP 269
DL + + T D E ++ + +V GR
Sbjct: 1376 HDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRA 1435
Query: 270 EEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT--YVL 324
+EA D M + P++I S+L+AC G ++ G + + G Y
Sbjct: 1436 KEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGC 1495
Query: 325 LSNAYASSGKWKEAVQIRAKMK 346
+ + + +G EA + +MK
Sbjct: 1496 MVDLFGRAGCLNEAYNLIKRMK 1517
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 151/324 (46%), Gaps = 51/324 (15%)
Query: 23 KLVELYGKCGEFKDAMQLFDEMPEC---NDVVASTVMINCYVEHGLVENAFEVFSRVKVK 79
K + L C FK Q+ ++ ND + + +I+ Y HG + A +F +++
Sbjct: 29 KALFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNP 88
Query: 80 DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIH 139
T W +I NG +AL L++ M + ++ T V+ AC+ +++LG+ +H
Sbjct: 89 CTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVH 148
Query: 140 SYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHG--- 196
+ K+ + V LI+ Y +CG AL+VFE+M+ R+V ++ ++I+GL G
Sbjct: 149 GSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQ 208
Query: 197 --RSI--------------------------EAVEMFREMINQGIRPTKVTFVGVLNACS 228
R I EA+E+F+ M + I P + T V ++ AC+
Sbjct: 209 EARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACT 268
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIE---HYG-CIVDLLSRVGRPEEAYDFITNM--KIA 282
G++ LG I DY I+ IE + G ++D+ S+ G ++A + M K
Sbjct: 269 EMGILTLGRGI-----HDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSL 323
Query: 283 PDHIMLGSLLSACKIHGKLQLGEQ 306
P S++++ +HG LG++
Sbjct: 324 P---TWNSMITSLGVHG---LGQE 341
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 137/342 (40%), Gaps = 74/342 (21%)
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W ++I L R G+ AL F +++ + P + C + +CS L L GR H
Sbjct: 1110 WNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAF 1169
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
+ + V ALI+MYS+CG + A +F+E+ R+V ++ S+I G + ++ A+
Sbjct: 1170 VFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALL 1229
Query: 204 MFREMINQ--------GIRPTKVTFVGVLNACS-----------HGGLVDLGFE------ 238
+F++ + + + V V VL+ACS HG +V GF+
Sbjct: 1230 LFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVG 1289
Query: 239 -------------IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM----KI 281
+ D+ E + ++ + ++ G EA + M +
Sbjct: 1290 NTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGV 1349
Query: 282 APDHIMLGSLLSACKIHGKLQLGE-------------------------------QIAKR 310
+ + L ++L AC G L+ G+ ++AK+
Sbjct: 1350 RYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKK 1409
Query: 311 LLD-CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
D + + ++ + Y G+ KEA+ I KM AGV+
Sbjct: 1410 TFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVK 1451
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 170 ALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH 229
A ++ + + +V ++NS+IA LA G S+EA+ F + G+ PT+ +F + +CS
Sbjct: 1095 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCS- 1153
Query: 230 GGLVDL-GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
L DL + +G E + ++D+ S+ G+ ++A
Sbjct: 1154 -ALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDA 1196
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/465 (43%), Positives = 282/465 (60%), Gaps = 1/465 (0%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
+V Y CG+ A++ F P V+ T MI Y++ G VE A +F + ++ V
Sbjct: 172 MVSGYVACGDLDAAVECFYAAP-MRSVITWTAMITGYMKFGRVELAERLFQEMSMRTLVT 230
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W AMI G V NG L LFR M V+PN +++ VL CS L AL+LG+ +H +
Sbjct: 231 WNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 290
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
K + + G +L++MYS+CGD+ A ++F ++ +DV +N++I+G A HG +A+
Sbjct: 291 KCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALR 350
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
+F EM +G++P +TFV VL AC+H GLVDLG + F +M RD+GIE + EHY C+VDLL
Sbjct: 351 LFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLL 410
Query: 264 SRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV 323
R G+ EA D I +M P + G+LL AC+IH L L E AK LL+ + YV
Sbjct: 411 GRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELDPTIATGYV 470
Query: 324 LLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYK 383
L+N YA+ +W IR MK+ V K PG S IE+N+ +H F D HP+ I++
Sbjct: 471 QLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLHPELASIHE 530
Query: 384 KMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVK 443
K+++L++ +KL GY P E VLHD+ + KE L HSE+LAI +GL+ IRV K
Sbjct: 531 KLKDLEKKMKLAGYVPDLEFVLHDVGEELKEQLLLWHSEKLAIAFGLLKVPLGVPIRVFK 590
Query: 444 NLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
NLRVC DCHS K I+ I R+IIVRD RFHHF++G CSC DYW
Sbjct: 591 NLRVCGDCHSATKYISTIEGREIIVRDTTRFHHFKDGFCSCRDYW 635
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 34/196 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H V K L S+ + LV +Y KCG+ KDA +LF ++P DVV MI+ Y
Sbjct: 282 GKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPR-KDVVCWNAMISGYA 340
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+HG + +AL LF EM+++ ++P+ +T V
Sbjct: 341 QHGAGK-------------------------------KALRLFDEMKKEGLKPDWITFVA 369
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL AC+ G ++LG ++ ++ I+ ++++ R G + +A+ + + M +
Sbjct: 370 VLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFK 429
Query: 181 D-VTTYNSLIAGLAMH 195
Y +L+ +H
Sbjct: 430 PHPAIYGTLLGACRIH 445
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 125/280 (44%), Gaps = 53/280 (18%)
Query: 132 LELGRWIHSYMGKHRIDLNHIVGG-ALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIA 190
+ L +++ S+ +H + N+++ LI Y RCGDID A++VFE+MK + T+NS++A
Sbjct: 21 VTLSKYVSSHTHQHEFNNNNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILA 80
Query: 191 GLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC--SHGGLVDL-GFEIFQSMTRDY 247
A E E I Q P V++ ++ AC H G+ D GF F SM
Sbjct: 81 AFAKKPGHFEYARQLFEKIPQ---PNTVSY-NIMLACHWHHLGVHDARGF--FDSMPLK- 133
Query: 248 GIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---------IAPDHIMLGSLLSACK-- 296
+ + ++ L++VG EA + M + ++ G L +A +
Sbjct: 134 ----DVASWNTMISALAQVGLMGEARRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECF 189
Query: 297 --------------IHGKLQLGE-QIAKRLLDCRSADS-GTYVLLSNAYASSGKWKEAVQ 340
I G ++ G ++A+RL S + T+ + Y +G+ ++ ++
Sbjct: 190 YAAPMRSVITWTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLR 249
Query: 341 IRAKMKEAGVQKEP--------GC---SSIEVNNEIHEFI 369
+ M E GV+ GC S++++ ++H+ +
Sbjct: 250 LFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLV 289
>gi|298205169|emb|CBI17228.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/419 (46%), Positives = 279/419 (66%), Gaps = 10/419 (2%)
Query: 80 DTVCWTAMIDGLVRNGEMARALDLFREMQRDN----------VRPNEVTIVCVLSACSQL 129
D+ +++D V+ GE+ L LF E + N VRPN++T+V L AC+++
Sbjct: 172 DSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNGVRPNDLTVVSALLACTKI 231
Query: 130 GALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLI 189
GAL++G IH+Y+ + LN +G AL++MY++CG+I A +VF E K +D+ T++ +I
Sbjct: 232 GALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMI 291
Query: 190 AGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGI 249
G A+HG +A++ F +M + GI P +V F+ +L ACSH G VD G F+SM DY I
Sbjct: 292 WGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSI 351
Query: 250 EPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAK 309
EP ++HY IVDLL R GR +EA FI +M I PD ++ G+L AC+ H +++ E A+
Sbjct: 352 EPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAE 411
Query: 310 RLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFI 369
+LL G+YV LSN YA+ G+W++ ++R MK GV+K+PG S IEV ++H F+
Sbjct: 412 KLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSFV 471
Query: 370 LGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYG 429
GD H + E+I K++E+ K EGY P T VLH+IE+ EKE AL HSE+LA+ +G
Sbjct: 472 AGDHAHVRAEEISLKLEEITASAKQEGYMPETAWVLHNIEEEEKEDALGSHSEKLALAFG 531
Query: 430 LISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
LIST P +TIR+VKNLRVC DCHSM+K + +++R+II+RD RFHHF++GTCSCGDYW
Sbjct: 532 LISTAPGSTIRIVKNLRVCGDCHSMMKYASKLSRREIILRDIKRFHHFKDGTCSCGDYW 590
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 112/260 (43%), Gaps = 51/260 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPE--------------C 47
GR +HG V+KLGL + R+ LV++Y K GE +QLFDE P+
Sbjct: 157 GRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNGVRP 216
Query: 48 NDVVASTVMINC----------------------------------YVEHGLVENAFEVF 73
ND+ + ++ C Y + G +++A VF
Sbjct: 217 NDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVF 276
Query: 74 SRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALE 133
K KD + W+ MI G +G +AL F +M+ + P+EV + +L+ACS G ++
Sbjct: 277 VETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVD 336
Query: 134 LG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-ERDVTTYNSLIAG 191
G + S + I+ ++++ R G +D+AL + M D + +L
Sbjct: 337 QGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCA 396
Query: 192 LAMHGRSIEAVEMFREMINQ 211
H ++IE E+ E + Q
Sbjct: 397 CRAH-KNIEMAELTAEKLLQ 415
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 130/304 (42%), Gaps = 59/304 (19%)
Query: 50 VVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
VV + +C ++ ++ A +F + + A+I GL N ++ F M R
Sbjct: 74 VVTQLISSSCSLKS--LDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLR 131
Query: 110 DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDK 169
++RP+ +T+ VL + + L + LGR +H + K ++ + V +L++MY + G++
Sbjct: 132 LSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGF 191
Query: 170 ALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH 229
LQ+F+E +R+ SI ++ G+RP +T V L AC+
Sbjct: 192 GLQLFDESPQRN-------------KAESI--------LLWNGVRPNDLTVVSALLACTK 230
Query: 230 GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLG 289
G + +G I ++ + G + +VD+ ++ G N+K A
Sbjct: 231 IGALQVGERIHNYLSSN-GFQLNRGIGTALVDMYAKCG----------NIKSA------- 272
Query: 290 SLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
++ ++ + D T+ ++ +A G + +A+Q KMK AG
Sbjct: 273 ------------------SRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAG 314
Query: 350 VQKE 353
+ +
Sbjct: 315 INPD 318
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 107/248 (43%), Gaps = 18/248 (7%)
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
R E + ++ A + L L IH+ + H + N V LI+ +D AL
Sbjct: 37 RSPETHFIPLIHASNTLPQLH---QIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALS 93
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA------ 226
+F ++ +N+LI GLA + R +V F M+ IRP ++T VL +
Sbjct: 94 IFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVD 153
Query: 227 -----CSHGGLVDLGFEIFQSMTRDYGIE--PQIEHYGCIVDLLSRVGRPEEAYDFITNM 279
C HGG++ LG E F S R ++ +I G + L + +A +
Sbjct: 154 VGLGRCLHGGVMKLGLE-FDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWN 212
Query: 280 KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL-LDCRSADSGTYVLLSNAYASSGKWKEA 338
+ P+ + + S L AC G LQ+GE+I L + + G L + YA G K A
Sbjct: 213 GVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSA 272
Query: 339 VQIRAKMK 346
++ + K
Sbjct: 273 SRVFVETK 280
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/493 (41%), Positives = 292/493 (59%), Gaps = 6/493 (1%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMP----ECNDVVASTVM 56
E ++ Q+ G++ R T L L+ + D + +++ + N +A+ +M
Sbjct: 414 EAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALM 473
Query: 57 INCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
N Y G + A VF + +D + W +MI G ++G A LF+EMQ + + P+
Sbjct: 474 -NMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDN 532
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
+T VLS C ALELG+ IH + + + L+ +G ALINMY RCG + A VF
Sbjct: 533 ITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHS 592
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTK-VTFVGVLNACSHGGLVDL 235
++ RDV ++ ++I G A G ++A+E+F +M N+G RP TF +L+AC+H GLV
Sbjct: 593 LQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLE 652
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G++IF SM +YG+ P IEHYGC+V LL R R +EA I M PD + +LL AC
Sbjct: 653 GYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGAC 712
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
+IHG + L E A L + + Y+LLSN YA++G+W + +IR M+ G++KEPG
Sbjct: 713 RIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPG 772
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
S IEV+N IHEFI D HP+ +IY +++ L ++ GY P T+ VLHD+ +E
Sbjct: 773 RSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQET 832
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
+L HSERLAI YGLI T P T IR+ KNLR+C DCH+ K I+ + R+II RD NRFH
Sbjct: 833 SLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFH 892
Query: 476 HFENGTCSCGDYW 488
F+NG CSC DYW
Sbjct: 893 SFKNGKCSCEDYW 905
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 175/348 (50%), Gaps = 42/348 (12%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCG---EFKDAMQLFDEMPECNDVVASTVMINCYV 61
+ GQ+ G+ ++ T + L++ + E K +L E +D+ T ++ V
Sbjct: 216 LFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCV 275
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G V++A + F + +D V + A+I L ++G A + + M+ D V N T +
Sbjct: 276 RCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLS 335
Query: 122 VLSACSQLGALELGRWIHSYMGK--HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+L+ACS ALE G+ IHS++ + H D+ +G ALI+MY+RCGD+ KA ++F M +
Sbjct: 336 ILNACSTSKALEAGKLIHSHISEDGHSSDVQ--IGNALISMYARCGDLPKARELFYTMPK 393
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
RD+ ++N++IAG A EA+ ++++M ++G++P +VTF+ +L+AC++ G I
Sbjct: 394 RDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMI 453
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA--------------------------- 272
+ + R GI+ ++++ R G EA
Sbjct: 454 HEDILRS-GIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGS 512
Query: 273 -------YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
+ + N ++ PD+I S+LS CK L+LG+QI R+ +
Sbjct: 513 YETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITE 560
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 174/346 (50%), Gaps = 12/346 (3%)
Query: 13 GLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPE---CNDVVASTVMINCYVEHGLVENA 69
G+ NR+T L ++ + + + E +DV +I+ Y G + A
Sbjct: 325 GVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKA 384
Query: 70 FEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQL 129
E+F + +D + W A+I G R + A+ L+++MQ + V+P VT + +LSAC+
Sbjct: 385 RELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANS 444
Query: 130 GALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLI 189
A G+ IH + + I N + AL+NMY RCG + +A VFE + RDV ++NS+I
Sbjct: 445 SAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMI 504
Query: 190 AGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGI 249
AG A HG A ++F+EM N+ + P +TF VL+ C + ++LG +I +T + G+
Sbjct: 505 AGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRIT-ESGL 563
Query: 250 EPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK----LQLGE 305
+ + ++++ R G ++A + +++ D + +++ C G+ ++L
Sbjct: 564 QLDVNLGNALINMYIRCGSLQDARNVFHSLQ-HRDVMSWTAMIGGCADQGEDMKAIELFW 622
Query: 306 QIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK-EAGV 350
Q+ R D T+ + +A +G E QI + M+ E GV
Sbjct: 623 QMQNEGF--RPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGV 666
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 173/338 (51%), Gaps = 6/338 (1%)
Query: 16 SNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMINCYVEHGLVENAFEV 72
++R+T + L++ + +A ++ +M E D+ S ++IN YV+ V +A +V
Sbjct: 25 TDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQV 84
Query: 73 FSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGAL 132
F + +D + W ++I + G +A LF EMQ PN++T + +L+AC L
Sbjct: 85 FKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAEL 144
Query: 133 ELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGL 192
E G+ IHS + K + V +L++MY +CGD+ +A QVF + RDV +YN+++
Sbjct: 145 ENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLY 204
Query: 193 AMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQ 252
A E + +F +M ++GI P KVT++ +L+A + ++D G I + +T + G+
Sbjct: 205 AQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHK-LTVEEGLNSD 263
Query: 253 IEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG-KLQLGEQIAKRL 311
I +V + R G + A + D ++ +L++A HG ++ EQ +
Sbjct: 264 IRVGTALVTMCVRCGDVDSAKQAFKGIA-DRDVVVYNALIAALAQHGHNVEAFEQYYRMR 322
Query: 312 LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
D + + TY+ + NA ++S + I + + E G
Sbjct: 323 SDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDG 360
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 135/278 (48%), Gaps = 33/278 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G++IH Q++K G + + + L+ +YGKCG+ A Q+F + DVV+ M+ Y
Sbjct: 147 GKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISP-RDVVSYNTMLGLYA 205
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ V+ L LF +M + + P++VT +
Sbjct: 206 QKAYVK-------------------------------ECLGLFGQMSSEGISPDKVTYIN 234
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L A + L+ G+ IH + ++ + VG AL+ M RCGD+D A Q F+ + +RD
Sbjct: 235 LLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRD 294
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V YN+LIA LA HG ++EA E + M + G+ + T++ +LNACS ++ G I
Sbjct: 295 VVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHS 354
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM 279
++ D G ++ ++ + +R G +A + M
Sbjct: 355 HISED-GHSSDVQIGNALISMYARCGDLPKARELFYTM 391
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/492 (41%), Positives = 306/492 (62%), Gaps = 7/492 (1%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
R I+ +++ +R + LV +Y G AM+ F +M ++ ST M++ Y +
Sbjct: 235 RAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKM-SVRNLFVSTAMVSGYSK 293
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
G +++A +F + ++KD VCWT MI + AL +F EM ++P+ VT++ V
Sbjct: 294 AGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSV 353
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
+SAC LG L+ +W+H Y + ++ + ALINMY++CG +D A VFE+M R+V
Sbjct: 354 ISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNV 413
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
+++S+I AMHG + +++ +F +M + + P +VTFVGVL CSH GLV+ G +IF S
Sbjct: 414 VSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFAS 473
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
MT +Y I P+IEHYGC+VDL R EA + I +M +AP+ ++ GSL+SAC++HG+L+
Sbjct: 474 MTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGELE 533
Query: 303 LGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVN 362
LGE AKR+L G VL+SN YA +W IR M++ V KE G S I++N
Sbjct: 534 LGELAAKRILKLEPDHDGALVLMSNIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDLN 593
Query: 363 NEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSE 422
+ HEF++GD RH Q +IY K+ E+ +KL GY P VL D+E+ EK+ + HSE
Sbjct: 594 GKSHEFLIGDKRHKQSNEIYTKLYEVVSKLKLAGYVPDGGSVLVDVEEEEKKDLVLWHSE 653
Query: 423 RLAICYGLISTKPYT------TIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHH 476
+LA+C+GL++ + IR+VKNLRVC DCH+ KL++ + + +IIVRDR RFH
Sbjct: 654 KLALCFGLMNKEKEEEKGSCGVIRIVKNLRVCEDCHAFFKLVSKVYELEIIVRDRTRFHR 713
Query: 477 FENGTCSCGDYW 488
+++G CSC DYW
Sbjct: 714 YKDGLCSCRDYW 725
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 167/355 (47%), Gaps = 18/355 (5%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG E+HG K+ S+ L+++Y CG A +FDEM + DVV MI Y
Sbjct: 132 EGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQ-RDVVTWNTMIERY 190
Query: 61 VEHGLVENAFEVFSRVK----VKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
GL++ AF++F +K + D + ++ R G M ++ + ++VR +
Sbjct: 191 CRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDT 250
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
+ +++ + G +++ M N V A+++ YS+ G +D A +F++
Sbjct: 251 HLLTALVTMYAGAGCMDMAMEFFRKMSVR----NLFVSTAMVSGYSKAGRLDDARVIFDQ 306
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
+ +D+ + ++I+ A EA+ +F EM GI+P VT + V++AC + G +D
Sbjct: 307 TEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKA 366
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
+ T G+E + ++++ ++ G + A D M + + S+++A
Sbjct: 367 -KWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMP-TRNVVSWSSMINAFA 424
Query: 297 IHGK----LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+HG+ L L Q+ + ++ + T+V + + SG +E +I A M +
Sbjct: 425 MHGEASDSLSLFAQMKQENVE---PNEVTFVGVLYGCSHSGLVEEGKKIFASMTD 476
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 134/288 (46%), Gaps = 10/288 (3%)
Query: 69 AFEVFSRVK-VKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACS 127
A +FS + + +++ + +++ L R+GE + ++ ++ R + ++ +L A S
Sbjct: 66 ALNLFSSISPLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVS 125
Query: 128 QLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNS 187
++ AL G +H + K + V L++MY+ CG I+ A VF+EM +RDV T+N+
Sbjct: 126 KVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNT 185
Query: 188 LIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDY 247
+I G EA ++F EM + + P ++ +++AC G + I+ + +
Sbjct: 186 MIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIEN- 244
Query: 248 GIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQI 307
+ +V + + G + A +F M + +S + G + G
Sbjct: 245 DVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVR------NLFVSTAMVSGYSKAGRLD 298
Query: 308 AKRLL--DCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
R++ D + + +AYA S +EA+++ +M +G++ +
Sbjct: 299 DARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPD 346
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/466 (42%), Positives = 295/466 (63%), Gaps = 1/466 (0%)
Query: 24 LVELYGKCGEF-KDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTV 82
++ Y + GE K+A++LF +M + +I+ Y G +E+A + F + K+ V
Sbjct: 32 IITAYVQSGECDKEAIELFCKMISASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLV 91
Query: 83 CWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM 142
+ A++DG +N + A LF E+ + + T +LS + +GA+ G IH +
Sbjct: 92 SYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRL 151
Query: 143 GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAV 202
K N + ALI+MYSRCG+I+ A QVF EM++R+V ++ S+I G A HG + A+
Sbjct: 152 LKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRAL 211
Query: 203 EMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDL 262
EMF +M+ G +P ++T+V VL+ACSH G++ G + F SM +++GI P++EHY C+VDL
Sbjct: 212 EMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDL 271
Query: 263 LSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTY 322
L R G EA +FI +M + D ++ +LL AC++HG +LG A+ +L+ D Y
Sbjct: 272 LGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAY 331
Query: 323 VLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIY 382
+LLSN +AS+G+WK+ V+IR MKE + KE GCS IEV N +H F +G+ HPQ QIY
Sbjct: 332 ILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIY 391
Query: 383 KKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVV 442
+++ +L +K GY P T+ VLHDIE+ +KE L HSE++A+ +GLIST IR+
Sbjct: 392 QELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIF 451
Query: 443 KNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
KNLRVC DCH+ IK I+ T R+I+VRD NRFHH +NG CSC DYW
Sbjct: 452 KNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 497
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 34/200 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G +IHG++LK G +SN+ L+ +Y +CG + A Q+F+EM + N V++ T MI +
Sbjct: 143 KGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRN-VISWTSMITGF 201
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+HG RAL++F +M +PNE+T V
Sbjct: 202 AKHGFA-------------------------------TRALEMFHKMLETGTKPNEITYV 230
Query: 121 CVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
VLSACS +G + G + +S +H I ++++ R G + +A++ M
Sbjct: 231 AVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPL 290
Query: 179 ERDVTTYNSLIAGLAMHGRS 198
D + +L+ +HG +
Sbjct: 291 MADALVWRTLLGACRVHGNT 310
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 133/290 (45%), Gaps = 43/290 (14%)
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMAR-ALDLFREMQRDNVRPNEVTIVCV 122
G V+++ +VF ++ + + WTA+I V++GE + A++LF +M +V
Sbjct: 9 GSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISASV---------- 58
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
+ VG +LI+MY+R G ++ A + F+ + E+++
Sbjct: 59 ----------------------------NCVGNSLISMYARSGRMEDARKAFDILFEKNL 90
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
+YN+++ G A + +S EA +F E+ + GI + TF +L+ + G + G +I
Sbjct: 91 VSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGR 150
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
+ + G + ++ + SR G E A+ M+ + I S+++ HG
Sbjct: 151 LLKG-GYKSNQCICNALISMYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKHGFAT 208
Query: 303 LGEQIAKRLLDCRS-ADSGTYVLLSNAYASSGKWKEAVQ-IRAKMKEAGV 350
++ ++L+ + + TYV + +A + G E + + KE G+
Sbjct: 209 RALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGI 258
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/559 (38%), Positives = 315/559 (56%), Gaps = 72/559 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKD------------------------- 36
G IH +K GL S KL++LY + G KD
Sbjct: 266 GVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYEL 325
Query: 37 ------AMQLFDEM------PEC---------------------------------NDVV 51
A+ LF EM P+C D+
Sbjct: 326 NEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDIT 385
Query: 52 ASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN 111
++ Y + GLV++A VF+ + KD + W +I G +NG + A++++ M+ +
Sbjct: 386 IGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEG 445
Query: 112 --VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDK 169
+ N+ T V VL ACSQ GAL G +H + K+ + L+ VG +L +MY +CG +D
Sbjct: 446 GEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDD 505
Query: 170 ALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH 229
AL +F ++ + +N+LIA HG +AV +F+EM+++G++P +TFV +L+ACSH
Sbjct: 506 ALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSH 565
Query: 230 GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLG 289
GLVD G F+ M DYGI P ++HYGC+VDL R G+ E A +FI +M + PD + G
Sbjct: 566 SGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWG 625
Query: 290 SLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
+LLSAC++HG + LG+ ++ L + G +VLLSN YAS+GKW+ +IR+ G
Sbjct: 626 ALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKG 685
Query: 350 VQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIE 409
++K PG SS+EV+N++ F G+ HP E++Y+++ L + +K+ GY P VL D+E
Sbjct: 686 LRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALHEKLKMVGYVPDHRFVLQDVE 745
Query: 410 DWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVR 469
D EKE L HSERLA+ + LI+T TTIR+ KNLRVC DCHS+ K I+ IT+R+IIVR
Sbjct: 746 DDEKEHILMSHSERLAMAFALITTPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVR 805
Query: 470 DRNRFHHFENGTCSCGDYW 488
D NRFHHF+NG CSCGDYW
Sbjct: 806 DSNRFHHFKNGVCSCGDYW 824
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 149/309 (48%), Gaps = 16/309 (5%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV + +I+ Y +G V NA +F + +D W AMI G ++G AL L
Sbjct: 184 DVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTL----- 238
Query: 109 RDNVRP-NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
D +R + VT+V +LSAC++ G G IHSY KH ++ V LI++Y+ G +
Sbjct: 239 SDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSL 298
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+VF+ M RD+ ++NS+I ++ + + A+ +F+EM I+P +T + + +
Sbjct: 299 KDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASIL 358
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPD 284
S G + + R I +V + +++G + A ++++ N D
Sbjct: 359 SQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPN----KD 414
Query: 285 HIMLGSLLSACKIHGKLQLGEQIAKRLLDCR---SADSGTYVLLSNAYASSGKWKEAVQI 341
I +++S +G ++ + + SA+ GT+V + A + +G ++ +++
Sbjct: 415 VISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKL 474
Query: 342 RAKMKEAGV 350
++ + G+
Sbjct: 475 HGRLLKNGL 483
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 38/200 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G ++HG++LK GL + L ++YGKCG DA+ LF ++P N V +T +I C+
Sbjct: 470 QGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNT-LIACH 528
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG +GE +A+ LF+EM + V+P+ +T V
Sbjct: 529 GFHG-----------------------------HGE--KAVMLFKEMLDEGVKPDHITFV 557
Query: 121 CVLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+LSACS G ++ G W M L H G ++++Y R G ++ AL + M
Sbjct: 558 TLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHY--GCMVDLYGRAGQLEIALNFIKSM 615
Query: 178 K-ERDVTTYNSLIAGLAMHG 196
+ D + + +L++ +HG
Sbjct: 616 PLQPDASIWGALLSACRVHG 635
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 130/293 (44%), Gaps = 25/293 (8%)
Query: 27 LYGKCGEFKDAMQLFDEMPECN---DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
L+ C + A L + N +V S ++N Y G V A F + +D
Sbjct: 60 LFRYCTNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYA 119
Query: 84 WTAMIDGLVRNG---EMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHS 140
W MI G R G E+ R LF M ++P+ T VL AC + G IH
Sbjct: 120 WNLMISGYGRAGYSSEVIRCFSLF--MLSSGLQPDYRTFPSVLKACRNVTD---GNKIHC 174
Query: 141 YMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIE 200
K + V +LI++Y R G + A +F+EM RD+ ++N++I+G G + E
Sbjct: 175 LALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKE 234
Query: 201 AVEMFREMINQGIRPT-KVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI 259
A+ + + G+R VT V +L+AC+ G + G I S + +G+E ++ +
Sbjct: 235 ALTL-----SDGLRAMDSVTVVSLLSACTEAGDFNRGVTI-HSYSIKHGLESELFVSNKL 288
Query: 260 VDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
+DL + G ++ M + D I S++ A +L EQ + +L
Sbjct: 289 IDLYAEFGSLKDCQKVFDRMYVR-DLISWNSIIKA------YELNEQPLRAIL 334
>gi|222640201|gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
Length = 983
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/465 (42%), Positives = 294/465 (63%), Gaps = 3/465 (0%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELY-GKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
+H +KLGL L+ ++ G G DA+ L D +I Y
Sbjct: 232 VHAHAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASV-DASTFNTLITAYARA 290
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
G V +A +F + ++ V W+AM++G V+ G+ AL LF MQ D VRP++ +V VL
Sbjct: 291 GRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVL 350
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
+AC+QLG LE G+W+H Y+ + I + +G AL++MY++CG++ A++VF+ MKE++V
Sbjct: 351 AACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVL 410
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
+ ++I GLAMHGR EA+E+F +M G++P + F+G L AC+H GLVD G E+F SM
Sbjct: 411 AWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSM 470
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQL 303
R YGI+P+IEHYGC+VDLL+R G EA + + M + PD ++ G+L++ C+ H ++L
Sbjct: 471 VRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVEL 530
Query: 304 GEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNN 363
E + K ++ SG YVLL N YA+SG+ A +IR M+E GV K PGCS++E+
Sbjct: 531 AEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEIKG 590
Query: 364 EIHEFILGDIRHPQREQIYKKMQELKQIVKL-EGYSPSTEVVLHDIEDWEKEWALAIHSE 422
IH+FI+GD+ HP E+I K E+ ++L EGY P + VL DIE+ EKE AL+ HSE
Sbjct: 591 VIHQFIVGDLSHPFIEEILSKWDEIDSRIRLEEGYVPDKKEVLLDIEEEEKENALSRHSE 650
Query: 423 RLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
++AI + LI+T IR+VKNLRVC+DCH + KLI+ + ++
Sbjct: 651 KMAIAFALINTSDDMPIRIVKNLRVCHDCHHVTKLISKVFDLTVV 695
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 39/207 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ +HG + +R LV++Y KCGE + AM++F M E N V+A T MI
Sbjct: 361 QGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKN-VLAWTTMIKGL 419
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG R E AL+LF +M+R V+P+++ +
Sbjct: 420 AMHG----------------------------RGSE---ALELFSQMERLGVKPDDIAFI 448
Query: 121 CVLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
L AC+ G ++ GR + M + + + H G ++++ +R G +++A ++ E+M
Sbjct: 449 GALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHY--GCMVDLLARNGLLNEAREMVEKM 506
Query: 178 KER-DVTTYNSLIAGLAMHGRSIEAVE 203
+ D + +L+AG H +++E E
Sbjct: 507 PMKPDALIWGALMAGCRFH-KNVELAE 532
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/441 (44%), Positives = 298/441 (67%), Gaps = 17/441 (3%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+++ + ++N Y + G +++A +F +V +DT AL+LF M
Sbjct: 151 SEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT-----------------EALNLFHRM 193
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
Q ++ + V +V L AC+ LG L+ G+WIH+Y+ KH I+++ I+G LI+MY++CGD+
Sbjct: 194 QTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDL 253
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
++A++VF +M+E+ V+ + ++I+G A+HGR EA+E F +M G+ P ++TF G+L AC
Sbjct: 254 EEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTAC 313
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SH GLV +F+SM R +G +P IEHYGC+VDLL R G +EA + I NM + P+ +
Sbjct: 314 SHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAI 373
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
G+LL+AC IHG L+LG+QI K L+ G Y+ L++ +A++G+W +A ++R +MKE
Sbjct: 374 WGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKE 433
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
GV K PGCS I VN HEF+ GD HPQ ++I ++++ + ++ EGY P +L D
Sbjct: 434 QGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLD 493
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
+ED EKE A+ HSE+LA+ +GLISTKP TIR+VKNLRVC DCH++IKLI+ + R+I+
Sbjct: 494 LEDKEKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREIL 553
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
+RDR RFH F++G C+CGDYW
Sbjct: 554 MRDRTRFHLFKDGNCTCGDYW 574
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 135/303 (44%), Gaps = 55/303 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
E R+IHGQ+LK GL + DE+P AS ++ C
Sbjct: 33 ELRQIHGQMLKTGL-------------------------ILDEIP------ASKLLAFCA 61
Query: 61 VEH-GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
+ G + A VF R+ +T W MI G + E AL L+ M +V N T
Sbjct: 62 SPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTF 121
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+L ACS + ALE + IH+++ K +L+N+YS+ GDI A +F+++ +
Sbjct: 122 PFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQ 181
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
RD EA+ +F M GI+ V V L AC+ G++D G I
Sbjct: 182 RDT-----------------EALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWI 224
Query: 240 FQSMTR-DYGIEPQIEHYGCI-VDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
+ + + I+P + GC+ +D+ ++ G EEA + M+ + +++S I
Sbjct: 225 HAYIKKHEIEIDPIL---GCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWT-AMISGYAI 280
Query: 298 HGK 300
HG+
Sbjct: 281 HGR 283
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 107/252 (42%), Gaps = 58/252 (23%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPE-------------- 46
E ++IH ++K+G S T L+ +Y K G+ K A LFD++ +
Sbjct: 136 ETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTEALNLFHRMQT 195
Query: 47 ----------------CNDV----------------------VASTVMINCYVEHGLVEN 68
C D+ + V+I+ Y + G +E
Sbjct: 196 AGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEE 255
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A EVF +++ K WTAMI G +G AL+ F +MQ V PN++T +L+ACS
Sbjct: 256 AIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSH 315
Query: 129 LGALELGRWIHSYMGK---HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER-DVTT 184
G + + + M + + + H G ++++ R G + +A ++ E M + +
Sbjct: 316 AGLVHEAKLLFESMERIHGFKPSIEHY--GCMVDLLGRAGLLKEAEELIENMPVKPNAAI 373
Query: 185 YNSLIAGLAMHG 196
+ +L+ +HG
Sbjct: 374 WGALLNACHIHG 385
>gi|115475551|ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa Japonica Group]
Length = 951
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/465 (42%), Positives = 294/465 (63%), Gaps = 3/465 (0%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELY-GKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
+H +KLGL L+ ++ G G DA+ L D +I Y
Sbjct: 232 VHAHAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASV-DASTFNTLITAYARA 290
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
G V +A +F + ++ V W+AM++G V+ G+ AL LF MQ D VRP++ +V VL
Sbjct: 291 GRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVL 350
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
+AC+QLG LE G+W+H Y+ + I + +G AL++MY++CG++ A++VF+ MKE++V
Sbjct: 351 AACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVL 410
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
+ ++I GLAMHGR EA+E+F +M G++P + F+G L AC+H GLVD G E+F SM
Sbjct: 411 AWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSM 470
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQL 303
R YGI+P+IEHYGC+VDLL+R G EA + + M + PD ++ G+L++ C+ H ++L
Sbjct: 471 VRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVEL 530
Query: 304 GEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNN 363
E + K ++ SG YVLL N YA+SG+ A +IR M+E GV K PGCS++E+
Sbjct: 531 AEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEIKG 590
Query: 364 EIHEFILGDIRHPQREQIYKKMQELKQIVKL-EGYSPSTEVVLHDIEDWEKEWALAIHSE 422
IH+FI+GD+ HP E+I K E+ ++L EGY P + VL DIE+ EKE AL+ HSE
Sbjct: 591 VIHQFIVGDLSHPFIEEILSKWDEIDSRIRLEEGYVPDKKEVLLDIEEEEKENALSRHSE 650
Query: 423 RLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
++AI + LI+T IR+VKNLRVC+DCH + KLI+ + ++
Sbjct: 651 KMAIAFALINTSDDMPIRIVKNLRVCHDCHHVTKLISKVFDLTVV 695
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 39/207 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ +HG + +R LV++Y KCGE + AM++F M E N V+A T MI
Sbjct: 361 QGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKN-VLAWTTMIKGL 419
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG R E AL+LF +M+R V+P+++ +
Sbjct: 420 AMHG----------------------------RGSE---ALELFSQMERLGVKPDDIAFI 448
Query: 121 CVLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
L AC+ G ++ GR + M + + + H G ++++ +R G +++A ++ E+M
Sbjct: 449 GALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHY--GCMVDLLARNGLLNEAREMVEKM 506
Query: 178 KER-DVTTYNSLIAGLAMHGRSIEAVE 203
+ D + +L+AG H +++E E
Sbjct: 507 PMKPDALIWGALMAGCRFH-KNVELAE 532
>gi|357114903|ref|XP_003559233.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 611
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/433 (46%), Positives = 295/433 (68%), Gaps = 1/433 (0%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
M +C+ G + +A VF R+ + V W+AMI G VR G + A+ LFR MQ VRP+
Sbjct: 180 MYSCF-GAGFLGDARNVFERMPRESAVTWSAMIGGYVRAGLSSDAVVLFRGMQVSGVRPD 238
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
EVT++ VL+A + LGALEL RW+ ++ + I + + ALI+ ++CGD+D A+ VFE
Sbjct: 239 EVTVIGVLAAAADLGALELTRWVGRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFE 298
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
M+ER V ++ S+I LAM GR EAV +F EM G+ P V F+GVL ACSH G+VD
Sbjct: 299 GMEERTVVSWTSVIDALAMEGRGKEAVGVFEEMKAVGVLPDDVAFIGVLTACSHAGMVDE 358
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G F SM +YGIEP+IEHYGC+VD+ R G E+ +F+ M + P+ I+ +L++AC
Sbjct: 359 GRGYFDSMKTEYGIEPKIEHYGCMVDMFGRAGMVEQGLEFVRAMPMKPNPIIWRTLVAAC 418
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
+ HG+L+LGE I + LL+ A YV+LSN YA + +WKE +IR +M + G++K PG
Sbjct: 419 RAHGRLELGESITRNLLNEFPAHEANYVMLSNVYALTQRWKEKSEIRREMSKRGIKKVPG 478
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
CS +E++ E+HEFI GD HPQ ++IY+ ++E+ + ++ G+ +T VL D+++ +KE
Sbjct: 479 CSLVELDGEVHEFIAGDESHPQYKEIYRMVEEMSRELRRIGHIAATSEVLLDLDEEDKEG 538
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
AL HSE+LAI + L+ T P T +RVVKNLRVC+DCH+ IK I+ + R+I+VRDR+RFH
Sbjct: 539 ALQWHSEKLAIAFVLLRTPPGTQVRVVKNLRVCSDCHAAIKCISQVYNREIVVRDRSRFH 598
Query: 476 HFENGTCSCGDYW 488
F++G+CSC D+W
Sbjct: 599 RFKDGSCSCKDFW 611
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 103/247 (41%), Gaps = 46/247 (18%)
Query: 99 RALDLFREMQRDNVRPNEVTIVCVLSACSQL-GALELGRWIHSYMGKHRIDLNHIVGGAL 157
RA F M R V PN+ T +L +C+ L G+ ++G H+ K +H V L
Sbjct: 118 RAAAFFPLMLRAAVAPNKFTFPFLLKSCAALPGSPDVGLQAHAAALKFGFAADHYVSNTL 177
Query: 158 INMYS--RCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRP 215
I+MYS G + A VFE M T++++I G G S +AV +FR M G+RP
Sbjct: 178 IHMYSCFGAGFLGDARNVFERMPRESAVTWSAMIGGYVRAGLSSDAVVLFRGMQVSGVRP 237
Query: 216 TKVTFVGV-----------------------------------LNACSHGGLVDLGFEIF 240
+VT +GV ++ + G VD +F
Sbjct: 238 DEVTVIGVLAAAADLGALELTRWVGRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVF 297
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKI 297
+ M E + + ++D L+ GR +EA MK + PD + +L+AC
Sbjct: 298 EGME-----ERTVVSWTSVIDALAMEGRGKEAVGVFEEMKAVGVLPDDVAFIGVLTACSH 352
Query: 298 HGKLQLG 304
G + G
Sbjct: 353 AGMVDEG 359
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
V +I+ + G V+ A VF ++ + V WT++ID L G A+ +F EM
Sbjct: 272 KSVTLCNALIDTLAKCGDVDGAVAVFEGMEERTVVSWTSVIDALAMEGRGKEAVGVFEEM 331
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGR-WIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
+ V P++V + VL+ACS G ++ GR + S ++ I+ G +++M+ R G
Sbjct: 332 KAVGVLPDDVAFIGVLTACSHAGMVDEGRGYFDSMKTEYGIEPKIEHYGCMVDMFGRAGM 391
Query: 167 IDKALQVFEEMKER-DVTTYNSLIAGLAMHGRSIEAVEMFREMINQ 211
+++ L+ M + + + +L+A HGR + R ++N+
Sbjct: 392 VEQGLEFVRAMPMKPNPIIWRTLVAACRAHGRLELGESITRNLLNE 437
>gi|15232821|ref|NP_190337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206890|sp|Q9SN85.1|PP267_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g47530
gi|6522536|emb|CAB61979.1| putative protein [Arabidopsis thaliana]
gi|62320272|dbj|BAD94558.1| hypothetical protein [Arabidopsis thaliana]
gi|332644772|gb|AEE78293.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/492 (40%), Positives = 305/492 (61%), Gaps = 37/492 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +IHG++ G S+ L++LY C DA ++FDE+P+ D V+ V+ +CY
Sbjct: 132 GLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPK-RDTVSWNVLFSCY- 189
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD---NVRPNEVT 118
+RN L LF +M+ D V+P+ VT
Sbjct: 190 ------------------------------LRNKRTRDVLVLFDKMKNDVDGCVKPDGVT 219
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
+ L AC+ LGAL+ G+ +H ++ ++ + + L++MYSRCG +DKA QVF M+
Sbjct: 220 CLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMR 279
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
ER+V ++ +LI+GLAM+G EA+E F EM+ GI P + T G+L+ACSH GLV G
Sbjct: 280 ERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMM 339
Query: 239 IFQSM-TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F M + ++ I+P + HYGC+VDLL R ++AY I +M++ PD + +LL AC++
Sbjct: 340 FFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRV 399
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
HG ++LGE++ L++ ++ ++G YVLL N Y++ GKW++ ++R+ MKE + +PGCS
Sbjct: 400 HGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCS 459
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIE-DWEKEWA 416
+IE+ +HEFI+ D+ HP++E+IYK + E+ Q +K+ GY LH++E + EK +A
Sbjct: 460 AIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSELHNLESEEEKGYA 519
Query: 417 LAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHH 476
L HSE+LAI +G++ T P TTIRV KNLR C DCH+ K ++++ R +IVRDR+RFHH
Sbjct: 520 LRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHH 579
Query: 477 FENGTCSCGDYW 488
F+ G+CSC D+W
Sbjct: 580 FKGGSCSCNDFW 591
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 90/182 (49%), Gaps = 5/182 (2%)
Query: 103 LFREMQRDNVRP-NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMY 161
LFR ++R++ P N ++ L C + G L G IH + + ++ L+++Y
Sbjct: 99 LFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLY 158
Query: 162 SRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ---GIRPTKV 218
S C + A +VF+E+ +RD ++N L + + R+ + + +F +M N ++P V
Sbjct: 159 STCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGV 218
Query: 219 TFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITN 278
T + L AC++ G +D G ++ + G+ + +V + SR G ++AY
Sbjct: 219 TCLLALQACANLGALDFGKQV-HDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYG 277
Query: 279 MK 280
M+
Sbjct: 278 MR 279
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/436 (44%), Positives = 270/436 (61%)
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
ST + Y ++ A ++F K W AMI G ++G A+ LF+EM
Sbjct: 343 STALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEF 402
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
PN VTI +LSAC+QLGAL G+ +H + ++ N V ALI+MY++CG+I +A Q
Sbjct: 403 TPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQ 462
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
+F+ E++ T+N++I G +HG EA+++F EM++ G +P+ VTF+ VL ACSH GL
Sbjct: 463 LFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGL 522
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
V G EIF +M Y IEP EHY C+VD+L R G+ E+A +FI M + P + G+LL
Sbjct: 523 VREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLL 582
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
AC IH L ++RL + + G YVLLSN Y+ + +A +R +K+ + K
Sbjct: 583 GACMIHKDTNLARVASERLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSK 642
Query: 353 EPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE 412
PGC+ IEVN H F+ GD H Q IY K++EL ++ GY T LHD+E+ E
Sbjct: 643 TPGCTLIEVNGTPHVFVCGDRSHSQTTSIYAKLEELTGKMREMGYQSETVTALHDVEEEE 702
Query: 413 KEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRN 472
KE +HSE+LAI +GLI+T+P T IR++KNLRVC DCH+ K I+ IT+R I+VRD N
Sbjct: 703 KELMFNVHSEKLAIAFGLITTEPGTEIRIIKNLRVCLDCHAATKFISKITERVIVVRDAN 762
Query: 473 RFHHFENGTCSCGDYW 488
RFHHF++G CSCGDYW
Sbjct: 763 RFHHFKDGICSCGDYW 778
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 157/329 (47%), Gaps = 36/329 (10%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+++ ++ +++ Y + V A +VF ++ +DTV W MI GLVRN ++ +F++M
Sbjct: 136 SNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDM 195
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
VR + T+ VL A +++ +++G I K + V LI+++S+C D+
Sbjct: 196 VAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDV 255
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
D A +F +++ D+ +YN+LI+G + +G + AV+ FRE++ G R + T VG++
Sbjct: 256 DTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVS 315
Query: 228 SHGGLVDL-----GF----------EIFQSMTRDY---------------GIEPQIEHYG 257
S G + L GF + ++T Y E + +
Sbjct: 316 SPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWN 375
Query: 258 CIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC 314
++ ++ G E A M + P+ + + S+LSAC G L G+ + +L+
Sbjct: 376 AMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSV-HQLIKS 434
Query: 315 RSADSGTYV--LLSNAYASSGKWKEAVQI 341
++ + YV L + YA G EA Q+
Sbjct: 435 KNLEQNIYVSTALIDMYAKCGNISEASQL 463
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 137/315 (43%), Gaps = 12/315 (3%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D+ T + + G +A +F V D + +I G + + A ++ + +
Sbjct: 38 HDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFSFSPD-ASSISFYTHL 96
Query: 108 QRDN-VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
++ + P+ T +SA LG +H++ D N V AL+++Y +
Sbjct: 97 LKNTTLSPDNFTYAFAISASPDD---NLGMCLHAHAVVDGFDSNLFVASALVDLYCKFSR 153
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+ A +VF++M +RD +N++I GL + ++V++F++M+ QG+R T VL A
Sbjct: 154 VAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPA 213
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE--EAYDFITNMKIAPD 284
+ V +G I Q + G + Y + L+S + E + + M PD
Sbjct: 214 VAEMQEVKVGMGI-QCLALKLGF--HFDDY-VLTGLISVFSKCEDVDTARLLFGMIRKPD 269
Query: 285 HIMLGSLLSACKIHGKLQLGEQIAKRLL-DCRSADSGTYVLLSNAYASSGKWKEAVQIRA 343
+ +L+S +G+ + + + LL + S T V L + G A I+
Sbjct: 270 LVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQG 329
Query: 344 KMKEAGVQKEPGCSS 358
++G +P S+
Sbjct: 330 FCVKSGTILQPSVST 344
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 80/196 (40%), Gaps = 34/196 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H + L N L+++Y KCG +A QLFD E N V
Sbjct: 425 GKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVT---------- 474
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
W MI G +G AL LF EM +P+ VT +
Sbjct: 475 ----------------------WNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLS 512
Query: 122 VLSACSQLGALELGRWI-HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VL ACS G + G I H+ + K+RI+ ++++ R G ++KAL+ +M E
Sbjct: 513 VLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVE 572
Query: 180 RDVTTYNSLIAGLAMH 195
+ +L+ +H
Sbjct: 573 PGPAVWGTLLGACMIH 588
>gi|242090555|ref|XP_002441110.1| hypothetical protein SORBIDRAFT_09g020580 [Sorghum bicolor]
gi|241946395|gb|EES19540.1| hypothetical protein SORBIDRAFT_09g020580 [Sorghum bicolor]
Length = 516
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/488 (41%), Positives = 302/488 (61%), Gaps = 2/488 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H + ++ + L+++Y KCG +DA ++FD + N VV T +++ Y
Sbjct: 30 GRQLHAHFVASPYSADDVVKSSLIDMYCKCGVPEDARKVFDSIGVKNGVVW-TALVSGYA 88
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+G A ++F + + WTA+I G V+ G A+ LF EM+RD VR ++ ++
Sbjct: 89 SNGCTGEAIDLFRSMPERGLFAWTALISGFVKAGNNTGAVGLFVEMRRDGVRIDDAFVLA 148
Query: 122 -VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+ ++L AL LGR +H + + IVG AL++MYS+C DI A +VF + R
Sbjct: 149 TVVGGAAELAALVLGRQLHGFAITLGFLSSMIVGNALVDMYSKCSDIHSAREVFGGIIVR 208
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++ +++ G A HGR E + ++ M+ G++P +VTFVG++ ACSH GLV G ++F
Sbjct: 209 DVVSWTTILVGEAQHGRVEEVLALYDRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQLF 268
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM R+YGI+P ++HY C +DLLSR G EA + IT M PD G+LLSACK H
Sbjct: 269 DSMKREYGIKPGLQHYTCYLDLLSRSGYLSEAEELITTMPYEPDEASWGALLSACKKHND 328
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
Q+ ++A LL+ R D TY+LLSN YA + KW ++R M E ++KEPG S IE
Sbjct: 329 TQMCLRVADNLLELRPKDPSTYILLSNVYAVNCKWDSVAKVRKIMAEMEIRKEPGYSWIE 388
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
E F G++ E+I + ++EL ++ GY P T V+HD+E+ EKE L +H
Sbjct: 389 AGRESRMFHAGEVPLDIGEEITRFLEELVSEMRKRGYVPDTSSVMHDLEENEKEQHLFLH 448
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLA+ +G++ + P + IRVVKNLRVC DCH+++K I+ I +RKIIVRD +RFHHFE+G
Sbjct: 449 SERLAVAFGILKSPPGSVIRVVKNLRVCGDCHTVMKFISEIAQRKIIVRDASRFHHFEDG 508
Query: 481 TCSCGDYW 488
CSC ++W
Sbjct: 509 NCSCSEFW 516
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 76/140 (54%), Gaps = 4/140 (2%)
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
+ D +RP+ + + SA ++L +L LGR +H++ + +V +LI+MY +CG
Sbjct: 2 LSDDALRPDHFVLASLASAAARLRSLRLGRQLHAHFVASPYSADDVVKSSLIDMYCKCGV 61
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+ A +VF+ + ++ + +L++G A +G + EA+++FR M +G+ G + A
Sbjct: 62 PEDARKVFDSIGVKNGVVWTALVSGYASNGCTGEAIDLFRSMPERGLFAWTALISGFVKA 121
Query: 227 CSHGGLVDLGFEIFQSMTRD 246
++ G V L F M RD
Sbjct: 122 GNNTGAVGL----FVEMRRD 137
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/487 (40%), Positives = 300/487 (61%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR IH VLK GL + LV++Y KCG
Sbjct: 120 GRLIHSTVLKNGLHLDNFVCSTLVDMYAKCG----------------------------- 150
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+++NA ++F R+ KD V T MI G G+ + LF +M+RD P++V +V
Sbjct: 151 ---MIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVT 207
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+++AC++LGA+ R +H Y+ R L+ +G A+I+MY++CG ID + ++F+ M++++
Sbjct: 208 IVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKN 267
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +++++I HG+ EA+E+F M+N GI P ++TF+ +L ACSH GLVD G ++F
Sbjct: 268 VISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFS 327
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M+ YG+ P ++HY C+VDLL R GR ++A I NM++ D + + L AC+IH ++
Sbjct: 328 LMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGACRIHRQV 387
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
L E+ AK LL ++ + G Y+LLSN YA++G+WK+ +IR M + ++K PG + IEV
Sbjct: 388 DLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLKKIPGYTWIEV 447
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+N I+ F GD H + +IY+ ++ L Q ++ GY P T VLHD+++ K L HS
Sbjct: 448 DNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGYVPDTNSVLHDVDEEVKLGILHAHS 507
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GLI+T T IR+ KNLRVC DCHS KL++ IT+R IIVRD NRFHHF+ G
Sbjct: 508 EKLAIAFGLIATPDGTPIRITKNLRVCGDCHSFCKLVSAITQRDIIVRDANRFHHFKEGI 567
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 568 CSCGDYW 574
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 107/246 (43%), Gaps = 22/246 (8%)
Query: 138 IHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR 197
+H+ + I + IV L+ M ++ D+ A +F +M+ERD +++ +I G +G
Sbjct: 22 VHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKNGD 81
Query: 198 SIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYG 257
+ FRE+I G +P + V+ AC + +G I ++ ++ G+ ++++
Sbjct: 82 YERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKN-GL--HLDNFV 138
Query: 258 C--IVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
C +VD+ ++ G + A +D + + +M+ K + L +Q+ +
Sbjct: 139 CSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRR--- 195
Query: 313 DCRSADSGTYVLLSNAYASSGKWKEA-----------VQIRAKMKEAGVQKEPGCSSIEV 361
D D V + NA A G +A + ++ A + C SI+
Sbjct: 196 DGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDS 255
Query: 362 NNEIHE 367
+ EI +
Sbjct: 256 SREIFD 261
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/485 (41%), Positives = 295/485 (60%), Gaps = 33/485 (6%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
+HG V+K G + L++ Y KCG+ + ++FD M E
Sbjct: 2146 VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEE------------------ 2187
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTIVCVL 123
KD + W +MI ++G AL++F M R VR N VT+ VL
Sbjct: 2188 --------------KDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVL 2233
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
AC+ GAL G+ IH + K ++ N VG ++I+MY +CG ++ A + F+ MKE++V
Sbjct: 2234 LACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVK 2293
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
++ +++AG MHGR+ EA+++F +M+ G++P +TFV VL ACSH GLV+ G+ F +M
Sbjct: 2294 SWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAM 2353
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQL 303
Y IEP IEHYGC+VDL R G EAY+ I MK+ PD ++ GSLL AC+IH + L
Sbjct: 2354 KHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDL 2413
Query: 304 GEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNN 363
GE A++L + + G YVLLSN YA +G+W + ++R MK + K PG S +E+
Sbjct: 2414 GEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKG 2473
Query: 364 EIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSER 423
+H F++GD HP E IYK +++L ++ GY P+ VLHD+++ EKE L +HSE+
Sbjct: 2474 RVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEK 2533
Query: 424 LAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCS 483
LA+ +G++++ P TTI ++KNLRVC DCH++IKLI+ + R +VRD RFHHF++G CS
Sbjct: 2534 LAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCS 2593
Query: 484 CGDYW 488
CGDYW
Sbjct: 2594 CGDYW 2598
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 169/272 (62%), Gaps = 1/272 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +HG ++K G + + L++ Y KCG + A+++F++M +VV+ T +I+ +
Sbjct: 144 GKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKM-RVRNVVSWTTVISGLI 202
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G ++ A +F + K+ V WTAMI+G +RN + AL+LF+ MQ +N+ PNE T+V
Sbjct: 203 SCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVS 262
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
++ AC+++G L LGR IH Y K+ I++ +G ALI+MYS+CG I A++VFE M +
Sbjct: 263 LIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKS 322
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ T+NS+I L +HG EA+ +F EM ++P +TF+GVL AC H V G F
Sbjct: 323 LPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFT 382
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAY 273
MT+ YGI P EHY C+ +L +R +EA+
Sbjct: 383 RMTQHYGIAPIPEHYECMTELYARSNNLDEAF 414
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 170/381 (44%), Gaps = 60/381 (15%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR H Q G ++ L+++Y KCG+ KDA LFDE+P +VV+ T MI YV
Sbjct: 2034 GRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIP-LRNVVSWTSMITGYV 2092
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ +NA +F ++ T + DG +NV + V +V
Sbjct: 2093 QNEQADNALLLFKDFLEEE----TEVEDG-------------------NNVPLDSVVMVS 2129
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLSACS++ + +H ++ K D + VG L++ Y++CG + +VF+ M+E+D
Sbjct: 2130 VLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKD 2189
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQ-GIRPTKVTFVGVLNACSHGGLV------- 233
++NS+IA A G S EA+E+F M+ G+R VT VL AC+H G +
Sbjct: 2190 DISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIH 2249
Query: 234 ------DLGFEI-----------------FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
DL + + T D E ++ + +V GR +
Sbjct: 2250 DQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAK 2309
Query: 271 EAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT--YVLL 325
EA D M + P++I S+L+AC G ++ G + + G Y +
Sbjct: 2310 EALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCM 2369
Query: 326 SNAYASSGKWKEAVQIRAKMK 346
+ + +G EA + +MK
Sbjct: 2370 VDLFGRAGCLNEAYNLIKRMK 2390
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 147/317 (46%), Gaps = 48/317 (15%)
Query: 23 KLVELYGKCGEFKDAMQLFDEMPEC---NDVVASTVMINCYVEHGLVENAFEVFSRVKVK 79
K + L C FK Q+ ++ ND + + +I+ Y HG + A +F +++
Sbjct: 29 KALFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNP 88
Query: 80 DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIH 139
T W +I NG +AL L++ M + ++ T V+ AC+ +++LG+ +H
Sbjct: 89 CTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVH 148
Query: 140 SYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHG--- 196
+ K+ + V LI+ Y +CG AL+VFE+M+ R+V ++ ++I+GL G
Sbjct: 149 GSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQ 208
Query: 197 --RSI--------------------------EAVEMFREMINQGIRPTKVTFVGVLNACS 228
R I EA+E+F+ M + I P + T V ++ AC+
Sbjct: 209 EARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACT 268
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIE---HYG-CIVDLLSRVGRPEEAYDFITNM--KIA 282
G++ LG I DY I+ IE + G ++D+ S+ G ++A + M K
Sbjct: 269 EMGILTLGRGI-----HDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSL 323
Query: 283 PDHIMLGSLLSACKIHG 299
P S++++ +HG
Sbjct: 324 P---TWNSMITSLGVHG 337
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 137/342 (40%), Gaps = 74/342 (21%)
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W ++I L R G+ AL F +++ + P + C + +CS L L GR H
Sbjct: 1983 WNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAF 2042
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
+ + V ALI+MYS+CG + A +F+E+ R+V ++ S+I G + ++ A+
Sbjct: 2043 VFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALL 2102
Query: 204 MFREMINQ--------GIRPTKVTFVGVLNACS-----------HGGLVDLGFE------ 238
+F++ + + + V V VL+ACS HG +V GF+
Sbjct: 2103 LFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVG 2162
Query: 239 -------------IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM----KI 281
+ D+ E + ++ + ++ G EA + M +
Sbjct: 2163 NTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGV 2222
Query: 282 APDHIMLGSLLSACKIHGKLQLGE-------------------------------QIAKR 310
+ + L ++L AC G L+ G+ ++AK+
Sbjct: 2223 RYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKK 2282
Query: 311 LLD-CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
D + + ++ + Y G+ KEA+ I KM AGV+
Sbjct: 2283 TFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVK 2324
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 170 ALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH 229
A ++ + + +V ++NS+IA LA G S+EA+ F + G+ PT+ +F + +CS
Sbjct: 1968 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCS- 2026
Query: 230 GGLVDL-GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
L DL + +G E + ++D+ S+ G+ ++A
Sbjct: 2027 -ALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDA 2069
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/488 (43%), Positives = 294/488 (60%), Gaps = 34/488 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
REIH QV++ G ++ LV +Y KCG KDA Q+FD M DVV+ + MI YV
Sbjct: 383 AREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSR-RDVVSWSAMIGAYV 441
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
E+G E AFE F M+R+NV P+ VT +
Sbjct: 442 ENGCGEEAFET-------------------------------FHLMKRNNVEPDVVTYIN 470
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHI-VGGALINMYSRCGDIDKALQVFEEMKER 180
+L+AC LGAL+LG I++ K + ++HI VG ALINM + G I++A +FE M +R
Sbjct: 471 LLNACGHLGALDLGMEIYTQAIKADL-VSHIPVGNALINMNVKHGSIERARYIFENMVQR 529
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV T+N +I G ++HG + EA+++F M+ + RP VTFVGVL+ACS G V+ G F
Sbjct: 530 DVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFF 589
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ GI P +E YGC+VDLL R G +EA I M + P+ + +LL+AC+I+G
Sbjct: 590 SYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGN 649
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
L + E+ A+R L D YV LS+ YA++G W+ ++R M+ GV+KE GC+ IE
Sbjct: 650 LDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIE 709
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
V ++H F++ D HPQ +IY ++ L +K EGY P T+ VLH++ + EKE A++ H
Sbjct: 710 VEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKREGYIPVTQNVLHNVGEQEKEEAISYH 769
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI YG++S IR+ KNLRVC DCHS K I+ +T R+II RD +RFHHF+NG
Sbjct: 770 SEKLAIAYGVLSLPSGAPIRIFKNLRVCGDCHSASKFISKVTGREIIARDASRFHHFKNG 829
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 830 VCSCGDYW 837
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 174/416 (41%), Gaps = 102/416 (24%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELY-------------------------------GK 30
G+E H QV+K+G S+ LV +Y K
Sbjct: 181 GKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAK 240
Query: 31 CGEFKDAMQLFDEM---------------------PEC-----------------NDVVA 52
G+ + A QLF M PE +DV
Sbjct: 241 SGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRV 300
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
+T +I Y+ G +E A VF ++KV+D V WT MI G N + A LF MQ + +
Sbjct: 301 ATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGI 360
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
+P+ +T + +++AC+ L L R IHS + + + +V AL++MY++CG I A Q
Sbjct: 361 QPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQ 420
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
VF+ M RDV +++++I +G EA E F M + P VT++ +LNAC H G
Sbjct: 421 VFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGA 480
Query: 233 VDLGFEIF-QSMTRD-------------------------YGIEPQIEH----YGCIVDL 262
+DLG EI+ Q++ D Y E ++ + ++
Sbjct: 481 LDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGG 540
Query: 263 LSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR 315
S G EA D M + P+ + +LSAC G ++ G + LLD R
Sbjct: 541 YSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGR 596
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 174/380 (45%), Gaps = 48/380 (12%)
Query: 11 KLGLRSNRSTRLKLVELYGKCGEFKDA---MQLFDEMPECN---DVVASTVMINCYVEHG 64
+LG SN V+L+ +C +DA Q+ D + + ++ +I + G
Sbjct: 51 RLGEGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICG 110
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
+ A + F V+ K V W A+I G + G + A LFR+M + + P+ +T + VL
Sbjct: 111 NMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLD 170
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
ACS L+LG+ H+ + K + +G AL++MY + G +D A QVF+ + +RDV+T
Sbjct: 171 ACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVST 230
Query: 185 YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS---------------- 228
+N +I G A G +A ++F M +G +P +++F+ +L+ CS
Sbjct: 231 FNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCM 290
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL---------------SRVGRPEEAY 273
+ GLVD + ++ R Y IE + D + + E+A+
Sbjct: 291 NTGLVD-DVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAF 349
Query: 274 DFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNA-- 328
M+ I PD I +++AC L L +I +++ A GT +L+ A
Sbjct: 350 GLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVV---RAGFGTDLLVDTALV 406
Query: 329 --YASSGKWKEAVQIRAKMK 346
YA G K+A Q+ M
Sbjct: 407 HMYAKCGAIKDARQVFDAMS 426
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/487 (40%), Positives = 301/487 (61%), Gaps = 4/487 (0%)
Query: 5 IHGQVLKLGLRSNRSTR---LKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
++ ++L GLR + T LK GE + + + D+ +I+ Y
Sbjct: 135 LYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYA 194
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G V +A VF ++ V+D V W +M+ +NG ++ L REM + VRP E T+V
Sbjct: 195 KCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVT 254
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V+S+ + + L GR IH + +H N V ALI+MY++CG + AL +FE ++E+
Sbjct: 255 VISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKR 314
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++N++I G AMHG ++ A+++F +M + RP +TFVGVL ACS G L+D G ++
Sbjct: 315 VVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYN 373
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M RDYGI P ++HY C++DLL G+ +EAYD I NM + PD + G+LL++CKIHG +
Sbjct: 374 LMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNV 433
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+L E ++L++ DSG YV+L+N YA SGKW+ ++R M + ++K CS IEV
Sbjct: 434 ELAELALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIEV 493
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N+++ F+ GD+ H + IY +++ L+ ++ GY+P T V HD+E+ EK + HS
Sbjct: 494 KNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFHDVEEDEKTSMVCSHS 553
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ERLAI +GLIST P T + + KNLR+C DCH IK I+ I +R+I VRD NR+H F++G
Sbjct: 554 ERLAIAFGLISTSPGTRLLITKNLRICEDCHVAIKFISKIMEREITVRDVNRYHSFKHGM 613
Query: 482 CSCGDYW 488
CSCGD+W
Sbjct: 614 CSCGDHW 620
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 146/312 (46%), Gaps = 38/312 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H Q LG+ N+ KLV LY +A LFD
Sbjct: 66 GKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFD------------------- 106
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ ++ W +I G NG A+ L+ +M +RP+ T+
Sbjct: 107 -------------KIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPF 153
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL ACS L A+ GR IH Y+ K + + VG ALI+MY++CG + A +VF+++ RD
Sbjct: 154 VLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRD 213
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+NS++A A +G E++ + REM G+RPT+ T V V+++ + + G EI
Sbjct: 214 AVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHG 273
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK----IAPDHIMLGSLLSACKI 297
R +G + + ++D+ ++ G + A ++ ++ + I+ G + +
Sbjct: 274 FGWR-HGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAV 332
Query: 298 HGKLQLGEQIAK 309
G L L +++ K
Sbjct: 333 -GALDLFDKMRK 343
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 40/212 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GREIHG + G +SN + L+++Y KCG K A+ LF+ + E VV+ +I Y
Sbjct: 268 GREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLRE-KRVVSWNAIITGYA 326
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HGL A LDLF +M++++ RP+ +T V
Sbjct: 327 MHGLAVGA-------------------------------LDLFDKMRKED-RPDHITFVG 354
Query: 122 VLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
VL+ACS+ L+ GR +++ M + + H +I++ CG +D+A + M
Sbjct: 355 VLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYT--CMIDLLGHCGQLDEAYDLIRNMS 412
Query: 179 ER-DVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
+ D + +L+ +HG ++E E+ E +
Sbjct: 413 VKPDSGVWGALLNSCKIHG-NVELAELALEKL 443
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 117/273 (42%), Gaps = 17/273 (6%)
Query: 110 DNVRPNEVT---IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
D+ P T +L +C AL G+ +H+ I N + L+++Y+
Sbjct: 38 DSFPPQPTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNS 97
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+ A +F+++ ++++ +N LI G A +G A+ ++ +M++ G+RP T VL A
Sbjct: 98 LLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKA 157
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
CS + G I + + + G E + ++D+ ++ G +A + + D +
Sbjct: 158 CSALSAIGEGRSIHEYVIKS-GWERDLFVGAALIDMYAKCGCVMDAGRVFDKI-VVRDAV 215
Query: 287 MLGSLLSACKIHG----KLQLGEQIAKR--------LLDCRSADSGTYVLLSNAYASSGK 334
+ S+L+A +G + L ++A L+ S+ + L
Sbjct: 216 LWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFG 275
Query: 335 WKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHE 367
W+ Q K+K A + C S++V + E
Sbjct: 276 WRHGFQSNDKVKTALIDMYAKCGSVKVALALFE 308
>gi|317106614|dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas]
Length = 514
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/486 (43%), Positives = 304/486 (62%), Gaps = 4/486 (0%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVAS-TVMINCYVE 62
E H ++++ G +N S L+ Y C + A Q+ ++ +A ++I+ ++
Sbjct: 32 ETHTRIIRFGYGTNSSIAASLISTYVNCNQLNLAYQVIRQVFSWTVSLAGLNLVIDSFMR 91
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
G E A +VF ++ +D V W +MI G VRNG+ AL F+ M NV P++ T V
Sbjct: 92 IGEYEIAKKVFCKMPDRDVVTWNSMIGGYVRNGKFEEALRSFQAMLSSNVEPDKFTFASV 151
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
++AC++LGAL +W+H M + RI++N I+ ALI+MYS+CG I+ A +VFE ++ DV
Sbjct: 152 ITACARLGALNHAQWLHDLMVQKRIEVNFILSSALIDMYSKCGRIETAKEVFESVERNDV 211
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
+ +NSLI GLA+HG +++A+ +F +M + + P +TF+G+L ACSH GLV G + F
Sbjct: 212 SVWNSLINGLAVHGLALDAMMVFSKMEAENVLPDSLTFLGILKACSHCGLVKEGRKYFDL 271
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
M Y I+PQ+EHYG +VDLL R G +EAY IT M + PD I+ LLSAC+ H +
Sbjct: 272 MENYYSIKPQLEHYGAMVDLLGRAGLLDEAYAMITAMPMEPDVIVWRILLSACRTHRNTE 331
Query: 303 LGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVN 362
LGE + SG YVLLSN Y S +W A ++R MKE GV+K G S E
Sbjct: 332 LGEVAVANI---SGPKSGDYVLLSNIYCSQNRWDNAQEVREMMKEEGVRKRRGKSWFEWE 388
Query: 363 NEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSE 422
+ +H F GD HP+ E +YK ++ L Q KLEG+ PSTE+V+ D+ + EKE L HSE
Sbjct: 389 DVVHRFRAGDKSHPETEALYKILEGLIQRTKLEGFVPSTELVMMDVSEEEKEENLYHHSE 448
Query: 423 RLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTC 482
+LA+ YG++ T P T IR+ KNLR+C DCH+ IK+++ + R II+RDR RFH FE G+C
Sbjct: 449 KLALAYGILKTSPGTEIRIYKNLRICYDCHNWIKMVSGLLSRVIIIRDRIRFHRFEGGSC 508
Query: 483 SCGDYW 488
SCGDYW
Sbjct: 509 SCGDYW 514
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/520 (40%), Positives = 305/520 (58%), Gaps = 33/520 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G EIH GL S+ LV+ Y KCG +A +LF M DVVA MI
Sbjct: 127 DGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSH-RDVVAWNAMIAGC 185
Query: 61 VEHGLVENAFE--------------------------------VFSRVKVKDTVCWTAMI 88
+GL ++A + +F + V++ V W+AMI
Sbjct: 186 SLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMI 245
Query: 89 DGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRID 148
G V + M ALD+FR MQ + P+ T++ VL ACS L AL+ G H Y+
Sbjct: 246 GGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFA 305
Query: 149 LNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM 208
+ ++ ALI+MYS+CG I A +VF M D+ ++N++I G +HG +EA+ +F ++
Sbjct: 306 TDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDL 365
Query: 209 INQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGR 268
+ G++P +TF+ +L++CSH GLV G F +M+RD+ I P++EH C+VD+L R G
Sbjct: 366 LALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGL 425
Query: 269 PEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNA 328
+EA+ FI NM PD + +LLSAC+IH ++LGE+++K++ +G +VLLSN
Sbjct: 426 IDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNI 485
Query: 329 YASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQEL 388
Y+++G+W +A IR K+ G++K PGCS IE+N +H F+ GD H Q QI +K++EL
Sbjct: 486 YSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEEL 545
Query: 389 KQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVC 448
+K GY V D+E+ EKE L HSE+LAI +G+++ K I V KNLRVC
Sbjct: 546 LVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVC 605
Query: 449 NDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
DCH+ IK + ITKR+I VRD NRFHHF+NGTC+CGD+W
Sbjct: 606 GDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 645
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 137/307 (44%), Gaps = 43/307 (14%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
E ++IH LK ++ S KL LY C + A +LFDE+P
Sbjct: 26 EAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN-------------- 71
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ W +I NG A+DL+ M VRPN+ T
Sbjct: 72 ------------------PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYP 113
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL ACS L A+E G IHS+ ++ + V AL++ Y++CG + +A ++F M R
Sbjct: 114 FVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR 173
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV +N++IAG +++G +AV++ +M +GI P T VGVL C + +IF
Sbjct: 174 DVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQ---CLLYARKIF 230
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIA---PDHIMLGSLLSACKI 297
M G+ ++ + ++ +EA D M+++ PD + +L AC
Sbjct: 231 DVM----GVRNEVS-WSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSH 285
Query: 298 HGKLQLG 304
LQ G
Sbjct: 286 LAALQHG 292
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 121/275 (44%), Gaps = 39/275 (14%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L AC Q +L + IH + K+ + + V L +Y C + A ++F+E+
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +N +I A +G A++++ M++ G+RP K T+ VL ACS ++ G EI
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI-H 132
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG-- 299
S + +G+E + +VD ++ G EA ++M D + ++++ C ++G
Sbjct: 133 SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMS-HRDVVAWNAMIAGCSLYGLC 191
Query: 300 --KLQLGEQI------------------------AKRLLDCRSA-DSGTYVLLSNAYASS 332
+QL Q+ A+++ D + ++ + Y +S
Sbjct: 192 DDAVQLIMQMQEEGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVAS 251
Query: 333 GKWKEAVQIRAKMKEAGVQKE--------PGCSSI 359
KEA+ I M+ +G+ + P CS +
Sbjct: 252 DCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHL 286
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/519 (39%), Positives = 308/519 (59%), Gaps = 32/519 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPE--------------- 46
G ++H Q + G ++ L+ +Y +CG+ A ++FDEM E
Sbjct: 122 GIQLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFR 181
Query: 47 CNDVVASTVMINC---------------YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGL 91
C DV + + C Y + G + A VF + ++D V W+ MI G
Sbjct: 182 CGDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGF 241
Query: 92 VRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH 151
NG A FRE+ R+ +R NEV++ VLSAC+Q GA E G+ +H ++ K
Sbjct: 242 AHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVG 301
Query: 152 IVGGALINMYSRCGDIDKALQVFEEMK-ERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
V ALI+ YS+CG++ A VF+ M R + ++ S+IAGLAMHG EA+++F EM
Sbjct: 302 SVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEE 361
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
G+RP +TF+ +L ACSH GLV+ G +F M YGIEP IEHYGC+VDL R R +
Sbjct: 362 SGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAARLQ 421
Query: 271 EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYA 330
+AY+FI M ++P+ I+ +LL AC IHG +++ E + RL + +SG +VLLSN YA
Sbjct: 422 KAYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAELVKARLAEMDPDNSGDHVLLSNVYA 481
Query: 331 SSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQ 390
+GKWK+ IR M E ++K PG S IE++ I+ F+ G+ + E+ ++K++E+
Sbjct: 482 VAGKWKDVSSIRRTMTEHSMKKTPGWSMIEIDKVIYGFVAGEKPNEVTEEAHEKLREIML 541
Query: 391 IVKLE-GYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCN 449
++ E GY+P VLHDIE+ EKE +++ HSE+LA +G+ +R+VKNLRVC
Sbjct: 542 RLRTEAGYAPQLRSVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGRILRIVKNLRVCG 601
Query: 450 DCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
DCH+++KLI+ + + +IIVRDR+RFH F++G CSC DYW
Sbjct: 602 DCHTVMKLISKVYQVEIIVRDRSRFHSFKDGFCSCRDYW 640
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 149/391 (38%), Gaps = 70/391 (17%)
Query: 25 VELYGKCGEFKDAMQLFDEMPEC----NDVVASTVMINCYVE-HGLVENAFEVFSRVKVK 79
V L KC K Q+ ++ + + +V ++++C + + A +F
Sbjct: 6 VSLLSKCSSLKPTKQIHAQICKTGLHTDPLVFGKLLLHCAITISDALHYALRLFHHFPNP 65
Query: 80 DTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTIVCVLSACSQLGALELGRWI 138
DT +I L + +L F +++R + P+ T L A + L G +
Sbjct: 66 DTFMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHLRPGIQL 125
Query: 139 HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE------------------- 179
HS +H D + VG LI+MY+ CGD A +VF+EM E
Sbjct: 126 HSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRCGDV 185
Query: 180 ------------RDVTTYNSLIAGLAMHGRSIEAVEMFREM------------------- 208
R++T++N ++AG A G A +F EM
Sbjct: 186 EGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFAHNG 245
Query: 209 ------------INQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHY 256
+ + IR +V+ GVL+AC+ G + G +I G
Sbjct: 246 CFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFG-KILHGFVEKAGFLYVGSVN 304
Query: 257 GCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRS 316
++D S+ G A NM +A + S+++ +HG + Q+ + +
Sbjct: 305 NALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGV 364
Query: 317 ADSG-TYVLLSNAYASSGKWKEAVQIRAKMK 346
G T++ L A + SG +E + +KMK
Sbjct: 365 RPDGITFISLLYACSHSGLVEEGCGLFSKMK 395
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/490 (40%), Positives = 299/490 (61%), Gaps = 4/490 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDE--MPECNDVVASTVMINC 59
G+++H +L+ + L+ +Y K G ++A + + M + N V++ T ++
Sbjct: 314 GKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLN-VISFTALLEG 372
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
YV+ G +++A E+F + +D V WTAMI G +NG A++LFR M R PN T+
Sbjct: 373 YVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTV 432
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
VLS C+ L LE G+ IH + + + V +++ MY+R G + A +VF+ +
Sbjct: 433 AAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHW 492
Query: 180 R-DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
R + T+ S+I LA HG +AV +F EM+ G++P ++TFVGVL+AC+H G VD G
Sbjct: 493 RKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKR 552
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
FQ + +GI P++ HY C+VDLL+R G EA +FI M + PD I GSLLSAC++H
Sbjct: 553 YFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVH 612
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
L E A++LL +SG Y LSN Y++ G+W +A +I + K+ V+KE G S
Sbjct: 613 KNADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSW 672
Query: 359 IEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALA 418
+ N +H F D+ HPQR+ +Y+ ++ +K G+ P + VLHD++D KE L+
Sbjct: 673 THIGNRVHVFGADDVLHPQRDTVYRTAAKMWDDIKKAGFVPDLQSVLHDVDDELKEEMLS 732
Query: 419 IHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFE 478
HSE+LAI +GL+ST TT+R++KNLRVCNDCH+ IK I+ + R+II+RD RFHHF+
Sbjct: 733 RHSEKLAIAFGLVSTPEKTTLRIMKNLRVCNDCHTAIKFISKVADREIILRDATRFHHFK 792
Query: 479 NGTCSCGDYW 488
+G CSC DYW
Sbjct: 793 DGFCSCKDYW 802
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 156/338 (46%), Gaps = 39/338 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H V+KLGL S ++ +YGKCG+ + A +F+ MPE V + M++
Sbjct: 181 GRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVFERMPE-RSVSSWNAMVSLDA 239
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLF-REMQRDNVRPNEVTIV 120
G ++ A +F + + V W A+I G +NG A+AL F R + + P+E TI
Sbjct: 240 HLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTIT 299
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRI--------------------------------- 147
VLSAC+ LG + +G+ +H+Y+ + R+
Sbjct: 300 SVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMA 359
Query: 148 DLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
DLN I AL+ Y + GD+ A ++F+ M RDV + ++I G +G + EA+E+FR
Sbjct: 360 DLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRL 419
Query: 208 MINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
MI G P T VL+ C+ ++ G +I R E IV + +R G
Sbjct: 420 MIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQ-EQSSSVSNSIVTMYARSG 478
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGE 305
A + + + S++ A HG LGE
Sbjct: 479 SLPWARRVFDRVHWRKETVTWTSMIVALAQHG---LGE 513
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 181/385 (47%), Gaps = 52/385 (13%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGE-----FKDAMQLFDEMPECN-DVVASTV 55
GR IH + +K GL ++ L+ Y F++A +LFDE+P +V
Sbjct: 42 GRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFDEIPAAQRNVFTWNS 101
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+++ Y + G + +A VF+ + +D V WT M+ GL R G A+ +F +M D + P
Sbjct: 102 LLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLSPT 161
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
+ T+ VLS+C+ A +GR +HS++ K + V +++NMY +CGD + A VFE
Sbjct: 162 QFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVFE 221
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
M ER V+++N++++ A GR A+ +F M ++ I V++ V+ + GL
Sbjct: 222 RMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTI----VSWNAVIAGYNQNGLNAK 277
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
F M ++ +APD + S+LSAC
Sbjct: 278 ALWFFSRM--------------------------------LSYSTMAPDEFTITSVLSAC 305
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSG--TYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
G + +G+Q+ +L R G T L+S YA SG + A R M++A +
Sbjct: 306 ANLGMVSIGKQVHAYILRSRMPYIGQVTNALIS-MYAKSGSVENA---RGVMQQAVMAD- 360
Query: 354 PGCSSIEVNNEIHEFI-LGDIRHPQ 377
+ I + ++ LGD++H +
Sbjct: 361 --LNVISFTALLEGYVKLGDMKHAR 383
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/492 (40%), Positives = 301/492 (61%), Gaps = 5/492 (1%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
G+EIHG ++ G+ N LV LY KC ++A +FD MP DVV+ ++ Y
Sbjct: 283 SGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPH-RDVVSWNGVLTAY 341
Query: 61 VEHGLVENAFEVF---SRVKVK-DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
++ E F +F SR V+ D W A+I G + NG A+++FR+MQ+ +PNE
Sbjct: 342 FKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNE 401
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
+TI +L ACS L +G+ IH Y+ +H + AL+ MY++CGD++ + VF+
Sbjct: 402 ITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDM 461
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
M+ +DV +N++I AMHG EA+ +F +M+ ++P VTF GVL+ CSH LV+ G
Sbjct: 462 MRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEG 521
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
+IF SM RD+ +EP HY C+VD+ SR GR EAY FI M + P G+LL+AC+
Sbjct: 522 VQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACR 581
Query: 297 IHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGC 356
++ ++L + AK+L + + G YV L N ++ W EA Q+R MKE G+ K PGC
Sbjct: 582 VYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGC 641
Query: 357 SSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWA 416
S ++V N++H F++GD + + ++IY + EL + +K+ GY P T+ VL DI+ EK +
Sbjct: 642 SWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAES 701
Query: 417 LAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHH 476
L HSE+LA+ +G+++ +TIRV KNLR+C DCH+ IK ++ + I+VRD RFHH
Sbjct: 702 LCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHH 761
Query: 477 FENGTCSCGDYW 488
F+NG CSC D W
Sbjct: 762 FKNGNCSCKDLW 773
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/479 (24%), Positives = 216/479 (45%), Gaps = 63/479 (13%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPEC---NDVVASTVMI 57
E +I+ + + G++ + L + G+ ++ D+ C +DV +I
Sbjct: 147 EAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALI 206
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y + VE A VF + V+D V WT++ V+ G + +D+FREM V+PN +
Sbjct: 207 HAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPM 266
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T+ +L AC++L L+ G+ IH + +H + +N V AL+++Y++C + +A VF+ M
Sbjct: 267 TVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLM 326
Query: 178 KERDV-----------------------------------TTYNSLIAGLAMHGRSIEAV 202
RDV T+N++I G +GRS EAV
Sbjct: 327 PHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAV 386
Query: 203 EMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDL 262
EMFR+M G +P ++T +L ACS + +G EI + R + + + ++ +
Sbjct: 387 EMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVG-DLTSTTALLYM 445
Query: 263 LSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGT 321
++ G + + M+ D + +++ A +HG + + ++L R +S T
Sbjct: 446 YAKCGDLNLSRNVFDMMR-RKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVT 504
Query: 322 YVLLSNAYASSGKWKEAVQIRAKM-KEAGVQKEPGCSSIEVN--------NEIHEFILGD 372
+ + + + S +E VQI M ++ V+ + S V+ NE ++FI G
Sbjct: 505 FTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGM 564
Query: 373 IRHPQRE---------QIYKKMQ----ELKQIVKLEGYSPSTEVVLHDIEDWEKEWALA 418
P ++YK ++ K++ ++E +P V L +I K W+ A
Sbjct: 565 PMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEA 623
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 156/363 (42%), Gaps = 50/363 (13%)
Query: 22 LKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDT 81
L+L+ + G+F A QLFD +P+ + ST +I+ HGL A +++S
Sbjct: 102 LRLIRVALNVGDFNRARQLFDNIPQPDPTTCST-LISALTTHGLSNEAIKIYS------- 153
Query: 82 VCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSY 141
+Q ++P+ + AC+ G + +H
Sbjct: 154 ------------------------SLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDD 189
Query: 142 MGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEA 201
+ + + VG ALI+ Y +C ++ A +VF+++ RDV ++ SL + G +
Sbjct: 190 ATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKG 249
Query: 202 VEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVD 261
+++FREM G++P +T +L AC+ + G EI R +G+ + +V
Sbjct: 250 MDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVR-HGMVVNLFVCSALVS 308
Query: 262 LLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSAD 318
L ++ EA +D + + + + +L + + L ++++ D AD
Sbjct: 309 LYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSR---DGVRAD 365
Query: 319 SGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE--------PGCS---SIEVNNEIHE 367
T+ + +G+ +EAV++ KM++ G + P CS ++ + EIH
Sbjct: 366 EATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHC 425
Query: 368 FIL 370
++
Sbjct: 426 YVF 428
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 87/202 (43%), Gaps = 36/202 (17%)
Query: 153 VGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG 212
+G LI + GD ++A Q+F+ + + D TT ++LI+ L HG S EA++++ + +G
Sbjct: 100 LGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERG 159
Query: 213 IRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
I+P F+ AC+ G D L R +E
Sbjct: 160 IKPDMPVFLAAAKACAVSG-----------------------------DAL----RVKEV 186
Query: 273 YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASS 332
+D T + D + +L+ A +GK + E + D D ++ LS+ Y
Sbjct: 187 HDDATRCGVMSDVFVGNALIHA---YGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKC 243
Query: 333 GKWKEAVQIRAKMKEAGVQKEP 354
G ++ + + +M +GV+ P
Sbjct: 244 GFPRKGMDVFREMGWSGVKPNP 265
>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/489 (40%), Positives = 303/489 (61%), Gaps = 33/489 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG +IHG + K GL + + L+ +YGKCG+
Sbjct: 103 EGMQIHGYIFKRGLEGDLFVQNSLINMYGKCGK--------------------------- 135
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTI 119
+E + VF + +D W+A+I G + L +F EM R+ + RP E +
Sbjct: 136 -----IELSCSVFEHMDRRDVASWSAIIAAHASLGMWSECLSVFGEMSREGSCRPEESIL 190
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V VLSAC+ LGAL+LGR H + ++ ++N IV +LI+MY +CG I+K L +F+ M +
Sbjct: 191 VSVLSACTHLGALDLGRCTHVTLLRNIREMNVIVQTSLIDMYVKCGCIEKGLSLFQRMVK 250
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
++ +Y+ +I GLAMHGR +EA+++F +M+ +G++P V ++GVL+AC+H GLVD G +
Sbjct: 251 KNQLSYSVMITGLAMHGRGMEALQVFSDMLEEGLKPDDVVYLGVLSACNHAGLVDEGLQC 310
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F M ++GIEP I+HYGCIV L+ R G +A + I +M I P+ ++ LLSACK H
Sbjct: 311 FNRMKLEHGIEPTIQHYGCIVHLMGRAGMLNKALEHIRSMPIKPNEVVWRGLLSACKFHH 370
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
L++GE AK L + S++ G YV+LSN YA + +W++ +IR +M G + PG S +
Sbjct: 371 NLEIGEIAAKSLGELNSSNPGDYVVLSNMYARAKRWEDVAKIRTEMARKGFTQTPGFSLV 430
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
+V +I++F+ D+ HPQ + +Y+ + +++ +K EGYSP T VL D+++ EK L
Sbjct: 431 QVERKIYKFVSQDMSHPQCKGMYEMIHQMEWQLKFEGYSPDTSQVLFDVDEEEKRQRLKA 490
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HS++LA+ + LI T IR+ +NLR+CNDCH+ KLI+ I +R+I VRDRNRFHHF++
Sbjct: 491 HSQKLAMAFALIHTSQGAPIRIARNLRMCNDCHTYTKLISVIYQREITVRDRNRFHHFKD 550
Query: 480 GTCSCGDYW 488
GTCSC DYW
Sbjct: 551 GTCSCRDYW 559
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 150/308 (48%), Gaps = 6/308 (1%)
Query: 48 NDVVASTVMINCYV-EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
N AS ++ C + + G ++ A +F ++ T + MI G V M AL L+ E
Sbjct: 16 NSFCASNLVATCALSDWGSMDYACSIFRQIDQPGTFEFNTMIRGYVNVMNMENALFLYYE 75
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M V + T + AC+ L ++E G IH Y+ K ++ + V +LINMY +CG
Sbjct: 76 MLERGVESDNFTYPALFKACASLRSIEEGMQIHGYIFKRGLEGDLFVQNSLINMYGKCGK 135
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLN 225
I+ + VFE M RDV +++++IA A G E + +F EM +G RP + V VL+
Sbjct: 136 IELSCSVFEHMDRRDVASWSAIIAAHASLGMWSECLSVFGEMSREGSCRPEESILVSVLS 195
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDH 285
AC+H G +DLG ++ R+ E + ++D+ + G E+ M + +
Sbjct: 196 ACTHLGALDLGRCTHVTLLRNIR-EMNVIVQTSLIDMYVKCGCIEKGLSLFQRM-VKKNQ 253
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRLL-DCRSADSGTYVLLSNAYASSGKWKEAVQIRAK 344
+ +++ +HG+ Q+ +L + D Y+ + +A +G E +Q +
Sbjct: 254 LSYSVMITGLAMHGRGMEALQVFSDMLEEGLKPDDVVYLGVLSACNHAGLVDEGLQCFNR 313
Query: 345 MK-EAGVQ 351
MK E G++
Sbjct: 314 MKLEHGIE 321
>gi|15242278|ref|NP_197038.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180838|sp|Q9LXE8.1|PP386_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g15340, mitochondrial; Flags: Precursor
gi|7671503|emb|CAB89344.1| putative protein [Arabidopsis thaliana]
gi|332004768|gb|AED92151.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/493 (40%), Positives = 316/493 (64%), Gaps = 13/493 (2%)
Query: 6 HGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGL 65
HG +K+G+ ++ L+++YGKCG + ++F+E+ E VV+ TV+++ V+
Sbjct: 134 HGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEE-KSVVSWTVVLDTVVKWEG 192
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ-RDNVRPNEVTIVCVLS 124
+E EVF + ++ V WT M+ G + G L+L EM R N VT+ +LS
Sbjct: 193 LERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLS 252
Query: 125 ACSQLGALELGRWIHSY-------MGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
AC+Q G L +GRW+H Y MG+ + +VG AL++MY++CG+ID ++ VF M
Sbjct: 253 ACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLM 312
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
++R+V T+N+L +GLAMHG+ ++MF +MI + ++P +TF VL+ACSH G+VD G+
Sbjct: 313 RKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGW 371
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F S+ R YG+EP+++HY C+VDLL R G EEA + M + P+ ++LGSLL +C +
Sbjct: 372 RCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSV 430
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
HGK+++ E+I + L+ ++ +L+SN Y + G+ A +R +++ G++K PG S
Sbjct: 431 HGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLS 490
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTE-VVLHDIEDW-EKEW 415
SI VN+ +H F GD HP+ ++IY K+ E+ + ++ GY P +V H D EKE
Sbjct: 491 SIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQ 550
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
AL HSE+LA+C+GL+ TKP T + V KNLR+C DCHS +K+++ + R+II+RDRNRFH
Sbjct: 551 ALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFH 610
Query: 476 HFENGTCSCGDYW 488
F+ G+CSC DYW
Sbjct: 611 QFKGGSCSCSDYW 623
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 152/372 (40%), Gaps = 71/372 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLK--LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINC 59
G+E+H + GL+ + L L + Y GE A +LFDE+P
Sbjct: 25 GKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIP-------------- 70
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
+ KD V WT ++ R G + ++ LF EM+R V ++V++
Sbjct: 71 ----------------LSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSV 114
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG-------------- 165
VC+ C++L L + H K + + V AL++MY +CG
Sbjct: 115 VCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEE 174
Query: 166 -----------------DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM 208
+++ +VF EM ER+ + ++AG G + E +E+ EM
Sbjct: 175 KSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEM 234
Query: 209 INQ-GIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYG------CIVD 261
+ + G VT +L+AC+ G + +G + + + + Y +VD
Sbjct: 235 VFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVD 294
Query: 262 LLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT 321
+ ++ G + + + M+ + + +L S +HGK ++ + +++ D T
Sbjct: 295 MYAKCGNIDSSMNVFRLMR-KRNVVTWNALFSGLAMHGKGRMVIDMFPQMIREVKPDDLT 353
Query: 322 YVLLSNAYASSG 333
+ + +A + SG
Sbjct: 354 FTAVLSACSHSG 365
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/492 (40%), Positives = 310/492 (63%), Gaps = 7/492 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+IHG V+K GL ++ ++++YGK G ++LFDE E + I
Sbjct: 271 GRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEF-EMMETGVCNAYITGLS 329
Query: 62 EHGLVENAFEVFSRVKVK----DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+GLV+ A E+F K + + V WT++I G +NG+ AL+LFREMQ V+PN V
Sbjct: 330 RNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRV 389
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGK-HRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
TI +L AC + AL GR H + + H +D H VG ALI+MY++CG I + VF
Sbjct: 390 TIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVH-VGSALIDMYAKCGRIKMSQIVFNM 448
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
M +++ +NSL+ G +MHG++ E + +F ++ ++P ++F +L+AC GL D G
Sbjct: 449 MPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
++ F M+ +YGI+P++EHY C+V+LL R G+ +EAYD I + PD + G+LL++C+
Sbjct: 509 WKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCR 568
Query: 297 IHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGC 356
+ + L E A++L + GTYVL+SN YA+ G W E IR KM+ G++K PGC
Sbjct: 569 LQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGC 628
Query: 357 SSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWA 416
S I+V N+++ + D HPQ +QI +KM E+ + ++ G+ P+ + L D+E+ E+E
Sbjct: 629 SWIQVKNKVYTLLACDKSHPQIDQITEKMDEISEEMRKSGHRPNLDFALQDVEEQEQEQM 688
Query: 417 LAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHH 476
L HSE+LA+ +GL++T T ++V+KNLR+C DCH++IK I++ R+I +RD NRFHH
Sbjct: 689 LWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHH 748
Query: 477 FENGTCSCGDYW 488
F++G CSCGD+W
Sbjct: 749 FKDGICSCGDFW 760
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 131/527 (24%), Positives = 226/527 (42%), Gaps = 76/527 (14%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G++IH GL + + L +Y +CG DA ++FD M E DVV + ++ Y
Sbjct: 135 GKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSE-KDVVTCSALLCGYA 193
Query: 62 EHGLVENAFEVFSRVKVK----DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
G +E + S ++ + V W ++ G R+G A+ +F++M P++V
Sbjct: 194 RKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQV 253
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMY---------------- 161
T+ VL + L +GR IH Y+ K + + V A+++MY
Sbjct: 254 TVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEF 313
Query: 162 ---------------SRCGDIDKALQVF----EEMKERDVTTYNSLIAGLAMHGRSIEAV 202
SR G +DKAL++F E+ E +V ++ S+IAG A +G+ IEA+
Sbjct: 314 EMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEAL 373
Query: 203 EMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQI---EHYG-C 258
E+FREM G++P +VT +L AC G + LG T + + + H G
Sbjct: 374 ELFREMQVAGVKPNRVTIPSMLPAC--GNIAALG---HGRSTHGFAVRVHLLDDVHVGSA 428
Query: 259 IVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SA 317
++D+ ++ GR + + + NM + + SL++ +HGK + I + L+ R
Sbjct: 429 LIDMYAKCGRIKMS-QIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKP 487
Query: 318 DSGTYVLLSNAYASSG----KWK------EAVQIRAKMKE----------AGVQKEPGCS 357
D ++ L +A G WK E I+ +++ AG +E
Sbjct: 488 DFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDL 547
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQEL--KQIVKLEGYSPSTEVVLHDIEDWEKEW 415
E+ E + G + + R Q + E+ +++ LE +P T V++ +I + W
Sbjct: 548 IKEIPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMW 607
Query: 416 ALAIHSERLAICYGLISTKPYTTIRV---VKNLRVCNDCHSMIKLIA 459
GL + I+V V L C+ H I I
Sbjct: 608 TEVDSIRNKMESLGLKKNPGCSWIQVKNKVYTLLACDKSHPQIDQIT 654
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 94/196 (47%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
ND S +I Y + +A + + ++++I L + ++++ +F M
Sbjct: 48 NDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLFSQSIGVFSRM 107
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ P+ + + C++L A + G+ IH +D++ V G+L +MY RCG +
Sbjct: 108 FSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRM 167
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A +VF+ M E+DV T ++L+ G A G E V + EM GI P V++ G+L+
Sbjct: 168 GDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGF 227
Query: 228 SHGGLVDLGFEIFQSM 243
+ G +FQ M
Sbjct: 228 NRSGYHKEAVIMFQKM 243
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/525 (39%), Positives = 296/525 (56%), Gaps = 39/525 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +IH V KL L N + +Y +CG +DA ++FD MP DVV+ MI +
Sbjct: 142 GLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPH-RDVVSWNAMIAGFA 200
Query: 62 EHGLVENAFEVFSR--------------------------------------VKVKDTVC 83
GL + A EVF + ++ K+ +
Sbjct: 201 RVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGNAKPDDIRFVRRVFDNMQFKELIS 260
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W AM+ N +A++LF M++D V P+ +T+ VL C +L A +G+ IH +
Sbjct: 261 WNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIK 320
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
+ + N ++ AL++MY+ CG + A ++F+ M RDV ++ S+I+ HG EAV+
Sbjct: 321 RKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVD 380
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
+F +M+ QG+ P + FV VL ACSH GL+ G F SMT Y I P+ EHY C+VDLL
Sbjct: 381 LFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLL 440
Query: 264 SRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV 323
R G EAYDFIT M I P+ + G+LL AC+IH + +G A L +G YV
Sbjct: 441 GRAGCINEAYDFITTMLIEPNERVWGALLQACRIHSNMDIGLVAADNLFSLVPEQTGYYV 500
Query: 324 LLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYK 383
LLSN YA +G+W + +R+ M G++K PG S +E+ +++H F +GD HPQ E IY
Sbjct: 501 LLSNMYARAGRWADVTSVRSVMVNKGIKKFPGTSIVELGDQVHTFHIGDRCHPQSEMIYH 560
Query: 384 KMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVK 443
K+ EL ++ GY+P E LHD+E+ +KE L++HSE+LAI + L++T P T IRV
Sbjct: 561 KLDELLGKIRGMGYNPEVEATLHDVEEEDKEDHLSVHSEKLAIAFLLLNTSPGTIIRVTM 620
Query: 444 NLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
NLR C+DCH KLI+ IT R+I+++D NR HH G CSCGDYW
Sbjct: 621 NLRTCSDCHLAAKLISIITCREIVLKDTNRIHHIVQGVCSCGDYW 665
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 151/364 (41%), Gaps = 56/364 (15%)
Query: 81 TVCWTAMIDGLVRNGEMARALDLFREMQRDNVR--PNEVTIVCVLSACSQLGALELGRWI 138
TVC+ +I L + AL LF M+ P+ T L +CS L LG I
Sbjct: 86 TVCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSCSASKDLLLGLQI 145
Query: 139 HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRS 198
HS + K R+D N V + I+MYSRCG + A +VF+ M RDV ++N++IAG A G
Sbjct: 146 HSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAGFARVGLF 205
Query: 199 IEAVEMFREMIN-QGIRPTKVTFVGVLNACSHGGLVDLGF--EIFQSMTRDYGIEPQIEH 255
A+E+F++ + QG P T G+L A + D+ F +F +M Q +
Sbjct: 206 DRAIEVFKQFVVLQGSMPDAGTMAGILPAMGNAKPDDIRFVRRVFDNM--------QFKE 257
Query: 256 YGCIVDLLSRVGRPE------EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQI-- 307
+L+ E E + + ++ PD I L ++L C +G++I
Sbjct: 258 LISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHE 317
Query: 308 -----------------------------AKRLLDCRSA-DSGTYVLLSNAYASSGKWKE 337
A+ + D SA D ++ + +AY G +E
Sbjct: 318 IIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGRE 377
Query: 338 AVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRH-----PQREQIYKKMQELKQIV 392
AV + KM G++ + + H +L D +H R I K + +V
Sbjct: 378 AVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMV 437
Query: 393 KLEG 396
L G
Sbjct: 438 DLLG 441
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/492 (40%), Positives = 301/492 (61%), Gaps = 5/492 (1%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
G+EIHG ++ G+ N LV LY KC ++A +FD MP DVV+ ++ Y
Sbjct: 197 SGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPH-RDVVSWNGVLTAY 255
Query: 61 VEHGLVENAFEVF---SRVKVK-DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
++ E F +F SR V+ D W A+I G + NG A+++FR+MQ+ +PNE
Sbjct: 256 FKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNE 315
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
+TI +L ACS L +G+ IH Y+ +H + AL+ MY++CGD++ + VF+
Sbjct: 316 ITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDM 375
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
M+ +DV +N++I AMHG EA+ +F +M+ ++P VTF GVL+ CSH LV+ G
Sbjct: 376 MRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEG 435
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
+IF SM RD+ +EP HY C+VD+ SR GR EAY FI M + P G+LL+AC+
Sbjct: 436 VQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACR 495
Query: 297 IHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGC 356
++ ++L + AK+L + + G YV L N ++ W EA Q+R MKE G+ K PGC
Sbjct: 496 VYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGC 555
Query: 357 SSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWA 416
S ++V N++H F++GD + + ++IY + EL + +K+ GY P T+ VL DI+ EK +
Sbjct: 556 SWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAES 615
Query: 417 LAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHH 476
L HSE+LA+ +G+++ +TIRV KNLR+C DCH+ IK ++ + I+VRD RFHH
Sbjct: 616 LCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHH 675
Query: 477 FENGTCSCGDYW 488
F+NG CSC D W
Sbjct: 676 FKNGNCSCKDLW 687
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/479 (24%), Positives = 216/479 (45%), Gaps = 63/479 (13%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPEC---NDVVASTVMI 57
E +I+ + + G++ + L + G+ ++ D+ C +DV +I
Sbjct: 61 EAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALI 120
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y + VE A VF + V+D V WT++ V+ G + +D+FREM V+PN +
Sbjct: 121 HAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPM 180
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T+ +L AC++L L+ G+ IH + +H + +N V AL+++Y++C + +A VF+ M
Sbjct: 181 TVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLM 240
Query: 178 KERDV-----------------------------------TTYNSLIAGLAMHGRSIEAV 202
RDV T+N++I G +GRS EAV
Sbjct: 241 PHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAV 300
Query: 203 EMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDL 262
EMFR+M G +P ++T +L ACS + +G EI + R + + + ++ +
Sbjct: 301 EMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVG-DLTSTTALLYM 359
Query: 263 LSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGT 321
++ G + + M+ D + +++ A +HG + + ++L R +S T
Sbjct: 360 YAKCGDLNLSRNVFDMMR-RKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVT 418
Query: 322 YVLLSNAYASSGKWKEAVQIRAKM-KEAGVQKEPGCSSIEVN--------NEIHEFILGD 372
+ + + + S +E VQI M ++ V+ + S V+ NE ++FI G
Sbjct: 419 FTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGM 478
Query: 373 IRHPQRE---------QIYKKMQ----ELKQIVKLEGYSPSTEVVLHDIEDWEKEWALA 418
P ++YK ++ K++ ++E +P V L +I K W+ A
Sbjct: 479 PMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEA 537
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 156/363 (42%), Gaps = 50/363 (13%)
Query: 22 LKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDT 81
L+L+ + G+F A QLFD +P+ + ST +I+ HGL A +++S
Sbjct: 16 LRLIRVALNVGDFNRARQLFDNIPQPDPTTCST-LISALTTHGLSNEAIKIYS------- 67
Query: 82 VCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSY 141
+Q ++P+ + AC+ G + +H
Sbjct: 68 ------------------------SLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDD 103
Query: 142 MGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEA 201
+ + + VG ALI+ Y +C ++ A +VF+++ RDV ++ SL + G +
Sbjct: 104 ATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKG 163
Query: 202 VEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVD 261
+++FREM G++P +T +L AC+ + G EI R +G+ + +V
Sbjct: 164 MDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVR-HGMVVNLFVCSALVS 222
Query: 262 LLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSAD 318
L ++ EA +D + + + + +L + + L ++++ D AD
Sbjct: 223 LYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSR---DGVRAD 279
Query: 319 SGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE--------PGCS---SIEVNNEIHE 367
T+ + +G+ +EAV++ KM++ G + P CS ++ + EIH
Sbjct: 280 EATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHC 339
Query: 368 FIL 370
++
Sbjct: 340 YVF 342
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 87/202 (43%), Gaps = 36/202 (17%)
Query: 153 VGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG 212
+G LI + GD ++A Q+F+ + + D TT ++LI+ L HG S EA++++ + +G
Sbjct: 14 LGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERG 73
Query: 213 IRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
I+P F+ AC+ G D L R +E
Sbjct: 74 IKPDMPVFLAAAKACAVSG-----------------------------DAL----RVKEV 100
Query: 273 YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASS 332
+D T + D + +L+ A +GK + E + D D ++ LS+ Y
Sbjct: 101 HDDATRCGVMSDVFVGNALIHA---YGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKC 157
Query: 333 GKWKEAVQIRAKMKEAGVQKEP 354
G ++ + + +M +GV+ P
Sbjct: 158 GFPRKGMDVFREMGWSGVKPNP 179
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/462 (42%), Positives = 288/462 (62%), Gaps = 2/462 (0%)
Query: 28 YGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAM 87
Y + G +DA +LF+ MPE + V A M+ + + G+V+ A VF +++ +D W+AM
Sbjct: 246 YIQAGHVEDAAELFNAMPE-HPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAM 304
Query: 88 IDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRI 147
I +N + AL FREM VRPN +++ +L+ C+ L L+ GR +H+ M +
Sbjct: 305 IKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSF 364
Query: 148 DLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
D++ ALI MY +CG++DKA +VF + +D+ +NS+I G A HG +A+ +F +
Sbjct: 365 DMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHD 424
Query: 208 MINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
M G+ P +T++G L ACS+ G V G EIF SMT + I P EHY C+VDLL R G
Sbjct: 425 MRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSG 484
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSN 327
EEA+D I NM + PD ++ G+L+ AC++H ++ E AK+LL+ ++G YVLLS+
Sbjct: 485 LVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEVAAKKLLELEPGNAGPYVLLSH 544
Query: 328 AYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDI-RHPQREQIYKKMQ 386
Y S G+W++A ++R + + K PGCS IE + +H F GD+ HP+ I + ++
Sbjct: 545 IYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILE 604
Query: 387 ELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLR 446
+L ++ GYS VLHDI++ +K +L HSER A+ YGL+ IRV+KNLR
Sbjct: 605 KLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLR 664
Query: 447 VCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
VC DCHS IKLIA IT R+I++RD NRFHHF++G CSC DYW
Sbjct: 665 VCGDCHSAIKLIAKITSREIVLRDANRFHHFKDGFCSCRDYW 706
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 156/319 (48%), Gaps = 18/319 (5%)
Query: 31 CGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDG 90
G +A +LFDEMP+ DVVA T M++ Y + G + A +F + ++ V WTAMI G
Sbjct: 156 AGRVNEARRLFDEMPD-RDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISG 214
Query: 91 LVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLN 150
+NGE+ A LF M NEV+ +L Q G +E + + M +H +
Sbjct: 215 YAQNGEVNLARKLFEVMPER----NEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPV--- 267
Query: 151 HIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
A++ + + G +D A VFE+M+ERD T++++I + +EA+ FREM+
Sbjct: 268 -AACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLW 326
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
+G+RP + + +L C+ ++D G E+ +M R + + ++ + + G +
Sbjct: 327 RGVRPNYPSVISILTVCAALAVLDYGREVHAAMLR-CSFDMDVFAVSALITMYIKCGNLD 385
Query: 271 EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR----SADSGTYVLLS 326
+A + D +M S+++ HG LGEQ D R S D TY+
Sbjct: 386 KAKRVFHTFE-PKDIVMWNSMITGYAQHG---LGEQALGIFHDMRLAGMSPDGITYIGAL 441
Query: 327 NAYASSGKWKEAVQIRAKM 345
A + +GK KE +I M
Sbjct: 442 TACSYTGKVKEGREIFNSM 460
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 43/209 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GRE+H +L+ + L+ +Y KCG A ++F E D+V MI Y
Sbjct: 352 GREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTF-EPKDIVMWNSMITGYA 410
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+HGL E +AL +F +M+ + P+ +T +
Sbjct: 411 QHGLGE-------------------------------QALGIFHDMRLAGMSPDGITYIG 439
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGA-----LINMYSRCGDIDKALQVFEE 176
L+ACS G ++ GR I + M + + I GA ++++ R G +++A + +
Sbjct: 440 ALTACSYTGKVKEGREIFNSMTVN----SSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKN 495
Query: 177 MK-ERDVTTYNSLIAGLAMHGRSIEAVEM 204
M E D + +L+ MH R+ E E+
Sbjct: 496 MPVEPDAVIWGALMGACRMH-RNAEIAEV 523
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 21/197 (10%)
Query: 156 ALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRP 215
AL+ Y R D AL +F M RD+ +YN+LI+GL++ +++ + + + P
Sbjct: 53 ALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTLP--DAAAALASIPFPP 110
Query: 216 TKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEH--YGCIVDLLSRVGRPEEA- 272
+ V+F +L GL+ +FQ M P+ H Y ++ L GR EA
Sbjct: 111 SVVSFTSLLRGYVRHGLLADAIRLFQQM-------PERNHVSYTVLLGGLLDAGRVNEAR 163
Query: 273 --YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYA 330
+D + + + ML A +I L +++ KR + ++ + + YA
Sbjct: 164 RLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKR-------NVVSWTAMISGYA 216
Query: 331 SSGKWKEAVQIRAKMKE 347
+G+ A ++ M E
Sbjct: 217 QNGEVNLARKLFEVMPE 233
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/466 (44%), Positives = 296/466 (63%), Gaps = 2/466 (0%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKV-KDTV 82
++ Y +CG+ + A F P VVA T MI Y++ VE A +F + V K+ V
Sbjct: 192 MISGYIECGDLEKASHFFKVAP-VRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLV 250
Query: 83 CWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM 142
W AMI G V N L LFR M + +RPN + L CS+L AL+LGR IH +
Sbjct: 251 TWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIV 310
Query: 143 GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAV 202
K + + +LI+MY +CG++ A ++FE MK++DV +N++I+G A HG + +A+
Sbjct: 311 SKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKAL 370
Query: 203 EMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDL 262
+FREMI+ IRP +TFV VL AC+H GLV++G F+SM RDY +EPQ +HY C+VDL
Sbjct: 371 CLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDL 430
Query: 263 LSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTY 322
L R G+ EEA I +M P + G+LL AC++H ++L E A++LL S ++ Y
Sbjct: 431 LGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGY 490
Query: 323 VLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIY 382
V L+N YAS +W++ ++R +MKE+ V K PG S IE+ N++H F D HP+ + I+
Sbjct: 491 VQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIH 550
Query: 383 KKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVV 442
KK++EL++ +KL GY P E LH++E+ +KE L HSE+LA+ +G I + I+V
Sbjct: 551 KKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVF 610
Query: 443 KNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
KNLR+C DCH IK I+ I KR+IIVRD RFHHF++G+CSCGDYW
Sbjct: 611 KNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 111/246 (45%), Gaps = 48/246 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+IH V K L ++ + L+ +Y KCGE DA +LF+ M + DVVA MI+ Y
Sbjct: 303 GRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKK-KDVVAWNAMISGYA 361
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+HG + +AL LFREM + +RP+ +T V
Sbjct: 362 QHGNAD-------------------------------KALCLFREMIDNKIRPDWITFVA 390
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL AC+ G + +G + S + ++++ ++++ R G +++AL++ M R
Sbjct: 391 VLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFR 450
Query: 181 D-VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+ +L+ +H +++E E E + Q LN+ + G V L I
Sbjct: 451 PHAAVFGTLLGACRVH-KNVELAEFAAEKLLQ------------LNSQNAAGYVQLA-NI 496
Query: 240 FQSMTR 245
+ S R
Sbjct: 497 YASKNR 502
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 163 RCGDIDKALQVFEEMKERDVTTYNSLIAGLAMH-GRSIEAVEMFREM 208
R GDID AL+VF M+ ++ T+NSL+ G++ R +EA ++F E+
Sbjct: 73 RSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEI 119
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/491 (40%), Positives = 299/491 (60%), Gaps = 5/491 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLK----LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMI 57
G+++H +LK L N S L L+ LY K + +A ++F MP +++ ++
Sbjct: 308 GKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMP-VRNIITWNAIL 366
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ YV G +E A F + VK+ + T MI GL +NG L LF++M+ D P +
Sbjct: 367 SGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDF 426
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
L+ACS LGALE GR +H+ + + + VG A+I+MY++CG ++ A VF M
Sbjct: 427 AFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTM 486
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
D+ ++NS+IA L HG ++A+E+F +M+ +G+ P ++TF+ VL ACSH GLV+ G
Sbjct: 487 PSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGR 546
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F SM YGI P +HY +VDL R G A I +M P + +LL+ C+I
Sbjct: 547 HYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRI 606
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
HG + LG + A++L + GTYVLLSN YA G+W E ++R M++ V+KEP CS
Sbjct: 607 HGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACS 666
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IEV N++H F++ D HP+ +Y+ +++L +K GY P T+ VLHD+E +KE AL
Sbjct: 667 WIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHAL 726
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
+ HSE+LA+ +G++ P T+RV KN+R+C DCH+ K ++ + +R+IIVRDR RFHHF
Sbjct: 727 STHSEKLAVGFGIMKLPPGATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHF 786
Query: 478 ENGTCSCGDYW 488
+NG CSC DYW
Sbjct: 787 KNGDCSCRDYW 797
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 166/354 (46%), Gaps = 51/354 (14%)
Query: 4 EIHGQVLKLGLRSNRSTRLK-LVELYGK--------CGEFKDAMQLFDEMPECNDVVAST 54
++H V+K G+ S+ L L+ +Y K C A +LFDEMP+ D + T
Sbjct: 169 QMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEMPK-RDELTWT 227
Query: 55 VMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP 114
MI YV + + A EVF + W AMI G V G AL L R+M+ ++
Sbjct: 228 TMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQF 287
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH----IVGGALINMYSRCGDIDKA 170
+++T ++SAC+ +G+ ++G+ +H+Y+ K+ ++ NH V ALI +Y + +D+A
Sbjct: 288 DDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEA 347
Query: 171 LQVFEEMKERDVTTYNS-------------------------------LIAGLAMHGRSI 199
++F M R++ T+N+ +I+GLA +G
Sbjct: 348 RKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGD 407
Query: 200 EAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI 259
E +++F++M G P F G L ACS G ++ G ++ + G E + +
Sbjct: 408 EGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVH-LGYESSLSVGNAM 466
Query: 260 VDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG----KLQLGEQIAK 309
+ + ++ G E A M + D + S+++A HG ++L +Q+ K
Sbjct: 467 ISMYAKCGVVEAAESVFVTMP-SVDLVSWNSMIAALGQHGHGVKAIELFDQMLK 519
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 176/404 (43%), Gaps = 67/404 (16%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
R +H ++ G + +L+E+Y K A QLF+E+P D +A T +I Y
Sbjct: 32 ARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPN-PDAIARTTLITAYC 90
Query: 62 EHGLVENAFEVF--SRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
G +E E+F + + ++D+V + AMI G NG+ AL+LFR M+RD+ RP++ T
Sbjct: 91 ALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTF 150
Query: 120 VCVLSA----------CSQLG--------------------------ALELGRWIHSYMG 143
VLSA C Q+ A ELG + +
Sbjct: 151 TSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVS 210
Query: 144 KHRI-----DLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRS 198
++ + + +I Y R D++ A +VFE M E +N++I+G G
Sbjct: 211 ARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCF 270
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGC 258
EA+ + R+M GI+ +T+ +++AC++ G +G ++ + ++ E H C
Sbjct: 271 QEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKN---ELNPNHSFC 327
Query: 259 ------IVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ-----LGEQI 307
++ L + + +EA M + + I ++LS G+++ E
Sbjct: 328 LSVSNALITLYCKNNKVDEARKIFYAMPVR-NIITWNAILSGYVNAGRMEEAKSFFEEMP 386
Query: 308 AKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
K LL T ++ + A +G E +++ +M+ G +
Sbjct: 387 VKNLL--------TLTVMISGLAQNGFGDEGLKLFKQMRLDGFE 422
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/487 (40%), Positives = 297/487 (60%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR IH V K GL + LV++YGKC E +DA LFD+MPE
Sbjct: 251 GRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPE--------------- 295
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+D V WT MI G G +L LF +M+ + V P++V +V
Sbjct: 296 -----------------RDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVT 338
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V+ AC++LGA+ R I Y+ + + L+ I+G A+I+M+++CG ++ A ++F+ M+E++
Sbjct: 339 VVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKN 398
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +++++IA HG+ +A+++F M+ GI P K+T V +L ACSH GLV+ G F
Sbjct: 399 VISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFS 458
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M DY + ++HY C+VDLL R GR +EA I +M + D + G+ L AC+ H +
Sbjct: 459 LMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDV 518
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
L E+ A LL+ + + G Y+LLSN YA++G+W++ + R M + ++K PG + IEV
Sbjct: 519 VLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEV 578
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+N+ H+F +GD HP+ ++IY+ ++ L ++L GY P T VLHD+++ K L HS
Sbjct: 579 DNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHS 638
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GLI+T +T IR++KNLRVC DCH+ KL++ IT R IIVRD NRFHHF+ G
Sbjct: 639 EKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGA 698
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 699 CSCGDYW 705
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 171/347 (49%), Gaps = 48/347 (13%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV+ T MI+ Y + G VE+A E+F R++ K+ + W+AMI +G+ +ALDLFR M
Sbjct: 165 DVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMML 224
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ P+++T+ +L ACS L L++GR IH + K +DL+H V AL++MY +C +I+
Sbjct: 225 SSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIE 284
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +F++M ERD+ T+ +I G A G + E++ +F +M +G+ P KV V V+ AC+
Sbjct: 285 DARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACA 344
Query: 229 ---------------------------------HG--GLVDLGFEIFQSMTRDYGIEPQI 253
H G V+ EIF M E +
Sbjct: 345 KLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRME-----EKNV 399
Query: 254 EHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKR 310
+ ++ G+ +A D M I P+ I L SLL AC G ++ G +
Sbjct: 400 ISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSL 459
Query: 311 LLDCRS--ADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
+ + S AD Y + + +G+ EA+++ M V+K+ G
Sbjct: 460 MWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMT---VEKDEG 503
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 168/351 (47%), Gaps = 72/351 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR IH V K GL + LV++Y KC E +DA L
Sbjct: 49 GRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFL--------------------- 87
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
F +++ +D V WT MI G G+ +L LF +M+ + V P++V +V
Sbjct: 88 -----------FDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVT 136
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V+ AC++LGA+ R I Y+ + + L+ I+G A+I+MY++CG ++ A ++F+ M+E++
Sbjct: 137 VVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKN 196
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +++++IA HG+ +A+++FR M++ G+ P K+T +L ACS + +G +
Sbjct: 197 VISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMG-RLIH 255
Query: 242 SMTRDYGIEPQIEHYGC--IVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+ +G++ ++H+ C +VD+ + E+A M P+
Sbjct: 256 HIVYKFGLD--LDHFVCAALVDMYGKCREIEDARFLFDKM---PER-------------- 296
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
D T+ ++ YA G E++ + KM+E GV
Sbjct: 297 ------------------DLVTWTVMIGGYAECGNANESLVLFDKMREEGV 329
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/489 (42%), Positives = 306/489 (62%), Gaps = 2/489 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN-DVVASTVMINCY 60
G++IH +++ + + L+ +Y K G + A ++ ++ N DV+A T +++ Y
Sbjct: 297 GKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGY 356
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V+ G + A +F ++V+D V WTAMI G V+NG A++LFR M ++ +PN T+
Sbjct: 357 VKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLA 416
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
+LS S L +L+ GR IH+ + + V ALI MY++ G I+ A VF + +
Sbjct: 417 TMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWK 476
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
RD T+ S+I LA HG EA+ +F M+ GI+P +T+VGVL+AC+H GLV+ G
Sbjct: 477 RDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSY 536
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+ M + I P HY C++DL R G +EA+ FI NM I PD I GSLL++CK+H
Sbjct: 537 YNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHK 596
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
++L E A+RLL +SG Y L+N Y++ G+W+ A IR MK+ GV+K+ G S +
Sbjct: 597 NVELAEVAAERLLLIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWV 656
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
++ N++H F + D HPQR+ IY+ M ++ + +K G+ P TE VLHD+E+ KE L+
Sbjct: 657 QIKNKVHIFGVDDGLHPQRDAIYEMMAKIWKEIKKMGFVPDTESVLHDLEEELKEQILSH 716
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GLI T TT+R++KNLRVCNDCHS IK I+ + R+IIVRD RFHHF+N
Sbjct: 717 HSEKLAIAFGLICTPENTTLRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKN 776
Query: 480 GTCSCGDYW 488
G CSC DYW
Sbjct: 777 GLCSCRDYW 785
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 192/386 (49%), Gaps = 51/386 (13%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ IH +++K GL L+ Y K G DA ++FDEMP V + ++++ Y
Sbjct: 32 GKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMP-VKSVFSWNIILSGYA 90
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G +E A VF + D+V WTAMI G + G+ A+ +FREM D+V P + T+
Sbjct: 91 KGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTN 150
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD--------------- 166
VL++C+ + L +GR +HS++ KH + V +L+NMY++ GD
Sbjct: 151 VLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKS 210
Query: 167 ----------------IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI- 209
+D A FE+M ERDV ++N++I+G HG EA+++F +M+
Sbjct: 211 TSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLM 270
Query: 210 NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI----VDLLSR 265
+ +P K T L+AC++ + LG +I + R + + +G + + + S+
Sbjct: 271 DSSSKPDKFTLASALSACANLENLKLGKQIHAHIIR-----TEFDTFGAVGNALISMYSK 325
Query: 266 VGRPEEAYDFITNMKIAP-DHIMLGSLLSACKIHGKLQLGE-QIAKRLLDC-RSADSGTY 322
G E A I I+ D I +LL G ++LG+ A+R+ D R D +
Sbjct: 326 SGGVEIAQKIIEQSMISNLDVIAFTALLD-----GYVKLGDINPARRIFDSLRVRDVVAW 380
Query: 323 VLLSNAYASSGKWKEAVQI-RAKMKE 347
+ Y +G ++A+++ R+ +KE
Sbjct: 381 TAMIVGYVQNGFNQDAMELFRSMIKE 406
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/487 (41%), Positives = 299/487 (61%), Gaps = 1/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ H V + GL + ++++Y KCG+ + A ++FD M VV +I V
Sbjct: 343 GKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSN-KTVVTWNSLIAGLV 401
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G +E A +F + + V W MI +V+ A+DL REMQ ++ + VT+V
Sbjct: 402 RDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVG 461
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+ SAC LGAL+L +WI++Y+ K+ I ++ +G AL++M+SRCGD A++VFE M++RD
Sbjct: 462 IASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRD 521
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V+ + + I A+ G + A+E+F EM+ Q ++ FV +L A SHGG VD G ++F
Sbjct: 522 VSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFW 581
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+M + +G+ PQI HYGC+VDLL R G EEA+D + +M I P+ ++ GS L+AC+ H +
Sbjct: 582 AMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNV 641
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+ +++ G +VLLSN YAS+GKW + ++R +MKE G QK G SSIEV
Sbjct: 642 EFANYADEKITQLAPEKVGIHVLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEV 701
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ I EF GD H + QI +QE+ + GY P T VL D+++ EKE L+ HS
Sbjct: 702 HGLIREFTSGDESHTENAQIGLMLQEINCRISQVGYVPDTTNVLVDVDEQEKEHLLSRHS 761
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ YGLI+T IRVVKNLR+C+DCHS KL++ + R+I VRD NR+H F+ G
Sbjct: 762 EKLAMAYGLINTGKGIPIRVVKNLRMCSDCHSFAKLVSKLYGREITVRDNNRYHFFKEGF 821
Query: 482 CSCGDYW 488
CSC D+W
Sbjct: 822 CSCRDFW 828
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 173/356 (48%), Gaps = 43/356 (12%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG ++HG V+K+GL + L+ Y CG+ ++FDEM E
Sbjct: 140 EGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLE-------------- 185
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++ V WT++I+G A+ LF EM V PN VT+V
Sbjct: 186 ------------------RNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMV 227
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
C +SAC++L LELG+ + + M + + N +V AL++MY +CGD+ ++F+E ++
Sbjct: 228 CAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDK 287
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
++ YN++++ HG + E + + EM+ +G RP KVT + + AC+ G + +G
Sbjct: 288 NLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSH 347
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACKI 297
+ R+ G+E I+D+ + G+ E A +D ++N + + SL++
Sbjct: 348 AYVFRN-GLERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTV----VTWNSLIAGLVR 402
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
G+L+L +I + + T + A + ++EA+ + +M+ G++ +
Sbjct: 403 DGELELALRIFGEMPESNLVSWNTMI---GAMVQASMFEEAIDLLREMQNQGIKGD 455
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 188/384 (48%), Gaps = 78/384 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++ + +LG++SN L+++Y KCG+ ++FDE + N V+ +T+M N YV
Sbjct: 242 GKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSN-YV 300
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+HGL GE+ LD EM + RP++VT++
Sbjct: 301 QHGLA----------------------------GEVLVVLD---EMLQKGQRPDKVTMLS 329
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
++AC+QLG L +G+ H+Y+ ++ ++ + A+I+MY +CG + A +VF+ M +
Sbjct: 330 TIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNKT 389
Query: 182 VTTYNSLIAGL-----------------------------AMHGRSI--EAVEMFREMIN 210
V T+NSLIAGL AM S+ EA+++ REM N
Sbjct: 390 VVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQN 449
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
QGI+ +VT VG+ +AC + G +DL I+ + ++ I ++ +VD+ SR G P
Sbjct: 450 QGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKN-DIHIDMQLGTALVDMFSRCGDPL 508
Query: 271 EAYDFITNMKIAPDHIMLGSLLSACKI-------HGKLQLGEQIAKRLLDCRSADSGTYV 323
A NM+ + + +A ++ G ++L +++ K+ D + AD +V
Sbjct: 509 NAMRVFENMEKRD----VSAWTAAIRVKAVEGNAKGAIELFDEMLKQ--DVK-ADDFVFV 561
Query: 324 LLSNAYASSGKWKEAVQIRAKMKE 347
L A++ G + Q+ M++
Sbjct: 562 ALLTAFSHGGYVDQGRQLFWAMEK 585
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 80/191 (41%), Gaps = 39/191 (20%)
Query: 167 IDKALQVFEEMKERDVTTY--NSLIAGLAMHGRSIEAVEMFREMI-NQGIRPTKVTFVGV 223
++ AL F+E + + Y N+LI G A G EA+ ++ MI GI P TF +
Sbjct: 69 LNYALNAFKEDEGTKCSLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFL 128
Query: 224 LNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAP 283
L+ACS + M G++ + + M +
Sbjct: 129 LSACS------------KIMAFSEGVQ---------------------VHGVVVKMGLVK 155
Query: 284 DHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRA 343
D + SL+ GK+ LG ++ +L+ R+ S T ++ N Y+ KEAV +
Sbjct: 156 DLFVANSLIHFYAACGKVDLGRKVFDEMLE-RNVVSWTSLI--NGYSVVNMAKEAVCLFF 212
Query: 344 KMKEAGVQKEP 354
+M E GV+ P
Sbjct: 213 EMVEVGVEPNP 223
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/487 (41%), Positives = 294/487 (60%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR IH QV++ GL ++ LV +Y CG KD
Sbjct: 448 GRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKD------------------------- 482
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
A +VF R+ +D V + AMI G + AL LF +Q + ++P++VT +
Sbjct: 483 -------ARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYIN 535
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+AC+ G+LE R IH+ + K + VG AL++ Y++CG A VFE+M +R+
Sbjct: 536 MLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRN 595
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++N++I G A HGR +A+++F M +G++P VTFV +L+ACSH GL++ G F
Sbjct: 596 VISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFC 655
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM++D+ I P IEHYGC+VDLL R G+ +EA I M + + G+LL AC+IHG +
Sbjct: 656 SMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNV 715
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+ E+ A+ L ++ YV LS+ YA++G W A ++R M++ GV KEPG S I+V
Sbjct: 716 PVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQV 775
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+++H F+ D HPQ E+IY ++ L +K++GY P T V+HD+++ EKE A+ HS
Sbjct: 776 GDKLHYFVAEDRSHPQSEKIYAELDRLTHAMKMKGYVPDTRSVMHDVDEGEKENAVCHHS 835
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ERLAI YGLIST P T I + KNLRVC DCH+ K I+ I R+II RD NRFHHF++G
Sbjct: 836 ERLAIAYGLISTPPGTRIHIFKNLRVCPDCHTATKFISKIVDREIIARDVNRFHHFKDGV 895
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 896 CSCGDYW 902
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 162/343 (47%), Gaps = 75/343 (21%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIH +V K G S+ + L+ +Y +CG KD
Sbjct: 347 GKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKD------------------------- 381
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
A VF ++ KD + WTAMI GL ++G A AL +++EMQ+ V PN VT
Sbjct: 382 -------ARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTS 434
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+ACS ALE GR IH + + + + VG L+NMYS CG + A QVF+ M +RD
Sbjct: 435 ILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRD 494
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI-- 239
+ YN++I G A H EA+++F + +G++P KVT++ +LNAC++ G ++ EI
Sbjct: 495 IVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHT 554
Query: 240 ---------------------------------FQSMTRDYGIEPQIEHYGCIVDLLSRV 266
F+ MT+ I + I+ ++
Sbjct: 555 LVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVIS-----WNAIIGGSAQH 609
Query: 267 GRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQ 306
GR ++A MK + PD + SLLSAC G L+ G +
Sbjct: 610 GRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRR 652
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 172/351 (49%), Gaps = 39/351 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H ++L G S+ + LV++Y KCG +KD Q
Sbjct: 246 GKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQ---------------------- 283
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
VF ++ +D + W MI GL G A +++ +MQR+ V PN++T V
Sbjct: 284 ----------VFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVI 333
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+AC AL G+ IHS + K + V ALI+MYSRCG I A VF++M +D
Sbjct: 334 LLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKD 393
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ ++I GLA G EA+ +++EM G+ P +VT+ +LNACS ++ G I Q
Sbjct: 394 VISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQ 453
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIH 298
+ + G+ +V++ S G ++A +D + I + M+G +
Sbjct: 454 QVV-EAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGK 512
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
L+L +++ + L D TY+ + NA A+SG + A +I +++ G
Sbjct: 513 EALKLFDRLQEEGL---KPDKVTYINMLNACANSGSLEWAREIHTLVRKGG 560
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 179/376 (47%), Gaps = 39/376 (10%)
Query: 8 QVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMINCYVEHG 64
Q+ + GL +R+T + + G + ++ + + DV + ++N Y + G
Sbjct: 116 QMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCG 175
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
+E A EVF +++ K V WT I G G A ++F++M+++ V PN +T + VL+
Sbjct: 176 SIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLN 235
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
A S AL+ G+ +HS + + + VG AL+ MY++CG QVFE++ RD+
Sbjct: 236 AFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIA 295
Query: 185 YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT 244
+N++I GLA G EA E++ +M +G+ P K+T+V +LNAC + + G EI +
Sbjct: 296 WNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVA 355
Query: 245 RDYGIEPQIEHYGCIVDLLSRVGRPEEA-------------------------------- 272
+ G I ++ + SR G ++A
Sbjct: 356 KA-GFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEAL 414
Query: 273 --YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSA-DSGTYVLLSNAY 329
Y + + P+ + S+L+AC L+ G +I +++++ A D+ L N Y
Sbjct: 415 TVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMY 474
Query: 330 ASSGKWKEAVQIRAKM 345
+ G K+A Q+ +M
Sbjct: 475 SMCGSVKDARQVFDRM 490
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 182/375 (48%), Gaps = 45/375 (12%)
Query: 13 GLRSNRSTRLKLVELYGKCGEFKDAM------QLFDEMPECNDVVASTVMINCYVEHGLV 66
G + N S +K+++ +C E KD + Q + D +IN Y++ G +
Sbjct: 18 GAQVNSSDYMKMLK---RCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSI 74
Query: 67 ENAFEVFSRVKVKDTV--CWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
E A +V+ ++ + W AM+ G ++ G + +AL L R+MQ+ + P+ TI+ LS
Sbjct: 75 EEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLS 134
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
+C GALE GR IH + + + V ++NMY++CG I++A +VF++M+++ V +
Sbjct: 135 SCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVS 194
Query: 185 YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HGGLV 233
+ I G A GRS A E+F++M +G+ P ++T++ VLNA S H ++
Sbjct: 195 WTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRIL 254
Query: 234 DLGFE----IFQSMTRDYG---------------IEPQIEHYGCIVDLLSRVGRPEEAYD 274
+ G E + ++ + Y + + + ++ L+ G EEA +
Sbjct: 255 NAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASE 314
Query: 275 FITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNAYA 330
M+ + P+ I LL+AC L G++I R+ ++D G L + Y+
Sbjct: 315 VYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYS 374
Query: 331 SSGKWKEAVQIRAKM 345
G K+A + KM
Sbjct: 375 RCGSIKDARLVFDKM 389
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 136/284 (47%), Gaps = 40/284 (14%)
Query: 100 ALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALIN 159
A+D+ + +Q+ + N + +L C ++ L GR +H ++ +HR + ALIN
Sbjct: 7 AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66
Query: 160 MYSRCGDIDKALQVFEEMK--ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTK 217
MY +CG I++A QV++++ ER V ++N+++ G +G +A+++ R+M G+ P +
Sbjct: 67 MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126
Query: 218 VTFVGVLNACSHGGLVDLGFEI-FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFI 276
T + L++C G ++ G EI FQ+M G+ ++ CI+++ ++ G EEA +
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAM--QAGLLFDVKVANCILNMYAKCGSIEEAREVF 184
Query: 277 TNMK----------------------------------IAPDHIMLGSLLSACKIHGKLQ 302
M+ + P+ I S+L+A L+
Sbjct: 185 DKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALK 244
Query: 303 LGEQIAKRLLDC-RSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
G+ + R+L+ +D+ L YA G +K+ Q+ K+
Sbjct: 245 WGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKL 288
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/489 (42%), Positives = 300/489 (61%), Gaps = 33/489 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
+++H QV+K G + + + L+ Y KC E DA +LF M
Sbjct: 313 AKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMM----------------- 355
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTIV 120
HG V++ V WTA+I G V+NG RA++LF +M+R+ V PNE T
Sbjct: 356 -HG-------------VQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFS 401
Query: 121 CVLSACSQ-LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
VL+AC+ ++E G+ HS K V AL+ MY++ G+I+ A +VF+ +
Sbjct: 402 SVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVD 461
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
RD+ ++NS+I+G A HG +++++F EM ++ + +TF+GV++AC+H GLV+ G
Sbjct: 462 RDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRY 521
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F M +DY I P +EHY C+VDL SR G E+A D I M + +LL+AC++H
Sbjct: 522 FDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHL 581
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+QLGE A++L+ + DS YVLLSN YA++G W+E ++R M V+KE G S I
Sbjct: 582 NVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWI 641
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
EV N+ F+ GD+ HPQ ++IY K++EL +K GY P T+ VLHD+E+ KE L+
Sbjct: 642 EVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQ 701
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSERLAI +GLI+T P T I++VKNLRVC DCH++IKLI+ I R I+VRD NRFHHF+
Sbjct: 702 HSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKG 761
Query: 480 GTCSCGDYW 488
G+CSCGDYW
Sbjct: 762 GSCSCGDYW 770
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 106/181 (58%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV T +++ Y++ VE+ VF ++VK+ V WT+++ G +NG +AL LF +MQ
Sbjct: 126 DVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQ 185
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ ++PN T VL + GA+E G +H+ + K +D VG +++NMYS+ +
Sbjct: 186 LEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVS 245
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A VF+ M+ R+ ++NS+IAG +G +EA E+F M +G++ T+ F V+ C+
Sbjct: 246 DAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCA 305
Query: 229 H 229
+
Sbjct: 306 N 306
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 123/246 (50%), Gaps = 3/246 (1%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
M+N Y + +V +A VF ++ ++ V W +MI G V NG A +LF M+ + V+
Sbjct: 234 MVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLT 293
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
+ V+ C+ + + + +H + K+ D + + AL+ YS+C +ID A ++F
Sbjct: 294 QTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFC 353
Query: 176 EMKE-RDVTTYNSLIAGLAMHGRSIEAVEMFREM-INQGIRPTKVTFVGVLNACSHGGLV 233
M ++V ++ ++I+G +GR+ A+ +F +M +G+ P + TF VLNAC+
Sbjct: 354 MMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTAS 413
Query: 234 DLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLS 293
+ F S + G + +V + ++ G E A + + ++ D + S++S
Sbjct: 414 VEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANE-VFKRQVDRDLVSWNSMIS 472
Query: 294 ACKIHG 299
HG
Sbjct: 473 GYAQHG 478
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 104/204 (50%), Gaps = 4/204 (1%)
Query: 93 RNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHI 152
RN + AL+LF ++R + ++ CVL C L +G+ +H K +
Sbjct: 69 RNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVS 128
Query: 153 VGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG 212
VG +L++MY + ++ +VF+EM+ ++V ++ SL+AG +G + +A+++F +M +G
Sbjct: 129 VGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEG 188
Query: 213 IRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSR---VGRP 269
I+P TF VL + G V+ G ++ +M G++ I +V++ S+ V
Sbjct: 189 IKPNPFTFAAVLGGLAADGAVEKGVQV-HTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDA 247
Query: 270 EEAYDFITNMKIAPDHIMLGSLLS 293
+ +D + N + M+ ++
Sbjct: 248 KAVFDSMENRNAVSWNSMIAGFVT 271
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/523 (39%), Positives = 314/523 (60%), Gaps = 42/523 (8%)
Query: 1 EGREIHGQVLKLGLRSNRS--TRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMIN 58
E REI ++ S RS T +V YG+ DA ++FD MPE +V + T M+
Sbjct: 190 EAREIFDEM------SERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEV-SWTSMLM 242
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARA------------------ 100
YV++G +E+A E+F + VK + AMI GL + GE+A+A
Sbjct: 243 GYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTV 302
Query: 101 -------------LDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRI 147
LDLF MQ+ VRP T++ +LS C+ L +L G+ +H+ + + +
Sbjct: 303 IKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQF 362
Query: 148 DLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
D++ V L+ MY +CG++ K+ +F+ +D+ +NS+I+G A HG EA+++F E
Sbjct: 363 DVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCE 422
Query: 208 M-INQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRV 266
M ++ +P +VTFV L+ACS+ G+V+ G +I++SM +G++P HY C+VD+L R
Sbjct: 423 MPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRA 482
Query: 267 GRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLS 326
GR EA + I +M + PD + GSLL AC+ H +L + E AK+L++ +SGTY+LLS
Sbjct: 483 GRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLS 542
Query: 327 NAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIR-HPQREQIYKKM 385
N YAS G+W + ++R MK V+K PGCS EV N++H F G I HP++E I K +
Sbjct: 543 NMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKIL 602
Query: 386 QELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNL 445
EL +++ GY+P LHD+++ EK +L HSERLA+ Y L+ IRV+KNL
Sbjct: 603 DELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNL 662
Query: 446 RVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
RVC+DCH+ IK+I+ + +R+II+RD NRFHHF NG CSC DYW
Sbjct: 663 RVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 141/303 (46%), Gaps = 22/303 (7%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
LV Y K GE +A ++FD MPE N VV+ T ++ YV +G V+ A +F ++ K+ V
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPERN-VVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVS 143
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
WT M+ G +++G + A L+ EM D + + ++ + G ++ R I M
Sbjct: 144 WTVMLIGFLQDGRIDDACKLY-EMIPDK---DNIARTSMIHGLCKEGRVDEAREIFDEMS 199
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
+ + I ++ Y + +D A ++F+ M E+ ++ S++ G +GR +A E
Sbjct: 200 ERSV----ITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEE 255
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
+F M ++P + +++ G + +F SM E + ++ +
Sbjct: 256 LFEVM---PVKPV-IACNAMISGLGQKGEIAKARRVFDSMK-----ERNDASWQTVIKIH 306
Query: 264 SRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG 320
R G EA D M+ + P L S+LS C L G+Q+ +L+ C+ D
Sbjct: 307 ERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQ-FDVD 365
Query: 321 TYV 323
YV
Sbjct: 366 VYV 368
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 9/132 (6%)
Query: 148 DLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
D N I L++ Y + G+ID+A +VF+ M ER+V ++ +L+ G +G+ A +F +
Sbjct: 76 DRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWK 135
Query: 208 MINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
M + V +G L G +D ++++ + I +G L + G
Sbjct: 136 MPEKNKVSWTVMLIGFL----QDGRIDDACKLYEMIPDKDNIARTSMIHG-----LCKEG 186
Query: 268 RPEEAYDFITNM 279
R +EA + M
Sbjct: 187 RVDEAREIFDEM 198
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/490 (41%), Positives = 307/490 (62%), Gaps = 4/490 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFD--EMPECNDVVASTVMINC 59
G++IH +++ + + L+ +Y K G + A ++ + P N V+A T +++
Sbjct: 297 GKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLN-VIAFTSLLDG 355
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
Y + G ++ A +F +K +D V WTAMI G +NG ++ AL LFR M R+ +PN T+
Sbjct: 356 YFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTL 415
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM-K 178
VLS S L +L+ G+ +H+ + + VG ALI MYSR G I A ++F +
Sbjct: 416 AAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICS 475
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
RD T+ S+I LA HG EA+E+F +M+ ++P +T+VGVL+AC+H GLV+ G
Sbjct: 476 YRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKS 535
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
F M + IEP HY C++DLL R G EEAY+FI NM I PD + GSLLS+C++H
Sbjct: 536 YFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVH 595
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
+ L + A++LL +SG Y+ L+N ++ GKW++A ++R MK+ V+KE G S
Sbjct: 596 KYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSW 655
Query: 359 IEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALA 418
+++ N++H F + D HPQR+ IY + ++ + +K G+ P T VLHD+E KE L
Sbjct: 656 VQIKNKVHIFGVEDALHPQRDAIYCMISKIWKEIKKMGFIPDTNSVLHDLEQEVKEQILR 715
Query: 419 IHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFE 478
HSE+LAI + LI+T +TT+R++KNLRVCNDCHS I+ I+ + +R+IIVRD RFHHF+
Sbjct: 716 HHSEKLAIAFALINTPKHTTVRIMKNLRVCNDCHSAIRYISLLVEREIIVRDATRFHHFK 775
Query: 479 NGTCSCGDYW 488
+G+CSC DYW
Sbjct: 776 DGSCSCQDYW 785
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 178/384 (46%), Gaps = 55/384 (14%)
Query: 2 GREIHGQVLKLGLRS-NRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
GR IH +++K GLR L+ LY K G DA +LFDEMP +T++ + +
Sbjct: 31 GRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTIL-SAH 89
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ G +++A VF + D+V WT MI G G A+ F M + P + T
Sbjct: 90 AKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFT 149
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL++C+ AL++G+ +HS++ K V +L+NMY++CGD A VF+ M+ +
Sbjct: 150 NVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLK 209
Query: 181 DVTTYNSLIAGLAMHGRSIE---AVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
D +T+N++I +MH + + A+ +F +M + P V++ ++ H G
Sbjct: 210 DTSTWNTMI---SMHMQFCQFDLALALFDQMTD----PDIVSWNSIITGYCHQGYDIRAL 262
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
E F M + ++P D LGS+LSAC
Sbjct: 263 ETFSFMLKSSSLKP--------------------------------DKFTLGSVLSACAN 290
Query: 298 HGKLQLGEQIAKRLL--DCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
L+LG+QI ++ D A + L+S YA SG AV++ ++ E + P
Sbjct: 291 RESLKLGKQIHAHIVRADVDIAGAVGNALIS-MYAKSG----AVEVAHRIVE--ITGTPS 343
Query: 356 CSSIEVNNEIH-EFILGDIRHPQR 378
+ I + + F +GDI P R
Sbjct: 344 LNVIAFTSLLDGYFKIGDID-PAR 366
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 155/332 (46%), Gaps = 36/332 (10%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H V+KLG L+ +Y KCG+ A +FD M D MI+ ++
Sbjct: 164 GKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRM-RLKDTSTWNTMISMHM 222
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPNEVTIV 120
+ + A +F ++ D V W ++I G G RAL+ F M + +++P++ T+
Sbjct: 223 QFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLG 282
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC---------------- 164
VLSAC+ +L+LG+ IH+++ + +D+ VG ALI+MY++
Sbjct: 283 SVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTP 342
Query: 165 -----------------GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
GDID A +F+ +K RDV + ++I G A +G +A+ +FR
Sbjct: 343 SLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRL 402
Query: 208 MINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
MI +G +P T VL+ S +D G ++ R + + ++ + SR G
Sbjct: 403 MIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVS-SVSVGNALITMYSRSG 461
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
++A ++ D + S++ + HG
Sbjct: 462 SIKDARKIFNHICSYRDTLTWTSMILSLAQHG 493
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/487 (40%), Positives = 302/487 (62%), Gaps = 17/487 (3%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G++IH QVLK+G+ + R L+++Y KCGE + A +F +P+ + ++ S
Sbjct: 539 GKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNS-------- 590
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
E V ++V W++M+ G V+NG AL F M V ++ T+
Sbjct: 591 ---------EESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTS 641
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V+SAC+ G LELGR +H Y+ K L+ +G ++I+MY +CG ++ A +F + K+R+
Sbjct: 642 VVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRN 701
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V + S+I+G A+HG+ EAV +F MIN+GI P +V+FVGVL ACSH GL++ G + F+
Sbjct: 702 VVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFR 761
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M YGI P EH+ C+VDL R GR E +FI N I+ + S LS+C++H +
Sbjct: 762 LMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNI 821
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++G + K+LL+ D+G Y+L S+ A+ +W+EA +IR+ M++ GV+K P S I++
Sbjct: 822 EMGIWVCKKLLELEPFDAGPYILFSSICATEHRWEEAAKIRSLMQQRGVKKNPSQSWIQL 881
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N++H F++GD HPQ +IY + EL +K GYS V+ D+E +++ L HS
Sbjct: 882 KNQVHSFVMGDRSHPQDTKIYSYLDELIGRLKEIGYSTDVTPVMQDVEQEQRQVLLGYHS 941
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI YG+IST P T IRV+KNLRVC DCH+ IK + + R+II+RD +RFHHF++G
Sbjct: 942 EKLAIAYGIISTAPGTPIRVMKNLRVCIDCHNFIKYASELLGREIIIRDIHRFHHFKHGH 1001
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 1002 CSCADYW 1008
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 165/315 (52%), Gaps = 20/315 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ IHG +L+ GL + +++ Y KC F A +LF M E D V+ +M++ Y+
Sbjct: 407 GKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAE-KDTVSWNIMMSSYL 465
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G ++ + ++F ++ KD W MIDGL+RNG AL+L +M N++T
Sbjct: 466 QIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSI 525
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER- 180
L S L L LG+ IH+ + K + + V +LI+MY +CG+++KA +F+ + +
Sbjct: 526 ALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQES 585
Query: 181 --------------DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+ +++S+++G +GR +A++ F MI + K T V++A
Sbjct: 586 SMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSA 645
Query: 227 CSHGGLVDLGFEIFQSMTR-DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDH 285
C+ G+++LG ++ + + +G++ + I+D+ + G +A+ I N +
Sbjct: 646 CASAGVLELGRQVHGYIQKIGHGLDVFLG--SSIIDMYVKCGSLNDAW-LIFNQAKDRNV 702
Query: 286 IMLGSLLSACKIHGK 300
++ S++S C +HG+
Sbjct: 703 VLWTSMISGCALHGQ 717
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 143/332 (43%), Gaps = 80/332 (24%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
++N Y + +E A ++F + D WT +I G R G A L LF +MQ V PN
Sbjct: 327 LLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPN 386
Query: 116 EVTIVCVLSACSQ-LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC---------- 164
+ T+ VL +CS + +G+ IH ++ ++ +DL+ ++ ++++ Y +C
Sbjct: 387 QFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLF 446
Query: 165 ---------------------GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
GD+ K++ +F ++ +D ++N++I GL +G A+E
Sbjct: 447 GLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALE 506
Query: 204 MFREMINQGIRPTKVTF-VGVLNACSHG---------------GLVDLGF---------- 237
+ +M+ G K+TF + ++ A S G++D GF
Sbjct: 507 LLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYC 566
Query: 238 ---------EIFQSMTRDYGIEPQIE----------HYGCIVDLLSRVGRPEEA---YDF 275
IF+ + ++ + E + +V + GR E+A + F
Sbjct: 567 KCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSF 626
Query: 276 ITNMKIAPDHIMLGSLLSACKIHGKLQLGEQI 307
+ ++ D L S++SAC G L+LG Q+
Sbjct: 627 MICSQVEVDKFTLTSVVSACASAGVLELGRQV 658
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 98/213 (46%), Gaps = 34/213 (15%)
Query: 152 IVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ 211
I G L+N+Y++ ++++A ++FEE+ + DV ++ LI+G A G S + + +F +M +Q
Sbjct: 322 IRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQ 381
Query: 212 GIRPTKVTFVGVLNACS------------HGGLVDLGFE---IFQSMTRDYGIEPQIEHY 256
G+ P + T VL +CS HG ++ G + + + DY ++ +
Sbjct: 382 GVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCR---- 437
Query: 257 GCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRS 316
C G E+ + + +IM+ S L + + L Q+ +
Sbjct: 438 -CF-------GYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGK------ 483
Query: 317 ADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
D+ ++ + + +G + A+++ KM AG
Sbjct: 484 -DAASWNTMIDGLMRNGCERVALELLYKMVAAG 515
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/489 (40%), Positives = 301/489 (61%), Gaps = 2/489 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN-DVVASTVMINCY 60
G+++H +L+ G+ + L+ Y K G + A ++ D+ + +V++ T ++ Y
Sbjct: 315 GKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGY 374
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V+ G + A EVF + +D + WTAMI G +NG+ A++LFR M R PN T+
Sbjct: 375 VKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLA 434
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSAC+ L L G+ IH + + + V A+I +Y+R G + A +VF+++ R
Sbjct: 435 AVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWR 494
Query: 181 -DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+ T+ S+I LA HG +A+ +F EM+ G++P +VT++GV +AC+H G +D G
Sbjct: 495 KETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRY 554
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
++ M ++GI P++ HY C+VDLL+R G EA++FI M +APD ++ GSLL+AC++
Sbjct: 555 YEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRK 614
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
L E A++LL +SG Y L+N Y++ G+W +A +I K+ V+KE G S
Sbjct: 615 NADLAELAAEKLLSIDPDNSGAYSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWT 674
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
V +++H F D+ HPQR+ I KK E+ + +K G+ P VLHD++D KE L+
Sbjct: 675 HVQSKVHVFGADDVLHPQRDAICKKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSR 734
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GLIST TT+R++KNLRVCNDCH+ IK I+ + R+IIVRD RFHHF +
Sbjct: 735 HSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISKVVDREIIVRDATRFHHFRD 794
Query: 480 GTCSCGDYW 488
G CSC DYW
Sbjct: 795 GYCSCKDYW 803
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 160/349 (45%), Gaps = 42/349 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGE----FKDAMQLFDEMPECN-DVVASTVM 56
GR IH +K GL + L+ Y + G F +A +LFD++P + +
Sbjct: 44 GRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTWNSL 103
Query: 57 INCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
++ Y + G + +A VF+++ +D V WT M+ GL R G A+ F +M + + P++
Sbjct: 104 LSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQ 163
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
+ VLS+C+ A +GR +HS++ K + V +++ MY +CGD + A VFE
Sbjct: 164 FMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFER 223
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
MK R +++N++++ GR A+ MF M + I V++ ++ + GL D+
Sbjct: 224 MKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSI----VSWNAIIAGYNQNGLDDMA 279
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
+ F M +T + PD + S+LSAC
Sbjct: 280 LKFFSRM--------------------------------LTASSMEPDEFTVTSVLSACA 307
Query: 297 IHGKLQLGEQIAKRLLDCRSADSGTYV-LLSNAYASSGKWKEAVQIRAK 344
L++G+Q+ +L S + L + YA SG + A +I K
Sbjct: 308 NLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDK 356
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/526 (39%), Positives = 300/526 (57%), Gaps = 43/526 (8%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+IHG K+GL S LV +YGKCG +A + DEM DVV+ ++ Y
Sbjct: 159 GRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSR-RDVVSWNSLVVGYA 217
Query: 62 EHGLVENAFEV-------------------------------------FSRVKVKDTVCW 84
++ ++A EV F ++ K V W
Sbjct: 218 QNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSW 277
Query: 85 TAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGK 144
MI ++N A++L+ M+ D P+ V+I VL AC AL LG+ IH Y+ +
Sbjct: 278 NVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIER 337
Query: 145 HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEM 204
++ N ++ ALI+MY++CG ++KA VFE MK RDV ++ ++I+ GR +AV +
Sbjct: 338 KKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVAL 397
Query: 205 FREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLS 264
F ++ + G+ P + FV L ACSH GL++ G F+ MT Y I P++EH C+VDLL
Sbjct: 398 FSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLG 457
Query: 265 RVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVL 324
R G+ +EAY FI +M + P+ + G+LL AC++H +G A +L SG YVL
Sbjct: 458 RAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVL 517
Query: 325 LSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKK 384
LSN YA +G+W+E IR MK G++K PG S++EVN IH F++GD HPQ ++IY++
Sbjct: 518 LSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRE 577
Query: 385 MQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTK-----PYTTI 439
+ L + +K GY P +E LHD+E+ +KE LA+HSE+LAI + L++TK TI
Sbjct: 578 LDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTI 637
Query: 440 RVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCG 485
R+ KNLR+C DCH KLI+ IT R+II+RD NRFH F G CSC
Sbjct: 638 RITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCA 683
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 171/385 (44%), Gaps = 74/385 (19%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
R +H +++ LR N S +KL+ Y + A ++FDE+PE N ++IN
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERN-----VIIIN---- 109
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
MI V NG + +F M NVRP+ T CV
Sbjct: 110 -----------------------VMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCV 146
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L ACS G + +GR IH K + VG L++MY +CG + +A V +EM RDV
Sbjct: 147 LKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDV 206
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF--EIF 240
++NSL+ G A + R +A+E+ REM + I T +L A S+ ++ + ++F
Sbjct: 207 VSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMF 266
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSAC-- 295
M + + + ++ + + P EA + + M+ PD + + S+L AC
Sbjct: 267 FKMGK-----KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGD 321
Query: 296 --------KIHGKLQLGEQIAKRLL----------------------DCRSADSGTYVLL 325
KIHG ++ + I LL + +S D ++ +
Sbjct: 322 TSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAM 381
Query: 326 SNAYASSGKWKEAVQIRAKMKEAGV 350
+AY SG+ +AV + +K++++G+
Sbjct: 382 ISAYGFSGRGCDAVALFSKLQDSGL 406
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/528 (39%), Positives = 300/528 (56%), Gaps = 43/528 (8%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY- 60
G +HGQV++ G S+ LV++Y KCGE DA ++FD M DVV T MI Y
Sbjct: 151 GEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRML-IRDVVCWTAMITLYE 209
Query: 61 ---------------VEHGL-----------------------VENAFEVFSRVKVKDTV 82
E G + A VF R++ ++ +
Sbjct: 210 QAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISRARLVFDRMEERNGI 269
Query: 83 CWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM 142
W +M+ G +NG AL LF +MQ PN VT + ++SACS LG+ LGR +H+++
Sbjct: 270 SWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFV 329
Query: 143 GKHRIDLNHIVGGALINMYSRCGDIDKALQVFE--EMKERDVTTYNSLIAGLAMHGRSIE 200
++D++ + A+++MY +CGD+D A+++F E+ ERDV+++N LI+G +HG E
Sbjct: 330 ISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKE 389
Query: 201 AVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIV 260
A+E+F M +G+ P +TF +L+ACSH GL+D G + F MT+ + P+++HY C+V
Sbjct: 390 ALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTK-LSVRPEMKHYACMV 448
Query: 261 DLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG 320
D+L R G EA+ I + P + G+LL AC+IHG +LGE A L +G
Sbjct: 449 DMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTG 508
Query: 321 TYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQ 380
YVL+SN YA+S KWKE +R MK G++K S IE E+H F D P +
Sbjct: 509 YYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYRE 568
Query: 381 IYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIR 440
+Y+K++ L +K+ GY P VLHD+E +KE L HSE+LA+ +G++ I+
Sbjct: 569 VYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQ 628
Query: 441 VVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
V KNLRVC+DCH K I++I RKIIVRD NRFHHF+ G CSCGDYW
Sbjct: 629 VTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 676
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 139/328 (42%), Gaps = 39/328 (11%)
Query: 23 KLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTV 82
+L+ LY K G+ A LFD + N+F +
Sbjct: 63 RLIILYSKLGDLHSARTLFDHRHHHHHGHTQA------------PNSF-----------L 99
Query: 83 CWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSAC-SQLGALELGRWIHSY 141
C T M+ G A+DL+ MQR V N T VL C S+LGA+ G +H
Sbjct: 100 CNT-MLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAV-FGEVVHGQ 157
Query: 142 MGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEA 201
+ + + V AL++MY++CG+I A +VF+ M RDV + ++I R ++A
Sbjct: 158 VVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKA 217
Query: 202 VEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE----IFQSMTRDYGIEPQIEHYG 257
+ +FR+M +G ++T + V +A G + +F M GI +
Sbjct: 218 LMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISRARLVFDRMEERNGIS-----WN 272
Query: 258 CIVDLLSRVGRPEEAYDFITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC 314
++ ++ GRP +A M+ + P+ + ++SAC G LG ++ ++
Sbjct: 273 SMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISS 332
Query: 315 R-SADSGTYVLLSNAYASSGKWKEAVQI 341
+ D+ + + Y G AV++
Sbjct: 333 KMDIDTTLRNAIMDMYMKCGDLDTAVEM 360
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/491 (39%), Positives = 297/491 (60%), Gaps = 5/491 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLK----LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMI 57
G+E+H LK + L+ Y KCG+ A ++F++MPE D+V+ +++
Sbjct: 308 GKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPE-RDLVSWNIIL 366
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ YV ++ A F+ + K+ + W MI GL + G AL F M+ P +
Sbjct: 367 SGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDY 426
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+ +CS LG+L+ GR +H+ + ++ + + G ALI MY+RCG +D A +F M
Sbjct: 427 AFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINM 486
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
D ++N++IA L HG+ +A+E+F EM+ +GI P +++F+ V++ACSH GLV G
Sbjct: 487 PCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGR 546
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
+ F SM YG+ P EHY I+DLL R G+ EA + + +M P + +LL+ C+I
Sbjct: 547 KYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRI 606
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
HG + LG + A+RL + + GTYVLLSN YA +G+W + ++R M++ GV+KEPGCS
Sbjct: 607 HGNIDLGIEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCS 666
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IEV N++H F++GD HP+ QIY +++L ++ GY P T+ VLHD+E KE L
Sbjct: 667 WIEVENKVHSFLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPDTKCVLHDVESDLKEHEL 726
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
+ HSE+LA+ YG + T+RV KNLR+C DCH+ K ++ + R+I+VRD RFHHF
Sbjct: 727 STHSEKLAVAYGFMKLPHGATVRVFKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHF 786
Query: 478 ENGTCSCGDYW 488
+G CSCGDYW
Sbjct: 787 RDGKCSCGDYW 797
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 159/355 (44%), Gaps = 51/355 (14%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGE---------FKDAMQLFDEMPECNDVVAS 53
+++H V+K G S L+ Y KC +A +LFDEMP D ++
Sbjct: 168 QQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPN-RDELSW 226
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
T +I YV++ ++ A E + K V W AMI G G A ++FR+M ++
Sbjct: 227 TTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQ 286
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGK----HRIDLNHIVGGALINMYSRCGDIDK 169
+E T V+S C+ G LG+ +H+Y K D+ V ALI Y +CG +D
Sbjct: 287 LDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDI 346
Query: 170 ALQVFEEMKERDVTTYN-------------------------------SLIAGLAMHGRS 198
A ++F +M ERD+ ++N +I+GLA G +
Sbjct: 347 AQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFA 406
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGC 258
EA++ F M QG P F G + +CS G + G ++ + R YG E +
Sbjct: 407 EEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVR-YGYESSLSAGNA 465
Query: 259 IVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK----LQLGEQIAK 309
++ + +R G + A+ NM D I ++++A HG+ ++L E++ K
Sbjct: 466 LITMYARCGVVDAAHCLFINMPCV-DAISWNAMIAALGQHGQGTQAIELFEEMLK 519
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 185/424 (43%), Gaps = 62/424 (14%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
R +H ++ G + +L+++Y K + A LFDE+P+ D+VA T +I Y
Sbjct: 32 ARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQ-PDIVARTTLIAAYS 90
Query: 62 EHGLVENAFEVFSRVKV--KDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
G ++ + ++FS + +D+V + AMI N + A++LF +MQRDN RP+ T
Sbjct: 91 AAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTF 150
Query: 120 VCVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGD---------IDK 169
VL A + + E + +H + K V ALI+ Y +C + +
Sbjct: 151 TSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAE 210
Query: 170 ALQVFEEMKERD-------VTTY------------------------NSLIAGLAMHGRS 198
A ++F+EM RD +T Y N++I+G A G
Sbjct: 211 ARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLY 270
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI---FQSMTRDYGIEPQIEH 255
+EA EMFR+MI I+ + TF V++ C++ G LG E+ F + + +
Sbjct: 271 LEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPV 330
Query: 256 YGCIVDLLSRVGRPEEAYDFITNMK----IAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
++ + G+ + A + M ++ + I+ G + C K E K +
Sbjct: 331 NNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNI 390
Query: 312 LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILG 371
L +++++ + A G +EA++ +MK G EP C I +LG
Sbjct: 391 L--------SWIIMISGLAQIGFAEEALKFFNRMKLQGF--EP-CDYAFAGAIISCSVLG 439
Query: 372 DIRH 375
++H
Sbjct: 440 SLKH 443
>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
Length = 610
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/458 (41%), Positives = 281/458 (61%), Gaps = 1/458 (0%)
Query: 32 GEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGL 91
G+ A LF PE D + T M++ Y++ G V+ A E F + V++ V W A++ G
Sbjct: 153 GDMGAAEDLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGY 212
Query: 92 VRNGEMARALDLFREMQRDN-VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLN 150
V+N AL +F+ M D+ V+PN T+ VL CS L AL GR +H + K + N
Sbjct: 213 VKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRN 272
Query: 151 HIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
VG +L++MY +CGD++ A +VF+EM +D+ +N++I+G A HG ++A+++F +M +
Sbjct: 273 VTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMKD 332
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
+G+ P +T + VL AC H GL D G + F++M Y IEPQI+HY C+VDLL R G E
Sbjct: 333 EGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYKIEPQIDHYSCMVDLLCRAGLLE 392
Query: 271 EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYA 330
A + I +M P G+LL+AC+++ L+ E A++L++ ++G YV L+N YA
Sbjct: 393 RAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANIYA 452
Query: 331 SSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQ 390
+ KW + ++R MK+ V K PG S +E+ HEF D HPQ I+ K+ L+
Sbjct: 453 VANKWADVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLGLIHDKLDRLQM 512
Query: 391 IVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCND 450
++K GY P + LHD+ED K L HSE+LAI +GLIST P T+R+ KNLR+C D
Sbjct: 513 LMKAMGYVPDLDFALHDVEDSLKSQMLMRHSEKLAIAFGLISTSPGMTLRIFKNLRICGD 572
Query: 451 CHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
CH+ KLI+ I R+II+RD RFHHF G CSCGDYW
Sbjct: 573 CHNAAKLISKIEDREIILRDTTRFHHFRGGHCSCGDYW 610
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 141/319 (44%), Gaps = 47/319 (14%)
Query: 34 FKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVR 93
DA +LFD +P D V+ +++C+ G ++ A VFS + VKD W M+ GL +
Sbjct: 62 LADARRLFDSIPH-PDTVSYNTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSK 120
Query: 94 NGEMARALDLFREMQ-RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHI 152
NG A +FR M R+ V N +V L+ +GA E + I
Sbjct: 121 NGASEEAAAMFRIMPVRNAVSWN--AMVAALACSGDMGAAE------DLFRNAPEKTDAI 172
Query: 153 VGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG 212
+ A+++ Y G++ KA++ F M R++ ++N+++AG + R+ +A+ +F+ M+
Sbjct: 173 LWTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDS 232
Query: 213 I-RPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEE 271
I +P T VL CS+ + G ++ H C+ LSR
Sbjct: 233 IVQPNASTLSSVLLGCSNLSALGFGRQV---------------HQWCMKLPLSR------ 271
Query: 272 AYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYAS 331
+ + + G L ACK+ ++ + +A + + + YA
Sbjct: 272 --NVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVA-------------WNAMISGYAQ 316
Query: 332 SGKWKEAVQIRAKMKEAGV 350
G +A+++ KMK+ GV
Sbjct: 317 HGGGMQAIKLFEKMKDEGV 335
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 36/213 (16%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H +KL L N + L+ +Y KCG+ DA ++FDEM D+VA MI+ Y
Sbjct: 257 GRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEM-STKDIVAWNAMISGYA 315
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+HG G M +A+ LF +M+ + V P+ +T++
Sbjct: 316 QHG------------------------------GGM-QAIKLFEKMKDEGVVPDWITLLA 344
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VL+AC G + G + + ++I+ ++++ R G +++A+ + M E
Sbjct: 345 VLTACIHTGLCDFGIQCFETMQEAYKIEPQIDHYSCMVDLLCRAGLLERAVNMIHSMPFE 404
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEM-FREMINQ 211
+ Y +L+ ++ +++E E R++I Q
Sbjct: 405 PHPSAYGTLLTACRVY-KNLEFAEFAARKLIEQ 436
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 123/302 (40%), Gaps = 24/302 (7%)
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
STV + V G + A E F+ ++K T + ++ G + + R D R +
Sbjct: 15 STVAVAAAVRRGDLAGAEEAFASTQLKTTTTYNCLLAGYAKASGLIRLADA-RRLFDSIP 73
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMG-KHRIDLNHIVGGALINMYSRCGDIDKAL 171
P+ V+ +LS G ++ R + S M K N +V G S+ G ++A
Sbjct: 74 HPDTVSYNTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSG-----LSKNGASEEAA 128
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
+F M R+ ++N+++A LA G A ++FR N + + + +++ G
Sbjct: 129 AMFRIMPVRNAVSWNAMVAALACSGDMGAAEDLFR---NAPEKTDAILWTAMVSGYMDTG 185
Query: 232 LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK----IAPDHIM 287
V E F +M + + +V + R ++A M + P+
Sbjct: 186 NVQKAMEFFGAMPVR-----NLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNAST 240
Query: 288 LGSLLSACKIHGKLQLGEQIAK---RLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAK 344
L S+L C L G Q+ + +L R+ GT +L + Y G +A ++ +
Sbjct: 241 LSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLL--SMYCKCGDLNDACKVFDE 298
Query: 345 MK 346
M
Sbjct: 299 MS 300
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/443 (44%), Positives = 284/443 (64%), Gaps = 8/443 (1%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR-DNV 112
+ +++ Y VE+ VF + + W AMI G RNG +AL LF EM + +
Sbjct: 254 SALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGL 313
Query: 113 RPNEVTIVCVLSAC-SQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
PN T+ V+ AC L A+ G+ IH+Y ++ + + VG AL++MY++CG ++ +
Sbjct: 314 LPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSR 373
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIR-----PTKVTFVGVLNA 226
+VF EM ++V T+N LI MHG+ EA+E+F+ M+ + R P +VTF+ V A
Sbjct: 374 RVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAA 433
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
CSH GL+ G +F M D+G+EP +HY C+VDLL R G+ EEAY+ + M D +
Sbjct: 434 CSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKV 493
Query: 287 -MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
SLL AC+IH ++LGE AK LL + YVLLSN Y+S+G W +A+++R M
Sbjct: 494 GAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNM 553
Query: 346 KEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVL 405
++ GV+KEPGCS IE +E+H+F+ GD+ HPQ EQ++ ++ L + ++ EGY P T VL
Sbjct: 554 RQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVL 613
Query: 406 HDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRK 465
H++++ EKE L HSE+LAI +G+++T P TTIRV KNLRVCNDCH+ K I+ I +R+
Sbjct: 614 HNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMERE 673
Query: 466 IIVRDRNRFHHFENGTCSCGDYW 488
IIVRD RFHHF+ GTCSCGDYW
Sbjct: 674 IIVRDVRRFHHFKEGTCSCGDYW 696
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 170/363 (46%), Gaps = 40/363 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLK-LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
G +IH +K G S+ T LV +YGKCG D + ++ Y
Sbjct: 111 GEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGD------------KTFTNNALMAMY 158
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ G V+++ +F +D V W MI ++ + AL FR M + V + VTI
Sbjct: 159 AKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIA 218
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDL--NHIVGGALINMYSRCGDIDKALQVFEEMK 178
VL ACS L L++G+ IH+Y+ ++ DL N VG AL++MY C ++ +VF+ +
Sbjct: 219 SVLPACSHLERLDVGKEIHAYVLRNN-DLIENSFVGSALVDMYCNCRQVESGRRVFDHIL 277
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN-QGIRPTKVTFVGVLNACSHG-GLVDLG 236
R + +N++I+G A +G +A+ +F EMI G+ P T V+ AC H + G
Sbjct: 278 GRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKG 337
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG---RPEEAYDFITNMKIAPDHIMLGSLLS 293
EI R+ + I +VD+ ++ G ++ + N + I L+
Sbjct: 338 KEIHAYAIRNM-LASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNV----ITWNVLIM 392
Query: 294 ACKIHGKLQLGEQIAKRLLDCRSADSG----------TYVLLSNAYASSGKWKEAVQIRA 343
AC +HGK + ++ K ++ A++G T++ + A + SG E + +
Sbjct: 393 ACGMHGKGEEALELFKNMV----AEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFY 448
Query: 344 KMK 346
+MK
Sbjct: 449 RMK 451
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 112/273 (41%), Gaps = 56/273 (20%)
Query: 79 KDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWI 138
+ T W + R+ + A+ + EM RP+ VL A S L L+ G I
Sbjct: 55 RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114
Query: 139 HSYMGKHRIDLNHI-VGGALINMYSRCGDI--------------------DKALQVFEEM 177
H+ K + + V L+NMY +CG I D + +FE
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESF 174
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
+RD+ ++N++I+ + R EA+ FR M+ +G+ VT VL ACSH +D+G
Sbjct: 175 VDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGK 234
Query: 238 EIFQSMTR-------------------------------DYGIEPQIEHYGCIVDLLSRV 266
EI + R D+ + +IE + ++ +R
Sbjct: 235 EIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARN 294
Query: 267 GRPEEAYD-FITNMKIA---PDHIMLGSLLSAC 295
G E+A FI +K+A P+ + S++ AC
Sbjct: 295 GLDEKALILFIEMIKVAGLLPNTTTMASVMPAC 327
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 118/256 (46%), Gaps = 34/256 (13%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+EIH ++ L S+ + LV++Y KCG + ++F+EMP N + + +++ C
Sbjct: 336 KGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACG 395
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ HG E A E+F M+ R GE +PNEVT +
Sbjct: 396 M-HGKGEEALELFKN-----------MVAEAGRGGE---------------AKPNEVTFI 428
Query: 121 CVLSACSQLGALELGRWIHSYMG-KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V +ACS G + G + M H ++ ++++ R G +++A ++ M
Sbjct: 429 TVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPA 488
Query: 180 R--DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVT-FVGVLNACSHGGLVDLG 236
V ++SL+ +H +++E E+ + + + P + +V + N S GL +
Sbjct: 489 EFDKVGAWSSLLGACRIH-QNVELGEVAAKNLLH-LEPNVASHYVLLSNIYSSAGLWNKA 546
Query: 237 FEIFQSMTRDYGIEPQ 252
E+ ++M R G++ +
Sbjct: 547 MEVRKNM-RQMGVKKE 561
>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
Length = 564
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/488 (41%), Positives = 299/488 (61%), Gaps = 33/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+++H VLK G S+ LV Y KC + A ++FDE+ +
Sbjct: 110 EGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITD-------------- 155
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++ V W+ MI G R G + AL LFR+MQ+ V P+EVT+V
Sbjct: 156 ------------------RNLVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMV 197
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+SAC+ GAL+ G+W+H+Y+ K I+ + + AL+NMY++CG I++A +VF+ M +
Sbjct: 198 SVISACAASGALDTGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVK 257
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++S+I GLA++G + +A+E F M ++P VTF+GVL+AC+H GLV G +
Sbjct: 258 DTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYW 317
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM ++GI P +E YGC+VDLL R E+A + M I+P+ ++ +LL CK
Sbjct: 318 SSML-EFGIVPSMELYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKN 376
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
L E +A+RLL+ ++ Y+LLSN YAS +W++ Q+R KMK G++ PGCSSIE
Sbjct: 377 LDKSEVVAQRLLELEPHNAENYILLSNLYASMSQWEKMSQVRKKMKGMGIKAVPGCSSIE 436
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
V+ +HEF++GD HP+ ++ + ++++ + V G+ P VLH++ D EKE AL H
Sbjct: 437 VDGLVHEFVMGDWSHPEAMEVREILRDISKRVHAVGHQPGISDVLHNVVDEEKENALCEH 496
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLAI YGL+ TK IR+VKNLRVC DCH + K+I+ +R+IIVRDR RFH F NG
Sbjct: 497 SERLAIAYGLLKTKTPMAIRIVKNLRVCGDCHEVTKIISAEYRREIIVRDRVRFHKFVNG 556
Query: 481 TCSCGDYW 488
+CSC D+W
Sbjct: 557 SCSCRDFW 564
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 156/291 (53%), Gaps = 5/291 (1%)
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMAR-ALDLFREM-QRDNVRPNEVTIV 120
+G ++ A ++FS+++ + W +MI G ++ ++ + LFR+M +R PN T+
Sbjct: 37 YGDIDYARKLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMA 96
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL ACS + ALE G+ +H+ + K + V AL+N Y++C DI A +VF+E+ +R
Sbjct: 97 FVLKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDR 156
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
++ ++++I+G A G EA+ +FR+M G+ P +VT V V++AC+ G +D G +
Sbjct: 157 NLVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVH 216
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ + IE +E +V++ ++ G E A + M + D S++ I+G
Sbjct: 217 AYINKQL-IETDLELSTALVNMYAKCGCIERAKEVFDAMPVK-DTKAWSSMIVGLAINGL 274
Query: 301 LQLGEQIAKRLLDCR-SADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
+ + R+ + + + T++ + +A A SG E + + M E G+
Sbjct: 275 AEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSMLEFGI 325
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/462 (42%), Positives = 287/462 (62%), Gaps = 2/462 (0%)
Query: 28 YGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAM 87
Y + G +DA +LF+ MPE + V A M+ + + G+V+ A VF ++ +D W+AM
Sbjct: 246 YIQAGHVEDAAELFNAMPE-HPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAM 304
Query: 88 IDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRI 147
I +N + AL FREM VRPN +++ +L+ C+ L L+ GR +H+ M +
Sbjct: 305 IKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSF 364
Query: 148 DLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
D++ ALI MY +CG++DKA +VF + +D+ +NS+I G A HG +A+ +F +
Sbjct: 365 DMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHD 424
Query: 208 MINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
M G+ P +T++G L ACS+ G V G EIF SMT + I P EHY C+VDLL R G
Sbjct: 425 MRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSG 484
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSN 327
EEA+D I NM + PD ++ G+L+ AC++H ++ E AK+LL+ ++G YVLLS+
Sbjct: 485 LVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSH 544
Query: 328 AYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDI-RHPQREQIYKKMQ 386
Y S G+W++A ++R + + K PGCS IE + +H F GD+ HP+ I + ++
Sbjct: 545 IYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILE 604
Query: 387 ELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLR 446
+L ++ GYS VLHDI++ +K +L HSER A+ YGL+ IRV+KNLR
Sbjct: 605 KLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLR 664
Query: 447 VCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
VC DCHS IKLIA IT R+II+RD NRFHHF++G CSC DYW
Sbjct: 665 VCGDCHSAIKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 155/319 (48%), Gaps = 18/319 (5%)
Query: 31 CGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDG 90
G +A +LFDEMP+ DVVA T M++ Y + G + A +F + ++ V WTAMI G
Sbjct: 156 AGRVNEARRLFDEMPD-RDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISG 214
Query: 91 LVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLN 150
+NGE+ A LF M NEV+ +L Q G +E + + M +H +
Sbjct: 215 YAQNGEVNLARKLFEVMPER----NEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPV--- 267
Query: 151 HIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
A++ + + G +D A VFE+M ERD T++++I + +EA+ FREM+
Sbjct: 268 -AACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLW 326
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
+G+RP + + +L C+ ++D G E+ +M R + + ++ + + G +
Sbjct: 327 RGVRPNYPSVISILTVCAALAVLDYGREVHAAMLR-CSFDMDVFAVSALITMYIKCGNLD 385
Query: 271 EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR----SADSGTYVLLS 326
+A + D +M S+++ HG LGEQ D R S D TY+
Sbjct: 386 KAKRVFHTFE-PKDIVMWNSMITGYAQHG---LGEQALGIFHDMRLAGMSPDGITYIGAL 441
Query: 327 NAYASSGKWKEAVQIRAKM 345
A + +GK KE +I M
Sbjct: 442 TACSYTGKVKEGREIFNSM 460
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 43/209 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GRE+H +L+ + L+ +Y KCG A ++F E D+V MI Y
Sbjct: 352 GREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTF-EPKDIVMWNSMITGYA 410
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+HGL E +AL +F +M+ + P+ +T +
Sbjct: 411 QHGLGE-------------------------------QALGIFHDMRLAGMSPDGITYIG 439
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGA-----LINMYSRCGDIDKALQVFEE 176
L+ACS G ++ GR I + M + + I GA ++++ R G +++A + +
Sbjct: 440 ALTACSYTGKVKEGREIFNSMTVN----SSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKN 495
Query: 177 MK-ERDVTTYNSLIAGLAMHGRSIEAVEM 204
M E D + +L+ MH R+ E E
Sbjct: 496 MPVEPDAVIWGALMGACRMH-RNAEIAEF 523
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 21/197 (10%)
Query: 156 ALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRP 215
AL+ Y R D AL +F M RD+ +YN+LI+GL++ +++ + + + P
Sbjct: 53 ALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTLP--DAAAALASIPFPP 110
Query: 216 TKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEH--YGCIVDLLSRVGRPEEA- 272
+ V+F +L GL+ +FQ M P+ H Y ++ L GR EA
Sbjct: 111 SVVSFTSLLRGYVRHGLLADAIRLFQQM-------PERNHVSYTVLLGGLLDAGRVNEAR 163
Query: 273 --YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYA 330
+D + + + ML A +I L +++ KR + ++ + + YA
Sbjct: 164 RLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKR-------NVVSWTAMISGYA 216
Query: 331 SSGKWKEAVQIRAKMKE 347
+G+ A ++ M E
Sbjct: 217 QNGEVNLARKLFEVMPE 233
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/485 (40%), Positives = 300/485 (61%), Gaps = 33/485 (6%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
+HG +K+GL L++ Y KCGE + ++FD+M E
Sbjct: 214 VHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAE------------------ 255
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR-DNVRPNEVTIVCVL 123
KD V W +MI +NG A ++F M + + NEVT+ +L
Sbjct: 256 --------------KDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLL 301
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
AC+ GAL +G +H + K N I+ ++I+MY +CG + A F+ MKE++V
Sbjct: 302 LACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVR 361
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
++ ++IAG MHG + EA+++F +MI G++P +TF+ VL ACSH G ++ G+ F +M
Sbjct: 362 SWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAM 421
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQL 303
+ +Y +EP +EHYGC+VDLL R G +EAY+ I +MK+ D ++ GSLL+AC+IH ++L
Sbjct: 422 SHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVEL 481
Query: 304 GEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNN 363
E A+ L ++ G YVLL+N YA +G+WK+ ++R +K+ G+ K PG S +E+
Sbjct: 482 AEISARELFKLDPSNCGYYVLLANIYADAGRWKDVERMRILVKDRGLVKPPGYSLVELKG 541
Query: 364 EIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSER 423
+H F++GD HPQ E+IYK ++EL ++ GY P+ VLHD+++ EKE + +HSE+
Sbjct: 542 RVHVFLVGDKEHPQHEKIYKYLEELSVKLQEAGYVPNMASVLHDVDEEEKEMIVRVHSEK 601
Query: 424 LAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCS 483
LA+ +G++++ P +TI V+KNLRVC DCH++IKLI+ I R+IIVRD RFHHF++G CS
Sbjct: 602 LAVAFGVMNSIPGSTIHVIKNLRVCGDCHTVIKLISKIVSREIIVRDAKRFHHFKDGLCS 661
Query: 484 CGDYW 488
CGDYW
Sbjct: 662 CGDYW 666
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 167/391 (42%), Gaps = 79/391 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G++ H Q L G S+ L+++Y KCG+ +A LFDE+P
Sbjct: 101 GKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPR--------------- 145
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN------ 115
++ V WT++I G V+N + AL +F+E + N
Sbjct: 146 -----------------RNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGT 188
Query: 116 ---EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
V ++ VLSACS++ + +H K +D V L++ Y++CG++ + +
Sbjct: 189 SVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRK 248
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ-GIRPTKVTFVGVLNACSHGG 231
VF++M E+DV ++NS+IA A +G S +A E+F M+ G + +VT +L AC+H G
Sbjct: 249 VFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEG 308
Query: 232 LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK----------- 280
+ +G + + + G + I+D+ + G+ E A + MK
Sbjct: 309 ALRVGMCLHDQVIK-MGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMI 367
Query: 281 -----------------------IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSA 317
+ P++I S+L+AC G L+ G + + +
Sbjct: 368 AGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNV 427
Query: 318 DSGT--YVLLSNAYASSGKWKEAVQIRAKMK 346
+ G Y + + +G KEA + MK
Sbjct: 428 EPGVEHYGCMVDLLGRAGYIKEAYNLIKSMK 458
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 43/268 (16%)
Query: 80 DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIH 139
D W ++I L R G+ +L F M++ +++PN T C + +CS L L G+ H
Sbjct: 46 DVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAH 105
Query: 140 SYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSI 199
+ + V ALI+MYS+CG + A +F+E+ R++ T+ SLI G + +
Sbjct: 106 QQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAH 165
Query: 200 EAVEMFREMINQ---------GIRPTKVTFVGVLNACS-----------HGGLVDLGFEI 239
EA+ +F+E + + G V + VL+ACS HG + +G +
Sbjct: 166 EALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDK 225
Query: 240 FQ----------------SMTR---DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
S++R D E + + ++ + ++ G +A++ M
Sbjct: 226 VMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGML 285
Query: 281 IAP----DHIMLGSLLSACKIHGKLQLG 304
A + + L +LL AC G L++G
Sbjct: 286 KAGGGKYNEVTLSTLLLACAHEGALRVG 313
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 38/211 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H QV+K+G +N ++++Y KCG+ + A FD M E N V + T MI Y
Sbjct: 313 GMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKN-VRSWTAMIAGYG 371
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG F+R ALD+F +M V+PN +T +
Sbjct: 372 MHG--------FAR-----------------------EALDVFYQMIWAGVKPNYITFIS 400
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VL+ACS G LE G RW ++ ++ ++ G ++++ R G I +A + + MK
Sbjct: 401 VLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVR 460
Query: 180 RDVTTYNSLIAGLAMHG----RSIEAVEMFR 206
RD + SL+A +H I A E+F+
Sbjct: 461 RDFVLWGSLLAACRIHKDVELAEISARELFK 491
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/487 (40%), Positives = 296/487 (60%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR IH V K GL + LV++YGKC E +DA LFD+M E
Sbjct: 855 GRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXE--------------- 899
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+D V WT MI G G +L LF +M+ + V P++V +V
Sbjct: 900 -----------------RDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVT 942
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V+ AC++LGA+ R I Y+ + + L+ I+G A+I+M+++CG ++ A ++F+ M+E++
Sbjct: 943 VVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKN 1002
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +++++IA HG+ +A+++F M+ GI P K+T V +L ACSH GLV+ G F
Sbjct: 1003 VISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFS 1062
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M DY + ++HY C+VDLL R GR +EA I +M D + G+ L AC+ H +
Sbjct: 1063 XMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKDV 1122
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
L E+ A LL+ + + G Y+LLSN YA++G+W++ +IR M + ++K PG + IEV
Sbjct: 1123 XLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKIPGWTWIEV 1182
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+N+ H+F +GD HP+ ++IY+ ++ L ++L GY P T VLHD+++ K L HS
Sbjct: 1183 DNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYTHS 1242
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GLI+T +T IR++KNLRVC DCH+ KL++ IT R IIVRD NRFHHF+ G
Sbjct: 1243 EKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGA 1302
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 1303 CSCGDYW 1309
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 167/445 (37%), Positives = 265/445 (59%), Gaps = 32/445 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR IH V K GL + LV++Y KC E +DA L
Sbjct: 179 GRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFL--------------------- 217
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
F +++ +D V WT MI G G+ +L LF +M+ + V P++V +V
Sbjct: 218 -----------FDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVT 266
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V+ AC++LGA+ R I Y+ + + L+ I+G A+I+MY++CG ++ A ++F+ M+E++
Sbjct: 267 VVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKN 326
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +++++IA HG+ +A+++F M++ G+ P K+T +L ACSH GLV+ G F
Sbjct: 327 VISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFS 386
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM DY + ++HY C+VDLL R GR +EA I +M I D + G+ L AC+ H +
Sbjct: 387 SMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDV 446
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
L E+ A LL+ +S + G YVLLSN YA++G+W++ +IR M + ++K PG + IEV
Sbjct: 447 VLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEV 506
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+N+ H+F +GD HP+ ++IY+ ++ L ++L GY P T VLHD+++ K L HS
Sbjct: 507 DNKSHQFSVGDTTHPRSKEIYEMLKSLSNKLELVGYVPDTNFVLHDVDEELKIGILYTHS 566
Query: 422 ERLAICYGLISTKPYTTIRVVKNLR 446
E+LAI +GLI+T +T IR++KNLR
Sbjct: 567 EKLAIAFGLIATPEHTPIRIIKNLR 591
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 166/347 (47%), Gaps = 48/347 (13%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
++V + +I Y + +++A+ +F + V+D+V W+ M+ G + G+ FRE+
Sbjct: 93 NIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELI 152
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
R RP+ T+ V+ AC L L++GR IH + K +DL+H V AL++MY +C +I+
Sbjct: 153 RCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIE 212
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +F++M+ERD+ T+ +I G A G++ E++ +F +M +G+ P KV V V+ AC+
Sbjct: 213 DARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACA 272
Query: 229 HGG--------------------------LVDL---------GFEIFQSMTRDYGIEPQI 253
G ++D+ EIF M E +
Sbjct: 273 KLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRME-----EKNV 327
Query: 254 EHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKR 310
+ ++ G+ +A D M + PD I L SLL AC G ++ G +
Sbjct: 328 ISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSS 387
Query: 311 LLDCRS--ADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
+ + S D Y + + +G+ EA+++ +K ++K+ G
Sbjct: 388 MWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKL---IKSMTIEKDEG 431
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 94/240 (39%), Gaps = 43/240 (17%)
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
R N + L C L + R +H+ H + N +V LI YS +D A
Sbjct: 59 RLNPKFYISALVNCRNLTQV---RQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYG 115
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
+F+ M RD +++ ++ G A G I FRE+I G RP T V+ AC
Sbjct: 116 LFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKN 175
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGC--IVDLLSRVGRPEEAYDFITNMKIAPDHIMLGS 290
+ +G + + +G++ ++H+ C +VD+ + E+A M+
Sbjct: 176 LQMG-RLIHHIVYKFGLD--LDHFVCAALVDMYVKCREIEDARFLFDKMQ---------- 222
Query: 291 LLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
D T+ ++ YA GK E++ + KM+E GV
Sbjct: 223 -------------------------ERDLVTWTVMIGGYAECGKANESLVLFEKMREEGV 257
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 136 RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMH 195
R +H H + N IV L+ YS +D A +F+ M RD +++ ++ G A
Sbjct: 755 RQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 814
Query: 196 GRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEH 255
G + FRE+I G RP T V+ AC + +G + + +G++ ++H
Sbjct: 815 GDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMG-RLIHHIVYKFGLD--LDH 871
Query: 256 YGC--IVDLLSRVGRPEEA---YDFITNMKIAPDHIMLG 289
+ C +VD+ + E+A +D + + +M+G
Sbjct: 872 FVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIG 910
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/492 (40%), Positives = 302/492 (61%), Gaps = 4/492 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEF---KDAMQLFDEMPECNDVVASTVMI 57
E + G++ + G+++N T + ++ +Y K +L E D V +T ++
Sbjct: 290 EAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALM 349
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y A+++F + KD + WT M +NG AL LF+EMQ + RP
Sbjct: 350 SLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSA 409
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T+V VL C+ L AL+ GR IHS++ ++R + +V ALINMY +CG + +A+ VFE+M
Sbjct: 410 TLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKM 469
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
+RD+ +NS++ A HG E +++F +M G++ V+FV VL+A SH G V G+
Sbjct: 470 AKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGY 529
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK-IAPDHIMLGSLLSACK 296
+ F +M +D+ I P E YGC+VDLL R GR +EA D + + PD I+ +LL AC+
Sbjct: 530 QYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACR 589
Query: 297 IHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGC 356
H K + A+++L+ + SG YV+LSN YA++G W ++R M+ GV+KEPG
Sbjct: 590 THNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGR 649
Query: 357 SSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWA 416
SSIE+ N +HEF+ GD HP+R IY ++ L ++ GY P T+++LHD+ED KE
Sbjct: 650 SSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDM 709
Query: 417 LAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHH 476
L HSERLAI +GLIST P T +RV+KNLRVC+DCH+ K I+ + R+I+VRD +RFH+
Sbjct: 710 LFYHSERLAIAFGLISTPPGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHN 769
Query: 477 FENGTCSCGDYW 488
F++G CSC DYW
Sbjct: 770 FKDGRCSCKDYW 781
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 160/318 (50%), Gaps = 15/318 (4%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+DV +N + GL+ +A +F + +D V W +I V+N A+ LF +
Sbjct: 239 SDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRL 298
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
Q+D V+ N++T V +L+ + L +L G+ IH + + D + +V AL+++Y RC
Sbjct: 299 QQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAP 358
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+A ++F +M +DV T+ + A +G EA+++F+EM +G RPT T V VL+ C
Sbjct: 359 GQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTC 418
Query: 228 SHGGLVDLGFEIFQSMTRD-YGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
+H + G +I + + + +E +E ++++ + G+ EA M D +
Sbjct: 419 AHLAALQKGRQIHSHIIENRFRMEMVVE--TALINMYGKCGKMAEAMSVFEKMA-KRDIL 475
Query: 287 MLGSLLSACKIHG----KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQ-I 341
+ S+L A HG LQL Q+ LD AD+ ++V + +A + SG + Q
Sbjct: 476 VWNSMLGAYAQHGYYDETLQLFNQMQ---LDGVKADAVSFVSVLSALSHSGSVTDGYQYF 532
Query: 342 RAKMKEAGVQKEP---GC 356
A +++ + P GC
Sbjct: 533 VAMLQDFSITPTPELYGC 550
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 155/361 (42%), Gaps = 51/361 (14%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H V G N L+++Y +CG +A Q+
Sbjct: 23 GRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV--------------------- 61
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
FE+ R KD WT MI + G+ RAL +F +MQ ++V P +VT V
Sbjct: 62 --------FEILER---KDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVA 110
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+AC+ +L+ G IH + + + + VG ALINMY++CG + A F+ ++ RD
Sbjct: 111 ILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRD 170
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ ++IA H + A ++R M G+ P K+T V NA + G ++
Sbjct: 171 VVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVY- 229
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---------YDFITNMKIAPDHIMLGSLL 292
+ +E + V++ G +A D +T + ++ +
Sbjct: 230 GLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFG 289
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
A ++ G+LQ D A+ T+VL+ N Y S + I +KEAG +
Sbjct: 290 EAVRLFGRLQ---------QDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDR 340
Query: 353 E 353
+
Sbjct: 341 D 341
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 167/346 (48%), Gaps = 44/346 (12%)
Query: 20 TRLKLVELYGKCGE---FKDAMQLFDEMPECN---DVVASTVMINCYVEHGLVENAFEVF 73
T++ V + C KD M++ ++ + DV T +IN Y + G V A++ F
Sbjct: 104 TKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSF 163
Query: 74 SRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALE 133
R++ +D V WTAMI V++ + A A L+R MQ D V PN++T+ V +A L
Sbjct: 164 KRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLS 223
Query: 134 LGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLA 193
G++++ + ++ + V + +NM+ G + A ++FE+M +RDV T+N +I
Sbjct: 224 EGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYV 283
Query: 194 MHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQI 253
+ EAV +F + G++ +TFV +LN ++ S+T +
Sbjct: 284 QNENFGEAVRLFGRLQQDGVKANDITFVLMLN-------------VYTSLT-------SL 323
Query: 254 EHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
I +L+ G YD D ++ +L+S ++G+ + Q K +D
Sbjct: 324 AKGKVIHELVKEAG-----YD--------RDAVVATALMS---LYGRCEAPGQAWKIFVD 367
Query: 314 CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
S D T+ ++ AYA +G KEA+Q+ +M+ G + P +++
Sbjct: 368 MGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEG--RRPTSATL 411
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 126/263 (47%), Gaps = 3/263 (1%)
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
+P+ V +L CS ++ GR +H ++ + N++V G LI MY++CG + +A Q
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
VFE ++ +DV + +I G A+ MF +M + + PTKVT+V +LNAC+
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
+ G EI + + G E + ++++ ++ G A+D ++ D + +++
Sbjct: 121 LKDGMEIHGQILQQ-GFEGDVFVGTALINMYNKCGSVRGAWDSFKRLE-HRDVVSWTAMI 178
Query: 293 SACKIHGKLQLGEQIAKRL-LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
+AC H + L + +R+ LD + T + NAY E + + ++
Sbjct: 179 AACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVME 238
Query: 352 KEPGCSSIEVNNEIHEFILGDIR 374
+ + VN + +LGD R
Sbjct: 239 SDVRVMNSAVNMFGNAGLLGDAR 261
>gi|308080542|ref|NP_001183145.1| uncharacterized protein LOC100501514 [Zea mays]
gi|238009628|gb|ACR35849.1| unknown [Zea mays]
Length = 332
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 178/332 (53%), Positives = 247/332 (74%), Gaps = 3/332 (0%)
Query: 160 MYSRCGDIDKALQVFEEMK---ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPT 216
MY +CG +++A+ VF ++ +RDV +N++I G AMHGRS EA+E F ++ QG+ PT
Sbjct: 1 MYYKCGSLEEAVAVFRDLGGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPT 60
Query: 217 KVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFI 276
+TF+GVLNACSH GLVD G + +M +YGI P++EHYGC+VDLL R GR EEA+D +
Sbjct: 61 DITFIGVLNACSHSGLVDEGRALLAAMEEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLV 120
Query: 277 TNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWK 336
+MK PD M SLL AC++H L LG+++A L+ A+SGTYVLLSN YA++GKW+
Sbjct: 121 RSMKAKPDAAMWASLLGACRLHKNLALGQRVADYLVANGLANSGTYVLLSNMYAAAGKWR 180
Query: 337 EAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEG 396
E ++R+ M+ +GVQKEPGCS++EV + EF+ GD HP+ +IY K++E+ I + G
Sbjct: 181 EVGRVRSMMRASGVQKEPGCSAVEVGRRVVEFVAGDRSHPRSAEIYAKLEEVNSIARARG 240
Query: 397 YSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIK 456
+ P TE+VLHD++D KE ALA+HSE+LA+ +GLIST P T I++VKNLR C DCH+++K
Sbjct: 241 HVPHTELVLHDLDDAAKERALAVHSEKLALAFGLISTPPRTGIKIVKNLRACADCHAVLK 300
Query: 457 LIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
L++ T RKI+ RDRNRFHHF +G+CSCGDYW
Sbjct: 301 LVSEATGRKIVFRDRNRFHHFVDGSCSCGDYW 332
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 60 YVEHGLVENAFEVFSRVKV---KDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
Y + G +E A VF + +D V W AMI+G +G AL+ F +++ + P +
Sbjct: 2 YYKCGSLEEAVAVFRDLGGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPTD 61
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHR---IDLNHIVGGALINMYSRCGDIDKALQV 173
+T + VL+ACS G ++ GR + + M + + H G ++++ R G +++A +
Sbjct: 62 ITFIGVLNACSHSGLVDEGRALLAAMEEEYGIVPKVEHY--GCMVDLLGRAGRVEEAFDL 119
Query: 174 FEEMKER-DVTTYNSLIAGLAMH 195
MK + D + SL+ +H
Sbjct: 120 VRSMKAKPDAAMWASLLGACRLH 142
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/462 (42%), Positives = 287/462 (62%), Gaps = 2/462 (0%)
Query: 28 YGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAM 87
Y + G +DA +LF+ MPE + V A M+ + + G+V+ A VF ++ +D W+AM
Sbjct: 246 YIQAGHVEDAAELFNAMPE-HPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAM 304
Query: 88 IDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRI 147
I +N + AL FREM VRPN +++ +L+ C+ L L+ GR +H+ M +
Sbjct: 305 IKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSF 364
Query: 148 DLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
D++ ALI MY +CG++DKA +VF + +D+ +NS+I G A HG +A+ +F +
Sbjct: 365 DMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHD 424
Query: 208 MINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
M G+ P +T++G L ACS+ G V G EIF SMT + I P EHY C+VDLL R G
Sbjct: 425 MRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSG 484
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSN 327
EEA+D I NM + PD ++ G+L+ AC++H ++ E AK+LL+ ++G YVLLS+
Sbjct: 485 LVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSH 544
Query: 328 AYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDI-RHPQREQIYKKMQ 386
Y S G+W++A ++R + + K PGCS IE + +H F GD+ HP+ I + ++
Sbjct: 545 IYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILE 604
Query: 387 ELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLR 446
+L ++ GYS VLHDI++ +K +L HSER A+ YGL+ IRV+KNLR
Sbjct: 605 KLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLR 664
Query: 447 VCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
VC DCHS IKLIA IT R+II+RD NRFHHF++G CSC DYW
Sbjct: 665 VCGDCHSAIKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 155/319 (48%), Gaps = 18/319 (5%)
Query: 31 CGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDG 90
G +A +LFDEMP+ DVVA T M++ Y + G + A +F + ++ V WTAMI G
Sbjct: 156 AGRVNEARRLFDEMPD-RDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISG 214
Query: 91 LVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLN 150
+NGE+ A LF M NEV+ +L Q G +E + + M +H +
Sbjct: 215 YAQNGEVNLARKLFEVMPER----NEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPV--- 267
Query: 151 HIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
A++ + + G +D A VFE+M ERD T++++I + +EA+ FREM+
Sbjct: 268 -AACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLW 326
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
+G+RP + + +L C+ ++D G E+ +M R + + ++ + + G +
Sbjct: 327 RGVRPNYPSVISILTVCAALAVLDYGREVHAAMLR-CSFDMDVFAVSALITMYIKCGNLD 385
Query: 271 EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR----SADSGTYVLLS 326
+A + D +M S+++ HG LGEQ D R S D TY+
Sbjct: 386 KAKRVFHTFE-PKDIVMWNSMITGYAQHG---LGEQALGIFHDMRLAGMSPDGITYIGAL 441
Query: 327 NAYASSGKWKEAVQIRAKM 345
A + +GK KE +I M
Sbjct: 442 TACSYTGKVKEGREIFNSM 460
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 43/209 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GRE+H +L+ + L+ +Y KCG A ++F E D+V MI Y
Sbjct: 352 GREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTF-EPKDIVMWNSMITGYA 410
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+HGL E +AL +F +M+ + P+ +T +
Sbjct: 411 QHGLGE-------------------------------QALGIFHDMRLAGMSPDGITYIG 439
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGA-----LINMYSRCGDIDKALQVFEE 176
L+ACS G ++ GR I + M + + I GA ++++ R G +++A + +
Sbjct: 440 ALTACSYTGKVKEGREIFNSMTVN----SSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKN 495
Query: 177 MK-ERDVTTYNSLIAGLAMHGRSIEAVEM 204
M E D + +L+ MH R+ E E
Sbjct: 496 MPVEPDAVIWGALMGACRMH-RNAEIAEF 523
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 21/197 (10%)
Query: 156 ALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRP 215
AL+ Y R D AL +F M RD+ +YN+LI+GL++ +++ + + + P
Sbjct: 53 ALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTLP--DAAAALASIPFPP 110
Query: 216 TKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEH--YGCIVDLLSRVGRPEEA- 272
+ V+F +L GL+ +FQ M P+ H Y ++ L GR EA
Sbjct: 111 SVVSFTSLLRGYVRHGLLADAIRLFQQM-------PERNHVSYTVLLGGLLDAGRVNEAR 163
Query: 273 --YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYA 330
+D + + + ML A +I L +++ KR + ++ + + YA
Sbjct: 164 RLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKR-------NVVSWTAMISGYA 216
Query: 331 SSGKWKEAVQIRAKMKE 347
+G+ A ++ M E
Sbjct: 217 QNGEVNLARKLFEVMPE 233
>gi|225424875|ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Vitis vinifera]
Length = 607
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/496 (42%), Positives = 298/496 (60%), Gaps = 42/496 (8%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG +IH Q+LKLG S+ LV Y C A +FD M E
Sbjct: 146 EGEQIHAQILKLGFDSDVYINNSLVHFYATCDRLDFAKGVFDRMSE-------------- 191
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ V W +ID VR GE AL+LF EMQ+ P+ TI
Sbjct: 192 ------------------RSLVSWNVVIDAFVRFGEFDAALNLFGEMQK-FFEPDGYTIQ 232
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHI----VGGALINMYSRCGDIDKALQVFEE 176
+ +AC+ +G+L LG W H ++ K + D + + + +L++MY +CG ++ ALQ+F
Sbjct: 233 SIANACAGMGSLSLGMWAHVFLLK-KFDADRVNDVLLNTSLVDMYCKCGSLELALQLFHR 291
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI-NQGIRPTKVTFVGVLNACSHGGLVDL 235
M +RDVT++NS+I G + HG A+E F M+ + + P +TFVGVL+AC+HGGLV
Sbjct: 292 MPKRDVTSWNSMILGFSTHGEVAAALEYFGCMVRTEKLMPNAITFVGVLSACNHGGLVSE 351
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G F M +Y I+P++EHYGC+VDLL+R G +EA D ++NM + PD ++ SLL AC
Sbjct: 352 GRRYFDVMVTEYKIKPELEHYGCLVDLLARAGLIDEALDVVSNMPMRPDLVIWRSLLDAC 411
Query: 296 -KIHGKLQLGEQIAKRLLDCRSAD-SGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
K + ++L E++A+R+L+ SG YVLLS YAS+ +W + +R M + GV KE
Sbjct: 412 CKQNAGVELSEEMARRVLEAEGGVCSGVYVLLSRVYASASRWNDVGMVRKLMTDKGVVKE 471
Query: 354 PGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSP-STEVVLHDIEDWE 412
PGCSSIE++ HEF GD HPQ E+IY + +++ V+ GYSP S++ + D
Sbjct: 472 PGCSSIEIDGVAHEFFAGDTSHPQTEEIYSALDVIEERVERVGYSPDSSQAPMVDETIDG 531
Query: 413 KEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRN 472
K+++L +HSERLAI +GL+ TKP IR+ KNLRVCN+CH + KLI+ + R+IIVRDR
Sbjct: 532 KQYSLRLHSERLAIAFGLLKTKPGMPIRIFKNLRVCNNCHQVTKLISRVFNREIIVRDRI 591
Query: 473 RFHHFENGTCSCGDYW 488
RFHHF++G CSC DYW
Sbjct: 592 RFHHFKDGACSCMDYW 607
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 88/170 (51%), Gaps = 3/170 (1%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMAR-ALDLF-REMQRDNVRPNEVTIVCVLSAC 126
AF VF +++ ++ W A+I R+ + + A+ L+ R +++ +V ++ T VL AC
Sbjct: 79 AFRVFHQIENPNSFMWNALIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPFVLKAC 138
Query: 127 SQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYN 186
+ L AL G IH+ + K D + + +L++ Y+ C +D A VF+ M ER + ++N
Sbjct: 139 AYLFALSEGEQIHAQILKLGFDSDVYINNSLVHFYATCDRLDFAKGVFDRMSERSLVSWN 198
Query: 187 SLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
+I G A+ +F EM + P T + NAC+ G + LG
Sbjct: 199 VVIDAFVRFGEFDAALNLFGEM-QKFFEPDGYTIQSIANACAGMGSLSLG 247
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/486 (39%), Positives = 287/486 (59%), Gaps = 32/486 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIHG +++ GL + L++LYGKCG +A
Sbjct: 215 GKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARG---------------------- 252
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+F ++ KD V WT MI +G LFR++ VRPNE T
Sbjct: 253 ----------IFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAG 302
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL+AC+ L A ++G+ +H YM + D AL+++YS+CG+ + A +VF +M D
Sbjct: 303 VLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPD 362
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++ SLI G A +G+ A++ F ++ G +P ++TFVGVL+AC+H GLVD+G E F
Sbjct: 363 LVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFH 422
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
S+ +G+ +HY C++DLL+R GR +EA + I NM + PD + SLL C+IHG +
Sbjct: 423 SVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNI 482
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+L E+ AK L + + TY+ LSN YA++G W E ++R M G+ K+PG S IE+
Sbjct: 483 ELAERAAKALFELEPENPATYITLSNIYANAGLWTEETKVRNDMDNRGIVKKPGKSWIEI 542
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
++H F++GD HP+ I++ + EL + +K EGY T VLHD+E+ +KE + HS
Sbjct: 543 KRQVHVFLVGDTSHPKISDIHEYLGELSKKMKEEGYVADTNFVLHDVEEEQKEQNIFYHS 602
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ +G+IST P T I+V KNLR C DCH+ +K I+ I +RKIIVRD NRFH F +G+
Sbjct: 603 EKLAVAFGIISTSPGTPIKVFKNLRTCVDCHNAMKYISKIVQRKIIVRDSNRFHCFVDGS 662
Query: 482 CSCGDY 487
CSC DY
Sbjct: 663 CSCKDY 668
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 167/313 (53%), Gaps = 5/313 (1%)
Query: 23 KLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTV 82
+L+ +Y KCG DA LFDE+P+ D+ + MI+ Y G +E A ++F + +D
Sbjct: 103 RLIHMYAKCGSLVDAQMLFDEIPQ-KDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNF 161
Query: 83 CWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTIVCVLSACSQLGALELGRWIHSY 141
W A+I G V G ALDLFR MQ + + N T+ L+A + + +L G+ IH Y
Sbjct: 162 SWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGY 221
Query: 142 MGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEA 201
+ + ++L+ +V AL+++Y +CG +++A +F++M ++D+ ++ ++I GR E
Sbjct: 222 LIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEG 281
Query: 202 VEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVD 261
+FR+++ G+RP + TF GVLNAC+ +G E+ MTR G +P +V
Sbjct: 282 FSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTR-VGYDPFSFAASALVH 340
Query: 262 LLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRS-ADSG 320
+ S+ G E A M PD + SL+ +G+ + Q + LL + D
Sbjct: 341 VYSKCGNTETARRVFNQMP-RPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEI 399
Query: 321 TYVLLSNAYASSG 333
T+V + +A +G
Sbjct: 400 TFVGVLSACTHAG 412
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 58/96 (60%)
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
+P+ +++AC + LELG+ +H++ ++ LI+MY++CG + A
Sbjct: 60 QPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQM 119
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM 208
+F+E+ ++D+ ++N++I+G A GR +A ++F EM
Sbjct: 120 LFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEM 155
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/434 (44%), Positives = 284/434 (65%), Gaps = 1/434 (0%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+I Y + G +E A ++FS + +D V WTAM+ G + G A++LFR MQ+ ++P+
Sbjct: 290 LITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPD 349
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
++T VL++CS L+ G+ IH + +L+ + AL++MY++CG +D A VF
Sbjct: 350 KMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFN 409
Query: 176 EMKERDVTTYNSLIAGL-AMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
+M ER+V + ++I G A HGR EA+E F +M QGI+P KVTF VL+AC+H GLV+
Sbjct: 410 QMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVE 469
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
G + F+SM DYGI+P +EHY C VDLL R G EEA + I +M P + G+LLSA
Sbjct: 470 EGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSA 529
Query: 295 CKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
C++H ++ GE+ A+ +L D G YV LS+ YA++G++++A ++R M++ V KEP
Sbjct: 530 CRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEP 589
Query: 355 GCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKE 414
G S IEV+ ++H F + D HP+ EQIY ++ +L + +K GY P T VLHD+++ +KE
Sbjct: 590 GQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEMGYVPDTRFVLHDVDEEQKE 649
Query: 415 WALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRF 474
L HSERLAI YGL+ T P IR+VKNLRVC DCH+ K I+ + R+II RD RF
Sbjct: 650 RILFSHSERLAITYGLMKTPPGMPIRIVKNLRVCGDCHTATKFISKVVGREIIARDAQRF 709
Query: 475 HHFENGTCSCGDYW 488
HHF +G CSCGD+W
Sbjct: 710 HHFADGVCSCGDFW 723
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 174/384 (45%), Gaps = 66/384 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GRE+H +LK G++ NR L+ +Y KCG DA +
Sbjct: 65 QGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARR--------------------- 103
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
VF ++ ++ V WTAMI+ V + A + M+ +P++VT V
Sbjct: 104 -----------VFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFV 152
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L+A + L+LG+ +H + + ++L VG +L+ MY++CGDI KA +F+ + E+
Sbjct: 153 SLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEK 212
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+V T+ LIAG A G+ A+E+ M + P K+TF +L C+ ++ G ++
Sbjct: 213 NVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVH 272
Query: 241 QSMTRD-YGIE------------------------PQIEH-----YGCIVDLLSRVGRPE 270
+ + + YG E + H + +V +++G +
Sbjct: 273 RYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHD 332
Query: 271 EAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC-RSADSGTYVLLS 326
EA + M+ I PD + S+L++C LQ G++I ++L+ + D L
Sbjct: 333 EAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALV 392
Query: 327 NAYASSGKWKEAVQIRAKMKEAGV 350
+ YA G +A + +M E V
Sbjct: 393 SMYAKCGSMDDASLVFNQMSERNV 416
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 150/339 (44%), Gaps = 66/339 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H ++++ GL LV +Y KCG+
Sbjct: 167 GQKVHMEIVEAGLELEPRVGTSLVGMYAKCGD---------------------------- 198
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ A +F R+ K+ V WT +I G + G++ AL+L MQ+ V PN++T
Sbjct: 199 ----ISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFAS 254
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L C+ ALE G+ +H Y+ + V +LI MY +CG +++A ++F ++ RD
Sbjct: 255 ILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRD 314
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V T+ +++ G A G EA+ +FR M QGI+P K+TF VL +CS + G I Q
Sbjct: 315 VVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQ 374
Query: 242 SMTR-DYGIEPQIEH------------------------------YGCIVDLLSRVGRPE 270
+ Y ++ ++ I ++ GR
Sbjct: 375 QLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCR 434
Query: 271 EAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQ 306
EA ++ MK I PD + S+LSAC G ++ G +
Sbjct: 435 EALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRK 473
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 141/329 (42%), Gaps = 67/329 (20%)
Query: 91 LVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLN 150
L + G + AL + M R +L C++L +LE GR +H+ + K I N
Sbjct: 22 LCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPN 81
Query: 151 HIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
+ L++MY++CG + A +VF+ +++R++ ++ ++I +++EA + + M
Sbjct: 82 RYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKL 141
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGR-- 268
G +P KVTFV +LNA ++ L+ LG ++ + + G+E + +V + ++ G
Sbjct: 142 AGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIV-EAGLELEPRVGTSLVGMYAKCGDIS 200
Query: 269 ---------PEE--------------------AYDFITNMK---IAPDHIMLGSLLSACK 296
PE+ A + + M+ +AP+ I S+L C
Sbjct: 201 KARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCT 260
Query: 297 IHGKLQLGEQI-------------------------------AKRLL-DCRSADSGTYVL 324
L+ G+++ A++L D D T+
Sbjct: 261 TPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTA 320
Query: 325 LSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
+ YA G EA+ + +M++ G++ +
Sbjct: 321 MVTGYAQLGFHDEAINLFRRMQQQGIKPD 349
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 31/136 (22%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+ IH Q++ G + + LV +Y KCG DA +F++M E N V + ++ C
Sbjct: 368 EGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCC 427
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+HG A E F +M++ ++P++VT
Sbjct: 428 AQHGRCREALEYFD-------------------------------QMKKQGIKPDKVTFT 456
Query: 121 CVLSACSQLGALELGR 136
VLSAC+ +G +E GR
Sbjct: 457 SVLSACTHVGLVEEGR 472
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 7/169 (4%)
Query: 189 IAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYG 248
++ L GR EA+ + MI QG R F G+L C+ ++ G E+ ++ + G
Sbjct: 19 VSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKS-G 77
Query: 249 IEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGE 305
I+P ++ + ++ G +A +D I + I M+ + ++ K + E
Sbjct: 78 IQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYE 137
Query: 306 QIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
+ +L C+ D T+V L NA+ + + ++ ++ EAG++ EP
Sbjct: 138 TM--KLAGCKP-DKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEP 183
>gi|15241448|ref|NP_199236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170229|sp|Q9FFG8.1|PP417_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g44230
gi|9759524|dbj|BAB10990.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|91806984|gb|ABE66219.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332007694|gb|AED95077.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/491 (40%), Positives = 302/491 (61%), Gaps = 5/491 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+ H Q +L ++++Y KC A ++FDEMPE DV++ T +I Y
Sbjct: 168 GRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPE-RDVISWTELIAAYA 226
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G +E A E+F + KD V WTAM+ G +N + AL+ F M++ +R +EVT+
Sbjct: 227 RVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAG 286
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIV-GGALINMYSRCGDIDKALQVFEEMKE 179
+SAC+QLGA + R + +H+V G ALI+MYS+CG++++A+ VF M
Sbjct: 287 YISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNN 346
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSHGGLVDLGFE 238
++V TY+S+I GLA HGR+ EA+ +F M+ Q I+P VTFVG L ACSH GLVD G +
Sbjct: 347 KNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQ 406
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
+F SM + +G++P +HY C+VDLL R GR +EA + I M + P + G+LL AC+IH
Sbjct: 407 VFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIH 466
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS- 357
++ E A+ L + G Y+LLSN YAS+G W +++R +KE G++K P S
Sbjct: 467 NNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSW 526
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
++ N ++H+F G++ HP +I K++EL + + + GY P V +D+ D K L
Sbjct: 527 VVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLIL 586
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
H+E+LA+ + L++T +TI ++KNLR+C DCH ++L + +T + II+RD RFHHF
Sbjct: 587 IQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHF 646
Query: 478 ENGTCSCGDYW 488
+G CSCGD+W
Sbjct: 647 RSGDCSCGDFW 657
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 135/334 (40%), Gaps = 67/334 (20%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
++IHG VL+ GL + KL+ K G V ++ Y
Sbjct: 66 KQIHGHVLRKGLDQSCYILTKLIRTLTKLG----------------------VPMDPY-- 101
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
A V V+ ++ WTA+I G G+ A+ ++ M+++ + P T +
Sbjct: 102 ------ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSAL 155
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L AC + L LGR H+ + R VG +I+MY +C ID A +VF+EM ERDV
Sbjct: 156 LKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDV 215
Query: 183 TTYNSLIA-------------------------------GLAMHGRSIEAVEMFREMINQ 211
++ LIA G A + + EA+E F M
Sbjct: 216 ISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKS 275
Query: 212 GIRPTKVTFVGVLNACSHGG---LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGR 268
GIR +VT G ++AC+ G D +I Q Y + ++D+ S+ G
Sbjct: 276 GIRADEVTVAGYISACAQLGASKYADRAVQIAQK--SGYSPSDHVVIGSALIDMYSKCGN 333
Query: 269 PEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
EEA + +M + S++ HG+ Q
Sbjct: 334 VEEAVNVFMSMN-NKNVFTYSSMILGLATHGRAQ 366
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/491 (40%), Positives = 299/491 (60%), Gaps = 5/491 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLK----LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMI 57
G+++H +LK L N S L L+ LY K + +A ++F MP +++ ++
Sbjct: 308 GKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMP-VRNIITWNAIL 366
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ YV G +E A F + VK+ + T MI GL +NG L LF++M+ D P +
Sbjct: 367 SGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDF 426
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
L+ACS LGALE GR +H+ + + + VG A+I+MY++CG ++ A VF M
Sbjct: 427 AFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTM 486
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
D+ ++NS+IA L HG ++A+E+F +M+ +G+ P ++TF+ VL ACSH GLV+ G
Sbjct: 487 PSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGR 546
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F SM YGI P +HY +VDL R G A I +M P + +LL+ C+I
Sbjct: 547 HYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRI 606
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
HG + LG + A++L + GTYVLLSN YA G+W + ++R M++ V+KEP CS
Sbjct: 607 HGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACS 666
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IEV N++H F++ D HP+ +Y+ +++L +K GY P T+ VLHD+E +KE AL
Sbjct: 667 WIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHAL 726
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
+ HSE+LA+ +G++ P T+RV KN+R+C DCH+ K ++ + +R+IIVRDR RFHHF
Sbjct: 727 STHSEKLAVGFGIMKLPPDATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHF 786
Query: 478 ENGTCSCGDYW 488
+NG CSC DYW
Sbjct: 787 KNGDCSCRDYW 797
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 166/354 (46%), Gaps = 51/354 (14%)
Query: 4 EIHGQVLKLGLRSNRSTRLK-LVELYGK--------CGEFKDAMQLFDEMPECNDVVAST 54
++H V+K G+ S+ L L+ +Y K C A +LFDEMP+ D + T
Sbjct: 169 QMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPK-RDELTWT 227
Query: 55 VMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP 114
MI YV + + A EVF + W AMI G V G AL L R+M+ ++
Sbjct: 228 TMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQF 287
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH----IVGGALINMYSRCGDIDKA 170
+++T ++SAC+ +G+ ++G+ +H+Y+ K+ ++ NH V ALI +Y + +D+A
Sbjct: 288 DDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEA 347
Query: 171 LQVFEEMKERDVTTYNS-------------------------------LIAGLAMHGRSI 199
++F M R++ T+N+ +I+GLA +G
Sbjct: 348 RKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGD 407
Query: 200 EAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI 259
E +++F++M G P F G L ACS G ++ G ++ + G E + +
Sbjct: 408 EGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVH-LGYESSLSVGNAM 466
Query: 260 VDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG----KLQLGEQIAK 309
+ + ++ G E A M + D + S+++A HG ++L +Q+ K
Sbjct: 467 ISMYAKCGVVEAAESVFVTMP-SVDLVSWNSMIAALGQHGHGVKAIELFDQMLK 519
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 128/278 (46%), Gaps = 44/278 (15%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
R +H ++ G + +L+E+Y K A QLF+E+P D +A T +I Y
Sbjct: 32 ARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPN-PDAIARTTLITAYC 90
Query: 62 EHGLVENAFEVF--SRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
G +E E+F + + ++D+V + AMI G NG+ AL+LFR M+RD+ RP++ T
Sbjct: 91 ALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTF 150
Query: 120 VCVLSA----------CSQLG--------------------------ALELGRWIHSYMG 143
VLSA C Q+ A ELG + +
Sbjct: 151 TSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVS 210
Query: 144 KHRI-----DLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRS 198
++ + + +I Y R D++ A +VFE M E +N++I+G G
Sbjct: 211 ARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCF 270
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
EA+ + R+M GI+ +T+ +++AC++ G +G
Sbjct: 271 QEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMG 308
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/491 (40%), Positives = 305/491 (62%), Gaps = 15/491 (3%)
Query: 13 GLRSNRSTRLKLVELYGKCGEF--KDAMQLFDEMPECN-DVVASTVMINCYVEHGLVENA 69
GL +N +T +V + G F K+A+ F + D +++ Y G ++ A
Sbjct: 396 GLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIA 455
Query: 70 FEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ-----------RDNVRPNEVT 118
+F +++ +D V W +I G V + AL + +MQ R +++PN +T
Sbjct: 456 KRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSIT 515
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
++ +L +C+ L AL G+ IH+Y K+ + + VG AL++MY++CG + + +VF+++
Sbjct: 516 LMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 575
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
R+V T+N ++ MHG S +A++M R M+ QG++P +VTF+ V ACSH G+V+ G +
Sbjct: 576 IRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLK 635
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI-MLGSLLSACKI 297
IF +M +DYG+EP +HY C+VDLL R GR +EAY I + D SLL AC+I
Sbjct: 636 IFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRI 695
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
H L++GE A+ L+ + YVLL+N Y+S+G W +A ++R MK GV+KEPGCS
Sbjct: 696 HNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCS 755
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IE +E+H+F+ GD HPQ E++ ++ L + ++ EGY P T VLH++E+ EKE L
Sbjct: 756 WIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWERMRKEGYIPDTSCVLHNVEEDEKEILL 815
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LAI +G+++T P T IRV KNLRVCNDCH K I+ + R+II+RD RFHHF
Sbjct: 816 CGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKVVDREIILRDVRRFHHF 875
Query: 478 ENGTCSCGDYW 488
+NGTCSCGDYW
Sbjct: 876 KNGTCSCGDYW 886
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 116/242 (47%), Gaps = 37/242 (15%)
Query: 2 GREIHGQVLKLGLRSNRSTRLK-LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
G++IH V K G + T LV LY KCG+F
Sbjct: 112 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDF-------------------------- 145
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G V ++VF R+ ++ V W ++I L + AL+ FR M ++V P+ T+V
Sbjct: 146 ---GAV---YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLV 199
Query: 121 CVLSACSQLGALE---LGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
V ACS E +G+ +H+Y G + +LN + L+ MY + G + + +
Sbjct: 200 SVALACSNFPMPEGLLMGKQVHAY-GLRKGELNSFIINTLVAMYGKMGKLASSKVLLGSF 258
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
+ RD+ T+N++++ L + + +EA+E REM+ +G+ P T VL ACSH ++ G
Sbjct: 259 EGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGK 318
Query: 238 EI 239
E+
Sbjct: 319 EL 320
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 46 ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
E N + +T ++ Y + G + ++ + + +D V W ++ L +N + AL+ R
Sbjct: 229 ELNSFIINT-LVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLR 287
Query: 106 EMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKH-RIDLNHIVGGALINMYSRC 164
EM + V P+ TI VL ACS L L G+ +H+Y K+ +D N VG AL++MY C
Sbjct: 288 EMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNC 347
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM-INQGIRPTKVTFVGV 223
+ +VF+ M +R + +N++I G A + EA+ +F EM + G+ T GV
Sbjct: 348 KQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGV 407
Query: 224 LNACSHGGLVDL-----GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGR 268
+ AC G GF + + + RD ++ ++D+ SR+G+
Sbjct: 408 VPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQ------NALMDMYSRLGK 451
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 128/276 (46%), Gaps = 36/276 (13%)
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W ++ VR+ + A+ + +M ++P+ +L A + L ++LG+ IH+++
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120
Query: 144 KHRIDLNHI-VGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAV 202
K ++ + V L+N+Y +CGD +VF+ + ER+ ++NSLI+ L + A+
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180
Query: 203 EMFREMINQGIRPTKVTFVGVLNACSH----GGLV-------------DLGFEIFQSMTR 245
E FR M+++ + P+ T V V ACS+ GL+ +L I ++
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSFIINTLVA 240
Query: 246 DYGIEPQIEHYGCIV------------DLLSRVGRPE---EAYDFITNM---KIAPDHIM 287
YG ++ ++ +LS + + E EA +++ M + PD
Sbjct: 241 MYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFT 300
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV 323
+ S+L AC L+ G+++ L S D ++V
Sbjct: 301 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFV 336
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 109/247 (44%), Gaps = 38/247 (15%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+EIH +K L ++ + LV++Y KCG + + ++FD++P
Sbjct: 531 KGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP--------------- 575
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+++ + W ++ +G A+D+ R M V+PNEVT +
Sbjct: 576 -----------------IRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFI 618
Query: 121 CVLSACSQLGALELGRWIHSYMGK-HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V +ACS G + G I M K + ++ + ++++ R G + +A Q+ +
Sbjct: 619 SVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPR 678
Query: 180 R--DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVT-FVGVLNACSHGGLVDLG 236
++SL+ +H ++E E+ + + Q + P + +V + N S GL
Sbjct: 679 NFDKAGAWSSLLGACRIHN-NLEIGEIAAQNLIQ-LEPNVASHYVLLANIYSSAGLWYKA 736
Query: 237 FEIFQSM 243
E+ ++M
Sbjct: 737 TEVRRNM 743
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/488 (39%), Positives = 298/488 (61%), Gaps = 33/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG++IH V++ GL S+ L+++Y KC
Sbjct: 120 EGKKIHKDVIRSGLESDVFVGAALIDMYAKC----------------------------- 150
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G VE+A +VF ++ +D VCW +M+ +NG+ +L L R M + ++P E T V
Sbjct: 151 ---GCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFV 207
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
++A + G L G+ +H Y +H + N V AL++MY++ G ++ A +FE ++E+
Sbjct: 208 ISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEK 267
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
V ++N++I G AMHG + EA+++F+EM + + P +TFVGVL ACSHGGL++ G F
Sbjct: 268 RVVSWNAMITGYAMHGHANEALDLFKEMKGK-VLPDHITFVGVLAACSHGGLLNEGKMHF 326
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+SM D+ I P ++HY C++DLL GR EEAY I M++ PD + G+LL +CKIHG
Sbjct: 327 RSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGN 386
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+++GE ++L++ D G YV+LSN YA +GKW ++R M G++K CS IE
Sbjct: 387 VEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWDGVARLRDLMMNKGLKKSIACSWIE 446
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
V N++H F+ D HP+ E IY +++ +++K GY+P V HD+ED EK ++ H
Sbjct: 447 VGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKEAGYAPQVGSVFHDVEDDEKVDMVSCH 506
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLAI +GLIST T + ++KNLR+C DCH IK I+ IT+R+I +RD NR+HHF++G
Sbjct: 507 SERLAIAFGLISTSAGTKLLIIKNLRICEDCHVAIKFISKITEREITIRDVNRYHHFKDG 566
Query: 481 TCSCGDYW 488
CSCGD+W
Sbjct: 567 VCSCGDFW 574
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 153/337 (45%), Gaps = 66/337 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H ++ ++G+ N KLV LY C +A LFD
Sbjct: 20 GKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFD------------------- 60
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
R+ ++ W MI G NG A+ L+ +M+ + P++ T
Sbjct: 61 -------------RISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPF 107
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL ACS L A+E G+ IH + + ++ + VG ALI+MY++CG ++ A QVF+++ ERD
Sbjct: 108 VLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERD 167
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +NS++A + +G+ E++ + R M G++PT+ TFV + A + GL+ G E+
Sbjct: 168 VVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHG 227
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRV-------------------------------GRPE 270
R +G E + ++D+ ++ G
Sbjct: 228 YSWR-HGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHAN 286
Query: 271 EAYDFITNM--KIAPDHIMLGSLLSACKIHGKLQLGE 305
EA D M K+ PDHI +L+AC G L G+
Sbjct: 287 EALDLFKEMKGKVLPDHITFVGVLAACSHGGLLNEGK 323
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 118/262 (45%), Gaps = 18/262 (6%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L +C A+E G+ +H+ + + I N ++ L+N+Y C + A +F+ + +R+
Sbjct: 7 LLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRN 66
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ +N +I G A +G A+ ++ +M + G+ P K TF VL ACS ++ G +I +
Sbjct: 67 LFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHK 126
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIH 298
+ R G+E + ++D+ ++ G E A +D I + + ML + +
Sbjct: 127 DVIRS-GLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPD 185
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSG-----------KWKEAVQIRAKMKE 347
L L +A + GT+V+ A A +G W+ + K+K
Sbjct: 186 ESLALCRVMA---FNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKT 242
Query: 348 AGVQKEPGCSSIEVNNEIHEFI 369
A + S+ V + E +
Sbjct: 243 ALMDMYAKSGSVNVARSLFELL 264
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/489 (39%), Positives = 305/489 (62%), Gaps = 5/489 (1%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPE----CNDVVASTVMINCY 60
++ ++ +G+ + T + L + + G F + + + +D+ +I+ Y
Sbjct: 328 VYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMY 387
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR-DNVRPNEVTI 119
+ G +++A +VF + VKD + W ++I G +NG A+D++ M+ PN+ T
Sbjct: 388 AKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTW 447
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V +L+A SQLGAL+ G H + K+ + + V L++MY +CG + AL +F E+
Sbjct: 448 VSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPH 507
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+ ++N++I+ +HG ++AV++F+EM ++G++P +TFV +L+ACSH GLVD G
Sbjct: 508 QSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWC 567
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
FQ M YGI P ++HYGC+VDL R G E+A++F+ NM + PD + G+LL AC+IH
Sbjct: 568 FQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHE 627
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
++L ++ LL S + G YVLLSN YA G W+ ++R+ ++ G++K PG SSI
Sbjct: 628 NVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSI 687
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
EV+ +I F G+ HP+ E+IY +++ L +K GY P VL D+ED EKE L
Sbjct: 688 EVDKKIDVFYTGNQTHPKCEEIYSELRNLTAKMKSIGYVPDYNFVLQDVEDDEKENILTS 747
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSERLA+ +G+IST P TT+++ KNLRVC DCH+ K I+ IT+R+IIVRD NRFHHF++
Sbjct: 748 HSERLAMAFGIISTPPKTTLQIFKNLRVCGDCHNATKFISKITEREIIVRDSNRFHHFKD 807
Query: 480 GTCSCGDYW 488
G CSCGDYW
Sbjct: 808 GVCSCGDYW 816
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 158/347 (45%), Gaps = 35/347 (10%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR++H VLKLG EC DV + I+ Y
Sbjct: 157 DGRKVHCLVLKLGF-------------------------------EC-DVYIAASFIHFY 184
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G V A +F + ++D W AMI G NG++A AL++F EM+ +V + VTI
Sbjct: 185 SRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTIS 244
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L C QL + G IH Y K ++ + V ALINMY++ G++ A +F +MK R
Sbjct: 245 SLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVR 304
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D+ ++NSL+A + + + A+ ++ +M + G+ P +T V + + + G I
Sbjct: 305 DIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIH 364
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+TR I I+D+ +++G + A + + D I SL++ +G
Sbjct: 365 GFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPV-KDVISWNSLITGYSQNGL 423
Query: 301 LQLGEQI--AKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
+ + R + GT+V + A++ G K+ ++ ++
Sbjct: 424 ANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQL 470
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 117/246 (47%), Gaps = 6/246 (2%)
Query: 50 VVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE-MQ 108
+ S +IN Y G + +A F +++ KD W +MI R G A+D F E +
Sbjct: 75 IFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLS 134
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
++ + T V+ AC G L+ GR +H + K + + + + I+ YSR G +
Sbjct: 135 TSFLQSDHYTFPPVIRAC---GNLDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVS 191
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +F+ M RD+ T+N++I+G ++G+ EA+E+F EM + + VT +L C
Sbjct: 192 LACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICV 251
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
+ G I + G+E + ++++ ++ G A MK+ D +
Sbjct: 252 QLDDIISGVLIHVYAIK-LGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVR-DIVSW 309
Query: 289 GSLLSA 294
SLL+A
Sbjct: 310 NSLLAA 315
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 102/212 (48%), Gaps = 42/212 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G + HGQ++K L + LV++YGKCG+ DA+ LF E+P
Sbjct: 462 QGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPH-------------- 507
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ +V W A+I +G +A+ LF+EMQ + V+P+ +T V
Sbjct: 508 ------------------QSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFV 549
Query: 121 CVLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+LSACS G ++ G+W M + R L H G +++++ R G ++KA + M
Sbjct: 550 SLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHY--GCMVDLFGRAGHLEKAFNFVKNM 607
Query: 178 KER-DVTTYNSLIAGLAMHGRSIEAVEMFREM 208
R DV+ + +L+ +H E VE+ R +
Sbjct: 608 PVRPDVSVWGALLGACRIH----ENVELVRTV 635
>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 472
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/437 (43%), Positives = 285/437 (65%), Gaps = 2/437 (0%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
T +++ YV+ G VE A +VFS + KD V W+AM+ G + GE A+ +F E+ + ++
Sbjct: 36 TALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIK 95
Query: 114 PNEVTIVCVLSACSQLGA-LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
PNE T +L+ C+ A + G+ H + K R+D + V AL+ MY++ G+I+ A +
Sbjct: 96 PNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEE 155
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
VF+ +E+D+ ++NS+I+G A HG++++A+++F+EM + ++ VTF+GV AC+H GL
Sbjct: 156 VFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGL 215
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
V+ G + F M RD I P EH C+VDL SR G+ E+A I NM + ++L
Sbjct: 216 VEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTIL 275
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
+AC++H K +LG A++++ + DS YVLLSN YA SG W+E ++R M E V+K
Sbjct: 276 AACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKK 335
Query: 353 EPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE 412
EPG S IEV N+ + F+ GD HP ++QIY K+++L +K GY P T VL DI+D
Sbjct: 336 EPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEH 395
Query: 413 KEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRN 472
KE LA HSERLAI +GLI+T + + ++KNLRVC DCH +IKLIA I +R+I+VRD N
Sbjct: 396 KEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSN 455
Query: 473 RFHHF-ENGTCSCGDYW 488
RFHHF +G CSCGD+W
Sbjct: 456 RFHHFSSDGVCSCGDFW 472
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 86/148 (58%), Gaps = 2/148 (1%)
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
S+ ++ Y + G +E+A EVF R + KD V W +MI G ++G+ +ALD+F+EM++ V
Sbjct: 137 SSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKV 196
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKH-RIDLNHIVGGALINMYSRCGDIDKAL 171
+ + VT + V +AC+ G +E G M + +I ++++YSR G ++KA+
Sbjct: 197 KMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAM 256
Query: 172 QVFEEMKERDVTT-YNSLIAGLAMHGRS 198
+V E M +T + +++A +H ++
Sbjct: 257 KVIENMPNPAGSTIWRTILAACRVHKKT 284
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 123/266 (46%), Gaps = 40/266 (15%)
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
E T +L+A + E +H+ + K + + VG AL++ Y + G +++A +VF
Sbjct: 1 EFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFS 56
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS------- 228
+ ++D+ +++++AG A G + A++MF E+ GI+P + TF +LN C+
Sbjct: 57 GIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMG 116
Query: 229 -----HGGLV----DLGFEIFQSMTRDYGIEPQIE---------------HYGCIVDLLS 264
HG + D + ++ Y + IE + ++ +
Sbjct: 117 QGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYA 176
Query: 265 RVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL-DCRSADSG 320
+ G+ +A D M K+ D + + +AC G ++ GE+ ++ DC+ A +
Sbjct: 177 QHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTK 236
Query: 321 TY-VLLSNAYASSGKWKEAVQIRAKM 345
+ + + Y+ +G+ ++A+++ M
Sbjct: 237 EHNSCMVDLYSRAGQLEKAMKVIENM 262
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/493 (40%), Positives = 306/493 (62%), Gaps = 7/493 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
R I+ +++ +R + LV +Y G A + F +M ++ ST M++ Y
Sbjct: 231 NRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKM-SVRNLFVSTAMVSGYS 289
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G +++A +F + + KD VCWT MI V + AL +F EM ++P+ V++
Sbjct: 290 KCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFS 349
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V+SAC+ LG L+ +W+HS + + ++ + ALINMY++CG +D VFE+M R+
Sbjct: 350 VISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRN 409
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +++S+I L+MHG + +A+ +F M + + P +VTFVGVL CSH GLV+ G +IF
Sbjct: 410 VVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFA 469
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SMT +Y I P++EHYGC+VDL R EA + I +M +A + ++ GSL+SAC+IHG+L
Sbjct: 470 SMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGEL 529
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LG+ AKR+L+ G VL+SN YA +W++ IR M+E V KE G S I+
Sbjct: 530 ELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQ 589
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N + HEF++GD RH Q +IY K+ E+ +KL GY P VL D+E+ EK+ + HS
Sbjct: 590 NGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHS 649
Query: 422 ERLAICYGLISTKPYT------TIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
E+LA+C+GL++ + IR+VKNLRVC DCH KL++ + +R+IIVRDR RFH
Sbjct: 650 EKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFH 709
Query: 476 HFENGTCSCGDYW 488
++NG CSC DYW
Sbjct: 710 CYKNGLCSCRDYW 722
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 164/352 (46%), Gaps = 12/352 (3%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG E+HG K+ + +++Y CG A +FDEM DVV MI Y
Sbjct: 129 EGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSH-RDVVTWNTMIERY 187
Query: 61 VEHGLVENAFEVFSRVK----VKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
GLV+ AF++F +K + D + ++ R G M ++ + ++VR +
Sbjct: 188 CRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDT 247
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
+ +++ + G +++ R M N V A+++ YS+CG +D A +F++
Sbjct: 248 HLLTALVTMYAGAGCMDMAREFFRKMSVR----NLFVSTAMVSGYSKCGRLDDAQVIFDQ 303
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
+++D+ + ++I+ EA+ +F EM GI+P V+ V++AC++ G++D
Sbjct: 304 TEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA 363
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
+ S G+E ++ ++++ ++ G + D M + + S+++A
Sbjct: 364 -KWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALS 421
Query: 297 IHGKLQLGEQIAKRL-LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+HG+ + R+ + + T+V + + SG +E +I A M +
Sbjct: 422 MHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTD 473
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 134/290 (46%), Gaps = 14/290 (4%)
Query: 69 AFEVFSRV-KVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACS 127
A VFS + +++ + + L R+ E + ++ ++ R ++ + + +L A S
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 128 QLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNS 187
++ AL G +H K + V ++MY+ CG I+ A VF+EM RDV T+N+
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 188 LIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDY 247
+I G EA ++F EM + + P ++ +++AC G + I++ + +
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN- 241
Query: 248 GIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ----L 303
+ +V + + G + A +F M + + + +++S G+L +
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVR-NLFVSTAMVSGYSKCGRLDDAQVI 300
Query: 304 GEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
+Q K+ L C + + +AY S +EA+++ +M +G++ +
Sbjct: 301 FDQTEKKDLVC-------WTTMISAYVESDYPQEALRVFEEMCCSGIKPD 343
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/487 (40%), Positives = 291/487 (59%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++ +KLG S L+ +Y + G DA + FD + E
Sbjct: 395 GEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFE--------------- 439
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K+ + + +ID +N AL+LF E++ + + T
Sbjct: 440 -----------------KNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFAS 482
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+LS + +G + G IH+ + K + LN V ALI+MYSRCG+I+ A QVFE+M++R+
Sbjct: 483 LLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRN 542
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ S+I G A HG + +A+E+F +M+ +G+RP VT++ VL+ACSH GLV+ G++ F+
Sbjct: 543 VISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFK 602
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM ++G+ P++EHY C+VD+L R G EA FI +M D ++ + L AC++HG L
Sbjct: 603 SMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNL 662
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LG+ AK +++ D Y+LLSN YAS+ KW E IR MKE + KE GCS +EV
Sbjct: 663 ELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEV 722
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N++H+F +GD HP+ +IY ++Q L +K GY P+ + VLHD+E+ +KE L HS
Sbjct: 723 ENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHS 782
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E++A+ +GLIST IRV KNLR+C DCHS IK I+ T R+IIVRD NRFHH ++G
Sbjct: 783 EKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRDANRFHHIKDGR 842
Query: 482 CSCGDYW 488
CSC +YW
Sbjct: 843 CSCNEYW 849
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 160/343 (46%), Gaps = 41/343 (11%)
Query: 48 NDVVASTVMINCYVE-HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
+DV +I+ +V+ G + +AF+VF ++ ++ V WT MI L++ G A+DLF E
Sbjct: 202 SDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLE 261
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC-- 164
M P+ T+ V+SAC+ + L LG+ +HS +H + L+ VG LINMY++C
Sbjct: 262 MILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSV 321
Query: 165 -GDIDKALQVFEEMKERDVTTYNSLIAGLAMH-GRSIEAVEMFREMINQGIRPTKVTFVG 222
G + A ++F+++ + +V ++ ++I G G EA+++FR MI + P TF
Sbjct: 322 DGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSS 381
Query: 223 VLNACSHGGLVDLGFEIFQSMTR------------------------------DYGIEPQ 252
L AC++ + +G ++F + D E
Sbjct: 382 TLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKN 441
Query: 253 IEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAK 309
+ Y ++D ++ EEA ++ I + + SLLS G + GEQI
Sbjct: 442 LISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHA 501
Query: 310 RLLDC--RSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
R++ + S L+S Y+ G + A Q+ M++ V
Sbjct: 502 RVIKSGLKLNQSVCNALIS-MYSRCGNIESAFQVFEDMEDRNV 543
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 137/283 (48%), Gaps = 37/283 (13%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKC---GEFKDAMQLFDEMPECNDVVASTVMIN 58
G+++H Q ++ GL +R L+ +Y KC G A ++FD++ + N
Sbjct: 290 GQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHN---------- 339
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEM-ARALDLFREMQRDNVRPNEV 117
VFS WTAMI G V+ G ALDLFR M +V PN
Sbjct: 340 -------------VFS---------WTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHF 377
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T L AC+ L AL +G + ++ K + V +LI+MY+R G ID A + F+ +
Sbjct: 378 TFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDIL 437
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
E+++ +YN++I A + S EA+E+F E+ +QG+ + TF +L+ + G + G
Sbjct: 438 FEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGE 497
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
+I + + G++ ++ + SR G E A+ +M+
Sbjct: 498 QIHARVIKS-GLKLNQSVCNALISMYSRCGNIESAFQVFEDME 539
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 156/379 (41%), Gaps = 75/379 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H ++ + L+ + T L+ LY KCG+++ A +F M D+++
Sbjct: 85 GTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLIS--------- 135
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
W+AM+ N RAL F +M + PNE
Sbjct: 136 ----------------------WSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAA 173
Query: 122 VLSACSQLGALELGRWIHSYMGKH-RIDLNHIVGGALINMYSRC-GDIDKALQVFEEMKE 179
ACS + +G I ++ K + + VG LI+M+ + GD+ A +VFE+M E
Sbjct: 174 ATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPE 233
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
R+ T+ +I L G + EA+++F EMI G P + T GV++AC++ L+ LG ++
Sbjct: 234 RNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQL 293
Query: 240 FQSMTRDYGIEPQ-------IEHYG-CIVD---------------------------LLS 264
R +G+ I Y C VD +
Sbjct: 294 HSQAIR-HGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQ 352
Query: 265 RVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL--LDCRSADS 319
+ G EEA D M + P+H S L AC L++GEQ+ L S +
Sbjct: 353 KGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNC 412
Query: 320 GTYVLLSNAYASSGKWKEA 338
L+S YA SG+ +A
Sbjct: 413 VANSLIS-MYARSGRIDDA 430
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 36/199 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G +IH +V+K GL+ N+S L+ +Y +CG + A Q+F++M + N V++ T +I +
Sbjct: 495 KGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRN-VISWTSIITGF 553
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+HG +AL+LF +M + VRPN VT +
Sbjct: 554 AKHGFA-------------------------------TQALELFHKMLEEGVRPNLVTYI 582
Query: 121 CVLSACSQLGALELGRWIH--SYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
VLSACS +G + G W H S +H + ++++ R G + +A+Q M
Sbjct: 583 AVLSACSHVGLVNEG-WKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMP 641
Query: 179 ER-DVTTYNSLIAGLAMHG 196
+ D + + + +HG
Sbjct: 642 YKADALVWRTFLGACRVHG 660
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 107/253 (42%), Gaps = 38/253 (15%)
Query: 92 VRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH 151
+ NG + +A+ M P+ T L C + + ++G +H + + + L+
Sbjct: 42 INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101
Query: 152 IVGGALINMYSRCGDIDKALQVFEEM-KERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
+ +LI++YS+CG +KA +F+ M RD+ +++++++ A + A+ F +MI
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGC-IVDL------- 262
G P + F ACS V +G IF + + ++ + GC ++D+
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDV-CVGCGLIDMFVKGRGD 220
Query: 263 -------------------------LSRVGRPEEAYDFITNMKIA---PDHIMLGSLLSA 294
L + G EA D M ++ PD L ++SA
Sbjct: 221 LVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISA 280
Query: 295 CKIHGKLQLGEQI 307
C L LG+Q+
Sbjct: 281 CANMELLLLGQQL 293
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/457 (43%), Positives = 277/457 (60%), Gaps = 1/457 (0%)
Query: 33 EFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLV 92
+ A + F PE D V T M++ Y++ G V A E F + V++ V W A++ G V
Sbjct: 206 DMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYV 265
Query: 93 RNGEMARALDLFREMQRD-NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH 151
+N AL LFR M R+ NV+PN T+ VL CS L AL G+ IH + K + N
Sbjct: 266 KNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNL 325
Query: 152 IVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ 211
VG +L++MY +CGD+ A ++F EM RDV +N++I+G A HG EA+ +F M ++
Sbjct: 326 TVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDE 385
Query: 212 GIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEE 271
G+ P +TFV VL AC H GL D G F+ M YGIEP+++HY C+VDLL R G+ E
Sbjct: 386 GVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLER 445
Query: 272 AYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYAS 331
A D I +M P G+LL+AC+++ L+ E A +L++ +G YV L+N YA
Sbjct: 446 AVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAG 505
Query: 332 SGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQI 391
+ +W + ++R MK+ V K PG S IE+ +HEF D HPQ I++K+ +L +
Sbjct: 506 ANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAER 565
Query: 392 VKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDC 451
+K GY P + VLHD+++ K L HSE+LAI +GLIST P T+R+ KNLRVC DC
Sbjct: 566 MKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLRVCGDC 625
Query: 452 HSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
H+ K+I+ I R+II+RD RFHHF G CSCGDYW
Sbjct: 626 HNAAKVISKIEDREIILRDTTRFHHFRGGHCSCGDYW 662
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 151/325 (46%), Gaps = 51/325 (15%)
Query: 32 GEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGL 91
G DA LFD +P D V+ +++C+ G + A +F+ + V+D V W M+ GL
Sbjct: 112 GRLADARHLFDRIPT-PDAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGL 170
Query: 92 VRNGEMARALDLFREMQRDNVRPNEVTIVCVLS--ACSQ-LGALELGRWIHSYMGKHRID 148
++G + A +F M VR N V+ ++S ACS+ + A E W + K
Sbjct: 171 SKSGAVEEAKAVFLAMP---VR-NSVSWNAMVSGFACSRDMSAAE--EWFRNAPEKG--- 221
Query: 149 LNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM 208
+ ++ A+++ Y G++ KA++ FE M R++ ++N+++AG + + +A+ +FR M
Sbjct: 222 -DAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTM 280
Query: 209 INQG-IRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
+ + ++P T VL CS+ + G +I H C+ LSR
Sbjct: 281 VREANVQPNASTLSSVLLGCSNLSALGFGKQI---------------HQWCMKLPLSR-- 323
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSN 327
+ + + G L SACK+ G++ + +A + + +
Sbjct: 324 ------NLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVA-------------WNAMIS 364
Query: 328 AYASSGKWKEAVQIRAKMKEAGVQK 352
YA G KEA+ + +MK+ GV+
Sbjct: 365 GYAQHGDGKEAINLFERMKDEGVEP 389
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 43/209 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G++IH +KL L N + LV +Y KCG+ A +LF EM DVVA MI+ Y
Sbjct: 309 GKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEM-HTRDVVAWNAMISGYA 367
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+HG DG A++LF M+ + V PN +T V
Sbjct: 368 QHG------------------------DG-------KEAINLFERMKDEGVEPNWITFVA 396
Query: 122 VLSACSQLGALELGRWIHSYMGKHRI-----DLNHIVGGALINMYSRCGDIDKALQVFEE 176
VL+AC G + G I + G + ++H ++++ R G +++A+ +
Sbjct: 397 VLTACIHTGLCDFG--IRCFEGMQELYGIEPRVDHY--SCMVDLLCRAGKLERAVDLIRS 452
Query: 177 MK-ERDVTTYNSLIAGLAMHGRSIEAVEM 204
M E + Y +L+A ++ +++E E+
Sbjct: 453 MPFEPHPSAYGTLLAACRVY-KNLEFAEL 480
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/486 (41%), Positives = 301/486 (61%), Gaps = 31/486 (6%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
IH V+K G S L++ Y K GE
Sbjct: 204 SIHSFVIKRGFDRGVSVGNTLLDAYAKGGE------------------------------ 233
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP-NEVTIVCV 122
G V A ++F ++ KD V + +++ ++G A D+FR + ++ V N +T+ V
Sbjct: 234 GGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTV 293
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L A S GAL +G+ IH + + ++ + IVG ++I+MY +CG ++ A F+ MK ++V
Sbjct: 294 LLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNV 353
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
++ ++IAG MHG + +A+E+F MI+ G+RP +TFV VL ACSH GL D+G+ F +
Sbjct: 354 RSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNA 413
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
M +G+EP +EHYGC+VDLL R G ++AYD I MK+ PD I+ SLL+AC+IH ++
Sbjct: 414 MKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVE 473
Query: 303 LGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVN 362
L E RL + ++ G Y+LLS+ YA SG+WK+ ++R MK G+ K PG S +E+N
Sbjct: 474 LAEISVARLFELDPSNCGYYMLLSHIYADSGRWKDVERVRMTMKNRGLVKPPGFSLLELN 533
Query: 363 NEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSE 422
E+H F++GD HPQRE+IY+ + EL + + GY +T V HD+++ EKE L +HSE
Sbjct: 534 GEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSE 593
Query: 423 RLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTC 482
+LAI +G+++T P +T+ VVKNLRVC+DCH++IKLI+ I R+ +VRD RFHHF++G C
Sbjct: 594 KLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGFC 653
Query: 483 SCGDYW 488
SCGDYW
Sbjct: 654 SCGDYW 659
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 140/289 (48%), Gaps = 42/289 (14%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
G++ H Q G +S+ L+ +Y CG+ +DA ++FDE+P+
Sbjct: 94 SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPK-------------- 139
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM---QRDN---VRP 114
++ V WT+MI G NG A+ LF+++ + D+ +
Sbjct: 140 ------------------RNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFL 181
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD--IDKALQ 172
+ + +V V+SACS++ A L IHS++ K D VG L++ Y++ G+ + A +
Sbjct: 182 DSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARK 241
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTK-VTFVGVLNACSHGG 231
+F+++ ++D +YNS+++ A G S EA ++FR +I + + +T VL A SH G
Sbjct: 242 IFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSG 301
Query: 232 LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
+ +G I + R G+E + I+D+ + GR E A MK
Sbjct: 302 ALRIGKCIHDQVIR-MGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMK 349
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 154/333 (46%), Gaps = 52/333 (15%)
Query: 67 ENAFEVFSR-VKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
+N +F+R V D W ++I L R+G+ A AL F M++ ++ P + C + A
Sbjct: 26 QNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKA 85
Query: 126 CSQLGALELGRWIH--SYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
CS L + G+ H +++ ++ D+ V ALI MYS CG ++ A +VF+E+ +R++
Sbjct: 86 CSSLLDIFSGKQTHQQAFVFGYQSDI--FVSSALIVMYSTCGKLEDARKVFDEIPKRNIV 143
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTF------VGVLNACS--------- 228
++ S+I G ++G +++AV +F++++ + F V V++ACS
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTE 203
Query: 229 --HGGLVDLGFE----IFQSMTRDYG-----------------IEPQIEHYGCIVDLLSR 265
H ++ GF+ + ++ Y ++ Y I+ + ++
Sbjct: 204 SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263
Query: 266 VGRPEEAYD----FITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADS-- 319
G EA+D I + + I L ++L A G L++G+ I +++ D
Sbjct: 264 SGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI 323
Query: 320 -GTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
GT ++ + Y G+ + A +MK V+
Sbjct: 324 VGTSII--DMYCKCGRVETARLAFDRMKNKNVR 354
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/488 (40%), Positives = 289/488 (59%), Gaps = 33/488 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIH V+ G S+ + L+ LY K + K A ++FD MP+
Sbjct: 144 GKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQ--------------- 188
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ + W ++I G +NG ++ LF M +P+ TIV
Sbjct: 189 -----------------RTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVS 231
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+LS+CSQLGAL+ G W+H Y + DLN ++G +LINMY+RCG++ KA +VF+ MKER+
Sbjct: 232 LLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERN 291
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V T+ ++I+G MHG +A+E+F EM G RP +TFV VL+AC+H GL+D G +F
Sbjct: 292 VVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFS 351
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITN-MKIAPDHIMLGSLLSACKIHGK 300
SM YG+ P +EH C+VD+ R G +AY FI + P + S+L AC++H
Sbjct: 352 SMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRN 411
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
LG ++A+ +L + G YV+LSN YA +G+ +R M ++K+ G S+IE
Sbjct: 412 FDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIE 471
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+N + + F +GD HPQ IY+ + EL GY P+ E ++HD+E+ E+++AL H
Sbjct: 472 INRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRYH 531
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LA+ +GL+ T TIR+VKNLR+C DCHS IK I+ I R+IIVRD+ RFHHF++G
Sbjct: 532 SEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKDG 591
Query: 481 TCSCGDYW 488
+CSC DYW
Sbjct: 592 SCSCLDYW 599
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 88/234 (37%), Gaps = 46/234 (19%)
Query: 157 LINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPT 216
LI++ G I A ++F + D ++SL+ + G SI+ V +R M+ G +
Sbjct: 65 LISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQS 124
Query: 217 KVTFVGVLNACSHGGLVDLGFEIFQS-MTRDYGIE------------------------- 250
TF V+ AC+ + LG EI M YG +
Sbjct: 125 NYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFD 184
Query: 251 --PQ--IEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQL 303
PQ I + ++ + G P+E+ + + PD + SLLS+C G L
Sbjct: 185 AMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDF 244
Query: 304 GEQIAKRLLDCRSADSGTYVL-------LSNAYASSGKWKEAVQIRAKMKEAGV 350
G + AD + L L N Y G +A ++ MKE V
Sbjct: 245 GCWLHDY------ADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNV 292
>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Vitis vinifera]
gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/489 (42%), Positives = 296/489 (60%), Gaps = 34/489 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +HG V+K GL + R +L+ +Y K GE A LF M E
Sbjct: 154 GLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVE--------------- 198
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+D V W A+I V+ G ++AL FREM ++P+ VTIV
Sbjct: 199 -----------------RDLVAWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVS 241
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
LSAC LG LE G I+ + + ID N IV A ++M ++CGD+DKA+ +F+EM +R+
Sbjct: 242 ALSACGHLGCLETGEEIYEFAREEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRN 301
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +++++I G A++G S +A+ +F M NQG++P VTF+ VL+ACSH G V+ G++ F
Sbjct: 302 VISWSTVIGGYAVNGESEKALALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFN 361
Query: 242 SMTR--DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
M + D I+P+ EHY C+VDLL R G EEAY+FI M I D + G+LL AC IH
Sbjct: 362 FMAQSDDKNIQPRKEHYACMVDLLGRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIHQ 421
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
++LG+ +A L + + +VLLSN YA++G+W ++R +MK+ G +K SS+
Sbjct: 422 NIKLGQHVADLLFELAPEIASYHVLLSNMYAAAGRWHCVEKVRQRMKKKGARKVAAYSSV 481
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E N EIH GD HPQ I K+++L + +K GY P T+ V HD+ED EKE L+
Sbjct: 482 EFNGEIHILYGGDKSHPQSASILAKLEDLLKQMKSMGYIPETDSVFHDVEDEEKESTLST 541
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI + LI+ P IRV+KNLR+C DCH+ KL++ IT R+II+RD+NRFHHF+N
Sbjct: 542 HSEKLAIAFSLINGSPKFPIRVMKNLRICGDCHTFCKLVSRITMREIIMRDKNRFHHFKN 601
Query: 480 GTCSCGDYW 488
G CSC D+W
Sbjct: 602 GICSCKDFW 610
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 116/216 (53%), Gaps = 1/216 (0%)
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
G + A ++F + W ++ G V+NG +A+ ++ +M+ VRP+ T V+
Sbjct: 83 GDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVI 142
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
AC++L L G +H ++ KH ++ V L+ MY + G++ A +F M ERD+
Sbjct: 143 KACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLV 202
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
+N+LIA G S +A++ FREM GI+P VT V L+AC H G ++ G EI++
Sbjct: 203 AWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYE-F 261
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM 279
R+ GI+ I + +D+ ++ G ++A + M
Sbjct: 262 AREEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEM 297
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 33/176 (18%)
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL 224
GD+ A Q+F+EM + +N+++ G +G +AV ++ +M + G+RP TF V+
Sbjct: 83 GDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVI 142
Query: 225 NACS-----------HGGLVDLGFEIFQS-------MTRDYG------------IEPQIE 254
AC+ HG +V G E + M +G +E +
Sbjct: 143 KACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLV 202
Query: 255 HYGCIVDLLSRVGRPEEAYDFITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQI 307
+ ++ + + G +A M +A PD + + S LSAC G L+ GE+I
Sbjct: 203 AWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEI 258
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/488 (40%), Positives = 289/488 (59%), Gaps = 33/488 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIH V+ G S+ + L+ LY K + K A ++FD MP+
Sbjct: 208 GKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQ--------------- 252
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ + W ++I G +NG ++ LF M +P+ TIV
Sbjct: 253 -----------------RTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVS 295
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+LS+CSQLGAL+ G W+H Y + DLN ++G +LINMY+RCG++ KA +VF+ MKER+
Sbjct: 296 LLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERN 355
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V T+ ++I+G MHG +A+E+F EM G RP +TFV VL+AC+H GL+D G +F
Sbjct: 356 VVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFS 415
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITN-MKIAPDHIMLGSLLSACKIHGK 300
SM YG+ P +EH C+VD+ R G +AY FI + P + S+L AC++H
Sbjct: 416 SMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRN 475
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
LG ++A+ +L + G YV+LSN YA +G+ +R M ++K+ G S+IE
Sbjct: 476 FDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIE 535
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+N + + F +GD HPQ IY+ + EL GY P+ E ++HD+E+ E+++AL H
Sbjct: 536 INRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRYH 595
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LA+ +GL+ T TIR+VKNLR+C DCHS IK I+ I R+IIVRD+ RFHHF++G
Sbjct: 596 SEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKDG 655
Query: 481 TCSCGDYW 488
+CSC DYW
Sbjct: 656 SCSCLDYW 663
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 88/234 (37%), Gaps = 46/234 (19%)
Query: 157 LINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPT 216
LI++ G I A ++F + D ++SL+ + G SI+ V +R M+ G +
Sbjct: 129 LISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQS 188
Query: 217 KVTFVGVLNACSHGGLVDLGFEIFQS-MTRDYGIE------------------------- 250
TF V+ AC+ + LG EI M YG +
Sbjct: 189 NYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFD 248
Query: 251 --PQ--IEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQL 303
PQ I + ++ + G P+E+ + + PD + SLLS+C G L
Sbjct: 249 AMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDF 308
Query: 304 GEQIAKRLLDCRSADSGTYVL-------LSNAYASSGKWKEAVQIRAKMKEAGV 350
G + AD + L L N Y G +A ++ MKE V
Sbjct: 309 GCWLHDY------ADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNV 356
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/437 (43%), Positives = 285/437 (65%), Gaps = 2/437 (0%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
T +++ YV+ G VE A +VFS + KD V W+AM+ G + GE A+ +F E+ + ++
Sbjct: 432 TALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIK 491
Query: 114 PNEVTIVCVLSACSQLGA-LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
PNE T +L+ C+ A + G+ H + K R+D + V AL+ MY++ G+I+ A +
Sbjct: 492 PNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEE 551
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
VF+ +E+D+ ++NS+I+G A HG++++A+++F+EM + ++ VTF+GV AC+H GL
Sbjct: 552 VFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGL 611
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
V+ G + F M RD I P EH C+VDL SR G+ E+A I NM + ++L
Sbjct: 612 VEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTIL 671
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
+AC++H K +LG A++++ + DS YVLLSN YA SG W+E ++R M E V+K
Sbjct: 672 AACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKK 731
Query: 353 EPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE 412
EPG S IEV N+ + F+ GD HP ++QIY K+++L +K GY P T VL DI+D
Sbjct: 732 EPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEH 791
Query: 413 KEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRN 472
KE LA HSERLAI +GLI+T + + ++KNLRVC DCH +IKLIA I +R+I+VRD N
Sbjct: 792 KEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSN 851
Query: 473 RFHHF-ENGTCSCGDYW 488
RFHHF +G CSCGD+W
Sbjct: 852 RFHHFSSDGVCSCGDFW 868
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 173/378 (45%), Gaps = 71/378 (18%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
++H V+K G +++ R L+ Y KC DA++LF E I C
Sbjct: 316 QLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKE-------------IGC---- 358
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
V + V WTAMI G ++N A+DLF EM+R VRPNE T +L
Sbjct: 359 --------------VGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL 404
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
+A + E +H+ + K + + VG AL++ Y + G +++A +VF + ++D+
Sbjct: 405 TALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIV 460
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS------------HGG 231
+++++AG A G + A++MF E+ GI+P + TF +LN C+ HG
Sbjct: 461 AWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGF 520
Query: 232 LV----DLGFEIFQSMTRDYGIEPQIE---------------HYGCIVDLLSRVGRPEEA 272
+ D + ++ Y + IE + ++ ++ G+ +A
Sbjct: 521 AIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKA 580
Query: 273 YDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL-DCRSADSGTY-VLLSN 327
D M K+ D + + +AC G ++ GE+ ++ DC+ A + + + +
Sbjct: 581 LDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVD 640
Query: 328 AYASSGKWKEAVQIRAKM 345
Y+ +G+ ++A+++ M
Sbjct: 641 LYSRAGQLEKAMKVIENM 658
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 161/374 (43%), Gaps = 69/374 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H Q +K G + S LV+ Y K FKD +
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRK---------------------- 149
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
VF +K ++ V WT +I G RN L LF MQ + +PN T
Sbjct: 150 ----------VFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAA 199
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
L ++ G G +H+ + K+ +D V +LIN+Y +CG++ KA +F++ + +
Sbjct: 200 ALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKS 259
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HG 230
V T+NS+I+G A +G +EA+ MF M +R ++ +F V+ C+ H
Sbjct: 260 VVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHC 319
Query: 231 GLVDLGFEIFQSMTRDYGIEPQ-----------IEHYGCIVDLLSRVGR---------PE 270
+V GF Q++ + + GC+ +++S E
Sbjct: 320 SVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKE 379
Query: 271 EAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSN 327
EA D + MK + P+ +L+A + ++ Q+ K + RS+ GT +L +
Sbjct: 380 EAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYE-RSSTVGTALL--D 436
Query: 328 AYASSGKWKEAVQI 341
AY GK +EA ++
Sbjct: 437 AYVKLGKVEEAAKV 450
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 86/148 (58%), Gaps = 2/148 (1%)
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
S+ ++ Y + G +E+A EVF R + KD V W +MI G ++G+ +ALD+F+EM++ V
Sbjct: 533 SSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKV 592
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKH-RIDLNHIVGGALINMYSRCGDIDKAL 171
+ + VT + V +AC+ G +E G M + +I ++++YSR G ++KA+
Sbjct: 593 KMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAM 652
Query: 172 QVFEEMKERDVTT-YNSLIAGLAMHGRS 198
+V E M +T + +++A +H ++
Sbjct: 653 KVIENMPNPAGSTIWRTILAACRVHKKT 680
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/487 (40%), Positives = 291/487 (59%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++ +KLG S L+ +Y + G DA + FD + E
Sbjct: 395 GEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFE--------------- 439
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K+ + + +ID +N AL+LF E++ + + T
Sbjct: 440 -----------------KNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFAS 482
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+LS + +G + G IH+ + K + LN V ALI+MYSRCG+I+ A QVFE+M++R+
Sbjct: 483 LLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRN 542
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ S+I G A HG + +A+E+F +M+ +G+RP +VT++ VL+ACSH GLV+ G++ F+
Sbjct: 543 VISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFK 602
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM ++G+ P++EHY CIVD+L R G EA FI +M D ++ + L AC++HG L
Sbjct: 603 SMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNL 662
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LG+ AK +++ D Y+LLSN YAS KW E IR MKE + KE GCS +EV
Sbjct: 663 ELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEV 722
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N++H+F +GD HP+ +IY ++Q L +K GY P+ + VLHD+E+ +KE L HS
Sbjct: 723 ENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHS 782
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E++A+ +GLIST IRV KNLR+C DCHS IK I+ T R+IIVRD NRFHH ++G
Sbjct: 783 EKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRDANRFHHIKDGR 842
Query: 482 CSCGDYW 488
CSC +YW
Sbjct: 843 CSCNEYW 849
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 166/355 (46%), Gaps = 40/355 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKC---GEFKDAMQLFDEMPECNDVVASTVMIN 58
G+++H Q ++ GL +R L+ +Y KC G A ++FD++ + N
Sbjct: 290 GQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHN---------- 339
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEM-ARALDLFREMQRDNVRPNEV 117
VFS WTAMI G V+ G ALDLFR M +V PN
Sbjct: 340 -------------VFS---------WTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHF 377
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T L AC+ L AL +G + ++ K + V +LI+MY+R G ID A + F+ +
Sbjct: 378 TFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDIL 437
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
E+++ +YN++I A + S EA+E+F E+ +QG+ + TF +L+ + G + G
Sbjct: 438 FEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGE 497
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
+I + + G++ ++ + SR G E A+ +M+ + I S+++
Sbjct: 498 QIHARVIKS-GLKLNQSVCNALISMYSRCGNIESAFQVFEDME-DRNVISWTSIITGFAK 555
Query: 298 HG-KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQ-IRAKMKEAGV 350
HG Q E K L + + TY+ + +A + G E + ++ E GV
Sbjct: 556 HGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGV 610
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 158/342 (46%), Gaps = 39/342 (11%)
Query: 48 NDVVASTVMINCYVE-HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
+DV +I+ +V+ G + +AF+VF ++ ++ V WT MI L++ G A+DLF +
Sbjct: 202 SDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLD 261
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC-- 164
M P+ T+ V+SAC+ + L LG+ +HS +H + L+ VG LINMY++C
Sbjct: 262 MIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSV 321
Query: 165 -GDIDKALQVFEEMKERDVTTYNSLIAGLAMH-GRSIEAVEMFREMINQGIRPTKVTFVG 222
G + A ++F+++ + +V ++ ++I G G EA+++FR MI + P TF
Sbjct: 322 DGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSS 381
Query: 223 VLNACSHGGLVDLGFEIFQSMTR------------------------------DYGIEPQ 252
L AC++ + +G ++F + D E
Sbjct: 382 TLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKN 441
Query: 253 IEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAK 309
+ Y ++D ++ EEA ++ I + + SLLS G + GEQI
Sbjct: 442 LISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHA 501
Query: 310 RLLDC-RSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
R++ + L + Y+ G + A Q+ M++ V
Sbjct: 502 RVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNV 543
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 156/379 (41%), Gaps = 75/379 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H ++ + L+ + T L+ LY KCG+++ A +F M D+++
Sbjct: 85 GTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLIS--------- 135
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
W+AM+ N RAL F +M + PNE
Sbjct: 136 ----------------------WSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAA 173
Query: 122 VLSACSQLGALELGRWIHSYMGKH-RIDLNHIVGGALINMYSRC-GDIDKALQVFEEMKE 179
ACS + +G I ++ K + + VG LI+M+ + GD+ A +VFE+M E
Sbjct: 174 ATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPE 233
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
R+ T+ +I L G + EA+++F +MI G P + T GV++AC++ L+ LG ++
Sbjct: 234 RNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQL 293
Query: 240 FQSMTRDYGIEPQ-------IEHYG-CIVD---------------------------LLS 264
R +G+ I Y C VD +
Sbjct: 294 HSQAIR-HGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQ 352
Query: 265 RVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL--LDCRSADS 319
+ G EEA D M + P+H S L AC L++GEQ+ L S +
Sbjct: 353 KGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNC 412
Query: 320 GTYVLLSNAYASSGKWKEA 338
L+S YA SG+ +A
Sbjct: 413 VANSLIS-MYARSGRIDDA 430
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 36/199 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G +IH +V+K GL+ N+S L+ +Y +CG + A Q+F++M + N V++ T +I +
Sbjct: 495 KGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRN-VISWTSIITGF 553
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+HG +AL+LF +M + VRPNEVT +
Sbjct: 554 AKHGFA-------------------------------TQALELFHKMLEEGVRPNEVTYI 582
Query: 121 CVLSACSQLGALELGRWIH--SYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
VLSACS +G + G W H S +H + ++++ R G + +A+Q M
Sbjct: 583 AVLSACSHVGLVNEG-WKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMP 641
Query: 179 ER-DVTTYNSLIAGLAMHG 196
+ D + + + +HG
Sbjct: 642 YKADALVWRTFLGACRVHG 660
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 106/253 (41%), Gaps = 38/253 (15%)
Query: 92 VRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH 151
+ NG + +A+ M P+ T L C + + ++G +H + + + L+
Sbjct: 42 INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101
Query: 152 IVGGALINMYSRCGDIDKALQVFEEM-KERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
+ +LI++YS+CG +KA +F M RD+ +++++++ A + A+ F +MI
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGC-IVDL------- 262
G P + F ACS V +G IF + + ++ + GC ++D+
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDV-CVGCGLIDMFVKGRGD 220
Query: 263 -------------------------LSRVGRPEEAYDFITNMKIA---PDHIMLGSLLSA 294
L + G EA D +M + PD L ++SA
Sbjct: 221 LVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISA 280
Query: 295 CKIHGKLQLGEQI 307
C L LG+Q+
Sbjct: 281 CANMELLLLGQQL 293
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/487 (41%), Positives = 292/487 (59%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G EIHG L+ GL + + L+ LY CG+ A LFD M
Sbjct: 329 GEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGM----------------- 371
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
EH + V W MI G +NG A++LFR+M D ++P E+ I+C
Sbjct: 372 EH---------------RSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMC 416
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V ACSQL AL LG+ +H + K + + V ++I+MY++ G I + ++F+ ++E+D
Sbjct: 417 VCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKD 476
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++N +IAG +HGR EA+E+F +M+ G++P TF G+L ACSH GLV+ G E F
Sbjct: 477 VASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFN 536
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M + IEP++EHY C+VD+L R GR ++A I M PD + SLLS+C+IHG L
Sbjct: 537 QMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNL 596
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
LGE++A +LL+ YVL+SN +A SGKW + ++R +MK+ G+QK+ GCS IEV
Sbjct: 597 GLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEV 656
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
++H F++GD P+ E++ + + L+ + GY+P T VLHD+E+ +K L HS
Sbjct: 657 GGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHS 716
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GL++T +RV KNLR+C DCH+ K I+ + R I+VRD RFHHF +G
Sbjct: 717 EKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGI 776
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 777 CSCGDYW 783
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 149/312 (47%), Gaps = 37/312 (11%)
Query: 43 EMPECNDVVASTVMINCYVEHGLVENAFE-VFSRVKVKDTVCWTAMIDGLVRNGEMARAL 101
+M +DV +I Y + GLVE A + VF + K W A++ G +N + +AL
Sbjct: 236 KMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKAL 295
Query: 102 DLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMY 161
DL+ +M + P+ TI +L ACS++ +L G IH + ++ + ++ +G +L+++Y
Sbjct: 296 DLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLY 355
Query: 162 SRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFV 221
CG A +F+ M+ R + ++N +IAG + +G EA+ +FR+M++ GI+P ++ +
Sbjct: 356 ICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIM 415
Query: 222 GVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKI 281
V ACS + LG +E + F +
Sbjct: 416 CVCGACSQLSALRLG---------------------------------KELHCFALKAHL 442
Query: 282 APDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQI 341
D + S++ G + L ++I RL R D ++ ++ Y G+ KEA+++
Sbjct: 443 TEDIFVSSSIIDMYAKGGCIGLSQRIFDRL---REKDVASWNVIIAGYGIHGRGKEALEL 499
Query: 342 RAKMKEAGVQKE 353
KM G++ +
Sbjct: 500 FEKMLRLGLKPD 511
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 132/302 (43%), Gaps = 57/302 (18%)
Query: 88 IDGLVRNGEMARALDLFR----EMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
I L +G + ALD + ++ D+ + +E V +L AC Q +E+GR +H +
Sbjct: 74 IKKLCESGNLKEALDFLQRESDDVVLDSAQRSEAMGV-LLQACGQRKDIEVGRRLHEMVS 132
Query: 144 KHRIDLNHIV-GGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAV 202
N V +I MYS CG + VF++++ +++ +N++++ + +A+
Sbjct: 133 ASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAM 192
Query: 203 EMFREMIN-QGIRPTKVTFVGVLNACSHGGLVDLGF-EIFQSMTRDYGIEPQIEHYGCIV 260
+F E+I+ +P T V+ AC+ GL+DLG +I M +
Sbjct: 193 SIFSELISVTEHKPDNFTLPCVIKACA--GLLDLGLGQIIHGMATK-------------M 237
Query: 261 DLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADS- 319
DL+S V F+ N IA ++GK L E+ KR+ D +
Sbjct: 238 DLVSDV--------FVGNALIA--------------MYGKCGLVEEAVKRVFDLMDTKTV 275
Query: 320 GTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE--------PGCS---SIEVNNEIHEF 368
++ L YA + ++A+ + +M ++G+ + CS S+ EIH F
Sbjct: 276 SSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGF 335
Query: 369 IL 370
L
Sbjct: 336 AL 337
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/494 (38%), Positives = 305/494 (61%), Gaps = 11/494 (2%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDA-------MQLFDEMPECNDVVAST 54
G I Q+L G N T + ++ C D Q+ + ND V T
Sbjct: 275 GLRIFNQMLAEGFNPNMYTFISILR---SCSSLSDVDLGKQVHAQIVKNSLDGNDFVG-T 330
Query: 55 VMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP 114
+++ Y ++ +E+A +F+R+ +D WT ++ G ++G+ +A+ F +MQR+ V+P
Sbjct: 331 ALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKP 390
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
NE T+ LS CS++ L+ GR +HS K + V AL++MY++CG ++ A VF
Sbjct: 391 NEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVF 450
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
+ + RD ++N++I G + HG+ +A++ F M+++G P +VTF+GVL+ACSH GL++
Sbjct: 451 DGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIE 510
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
G + F S+++ YGI P IEHY C+VD+L R G+ E FI MK+ + ++ ++L A
Sbjct: 511 EGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGA 570
Query: 295 CKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
CK+HG ++ GE+ A +L + Y+LLSN +A+ G W + +RA M GV+KEP
Sbjct: 571 CKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEP 630
Query: 355 GCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKE 414
GCS +EVN ++H F+ D HP+ +I+ K+Q+L Q + GY+P+T+ VLH++ D EK+
Sbjct: 631 GCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQ 690
Query: 415 WALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRF 474
L HSERLA+ + L+ST TIR+ KNLR+C DCH +K I+ IT ++++VRD N F
Sbjct: 691 ELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRDINCF 750
Query: 475 HHFENGTCSCGDYW 488
HHF+NG+CSC ++W
Sbjct: 751 HHFKNGSCSCQNFW 764
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 147/300 (49%), Gaps = 35/300 (11%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+ IHGQV+K G+ + LV +Y KCG A ++F E+PE
Sbjct: 209 EGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE-------------- 254
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+D V WTA+I G V G L +F +M + PN T +
Sbjct: 255 ------------------RDVVSWTALITGFVAEG-YGSGLRIFNQMLAEGFNPNMYTFI 295
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L +CS L ++LG+ +H+ + K+ +D N VG AL++MY++ ++ A +F + +R
Sbjct: 296 SILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKR 355
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D+ + ++AG A G+ +AV+ F +M +G++P + T L+ CS +D G ++
Sbjct: 356 DLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQL- 414
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM G + +VD+ ++ G E+A + + + ++ D + +++ HG+
Sbjct: 415 HSMAIKAGQSGDMFVASALVDMYAKCGCVEDA-EVVFDGLVSRDTVSWNTIICGYSQHGQ 473
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 138/320 (43%), Gaps = 35/320 (10%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D++ S + Y++ VEN ++ F + +++ ++ G + + ++
Sbjct: 123 SDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQL 182
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ PN T + +L C+ G L G+ IH + K I+ + + +L+N+Y++CG
Sbjct: 183 LVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSA 242
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+ A +VF E+ ERDV ++ +LI G G + +F +M+ +G P TF+ +L +C
Sbjct: 243 NYACKVFGEIPERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSC 301
Query: 228 SHGGLVDLGFEIFQSMTRD---------------YG---------------IEPQIEHYG 257
S VDLG ++ + ++ Y I+ + +
Sbjct: 302 SSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWT 361
Query: 258 CIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC 314
IV ++ G+ E+A M+ + P+ L S LS C L G Q+ +
Sbjct: 362 VIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKA 421
Query: 315 -RSADSGTYVLLSNAYASSG 333
+S D L + YA G
Sbjct: 422 GQSGDMFVASALVDMYAKCG 441
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 103/226 (45%), Gaps = 1/226 (0%)
Query: 47 CNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
C D + ++N YV+ ++ A +V + ++D W + + A+ LF
Sbjct: 21 CPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQLFYL 80
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M+ +R N+ ++SA + LG G IH+ + K+ + + ++ A + MY +
Sbjct: 81 MRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQS 140
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
++ Q F+ M ++ + N+L++G + + +++ +G P TF+ +L
Sbjct: 141 VENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKT 200
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
C+ G ++ G I + + GI P + +V++ ++ G A
Sbjct: 201 CASKGDLNEGKAIHGQVIKS-GINPDSHLWNSLVNVYAKCGSANYA 245
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/457 (43%), Positives = 277/457 (60%), Gaps = 1/457 (0%)
Query: 33 EFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLV 92
+ A + F PE D V T M++ Y++ G V A E F + V++ V W A++ G V
Sbjct: 157 DMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYV 216
Query: 93 RNGEMARALDLFREMQRD-NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH 151
+N AL LFR M R+ NV+PN T+ VL CS L AL G+ IH + K + N
Sbjct: 217 KNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNL 276
Query: 152 IVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ 211
VG +L++MY +CGD+ A ++F EM RDV +N++I+G A HG EA+ +F M ++
Sbjct: 277 TVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDE 336
Query: 212 GIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEE 271
G+ P +TFV VL AC H GL D G F+ M YGIEP+++HY C+VDLL R G+ E
Sbjct: 337 GVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLER 396
Query: 272 AYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYAS 331
A D I +M P G+LL+AC+++ L+ E A +L++ +G YV L+N YA
Sbjct: 397 AVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAG 456
Query: 332 SGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQI 391
+ +W + ++R MK+ V K PG S IE+ +HEF D HPQ I++K+ +L +
Sbjct: 457 ANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAER 516
Query: 392 VKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDC 451
+K GY P + VLHD+++ K L HSE+LAI +GLIST P T+R+ KNLRVC DC
Sbjct: 517 MKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLRVCGDC 576
Query: 452 HSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
H+ K+I+ I R+II+RD RFHHF G CSCGDYW
Sbjct: 577 HNAAKVISKIEDREIILRDTTRFHHFRGGHCSCGDYW 613
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 154/340 (45%), Gaps = 48/340 (14%)
Query: 15 RSNRSTRLKLVELYGKC-GEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVF 73
R +T L+ Y + G DA LFD +P D V+ +++C+ G + A +F
Sbjct: 45 RKTTATYNCLLAGYARALGRLADARHLFDRIPT-PDAVSYNTLLSCHFASGDADGARRLF 103
Query: 74 SRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ-RDNVRPNEVTIVCVLSACSQLGAL 132
+ + V+D V W M+ GL ++G + A +F M R++V N +V + + A
Sbjct: 104 ASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWN--AMVSGFACSRDMSAA 161
Query: 133 ELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGL 192
E W + K + ++ A+++ Y G++ KA++ FE M R++ ++N+++AG
Sbjct: 162 E--EWFRNAPEKG----DAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGY 215
Query: 193 AMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEP 251
+ + +A+ +FR M+ + ++P T VL CS+ + G +I
Sbjct: 216 VKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQI------------ 263
Query: 252 QIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
H C+ LSR + + + G L SACK+ G++ + +A
Sbjct: 264 ---HQWCMKLPLSR--------NLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVA--- 309
Query: 312 LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
+ + + YA G KEA+ + +MK+ GV+
Sbjct: 310 ----------WNAMISGYAQHGDGKEAINLFERMKDEGVE 339
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 43/209 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G++IH +KL L N + LV +Y KCG+ A +LF EM DVVA MI+ Y
Sbjct: 260 GKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEM-HTRDVVAWNAMISGYA 318
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+HG DG A++LF M+ + V PN +T V
Sbjct: 319 QHG------------------------DG-------KEAINLFERMKDEGVEPNWITFVA 347
Query: 122 VLSACSQLGALELGRWIHSYMGKHRI-----DLNHIVGGALINMYSRCGDIDKALQVFEE 176
VL+AC G + G I + G + ++H ++++ R G +++A+ +
Sbjct: 348 VLTACIHTGLCDFG--IRCFEGMQELYGIEPRVDHY--SCMVDLLCRAGKLERAVDLIRS 403
Query: 177 MK-ERDVTTYNSLIAGLAMHGRSIEAVEM 204
M E + Y +L+A ++ +++E E+
Sbjct: 404 MPFEPHPSAYGTLLAACRVY-KNLEFAEL 431
>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 681
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/440 (44%), Positives = 282/440 (64%), Gaps = 1/440 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DVV +T +++ Y ++GL++ A VF + ++ V W+AMI G +NG+ AL LFR MQ
Sbjct: 243 DVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQ 302
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
++P+ +V L ACS +G L+LGR +H ++ + R D N I+G A I+MYS+CG +
Sbjct: 303 ASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVR-RFDFNCILGTAAIDMYSKCGSLA 361
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +F + +RD+ +N++IA HGR +A+ +F+EM G+RP TF +L+A S
Sbjct: 362 SAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALS 421
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLV+ G F M + I P +HY C+VDLL+R G EEA D +T+MK P +
Sbjct: 422 HSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIW 481
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+LLS C + KL+LGE IA +L+ + D G L+SN YA++ KW + Q+R MK++
Sbjct: 482 VALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDS 541
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
G +K PGCSSIE+ H F++ D HPQRE+I K+ +L ++ GY P TE V HD+
Sbjct: 542 GSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYHDL 601
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
E+ KE L+ HSERLAI +GL++T P T + ++KNLRVC DCH IK I+ I R+I+V
Sbjct: 602 EEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVV 661
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD RFHHF++G CSC DYW
Sbjct: 662 RDAKRFHHFKDGVCSCRDYW 681
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 157/296 (53%), Gaps = 14/296 (4%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+DV + +++ Y G + +A +VF R+ +D V W+ M+ G V G+ A+ ++R M
Sbjct: 141 DDVFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRM 200
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ D V+ +EV ++ V+ AC+ + +G +H ++ +H + ++ + +L++MY++ G +
Sbjct: 201 REDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLL 260
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
D A +VF M R+ +++++I+G A +G+S EA+ +FR M GI+P V L AC
Sbjct: 261 DVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLAC 320
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI-----VDLLSRVGRPEEAYDFITNMKIA 282
S+ G + LG + + R + + CI +D+ S+ G A + NM
Sbjct: 321 SNIGFLKLGRSVHGFIVRRF-------DFNCILGTAAIDMYSKCGSLASA-QMLFNMISD 372
Query: 283 PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC-RSADSGTYVLLSNAYASSGKWKE 337
D I+ ++++ C HG+ Q + + + + D T+ L +A + SG +E
Sbjct: 373 RDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEE 428
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 138/291 (47%), Gaps = 52/291 (17%)
Query: 93 RNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWI--HSYMGKHRIDLN 150
R G A AL +FR + RP+ T LSAC++LG L G + ++ ++ D+
Sbjct: 86 RRGSPASALRVFRALP-PAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDV- 143
Query: 151 HIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
V +L+++Y+R G + A++VF M RD T+++++AG G+ ++A++M+R M
Sbjct: 144 -FVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRE 202
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
G++ +V +GV+ AC+ V +G + + R +G+ + +VD+ ++ G
Sbjct: 203 DGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLR-HGMRMDVVTATSLVDMYAKNGL-- 259
Query: 271 EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYA 330
L AC++ G + + ++ + + +A
Sbjct: 260 --------------------LDVACRVFGLMVHRNDV-------------SWSAMISGFA 286
Query: 331 SSGKWKEAVQIRAKMKEAGVQKEPG--------CSSI---EVNNEIHEFIL 370
+G+ EA+++ M+ +G+Q + G CS+I ++ +H FI+
Sbjct: 287 QNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIV 337
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/486 (39%), Positives = 297/486 (61%), Gaps = 34/486 (6%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
R++H ++K GL S+ R L+++Y K + +A+ +FDEMP
Sbjct: 172 RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMP----------------- 214
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
+D V W ++I G +N + AL+LF+ M+R ++ T+ V
Sbjct: 215 ---------------TRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSV 259
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L AC+ L LELGR +H ++ K DL I+ ALI+MY +CG ++ A F M E+DV
Sbjct: 260 LRACTGLALLELGRQVHVHVLKFDQDL--ILNNALIDMYCKCGSLEDANSAFSRMVEKDV 317
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
++++++AGLA +G S +A+E+F M G RP +T +GVL ACSH GLV+ G+ F+S
Sbjct: 318 ISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRS 377
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
M + +G++P EHYGC++DLL R GR +EA I M+ PD + +LL AC++H +
Sbjct: 378 MKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVD 437
Query: 303 LGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVN 362
L AK++++ D+GTY+LLSN YA++ +W++ ++R M G++K PGCS IEV+
Sbjct: 438 LAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVD 497
Query: 363 NEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSE 422
+IH FILGD HP+ E+I +++ +L + V GY P T VL D+E +KE +L HSE
Sbjct: 498 KQIHVFILGDTSHPKIEEIVQRLNDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRYHSE 557
Query: 423 RLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTC 482
+LAI +GL++ T+R+ KNLR+C DCH K+++ + R I++RD R+HHF++G C
Sbjct: 558 KLAIMFGLMNLSREKTVRIRKNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQDGVC 617
Query: 483 SCGDYW 488
SCGDYW
Sbjct: 618 SCGDYW 623
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 183/427 (42%), Gaps = 51/427 (11%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
++N YV+ L+E A ++F + ++ V WT MI N +AL M R+ VR
Sbjct: 94 NTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAY-SNKLNDKALKCLILMFREGVR 152
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
PN T VL AC L L R +H + K ++ + V ALI++YS+ D+D AL V
Sbjct: 153 PNMFTYSSVLRACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGV 209
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV 233
F+EM RD+ +NS+I G A + EA+ +F+ M G + T VL AC+ L+
Sbjct: 210 FDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALL 269
Query: 234 DLGFEIFQSMTR----------------------------DYGIEPQIEHYGCIVDLLSR 265
+LG ++ + + +E + + +V L++
Sbjct: 270 ELGRQVHVHVLKFDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQ 329
Query: 266 VGRPEEAYDFITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT- 321
G +A + +MK + P++I + +L AC G ++ G + + D G
Sbjct: 330 NGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGRE 389
Query: 322 -YVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQ 380
Y L + +G+ EAV++ +M+ E ++ +LG R
Sbjct: 390 HYGCLIDLLGRAGRLDEAVKLIHEME------------CEPDSVTWRTLLGACR--VHRN 435
Query: 381 IYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIR 440
+ + K+I++LE T ++L +I + W + G+ T + I
Sbjct: 436 VDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIE 495
Query: 441 VVKNLRV 447
V K + V
Sbjct: 496 VDKQIHV 502
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 130/298 (43%), Gaps = 58/298 (19%)
Query: 96 EMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGG 155
++ RA+ M+R V + +T ++ CS GA++ G+ +H ++ + V
Sbjct: 35 DLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVN 94
Query: 156 ALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLA--MHGRSIEA-VEMFREMINQG 212
L+NMY + +++A +F+EM ER+V ++ ++I+ + ++ ++++ + MFRE G
Sbjct: 95 TLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLNDKALKCLILMFRE----G 150
Query: 213 IRPTKVTFVGVLNACS--------HGGLVDLGFE------------------------IF 240
+RP T+ VL AC H G++ G E +F
Sbjct: 151 VRPNMFTYSSVLRACDGLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVF 210
Query: 241 QSM-TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIA---PDHIMLGSLLSACK 296
M TRD + + I+ ++ EA + MK A D L S+L AC
Sbjct: 211 DEMPTRDLVV------WNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACT 264
Query: 297 IHGKLQLGEQIAKRLLDCRSADSGTYVLLSNA----YASSGKWKEAVQIRAKMKEAGV 350
L+LG Q+ +L ++L+NA Y G ++A ++M E V
Sbjct: 265 GLALLELGRQVHVHVLKFDQD-----LILNNALIDMYCKCGSLEDANSAFSRMVEKDV 317
>gi|147860852|emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]
Length = 562
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/485 (42%), Positives = 294/485 (60%), Gaps = 6/485 (1%)
Query: 6 HGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN-DVVASTVMINCYVEHG 64
H +++K G + S LV Y C A QL DEMP D++ + ++I ++ G
Sbjct: 82 HAKIIKFGYGTYPSLITSLVSTYAHCDCLDLAHQLLDEMPYWGFDLITANLIIASLMKVG 141
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
+ A VF ++ +D V W +MI G VRN AL FREM NV P+ T V++
Sbjct: 142 EFDFAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFFREMLNSNVEPDGFTFASVIN 201
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
C++LG+ +H M + +I LN I+ ALI++YS+CG I+ A +VF ++ DV+
Sbjct: 202 GCARLGSSHHAELVHGLMIEKKIQLNFILSSALIDLYSKCGRINTAKKVFNSIQHDDVSV 261
Query: 185 YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT 244
+NS+I GLA+HG +++A+ +F +M + + P +TF+G+L ACSH GLV+ G F M
Sbjct: 262 WNSMINGLAIHGLALDAIGVFSQMEMESVSPDSITFIGILTACSHCGLVEQGRRYFDLMR 321
Query: 245 RDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLG 304
R Y I+PQ+EHYG +VDLL R G EEAY I M + PD ++ +LLSAC+ +LG
Sbjct: 322 RHYSIQPQLEHYGAMVDLLGRAGLVEEAYAMIKAMPMEPDIVIWRALLSACRNFKNPELG 381
Query: 305 E-QIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNN 363
E IAK +SG Y+LLSN Y S KW A ++R MK GV+K G S +E+
Sbjct: 382 EVAIAK----ISHLNSGDYILLSNMYCSLEKWDSAERVREMMKRDGVRKNRGRSWVELGG 437
Query: 364 EIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSER 423
IH+F GD HP+ IYK ++ L + KLEG+ P+T++VL D+ D E+E L HSE+
Sbjct: 438 VIHQFKAGDRSHPETGAIYKVLEGLIRRTKLEGFMPATDLVLMDVSDEEREENLNSHSEK 497
Query: 424 LAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCS 483
LA+ Y ++ T P T IRV KNLR C+DCH +K+++ + R IIVRDR RFH FE G CS
Sbjct: 498 LALAYVILKTSPGTEIRVSKNLRTCHDCHCWMKILSRLLSRVIIVRDRIRFHQFEGGLCS 557
Query: 484 CGDYW 488
C DYW
Sbjct: 558 CRDYW 562
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 38/191 (19%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
+HG +++ ++ N L++LY KCG A ++F+ + +DV MIN HG
Sbjct: 215 VHGLMIEKKIQLNFILSSALIDLYSKCGRINTAKKVFNSIQH-DDVSVWNSMINGLAIHG 273
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
L +A VFS +M+ ++V P+ +T + +L+
Sbjct: 274 LALDAIGVFS-------------------------------QMEMESVSPDSITFIGILT 302
Query: 125 ACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-ER 180
ACS G +E GR M +H + L H GA++++ R G +++A + + M E
Sbjct: 303 ACSHCGLVEQGRRYFDLMRRHYSIQPQLEHY--GAMVDLLGRAGLVEEAYAMIKAMPMEP 360
Query: 181 DVTTYNSLIAG 191
D+ + +L++
Sbjct: 361 DIVIWRALLSA 371
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/489 (40%), Positives = 299/489 (61%), Gaps = 2/489 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN-DVVASTVMINCY 60
G+++H +L+ G+ + L+ Y K G + A ++ D+ + +V++ T ++ Y
Sbjct: 499 GKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGY 558
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V+ G + A E+F + +D + WTAMI G +NG+ A++LFR M PN T+
Sbjct: 559 VKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLA 618
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSAC+ L L+ G+ IH + + + V A+I +Y+R G + A +VF+++ R
Sbjct: 619 AVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWR 678
Query: 181 DVT-TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
T T+ S+I +A HG +AV +F EM+ G++P +T+VGVL+AC+H G VD G
Sbjct: 679 KETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRY 738
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
++ M ++GI PQ+ HY C+VDL +R G EA++FI M +APD ++ GSLL+AC++
Sbjct: 739 YEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRK 798
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
L E A +LL +SG Y L+N Y++ G+W +A +I K+ GV+KE G S
Sbjct: 799 NADLAELAAGKLLSIDPHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWT 858
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
V ++H F D+ HPQR+ IY+K E+ + +K G+ P VLHD++D KE L+
Sbjct: 859 HVRGKVHVFGADDVLHPQRDSIYRKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSR 918
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GLIST TT+R++KNLRVCNDCH+ IK I+ R+IIVRD RFHHF +
Sbjct: 919 HSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISKFVDREIIVRDATRFHHFRD 978
Query: 480 GTCSCGDYW 488
G CSC DYW
Sbjct: 979 GYCSCKDYW 987
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 167/353 (47%), Gaps = 23/353 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGE----FKDAMQLFDEMPECN-DVVASTVM 56
GR IH +K GL + L+ Y G F++A LFD++P + +
Sbjct: 228 GRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLFDDIPYARRNAFTWNSL 287
Query: 57 INCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
++ Y + G + +A VF+ + +D V WT MI GL R+G A+ F +M + P++
Sbjct: 288 LSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFAPSQ 347
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
T+ VLS+C+ + A +GR +H ++ K + V +++ MY +CGD + A VFE
Sbjct: 348 FTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVFER 407
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
M+ R V+++N +++ GR AV MF M+ + I V++ ++ + GL +
Sbjct: 408 MQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSI----VSWNTIIAGYNQNGLDGMA 463
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLS-----RVGRPEEAYDFITNMKIAPDHIMLGSL 291
+ F M +EP ++ + ++G+ +Y T M + ++ +L
Sbjct: 464 LKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQ--IMNAL 521
Query: 292 LSACKIHGKLQLGEQIAKRLLD-CRSADSG--TYVLLSNAYASSGKWKEAVQI 341
+S G + + A+R++D AD ++ L Y G K+A +I
Sbjct: 522 ISTYAKSGSV----ETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREI 570
>gi|5280987|emb|CAB46001.1| hypothetical protein [Arabidopsis thaliana]
gi|7268109|emb|CAB78447.1| hypothetical protein [Arabidopsis thaliana]
Length = 686
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/489 (40%), Positives = 304/489 (62%), Gaps = 18/489 (3%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H + ++ + LV++Y KCG A +FD + + ++ T M++ Y
Sbjct: 192 GRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSI-RVKNTISWTAMVSGYA 250
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR-PNEVTIV 120
+ G E A E+F + VK+ WTA+I G V++G+ A +F EM+R+ V + + +
Sbjct: 251 KSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLS 310
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
++ AC+ L A GR +H G ALI+MY++C D+ A +F M+ R
Sbjct: 311 SIVGACANLAASIAGRQVH--------------GNALIDMYAKCSDVIAAKDIFSRMRHR 356
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++ SLI G+A HG++ +A+ ++ +M++ G++P +VTFVG++ ACSH G V+ G E+F
Sbjct: 357 DVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELF 416
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
QSMT+DYGI P ++HY C++DLL R G +EA + I M PD +LLSACK G+
Sbjct: 417 QSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGR 476
Query: 301 LQLGEQIAKRLLDC-RSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
Q+G +IA L+ + D TY+LLSN YAS+ W + + R K+ E V+K+PG SS+
Sbjct: 477 GQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSV 536
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKL-EGYSPSTEVVLHDIEDWEKEWALA 418
EV E F G+ HP +E I++ +++L++ +++ GY P T +LHD+++ EKE L
Sbjct: 537 EVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLF 596
Query: 419 IHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFE 478
HSER A+ YGL+ P T IR+VKNLRVC DCH ++K I+ IT+R+IIVRD R+HHF+
Sbjct: 597 WHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFK 656
Query: 479 NGTCSCGDY 487
G CSC D+
Sbjct: 657 GGKCSCNDF 665
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 112/248 (45%), Gaps = 41/248 (16%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
+ +H ++KLG+ LV +YGKCG A+Q+FDEMP
Sbjct: 90 AKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPH--------------- 134
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARAL-DLFREMQRDNVRPNEVTIV 120
+D + W +++ L + + L +RP++
Sbjct: 135 -----------------RDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFS 177
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
++ AC+ LG+++ GR +H + + +V +L++MY++CG ++ A VF+ ++ +
Sbjct: 178 ALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVK 237
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTK--VTFVGVLNACSHGGLVDLGFE 238
+ ++ ++++G A GR EA+E+FR I P K ++ +++ G F
Sbjct: 238 NTISWTAMVSGYAKSGRKEEALELFR------ILPVKNLYSWTALISGFVQSGKGLEAFS 291
Query: 239 IFQSMTRD 246
+F M R+
Sbjct: 292 VFTEMRRE 299
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 105/219 (47%), Gaps = 12/219 (5%)
Query: 132 LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAG 191
L + +H+++ K I + L+N+Y +CG ALQVF+EM RD + S++
Sbjct: 87 LTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTA 146
Query: 192 L---AMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF-QSMTRDY 247
L + G+++ + G+RP F ++ AC++ G +D G ++ + +Y
Sbjct: 147 LNQANLSGKTLSVFSS--VGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEY 204
Query: 248 GIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQI 307
+ ++ +VD+ ++ G A ++++ + I +++S G+ + ++
Sbjct: 205 ANDEVVK--SSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSGYAKSGRKEEALEL 261
Query: 308 AKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
R+L ++ S T ++ + + SGK EA + +M+
Sbjct: 262 F-RILPVKNLYSWTALI--SGFVQSGKGLEAFSVFTEMR 297
>gi|242047514|ref|XP_002461503.1| hypothetical protein SORBIDRAFT_02g003670 [Sorghum bicolor]
gi|241924880|gb|EER98024.1| hypothetical protein SORBIDRAFT_02g003670 [Sorghum bicolor]
Length = 786
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/471 (42%), Positives = 286/471 (60%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H +K G + R L+ YG CG+ ++FDE+P DVV ++ YV
Sbjct: 149 GAHVHALAVKAGAAGDLYVRNALIHFYGVCGDVAAMRKVFDELPLVRDVVTWNAVLAGYV 208
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G+V A EVF + ++D V W+ ++ G V+ GE+ AL +F+ M V+ NE IV
Sbjct: 209 RAGMVGVAREVFDGMPMRDEVSWSTVVGGYVKEGELEVALGVFKNMVVQGVKANEAAIVT 268
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
LSA +QLG LE G+++H + + + ++ +G AL++MYS+CG + A +VF+ M RD
Sbjct: 269 ALSAAAQLGLLEQGKFVHEVIKRAGVAMSMNLGAALVDMYSKCGSVAAAKEVFDAMPWRD 328
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +NS+I GLA HG +AV++F + +++G PT +TFVGVLNACS GLVD G F+
Sbjct: 329 VFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTNITFVGVLNACSRTGLVDEGRWYFK 388
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M YGIE ++EHYGC+VDLLSR G +EA + I M I PD ++ G++LSACK HG +
Sbjct: 389 LMAEKYGIESEMEHYGCMVDLLSRAGLVQEAIELIEGMHIPPDPVLWGTVLSACKRHGLV 448
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
LG + +L++ A G YVLL++ YA + KW E ++R M G K G S +E
Sbjct: 449 DLGITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVRKLMSNRGTSKSAGWSLMEA 508
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ +H+F++GD+ H QIY + + + + GY P VLHDI D EK A+ +HS
Sbjct: 509 HGIVHKFLVGDMDHKDSVQIYNMLCMIDRRLAEAGYVPDVSSVLHDIGDEEKVHAIKVHS 568
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRN 472
ERLAI YG I + + IR+VKNL VC DCH K++ + R+IIVRD N
Sbjct: 569 ERLAIAYGFIVVEAGSPIRIVKNLSVCGDCHEFSKMVTKVFGREIIVRDAN 619
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 83/198 (41%), Gaps = 34/198 (17%)
Query: 134 LGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-ERDVTTYNSLIAGL 192
+G +H+ K + V ALI+ Y CGD+ +VF+E+ RDV T+N+++AG
Sbjct: 148 MGAHVHALAVKAGAAGDLYVRNALIHFYGVCGDVAAMRKVFDELPLVRDVVTWNAVLAGY 207
Query: 193 ---AMHGRSIE----------------------------AVEMFREMINQGIRPTKVTFV 221
M G + E A+ +F+ M+ QG++ + V
Sbjct: 208 VRAGMVGVAREVFDGMPMRDEVSWSTVVGGYVKEGELEVALGVFKNMVVQGVKANEAAIV 267
Query: 222 GVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKI 281
L+A + GL++ G + + + R G+ + +VD+ S+ G A + M
Sbjct: 268 TALSAAAQLGLLEQGKFVHEVIKRA-GVAMSMNLGAALVDMYSKCGSVAAAKEVFDAMPW 326
Query: 282 APDHIMLGSLLSACKIHG 299
D S++ HG
Sbjct: 327 R-DVFAWNSMICGLATHG 343
>gi|224141427|ref|XP_002324074.1| predicted protein [Populus trichocarpa]
gi|222867076|gb|EEF04207.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/501 (41%), Positives = 311/501 (62%), Gaps = 19/501 (3%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+ G ++K+GL ++ +Y KCG ++ ++F EM E N VV+ + ++ V
Sbjct: 141 GRQAQGCLVKMGLGLGVKVCNAIMNMYVKCGLVEEVRRVFCEMNERN-VVSWSTLLEGVV 199
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPNEVTIV 120
+ VEN VF + ++ V WT MI G V NG L EM R + N VT+
Sbjct: 200 KWEGVENGRVVFDEMPERNEVGWTIMIAGYVGNGFSREGFLLLDEMVLRFRLGLNFVTLS 259
Query: 121 CVLSACSQLGALELGRWIHSY----MGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
+LSAC+Q G + +GRW+H Y MG+ +++ +VG AL++MY++CG ID A +VF+
Sbjct: 260 SILSACAQSGDVLMGRWVHVYALKGMGR---EMHIMVGTALVDMYAKCGPIDMAFKVFKY 316
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
+ +R+V +N+++ GLAMHGR +++F +MI + +P +TF+ VL+ACSH GLVD G
Sbjct: 317 LPKRNVVAWNAMLGGLAMHGRGKFVLDIFPKMIEEA-KPDDLTFMAVLSACSHSGLVDQG 375
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
+ F+S+ +YG P+IEHY C+VD+L R G EEA I M + P+ ++LGSLL +C
Sbjct: 376 YHYFRSLESEYGTTPKIEHYACMVDILGRAGHLEEAVMLIKKMPMCPNEVVLGSLLGSCN 435
Query: 297 IHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGC 356
HGKLQLGE+I + L+ ++ +VLLSN Y GK +A +R +K G++K PG
Sbjct: 436 AHGKLQLGERILQELIQMDGHNTEYHVLLSNMYVLEGKQDKANSLRQILKSKGIRKVPGV 495
Query: 357 SSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDW----- 411
SSI V IH+F GD HP ++IY + + Q ++L GY P+T + D
Sbjct: 496 SSIYVGGNIHQFSAGDKSHPLTKEIYHALNNMIQRLRLAGYVPNTTNQVFPGSDGREGSS 555
Query: 412 ----EKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
EKE AL +HSE+LA+C+G ISTKP + + KNLR+C DCHS IK+++ I R+I+
Sbjct: 556 EEMEEKEQALFLHSEKLAVCFGHISTKPGAPLYIFKNLRICQDCHSAIKIVSKIYNREIV 615
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
+RDRNRFH F++G+CSC DYW
Sbjct: 616 IRDRNRFHCFKHGSCSCSDYW 636
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 157/371 (42%), Gaps = 73/371 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRL---KLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMIN 58
G+++H +L GL S+ L LY CG A LF ++P +
Sbjct: 34 GKKLHAVILTSGLASSSPNTFLLNALHHLYASCGVTSSARHLFYQIPRSH---------- 83
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNG-EMARALDLFREMQRDNVRPNEV 117
KD WT ++ LV++G + + F+EM+++ V ++V
Sbjct: 84 --------------------KDVTDWTTLLTSLVQHGTKPSEGFFFFKEMRKEGVVLDDV 123
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
++ V C+++ L +GR + K + L V A++NMY +CG +++ +VF EM
Sbjct: 124 AMISVFVLCTRVEDLGMGRQAQGCLVKMGLGLGVKVCNAIMNMYVKCGLVEEVRRVFCEM 183
Query: 178 KERDVTTYNSL-------------------------------IAGLAMHGRSIEAVEMFR 206
ER+V ++++L IAG +G S E +
Sbjct: 184 NERNVVSWSTLLEGVVKWEGVENGRVVFDEMPERNEVGWTIMIAGYVGNGFSREGFLLLD 243
Query: 207 EMINQ-GIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSR 265
EM+ + + VT +L+AC+ G V +G + + G E I +VD+ ++
Sbjct: 244 EMVLRFRLGLNFVTLSSILSACAQSGDVLMGRWVHVYALKGMGREMHIMVGTALVDMYAK 303
Query: 266 VGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTY 322
G + A + ++ + + MLG L +HG+ + I ++++ D T+
Sbjct: 304 CGPIDMAFKVFKYLPKRNVVAWNAMLGGL----AMHGRGKFVLDIFPKMIEEAKPDDLTF 359
Query: 323 VLLSNAYASSG 333
+ + +A + SG
Sbjct: 360 MAVLSACSHSG 370
>gi|225456505|ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
[Vitis vinifera]
Length = 523
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/485 (42%), Positives = 294/485 (60%), Gaps = 6/485 (1%)
Query: 6 HGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN-DVVASTVMINCYVEHG 64
H +++K G + S LV Y C A QL DEMP D++ + ++I ++ G
Sbjct: 43 HAKIIKFGYGTYPSLITSLVSTYAHCDCLDLAHQLLDEMPYWGFDLITANLIIASLMKVG 102
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
+ A VF ++ +D V W +MI G VRN AL FREM NV P+ T V++
Sbjct: 103 EFDFAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFFREMLNSNVEPDGFTFASVIN 162
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
C++LG+ +H M + +I LN I+ ALI++YS+CG I+ A +VF ++ DV+
Sbjct: 163 GCARLGSSHHAELVHGLMIEKKIQLNFILSSALIDLYSKCGRINTAKKVFNSIQHDDVSV 222
Query: 185 YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT 244
+NS+I GLA+HG +++A+ +F +M + + P +TF+G+L ACSH GLV+ G F M
Sbjct: 223 WNSMINGLAIHGLALDAIGVFSQMEMESVSPDSITFIGILTACSHCGLVEQGRRYFDLMR 282
Query: 245 RDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLG 304
R Y I+PQ+EHYG +VDLL R G EEAY I M + PD ++ +LLSAC+ +LG
Sbjct: 283 RHYSIQPQLEHYGAMVDLLGRAGLVEEAYAMIKAMPMEPDIVIWRALLSACRNFKNPELG 342
Query: 305 E-QIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNN 363
E IAK +SG Y+LLSN Y S KW A ++R MK GV+K G S +E+
Sbjct: 343 EVAIAK----ISHLNSGDYILLSNMYCSLEKWDSAERVREMMKRDGVRKNRGRSWVELGG 398
Query: 364 EIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSER 423
IH+F GD HP+ IYK ++ L + KLEG+ P+T++VL D+ D E+E L HSE+
Sbjct: 399 VIHQFKAGDRSHPETGAIYKVLEGLIRRTKLEGFMPATDLVLMDVSDEEREENLNSHSEK 458
Query: 424 LAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCS 483
LA+ Y ++ T P T IRV KNLR C+DCH +K+++ + R IIVRDR RFH FE G CS
Sbjct: 459 LALAYVILKTSPGTEIRVSKNLRTCHDCHCWMKILSRLLSRVIIVRDRIRFHQFEGGLCS 518
Query: 484 CGDYW 488
C DYW
Sbjct: 519 CRDYW 523
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 38/191 (19%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
+HG +++ ++ N L++LY KCG A ++F+ + +DV MIN HG
Sbjct: 176 VHGLMIEKKIQLNFILSSALIDLYSKCGRINTAKKVFNSIQH-DDVSVWNSMINGLAIHG 234
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
L +A VFS +M+ ++V P+ +T + +L+
Sbjct: 235 LALDAIGVFS-------------------------------QMEMESVSPDSITFIGILT 263
Query: 125 ACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-ER 180
ACS G +E GR M +H + L H GA++++ R G +++A + + M E
Sbjct: 264 ACSHCGLVEQGRRYFDLMRRHYSIQPQLEHY--GAMVDLLGRAGLVEEAYAMIKAMPMEP 321
Query: 181 DVTTYNSLIAG 191
D+ + +L++
Sbjct: 322 DIVIWRALLSA 332
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/440 (43%), Positives = 293/440 (66%), Gaps = 2/440 (0%)
Query: 50 VVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
VV +++ Y + G++++A +VF+ + VKD V W +I G +NG + A++++R M+
Sbjct: 410 VVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEE 469
Query: 110 -DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
++ N+ T V +L+A + +GAL+ G IH ++ K + L+ VG LI++Y +CG +
Sbjct: 470 CREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLV 529
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A+ +F ++ +N++I+ +HG +A+++FREM ++G++P VTF+ +L+ACS
Sbjct: 530 DAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACS 589
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLVD G F M ++YGI+P ++HYGC+VDLL R G E AYDFI +M + PD +
Sbjct: 590 HSGLVDEGKWFFHLM-QEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIW 648
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
G+LL AC+IHG ++LG+ + RL + S + G YVLLSN YA+ GKW+ ++R+ +E
Sbjct: 649 GALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARER 708
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
G++K PG SSIEVN + F G+ HP+ ++IY +++ L +K GY P VL D+
Sbjct: 709 GLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILTAKMKSLGYIPDYSFVLQDV 768
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
E+ EKE L HSERLAI +G+IST P + IR+ KNLRVC DCH+ K I+ IT+R+I+V
Sbjct: 769 EEDEKEHILTSHSERLAIAFGIISTPPKSAIRIFKNLRVCGDCHNATKFISRITEREIVV 828
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD RFHHF+NG CSCGDYW
Sbjct: 829 RDSKRFHHFKNGICSCGDYW 848
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 162/347 (46%), Gaps = 35/347 (10%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR+IH V KLG + + L+ +Y + G A LFD+MP
Sbjct: 190 DGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMP--------------- 234
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+D W AMI GL++NG A+ALD+ EM+ + + + VT+
Sbjct: 235 -----------------FRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVA 277
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L C+QLG + IH Y+ KH ++ V ALINMY++ G++ A +VF++M R
Sbjct: 278 SILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLR 337
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++NS+IA + + A F +M G+ P +T V + + + +
Sbjct: 338 DVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVH 397
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ R + + ++D+ +++G + A+ + N+ D + +L+S +G
Sbjct: 398 GFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHK-VFNLIPVKDVVSWNTLISGYTQNGL 456
Query: 301 LQLGEQIAKRLLDCR--SADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
++ + + +CR + GT+V + AYA G ++ ++I +
Sbjct: 457 ASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHL 503
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 162/364 (44%), Gaps = 52/364 (14%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
IH V+K GL L+ +Y K G DA ++F +M
Sbjct: 295 IHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQM-------------------- 334
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
++D V W ++I +N + A F +MQ + + P+ +T+V + S
Sbjct: 335 ------------FLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLAS 382
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIV-GGALINMYSRCGDIDKALQVFEEMKERDVT 183
+Q + R +H ++ + + +V G A+++MY++ G ID A +VF + +DV
Sbjct: 383 IAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVV 442
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREM-------INQGIRPTKVTFVGVLNACSHGGLVDLG 236
++N+LI+G +G + EA+E++R M +NQG T+V +L A +H G + G
Sbjct: 443 SWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQG------TWVSILAAYAHVGALQQG 496
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
I + + + + C++DL + GR +A + + +++S
Sbjct: 497 MRIHGHLIKT-NLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVP-RESSVPWNAIISCHG 554
Query: 297 IHGKLQLGEQIAKRLLD-CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ---K 352
IHG + ++ + + D D T++ L +A + SG E M+E G++ K
Sbjct: 555 IHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLK 614
Query: 353 EPGC 356
GC
Sbjct: 615 HYGC 618
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 121/243 (49%), Gaps = 6/243 (2%)
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR-DN 111
S ++N Y G V + F +++ KD W +MI VRNG A+D F ++
Sbjct: 111 SIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTK 170
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
+ + T VL AC L GR IH ++ K + V +LI+MYSR G + A
Sbjct: 171 FQADFYTFPPVLKACQTLVD---GRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIAR 227
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
+F++M RD+ ++N++I+GL +G + +A+++ EM +GI VT +L C+ G
Sbjct: 228 SLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLG 287
Query: 232 LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSL 291
+ I + + +G+E ++ ++++ ++ G +A M + D + S+
Sbjct: 288 DISTATLIHLYVIK-HGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLR-DVVSWNSI 345
Query: 292 LSA 294
++A
Sbjct: 346 IAA 348
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 98/187 (52%), Gaps = 4/187 (2%)
Query: 14 LRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMINCYVEHGLVENAF 70
++ N+ T + ++ Y G + M++ + + N DV T +I+ Y + G + +A
Sbjct: 473 IKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAM 532
Query: 71 EVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLG 130
+F +V + +V W A+I +G +AL LFREMQ + V+P+ VT + +LSACS G
Sbjct: 533 CLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSG 592
Query: 131 ALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-ERDVTTYNSLI 189
++ G+W M ++ I + G ++++ R G ++ A ++M D + + +L+
Sbjct: 593 LVDEGKWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALL 652
Query: 190 AGLAMHG 196
+HG
Sbjct: 653 GACRIHG 659
>gi|7488184|pir||E71401 probable selenium-binding protein - Arabidopsis thaliana
Length = 1070
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/489 (40%), Positives = 304/489 (62%), Gaps = 18/489 (3%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H + ++ + LV++Y KCG A +FD + + ++ T M++ Y
Sbjct: 61 GRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSI-RVKNTISWTAMVSGYA 119
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR-PNEVTIV 120
+ G E A E+F + VK+ WTA+I G V++G+ A +F EM+R+ V + + +
Sbjct: 120 KSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLS 179
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
++ AC+ L A GR +H G ALI+MY++C D+ A +F M+ R
Sbjct: 180 SIVGACANLAASIAGRQVH--------------GNALIDMYAKCSDVIAAKDIFSRMRHR 225
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++ SLI G+A HG++ +A+ ++ +M++ G++P +VTFVG++ ACSH G V+ G E+F
Sbjct: 226 DVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELF 285
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
QSMT+DYGI P ++HY C++DLL R G +EA + I M PD +LLSACK G+
Sbjct: 286 QSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGR 345
Query: 301 LQLGEQIAKRLLDC-RSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
Q+G +IA L+ + D TY+LLSN YAS+ W + + R K+ E V+K+PG SS+
Sbjct: 346 GQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSV 405
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKL-EGYSPSTEVVLHDIEDWEKEWALA 418
EV E F G+ HP +E I++ +++L++ +++ GY P T +LHD+++ EKE L
Sbjct: 406 EVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLF 465
Query: 419 IHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFE 478
HSER A+ YGL+ P T IR+VKNLRVC DCH ++K I+ IT+R+IIVRD R+HHF+
Sbjct: 466 WHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFK 525
Query: 479 NGTCSCGDY 487
G CSC D+
Sbjct: 526 GGKCSCNDF 534
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 90/171 (52%), Gaps = 9/171 (5%)
Query: 79 KDTVCWTAMIDGLVRNGEMARALDLFREMQRDN-VRPNEVTIVCVLSACSQLGALELGRW 137
+D + W +++ L + + L +F + + +RP++ ++ AC+ LG+++ GR
Sbjct: 4 RDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQ 63
Query: 138 IHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR 197
+H + + +V +L++MY++CG ++ A VF+ ++ ++ ++ ++++G A GR
Sbjct: 64 VHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGR 123
Query: 198 SIEAVEMFREMINQGIRPTK--VTFVGVLNACSHGGLVDLGFEIFQSMTRD 246
EA+E+FR I P K ++ +++ G F +F M R+
Sbjct: 124 KEEALELFR------ILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRE 168
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/444 (43%), Positives = 280/444 (63%), Gaps = 2/444 (0%)
Query: 46 ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
EC +V T ++ Y + E A +F + KD V W+AM+ + G+ A ++F
Sbjct: 436 ECTSIVG-TALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFI 494
Query: 106 EMQRDNVRPNEVTIVCVLSAC-SQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC 164
+M ++PNE TI V+ AC S ++LGR H+ KHR V AL++MY+R
Sbjct: 495 KMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARK 554
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL 224
G I+ A +FE +RD+ ++NS+++G A HG S +A+++FR+M +GI VTF+ V+
Sbjct: 555 GSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVI 614
Query: 225 NACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPD 284
C+H GLV+ G F SM RDYGI P +EHY C+VDL SR G+ +EA I M
Sbjct: 615 MGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAG 674
Query: 285 HIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAK 344
++ +LL ACK+H ++LG+ A++LL DS TYVLLSN Y+++GKWKE ++R
Sbjct: 675 PMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKL 734
Query: 345 MKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVV 404
M V+KE GCS I++ N++H FI D HP EQIY K++ + +K EGY P T
Sbjct: 735 MDTKKVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYAKLRAMTTKLKQEGYCPDTSFA 794
Query: 405 LHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKR 464
LH++ + +KE LA+HSERLA+ +GLI+T P + + KNLRVC DCH++IK+++ I R
Sbjct: 795 LHEVAEEQKEAMLAMHSERLALAFGLIATPPGAPLHIFKNLRVCGDCHTVIKMVSKIEDR 854
Query: 465 KIIVRDRNRFHHFENGTCSCGDYW 488
+I++RD +RFHHF +G CSCGD+W
Sbjct: 855 EIVMRDCSRFHHFNSGVCSCGDFW 878
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 150/285 (52%), Gaps = 2/285 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV T +++ Y++ V + +VF + ++ V WT+++ G +++G ++ ++LF M+
Sbjct: 138 DVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMR 197
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ V PN VT VLS + G ++LGR +H+ K V +L+NMY++CG ++
Sbjct: 198 AEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVE 257
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+A VF M+ RD+ ++N+L+AGL ++G +EA+++F + + T+ T+ V+ C+
Sbjct: 258 EARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCA 317
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
+ + L ++ S+ + G ++D S+ G+ A D M + + +
Sbjct: 318 NIKQLGLARQLHSSVLK-RGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSW 376
Query: 289 GSLLSACKIHGKLQLGEQIAKRLL-DCRSADSGTYVLLSNAYASS 332
++++ C +G + L + R+ D + + TY + A +S
Sbjct: 377 TAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVAS 421
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 182/403 (45%), Gaps = 63/403 (15%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVK-VKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
T +++ Y + G + NA ++F + ++ V WTAMI+G ++NG++ A LF M+ D V
Sbjct: 345 TALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGV 404
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
PN+ T +L+A L IH+ + K + IVG AL+ YS+ + ++AL
Sbjct: 405 APNDFTYSTILTA----SVASLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALS 460
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC-SHGG 231
+F+ + ++DV ++++++ A G S A +F +M G++P + T V++AC S
Sbjct: 461 IFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTA 520
Query: 232 LVDLGFE---------------IFQSMTRDYGIEPQIEHYGCIV------DLLS------ 264
VDLG + + ++ Y + IE CI DL+S
Sbjct: 521 GVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLS 580
Query: 265 ---RVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSAD 318
+ G ++A D M+ I D + S++ C G ++ G+ R D + D
Sbjct: 581 GYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQ----RYFDSMARD 636
Query: 319 SGT------YVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGD 372
G Y + + Y+ +GK EA+ + M S + +LG
Sbjct: 637 YGITPTMEHYACMVDLYSRAGKLDEAMSLIEGM------------SFPAGPMVWRTLLGA 684
Query: 373 IRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
+ + ++ K E +++ LE + +T V+L +I +W
Sbjct: 685 CKVHKNVELGKLAAE--KLLSLEPFDSATYVLLSNIYSAAGKW 725
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 94/226 (41%), Gaps = 33/226 (14%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H Q +K G S L+ +Y KCG
Sbjct: 224 GRRVHAQSVKFGCCSTVFVCNSLMNMYAKCG----------------------------- 254
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
LVE A VF ++ +D V W ++ GLV NG AL LF + + + T
Sbjct: 255 ---LVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYAT 311
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-ER 180
V+ C+ + L L R +HS + K V AL++ YS+ G + AL +F M +
Sbjct: 312 VIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQ 371
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+V ++ ++I G +G A +F M G+ P T+ +L A
Sbjct: 372 NVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTA 417
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/491 (41%), Positives = 301/491 (61%), Gaps = 15/491 (3%)
Query: 13 GLRSNRSTRLKLVELYGKCGEF--KDAMQLFDEMPECN-DVVASTVMINCYVEHGLVENA 69
GL +N +T +V + G F K+A+ F + D +++ Y G ++ A
Sbjct: 400 GLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIA 459
Query: 70 FEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ-----------RDNVRPNEVT 118
+F +++ +D V W MI G V + AL L +MQ R +++PN +T
Sbjct: 460 MRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSIT 519
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
++ +L +C+ L AL G+ IH+Y K+ + + VG AL++MY++CG + + +VF+++
Sbjct: 520 LMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 579
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
+++V T+N +I MHG EA+++ R M+ QG++P +VTF+ V ACSH G+VD G
Sbjct: 580 QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLR 639
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI-MLGSLLSACKI 297
IF M DYG+EP +HY C+VDLL R GR +EAY + M + SLL A +I
Sbjct: 640 IFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRI 699
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
H L++GE A+ L+ + YVLL+N Y+S+G W +A ++R MKE GV+KEPGCS
Sbjct: 700 HNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCS 759
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IE +E+H+F+ GD HPQ E++ ++ L + ++ EGY P T VLH++E+ EKE L
Sbjct: 760 WIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILL 819
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LAI +G+++T P T IRV KNLRVCNDCH K I+ I R+II+RD RFH F
Sbjct: 820 CGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRF 879
Query: 478 ENGTCSCGDYW 488
+NGTCSCGDYW
Sbjct: 880 KNGTCSCGDYW 890
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 119/242 (49%), Gaps = 37/242 (15%)
Query: 2 GREIHGQVLKLGLRSNRSTRLK-LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
G++IH V K G + T LV LY KCG+F
Sbjct: 116 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDF-------------------------- 149
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G V ++VF R+ ++ V W ++I L + AL+ FR M +NV P+ T+V
Sbjct: 150 ---GAV---YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLV 203
Query: 121 CVLSACSQLG---ALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
V++ACS L L +G+ +H+Y G + +LN + L+ MY + G + + +
Sbjct: 204 SVVTACSNLPMPEGLMMGKQVHAY-GLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSF 262
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
RD+ T+N++++ L + + +EA+E REM+ +G+ P + T VL ACSH ++ G
Sbjct: 263 GGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGK 322
Query: 238 EI 239
E+
Sbjct: 323 EL 324
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 121/242 (50%), Gaps = 14/242 (5%)
Query: 46 ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
E N + +T ++ Y + G + ++ + +D V W ++ L +N ++ AL+ R
Sbjct: 233 ELNSFIINT-LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLR 291
Query: 106 EMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKH-RIDLNHIVGGALINMYSRC 164
EM + V P+E TI VL ACS L L G+ +H+Y K+ +D N VG AL++MY C
Sbjct: 292 EMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNC 351
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM-INQGIRPTKVTFVGV 223
+ +VF+ M +R + +N++IAG + + EA+ +F M + G+ T GV
Sbjct: 352 KQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGV 411
Query: 224 LNACSHGGLVDL-----GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITN 278
+ AC G GF + + + RD ++ ++D+ SR+G+ + A
Sbjct: 412 VPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQ------NTLMDMYSRLGKIDIAMRIFGK 465
Query: 279 MK 280
M+
Sbjct: 466 ME 467
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 129/276 (46%), Gaps = 36/276 (13%)
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W ++ VR+ + A+ + +M ++P+ +L A + L +ELG+ IH+++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 144 KHRIDLNHI-VGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAV 202
K ++ + V L+N+Y +CGD +VF+ + ER+ ++NSLI+ L + A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 203 EMFREMINQGIRPTKVTFVGVLNACSH----GGLV-------------DLGFEIFQSMTR 245
E FR M+++ + P+ T V V+ ACS+ GL+ +L I ++
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVA 244
Query: 246 DYGIEPQIEHYGCIV------------DLLSRVGRPE---EAYDFITNM---KIAPDHIM 287
YG ++ ++ +LS + + E EA +++ M + PD
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT 304
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV 323
+ S+L AC L+ G+++ L S D ++V
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFV 340
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 125/265 (47%), Gaps = 46/265 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+EIH +K L ++ + LV++Y KCG + + ++FD++P+ N V+ V+I Y
Sbjct: 535 KGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKN-VITWNVIIMAY 593
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG NG+ A+DL R M V+PNEVT +
Sbjct: 594 GMHG-----------------------------NGQ--EAIDLLRMMMVQGVKPNEVTFI 622
Query: 121 CVLSACSQLGALELGRWIHSYMGK-HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V +ACS G ++ G I M + ++ + ++++ R G I +A Q+ M
Sbjct: 623 SVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLM-NMMP 681
Query: 180 RDVT---TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVT-FVGVLNACSHGGLVDL 235
RD ++SL+ +H ++E E+ + + Q + P + +V + N S GL D
Sbjct: 682 RDFNKAGAWSSLLGASRIH-NNLEIGEIAAQNLIQ-LEPNVASHYVLLANIYSSAGLWDK 739
Query: 236 GFEIFQSMTRDYGI--EP---QIEH 255
E+ ++M ++ G+ EP IEH
Sbjct: 740 ATEVRRNM-KEQGVRKEPGCSWIEH 763
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/487 (41%), Positives = 292/487 (59%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G EIHG L+ GL + + L+ LY CG+ A LFD M
Sbjct: 427 GEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGM----------------- 469
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
EH + V W MI G +NG A++LFR+M D ++P E+ I+C
Sbjct: 470 EH---------------RSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMC 514
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V ACSQL AL LG+ +H + K + + V ++I+MY++ G I + ++F+ ++E+D
Sbjct: 515 VCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKD 574
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++N +IAG +HGR EA+E+F +M+ G++P TF G+L ACSH GLV+ G E F
Sbjct: 575 VASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFN 634
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M + IEP++EHY C+VD+L R GR ++A I M PD + SLLS+C+IHG L
Sbjct: 635 QMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNL 694
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
LGE++A +LL+ YVL+SN +A SGKW + ++R +MK+ G+QK+ GCS IEV
Sbjct: 695 GLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEV 754
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
++H F++GD P+ E++ + + L+ + GY+P T VLHD+E+ +K L HS
Sbjct: 755 GGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHS 814
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GL++T +RV KNLR+C DCH+ K I+ + R I+VRD RFHHF +G
Sbjct: 815 EKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGI 874
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 875 CSCGDYW 881
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 153/351 (43%), Gaps = 68/351 (19%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
+E+HG + GL+SN + Y +CG + ++FD M
Sbjct: 327 KELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLM------------------ 368
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
K W A++ G +N + +ALDL+ +M + P+ TI +
Sbjct: 369 --------------DTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSL 414
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L ACS++ +L G IH + ++ + ++ +G +L+++Y CG A +F+ M+ R +
Sbjct: 415 LLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSL 474
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
++N +IAG + +G EA+ +FR+M++ GI+P ++ + V ACS + LG
Sbjct: 475 VSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLG------ 528
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
+E + F + D + S++ G +
Sbjct: 529 ---------------------------KELHCFALKAHLTEDIFVSSSIIDMYAKGGCIG 561
Query: 303 LGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
L ++I RL R D ++ ++ Y G+ KEA+++ KM G++ +
Sbjct: 562 LSQRIFDRL---REKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPD 609
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 118/229 (51%), Gaps = 4/229 (1%)
Query: 47 CNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
CND V +T +I Y G ++ VF +++ K+ W A++ RN A+ +F E
Sbjct: 31 CNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSE 90
Query: 107 M-QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG 165
+ +P+ T+ CV+ AC+ L L LG+ IH K + + VG ALI MY +CG
Sbjct: 91 LISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCG 150
Query: 166 DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI--NQGIRPTKVTFVGV 223
+++A++VFE M ER++ ++NS+I G + +G E+ FREM+ + P T V V
Sbjct: 151 LVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTV 210
Query: 224 LNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
L C+ ++ G + + G+ ++ ++D+ S+ EA
Sbjct: 211 LPVCAGEEDIEKGMAV-HGLAVKLGLNEELMVNNSLIDMYSKCRFLSEA 258
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 133/302 (44%), Gaps = 37/302 (12%)
Query: 43 EMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALD 102
+M +DV +I Y + GLVE A +VF + ++ V W ++I G NG + + +
Sbjct: 129 KMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFN 188
Query: 103 LFREM--QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINM 160
FREM ++ P+ T+V VL C+ +E G +H K ++ +V +LI+M
Sbjct: 189 AFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDM 248
Query: 161 YSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG--IRPTKV 218
YS+C + +A +F++ ++++ ++NS+I G A + ++M + ++ +
Sbjct: 249 YSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEF 308
Query: 219 TFVGVLNAC-----------SHGGLVDLGFE--------IFQSMTR-----------DYG 248
T + VL C HG G + + TR D
Sbjct: 309 TILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLM 368
Query: 249 IEPQIEHYGCIVDLLSRVGRPEEAYDF---ITNMKIAPDHIMLGSLLSACKIHGKLQLGE 305
+ + ++ ++ P +A D +T+ + PD +GSLL AC L GE
Sbjct: 369 DTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGE 428
Query: 306 QI 307
+I
Sbjct: 429 EI 430
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIV-GGALINMYSRCGDIDKALQVFEEMKER 180
+L AC Q +E+GR +H + N V +I MYS CG + VF++++ +
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMIN-QGIRPTKVTFVGVLNACSHGGLVDLGF-E 238
++ +N++++ + +A+ +F E+I+ +P T V+ AC+ GL+DLG +
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACA--GLLDLGLGQ 121
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM 279
I M + + ++ + + G EEA +M
Sbjct: 122 IIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHM 162
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/492 (40%), Positives = 304/492 (61%), Gaps = 8/492 (1%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPE-------CNDVVASTVM 56
E+ G + + G +R+T L L+ G + K ++ + CN + +++
Sbjct: 211 EVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSI- 269
Query: 57 INCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
I+ Y V A ++F ++VKD V W ++I G + G+ +AL+LF M P+E
Sbjct: 270 IDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDE 329
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
VT++ VL+AC+Q+ AL LG + SY+ K +N +VG ALI MY+ CG + A +VF+E
Sbjct: 330 VTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDE 389
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
M E+++ ++ G +HGR EA+ +F EM+ +G+ P + F VL+ACSH GLVD G
Sbjct: 390 MPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEG 449
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
EIF MTRDY +EP+ HY C+VDLL R G +EAY I NMK+ P+ + +LLSAC+
Sbjct: 450 KEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSACR 509
Query: 297 IHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGC 356
+H ++L A++L + YV LSN YA+ +W++ +RA + + ++K P
Sbjct: 510 LHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALVAKRRLRKPPSY 569
Query: 357 SSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWA 416
S +E+N +H+F +GD H Q + IY K+++L + +K GY P T +VL+D+E+ KE
Sbjct: 570 SFVELNKMVHQFFVGDTSHEQSDDIYAKLKDLNEQLKKAGYKPDTSLVLYDVEEEIKEKM 629
Query: 417 LAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHH 476
L HSERLA+ + LI+T P TTIR+ KNLRVC DCH++IK+I+ +T R+II+RD RFHH
Sbjct: 630 LWDHSERLALAFALINTGPGTTIRITKNLRVCGDCHTVIKMISKLTNREIIMRDICRFHH 689
Query: 477 FENGTCSCGDYW 488
F +G CSCG YW
Sbjct: 690 FRDGLCSCGGYW 701
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 148/310 (47%), Gaps = 39/310 (12%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV +++ Y + G VE A VF R+ V+D W M+ G V+NGE A ++F +M+
Sbjct: 158 DVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMR 217
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM---GKHRIDLNHIVGGALINMYSRCG 165
RD + T++ +LSAC + L++G+ IH Y+ G+ N + ++I+MY C
Sbjct: 218 RDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCE 277
Query: 166 DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
+ A ++FE ++ +DV ++NSLI+G G + +A+E+F M+ G P +VT + VL
Sbjct: 278 SVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLA 337
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDH 285
AC+ + LG ++ + G +V++ + + +
Sbjct: 338 ACNQISALRLGAT----------VQSYVVKRGYVVNV-------------VVGTALIGMY 374
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
GSL+ AC++ E K L C ++ + G+ +EA+ I +M
Sbjct: 375 ANCGSLVCACRV-----FDEMPEKNLPAC--------TVMVTGFGIHGRGREAISIFYEM 421
Query: 346 KEAGVQKEPG 355
GV + G
Sbjct: 422 LGKGVTPDEG 431
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 166/355 (46%), Gaps = 48/355 (13%)
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
+T + CY G + A +F ++ +K++ W +MI G N +RAL L+ +M
Sbjct: 61 ATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQ 120
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
+P+ T VL AC L E+GR +H+ + ++ + VG ++++MY + GD++ A
Sbjct: 121 KPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARV 180
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
VF+ M RD+T++N++++G +G + A E+F +M G + T + +L+AC G +
Sbjct: 181 VFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSAC--GDV 238
Query: 233 VDL--GFEIFQSMTRD---------YGIEPQIEHY------GC---------IVDLLS-- 264
+DL G EI + R+ + + I+ Y C + D++S
Sbjct: 239 MDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWN 298
Query: 265 -------RVGRPEEAYDFITNMKI---APDHIMLGSLLSACKIHGKLQLGEQIAKRLLD- 313
+ G +A + M + PD + + S+L+AC L+LG + ++
Sbjct: 299 SLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKR 358
Query: 314 --CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIH 366
+ GT ++ YA+ G A ++ +M E + P C+ + IH
Sbjct: 359 GYVVNVVVGTALI--GMYANCGSLVCACRVFDEMPEKNL---PACTVMVTGFGIH 408
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 34/196 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G + V+K G N L+ +Y CG A ++FDEMPE N + A TVM+ +
Sbjct: 348 GATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKN-LPACTVMVTGFG 406
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG R E A+ +F EM V P+E
Sbjct: 407 IHG----------------------------RGRE---AISIFYEMLGKGVTPDEGIFTA 435
Query: 122 VLSACSQLGALELGRWIHSYMGK-HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSACS G ++ G+ I M + + ++ L+++ R G +D+A V E MK +
Sbjct: 436 VLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLK 495
Query: 181 -DVTTYNSLIAGLAMH 195
+ + +L++ +H
Sbjct: 496 PNEDVWTALLSACRLH 511
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 60/123 (48%), Gaps = 1/123 (0%)
Query: 150 NHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
N + L Y+ CG + A +F+++ ++ +NS+I G A + A+ ++ +M+
Sbjct: 57 NTYLATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKML 116
Query: 210 NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRP 269
+ G +P T+ VL AC L ++G ++ ++ G+E + I+ + + G
Sbjct: 117 HFGQKPDNFTYPFVLKACGDLLLREMGRKV-HALVVVGGLEEDVYVGNSILSMYFKFGDV 175
Query: 270 EEA 272
E A
Sbjct: 176 EAA 178
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/488 (40%), Positives = 291/488 (59%), Gaps = 33/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR IHG V+K+GL + + L Y KCG
Sbjct: 273 QGRSIHGFVIKMGLEDEPALLISLTAFYAKCG---------------------------- 304
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
LV A F ++K + + W AMI G +NG A++LF M N++P+ VT+
Sbjct: 305 ----LVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVR 360
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+ A +Q+G+LEL +W+ Y+ K + V +LI+MY++CG ++ A +VF+ ++
Sbjct: 361 SAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDK 420
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++++I G +HG+ EA+ ++ M G+ P VTF+G+L AC+H GLV G+E+F
Sbjct: 421 DVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELF 480
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
M +D+ I P+ EHY C+VDLL R G EA FI + I P + G+LLSACKI+
Sbjct: 481 HCM-KDFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRC 539
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+ LGE A +L ++G YV LSN YASS W +R M+E G+ K+ G S IE
Sbjct: 540 VTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIE 599
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+N ++ F +GD HP ++I+ ++Q L++ +K G+ P TE VLHD+ EKE L+ H
Sbjct: 600 INGKLQAFHVGDKSHPMAKEIFDELQRLERRLKEVGFVPYTESVLHDLNYEEKEENLSFH 659
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SER+A+ YGLIST P TT+R+ KNLR C +CHS IKLI+ + +R+IIVRD NRFHHF++G
Sbjct: 660 SERIAVAYGLISTAPGTTLRITKNLRACVNCHSAIKLISKLVEREIIVRDANRFHHFKDG 719
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 720 LCSCGDYW 727
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 146/297 (49%), Gaps = 36/297 (12%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
IHGQ++K G S+ + LV LY KCG A +FD G
Sbjct: 176 IHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFD---------------------G 214
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
L + V WT++I G +NG+ AL +F +M+ + V+P+ + +V +L
Sbjct: 215 LYH-----------RTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILR 263
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
A + + LE GR IH ++ K ++ + +L Y++CG + A F++MK +V
Sbjct: 264 AYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIM 323
Query: 185 YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT 244
+N++I+G A +G + EAV +F MI++ I+P VT + A + G ++L + ++
Sbjct: 324 WNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVS 383
Query: 245 R-DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ +YG + + ++D+ ++ G E A + + D +M +++ +HG+
Sbjct: 384 KSNYGSDIFVN--TSLIDMYAKCGSVEFARR-VFDRNSDKDVVMWSAMIMGYGLHGQ 437
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 165/412 (40%), Gaps = 97/412 (23%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
+IH +++ GL+ N KLV G+ A +LFDE CY
Sbjct: 74 QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEF--------------CY--- 116
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
D W A+I RN ++++R M+ V P+ T VL
Sbjct: 117 ---------------PDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVL 161
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
AC++L L IH + K+ + V L+ +Y++CG I A VF+ + R +
Sbjct: 162 KACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIV 221
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HGGL 232
++ S+I+G A +G+++EA+ MF +M N G++P + V +L A + HG +
Sbjct: 222 SWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFV 281
Query: 233 VDLGFE----IFQSMTRDYG---------------IEPQIEHYGCIVDLLSRVGRPEEA- 272
+ +G E + S+T Y + + ++ ++ G EEA
Sbjct: 282 IKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAV 341
Query: 273 --YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGE------------------------- 305
+ ++ + I PD + + S + A G L+L +
Sbjct: 342 NLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMY 401
Query: 306 ------QIAKRLLDCRS-ADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
+ A+R+ D S D + + Y G+ EA+ + MK+AGV
Sbjct: 402 AKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGV 453
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 94/219 (42%), Gaps = 42/219 (19%)
Query: 138 IHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR 197
IH+ + + N + L+N S G I A ++F+E DV +N++I + +
Sbjct: 75 IHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNNM 134
Query: 198 SIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYG 257
+ VEM+R M G+ P TF VL AC+ L+D G I QI YG
Sbjct: 135 YRDTVEMYRWMRWTGVHPDGFTFPYVLKACTE--LLDFGLSCI--------IHGQIIKYG 184
Query: 258 CIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC--- 314
D+ + G L +L + C G +AK + D
Sbjct: 185 FGSDVFVQNG--------------------LVALYAKCGHIG-------VAKVVFDGLYH 217
Query: 315 RSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
R+ S T ++ + YA +GK EA+++ ++M+ GV+ +
Sbjct: 218 RTIVSWTSII--SGYAQNGKAVEALRMFSQMRNNGVKPD 254
>gi|302786698|ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
gi|300157279|gb|EFJ23905.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
Length = 485
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/481 (40%), Positives = 302/481 (62%), Gaps = 5/481 (1%)
Query: 13 GLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMINCYVEHGLVENA 69
G+ N+ T + ++ + G ++ ++ + DV+ T ++N Y + VE A
Sbjct: 5 GVERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEEA 64
Query: 70 FEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM--QRDNVRPNEVTIVCVLSACS 127
F ++ + V W+AM+ +NG AL+L+REM R + PN VT + +L ACS
Sbjct: 65 RAAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACS 124
Query: 128 QLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNS 187
LGAL GR IH+ + + D + +V AL+N Y RCG + A VF+ M+ RDV +++S
Sbjct: 125 FLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSS 184
Query: 188 LIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDY 247
+I+ A GR EA+E++ M+++G P + F+ VL ACS+ G+V+ + F+S+ D
Sbjct: 185 MISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDT 244
Query: 248 GIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQI 307
+EP +EHY C+VD+L R G+ +A D + M P ++ ++LSACK++ ++ GE
Sbjct: 245 QVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAA 304
Query: 308 AKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHE 367
A+ + + +S Y+ L+N Y+++ + K+A +IR M+E G++K+PGCS IEV + +HE
Sbjct: 305 AEVVFELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHE 364
Query: 368 FILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAIC 427
FI GD HPQR++IY ++Q L + +K GY T+VVL D+E+ EKE L HSE+LAI
Sbjct: 365 FIAGDKMHPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIA 424
Query: 428 YGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDY 487
+GLIST P +R+VKNLRVC+DCH+ K+I+ +T R+I+VRD NRFHHF +G CSC DY
Sbjct: 425 FGLISTPPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFLDGMCSCNDY 484
Query: 488 W 488
W
Sbjct: 485 W 485
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 116/208 (55%), Gaps = 4/208 (1%)
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M+ V N+VT V VLS + G+LE GR +HS + ++++ IVG AL+NMY +C
Sbjct: 1 MEIRGVERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQS 60
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM--INQGIRPTKVTFVGVL 224
+++A FE++ +V ++++++A A +G + A+E++REM +G+ P +VTF+ +L
Sbjct: 61 VEEARAAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLL 120
Query: 225 NACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPD 284
+ACS G + G +I ++ + G + + +V+ R G +A M+ D
Sbjct: 121 DACSFLGALAEGRKIHAAVA-ERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMR-RRD 178
Query: 285 HIMLGSLLSACKIHGKLQLGEQIAKRLL 312
I S++SA G++ ++ R+L
Sbjct: 179 VISWSSMISAFAQRGRVDEAMELYHRML 206
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 99/219 (45%), Gaps = 6/219 (2%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR+IH V + G ++ LV YG+CG DA +FD M DV++ + MI+ +
Sbjct: 131 EGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRR-RDVISWSSMISAF 189
Query: 61 VEHGLVENAFEVFSRV----KVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN-VRPN 115
+ G V+ A E++ R+ + D + + +++ +G + + D FR + D V P
Sbjct: 190 AQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPT 249
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
C++ + G L + M H L ++ + +Y+ + A +V
Sbjct: 250 LEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVF 309
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIR 214
E+ + + Y +L + R +A + + M +GI+
Sbjct: 310 ELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIK 348
>gi|293335745|ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea mays]
gi|223948835|gb|ACN28501.1| unknown [Zea mays]
Length = 599
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/488 (41%), Positives = 297/488 (60%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR++H Q L+ GL ++ + L+ LY KC + A +FD M D
Sbjct: 144 EGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGM--AGD----------- 190
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
K+ V W+AM+ G R G + AL LFREMQ V P+EVT+V
Sbjct: 191 ------------------KNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGVEPDEVTMV 232
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+SAC++ GAL+LG+W+H+Y+ + I ++ + ALI+MY++CG I++A VF+ M E+
Sbjct: 233 SVISACAKAGALDLGKWVHAYIDRKGITVDLELSTALIDMYAKCGLIERARGVFDAMVEK 292
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++++I G A+HG +A+ +F M+ +RP VTF+GVL+AC+H GLV+ G +
Sbjct: 293 DTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVEDGRR-Y 351
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
S+ ++ GI+P +E+YGC+VDLL R G ++AY F+ M ++P+ ++ +LL ACK +
Sbjct: 352 WSIMQNLGIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSPNSVIWRTLLVACKSSNR 411
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+ + E KRLL+ + YVLLSN YAS+ +W +R KMK V G SSIE
Sbjct: 412 IDIAESATKRLLELEPHNPENYVLLSNLYASNSQWDRVSYLRRKMKGKNVTAIAGRSSIE 471
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+N +HEF++ D HP+ +I ++E+ V+ G+ P T VLHD+ + EKE AL H
Sbjct: 472 INGHLHEFVVSDDSHPEIREIRLVLREMADRVRRAGHKPWTAAVLHDVGEEEKEAALCQH 531
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLAI YGL+ T+ IRVVKNLR C DCH + K+I+ R+I+VRDR RFH F G
Sbjct: 532 SERLAIAYGLLKTRAPHVIRVVKNLRFCLDCHEVAKIISKAYNREIVVRDRVRFHKFMGG 591
Query: 481 TCSCGDYW 488
+CSC D+W
Sbjct: 592 SCSCKDFW 599
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 178/370 (48%), Gaps = 31/370 (8%)
Query: 72 VFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR-DNVRPNEVTIVCVLSACSQLG 130
+F ++ C+ ++I L G A AL ++R M R + RPN T+ L AC+ +
Sbjct: 82 LFDQIPDPTAFCYNSLIRALPAAGS-APALAVYRRMLRAGSPRPNSFTLAFALKACAAVP 140
Query: 131 ALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-ERDVTTYNSLI 189
A GR +H+ + + + V L+N+Y++C + A VF+ M ++++ +++++
Sbjct: 141 APGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMAGDKNLVAWSAMV 200
Query: 190 AGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGI 249
+G + G EA+ +FREM G+ P +VT V V++AC+ G +DLG + + R GI
Sbjct: 201 SGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRK-GI 259
Query: 250 EPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAK 309
+E ++D+ ++ G E A M + D +++ IHG ++ +
Sbjct: 260 TVDLELSTALIDMYAKCGLIERARGVFDAM-VEKDTKAWSAMIVGFAIHGLVEDALGLFS 318
Query: 310 RLLDCR-SADSGTYVLLSNAYASSG-------KWK--EAVQIRAKMKEAGVQKEPGCSSI 359
R+L+ + ++ T++ + +A A SG W + + I+ M+ G + C S
Sbjct: 319 RMLELKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIMQNLGIKPSMENYGCMVDLLCRS- 377
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKM--------------QELKQIVKLEGYSPSTEVVL 405
+ ++ + F++G P I++ + K++++LE ++P V+L
Sbjct: 378 GLLDDAYSFVIGMPVSPN-SVIWRTLLVACKSSNRIDIAESATKRLLELEPHNPENYVLL 436
Query: 406 HDIEDWEKEW 415
++ +W
Sbjct: 437 SNLYASNSQW 446
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/478 (43%), Positives = 294/478 (61%), Gaps = 38/478 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H + G SN L++LY KCGE
Sbjct: 226 GRQVHSWINDHGFGSNLKIVNALIDLYSKCGE---------------------------- 257
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
VE A E+ + KD + W +I G AL LF+EM R PN+VT++
Sbjct: 258 ----VETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLS 313
Query: 122 VLSACSQLGALELGRWIHSYMGKHR----IDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+L AC+ LGA+++GRWIH Y+ K + + +LI+MY++CGDID A QV +
Sbjct: 314 ILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSS 373
Query: 178 K-ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
R ++T+N++I G AMHGR+ A ++F M GI P +TFVG+L+ACSH G++DLG
Sbjct: 374 AFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLG 433
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
IF+SM +DY I P++EHYGC++DLL G +EA + I M + PD ++ SLL ACK
Sbjct: 434 RNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACK 493
Query: 297 IHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE-PG 355
IHG L+LGE AK+L+ + G+YVLLSN YA++GKW E +IR + + G++K+ PG
Sbjct: 494 IHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPG 553
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
CSSIE+++ +HEFI+GD HPQ +IY ++E++ +++ G+ P T VL ++E+ KE
Sbjct: 554 CSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEG 613
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNR 473
AL HSE+LAI +GLISTKP T + +VKNLRVC +CH KLI+ I KR+II RDR R
Sbjct: 614 ALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTR 671
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 181/349 (51%), Gaps = 39/349 (11%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG++IHG VLKLG + L+ +Y + G +DA ++FD DVV+ T +I Y
Sbjct: 93 EGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSH-RDVVSYTALITGY 151
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G +E+A ++F + +KD V W AMI G G +AL+LF+EM + NV+P+E T+
Sbjct: 152 ASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMA 211
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+SAC+Q G++ELGR +HS++ H N + ALI++YS+CG+++ A ++ E + +
Sbjct: 212 TVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNK 271
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++N+LI G EA+ +F+EM+ G P VT + +L AC+H G +D+G I
Sbjct: 272 DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH 331
Query: 241 QSMTR-------------------------DYGIEPQIEH----------YGCIVDLLSR 265
+ + D PQ+ + ++ +
Sbjct: 332 VYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAM 391
Query: 266 VGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
GR A+D + M+ I PD I LLSAC G L LG I + +
Sbjct: 392 HGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSM 440
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 111/242 (45%), Gaps = 32/242 (13%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A VF + + + W M G + + AL L+ M + PN T +L +C++
Sbjct: 28 AISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAK 87
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
+ G+ IH ++ K DL+ V +LI+MY++ G ++ A +VF+ RDV +Y +L
Sbjct: 88 SKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTAL 147
Query: 189 IAGLAMH-------------------------------GRSIEAVEMFREMINQGIRPTK 217
I G A G +A+E+F+EM+ ++P +
Sbjct: 148 ITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDE 207
Query: 218 VTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFIT 277
T V++AC+ G ++LG ++ S D+G ++ ++DL S+ G E A + +
Sbjct: 208 STMATVVSACAQSGSIELGRQV-HSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLE 266
Query: 278 NM 279
+
Sbjct: 267 GL 268
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/491 (41%), Positives = 301/491 (61%), Gaps = 15/491 (3%)
Query: 13 GLRSNRSTRLKLVELYGKCGEF--KDAMQLFDEMPECN-DVVASTVMINCYVEHGLVENA 69
GL +N +T +V + G F K+A+ F + D +++ Y G ++ A
Sbjct: 400 GLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIA 459
Query: 70 FEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ-----------RDNVRPNEVT 118
+F +++ +D V W MI G V + AL L +MQ R +++PN +T
Sbjct: 460 MRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSIT 519
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
++ +L +C+ L AL G+ IH+Y K+ + + VG AL++MY++CG + + +VF+++
Sbjct: 520 LMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 579
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
+++V T+N +I MHG EA+++ R M+ QG++P +VTF+ V ACSH G+VD G
Sbjct: 580 QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLR 639
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI-MLGSLLSACKI 297
IF M DYG+EP +HY C+VDLL R GR +EAY + M + SLL A +I
Sbjct: 640 IFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRI 699
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
H L++GE A+ L+ + YVLL+N Y+S+G W +A ++R MKE GV+KEPGCS
Sbjct: 700 HNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCS 759
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IE +E+H+F+ GD HPQ E++ ++ L + ++ EGY P T VLH++E+ EKE L
Sbjct: 760 WIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILL 819
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LAI +G+++T P T IRV KNLRVCNDCH K I+ I R+II+RD RFH F
Sbjct: 820 CGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRF 879
Query: 478 ENGTCSCGDYW 488
+NGTCSCGDYW
Sbjct: 880 KNGTCSCGDYW 890
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 119/242 (49%), Gaps = 37/242 (15%)
Query: 2 GREIHGQVLKLGLRSNRSTRLK-LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
G++IH V K G + T LV LY KCG+F
Sbjct: 116 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDF-------------------------- 149
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G V ++VF R+ ++ V W ++I L + AL+ FR M +NV P+ T+V
Sbjct: 150 ---GAV---YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLV 203
Query: 121 CVLSACSQLG---ALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
V++ACS L L +G+ +H+Y G + +LN + L+ MY + G + + +
Sbjct: 204 SVVTACSNLPMPEGLMMGKQVHAY-GLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSF 262
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
RD+ T+N++++ L + + +EA+E REM+ +G+ P + T VL ACSH ++ G
Sbjct: 263 GGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGK 322
Query: 238 EI 239
E+
Sbjct: 323 EL 324
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 121/242 (50%), Gaps = 14/242 (5%)
Query: 46 ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
E N + +T ++ Y + G + ++ + +D V W ++ L +N ++ AL+ R
Sbjct: 233 ELNSFIINT-LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLR 291
Query: 106 EMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKH-RIDLNHIVGGALINMYSRC 164
EM + V P+E TI VL ACS L L G+ +H+Y K+ +D N VG AL++MY C
Sbjct: 292 EMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNC 351
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM-INQGIRPTKVTFVGV 223
+ +VF+ M +R + +N++IAG + + EA+ +F M + G+ T GV
Sbjct: 352 KQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGV 411
Query: 224 LNACSHGGLVDL-----GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITN 278
+ AC G GF + + + RD ++ ++D+ SR+G+ + A
Sbjct: 412 VPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQ------NTLMDMYSRLGKIDIAMRIFGK 465
Query: 279 MK 280
M+
Sbjct: 466 ME 467
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 129/276 (46%), Gaps = 36/276 (13%)
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W ++ VR+ + A+ + +M ++P+ +L A + L +ELG+ IH+++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 144 KHRIDLNHI-VGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAV 202
K ++ + V L+N+Y +CGD +VF+ + ER+ ++NSLI+ L + A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 203 EMFREMINQGIRPTKVTFVGVLNACSH----GGLV-------------DLGFEIFQSMTR 245
E FR M+++ + P+ T V V+ ACS+ GL+ +L I ++
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVA 244
Query: 246 DYGIEPQIEHYGCIV------------DLLSRVGRPE---EAYDFITNM---KIAPDHIM 287
YG ++ ++ +LS + + E EA +++ M + PD
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT 304
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV 323
+ S+L AC L+ G+++ L S D ++V
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFV 340
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 125/265 (47%), Gaps = 46/265 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+EIH +K L ++ + LV++Y KCG + + ++FD++P+ N V+ V+I Y
Sbjct: 535 KGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKN-VITWNVIIMAY 593
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG NG+ A+DL R M V+PNEVT +
Sbjct: 594 GMHG-----------------------------NGQ--EAIDLLRMMMVQGVKPNEVTFI 622
Query: 121 CVLSACSQLGALELGRWIHSYMGK-HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V +ACS G ++ G I M + ++ + ++++ R G I +A Q+ M
Sbjct: 623 SVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLM-NMMP 681
Query: 180 RDVT---TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVT-FVGVLNACSHGGLVDL 235
RD ++SL+ +H ++E E+ + + Q + P + +V + N S GL D
Sbjct: 682 RDFNKAGAWSSLLGASRIH-NNLEIGEIAAQNLIQ-LEPNVASHYVLLANIYSSAGLWDK 739
Query: 236 GFEIFQSMTRDYGI--EP---QIEH 255
E+ ++M ++ G+ EP IEH
Sbjct: 740 ATEVRRNM-KEQGVRKEPGCSWIEH 763
>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
Length = 787
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/440 (44%), Positives = 282/440 (64%), Gaps = 1/440 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DVV +T +++ Y ++GL++ A VF + ++ V W+AMI G +NG+ AL LFR MQ
Sbjct: 243 DVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQ 302
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
++P+ +V L ACS +G L+LGR +H ++ + R D N I+G A I+MYS+CG +
Sbjct: 303 ASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVR-RFDFNCILGTAAIDMYSKCGSLA 361
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +F + +RD+ +N++IA HGR +A+ +F+EM G+RP TF +L+A S
Sbjct: 362 SAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALS 421
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLV+ G F M + I P +HY C+VDLL+R G EEA D +T+MK P +
Sbjct: 422 HSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIW 481
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+LLS C + KL+LGE IA +L+ + D G L+SN YA++ KW + Q+R MK++
Sbjct: 482 VALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDS 541
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
G +K PGCSSIE+ H F++ D HPQRE+I K+ +L ++ GY P TE V HD+
Sbjct: 542 GSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYHDL 601
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
E+ KE L+ HSERLAI +GL++T P T + ++KNLRVC DCH IK I+ I R+I+V
Sbjct: 602 EEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVV 661
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD RFHHF++G CSC DYW
Sbjct: 662 RDAKRFHHFKDGVCSCRDYW 681
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 157/296 (53%), Gaps = 14/296 (4%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+DV + +++ Y G + +A +VF R+ +D V W+ M+ G V G+ A+ ++R M
Sbjct: 141 DDVFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRM 200
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ D V+ +EV ++ V+ AC+ + +G +H ++ +H + ++ + +L++MY++ G +
Sbjct: 201 REDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLL 260
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
D A +VF M R+ +++++I+G A +G+S EA+ +FR M GI+P V L AC
Sbjct: 261 DVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLAC 320
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI-----VDLLSRVGRPEEAYDFITNMKIA 282
S+ G + LG + + R + + CI +D+ S+ G A + NM
Sbjct: 321 SNIGFLKLGRSVHGFIVRRF-------DFNCILGTAAIDMYSKCGSLASA-QMLFNMISD 372
Query: 283 PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC-RSADSGTYVLLSNAYASSGKWKE 337
D I+ ++++ C HG+ Q + + + + D T+ L +A + SG +E
Sbjct: 373 RDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEE 428
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 138/291 (47%), Gaps = 52/291 (17%)
Query: 93 RNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWI--HSYMGKHRIDLN 150
R G A AL +FR + RP+ T LSAC++LG L G + ++ ++ D+
Sbjct: 86 RRGSPASALRVFRALP-PAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDV- 143
Query: 151 HIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
V +L+++Y+R G + A++VF M RD T+++++AG G+ ++A++M+R M
Sbjct: 144 -FVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRE 202
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
G++ +V +GV+ AC+ V +G + + R +G+ + +VD+ ++
Sbjct: 203 DGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLR-HGMRMDVVTATSLVDMYAKN---- 257
Query: 271 EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYA 330
G L AC++ G + + ++ + + +A
Sbjct: 258 ------------------GLLDVACRVFGLMVHRNDV-------------SWSAMISGFA 286
Query: 331 SSGKWKEAVQIRAKMKEAGVQKEPG--------CSSI---EVNNEIHEFIL 370
+G+ EA+++ M+ +G+Q + G CS+I ++ +H FI+
Sbjct: 287 QNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIV 337
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/524 (39%), Positives = 297/524 (56%), Gaps = 41/524 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G++IHG K+GL S LV +YGKCG +A + DEM DVV+ ++ Y
Sbjct: 160 GKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSR-RDVVSWNSLVAGYA 218
Query: 62 EHGLVENAFEV-------------------------------------FSRVKVKDTVCW 84
++ ++A EV F ++ K V W
Sbjct: 219 QNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSW 278
Query: 85 TAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGK 144
MI ++N A++L+ M+ D P+ V+I VL AC AL LG+ IH Y+ +
Sbjct: 279 NVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIER 338
Query: 145 HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEM 204
++ N ++ ALI+MY++CG +D+A VFE MK RDV ++ ++I+ GR +AV +
Sbjct: 339 KKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVAL 398
Query: 205 FREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLS 264
F +M + G+ P + FV L ACSH GL++ G F+ MT Y I P++EH C+VDLL
Sbjct: 399 FSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLG 458
Query: 265 RVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVL 324
R G+ +EAY FI M + P+ + G+LL AC++H +G A +L SG YVL
Sbjct: 459 RAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVL 518
Query: 325 LSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKK 384
LSN YA +G+W+E IR MK G++K PG S++EVN IH F++GD HPQ +IY++
Sbjct: 519 LSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRE 578
Query: 385 MQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTK---PYTTIRV 441
+ L + +K GY P +E LHD+E+ +KE LA+HSE+LAI + L++T+ IR+
Sbjct: 579 LDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTEEEDSNNAIRI 638
Query: 442 VKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCG 485
KNLR+C DCH KLI+ IT R+II+RD NRFH F G CSC
Sbjct: 639 TKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCA 682
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 172/385 (44%), Gaps = 74/385 (19%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
R +H +++ LR N S +KL+ Y + A ++FDE+PE N ++IN
Sbjct: 60 RTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERN-----VIIINV--- 111
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
MI V NG + +F M +V+P+ T CV
Sbjct: 112 ------------------------MIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCV 147
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L ACS G + +G+ IH K + VG L++MY +CG + +A V +EM RDV
Sbjct: 148 LKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDV 207
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF--EIF 240
++NSL+AG A + R +A+E+ REM + I T +L A S+ ++ + ++F
Sbjct: 208 VSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMF 267
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSAC-- 295
M + + + ++ + + P EA + + M+ PD + + S+L AC
Sbjct: 268 FKMGKK-----SLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGD 322
Query: 296 --------KIHGKLQLGEQIAKRLL----------------------DCRSADSGTYVLL 325
KIHG ++ + I LL + +S D ++ +
Sbjct: 323 TSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAM 382
Query: 326 SNAYASSGKWKEAVQIRAKMKEAGV 350
+AY SG+ +AV + +KM+++G+
Sbjct: 383 ISAYGFSGRGCDAVALFSKMQDSGL 407
>gi|115440653|ref|NP_001044606.1| Os01g0814300 [Oryza sativa Japonica Group]
gi|20161481|dbj|BAB90405.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|56785052|dbj|BAD82691.1| PPR repeat containing protein-like [Oryza sativa Japonica Group]
gi|113534137|dbj|BAF06520.1| Os01g0814300 [Oryza sativa Japonica Group]
Length = 604
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/488 (41%), Positives = 295/488 (60%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR++H Q + GL + + L+ LY KC E A +FD M
Sbjct: 149 EGRQLHSQAFRRGLEPSPYVQTGLLNLYAKCEEVALARTVFDGM---------------- 192
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V K+ W+AMI G R G + AL LFREMQ +V P+EVT+V
Sbjct: 193 ---------------VGDKNLAAWSAMIGGYSRVGMVNEALGLFREMQAADVNPDEVTMV 237
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+SAC++ GAL+LGRW+H+++ + I ++ + ALI+MY++CG I++A VF+ M ER
Sbjct: 238 SVISACAKAGALDLGRWVHAFIDRKGITVDLELSTALIDMYAKCGLIERAKGVFDAMAER 297
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++++I GLA+HG A+++F M+ +RP VTF+GVL+AC+H GLV+ G +
Sbjct: 298 DTKAWSAMIVGLAIHGLVEVALKLFSRMLELKVRPNNVTFIGVLSACAHSGLVNEGRRYW 357
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+M ++ GI+P +E+YGC+VDL R +EAY F+T M I P+ ++ +LL A K +
Sbjct: 358 STM-QELGIKPSMENYGCMVDLFCRSSLLDEAYSFVTGMAIPPNSVIWRTLLVASKNSNR 416
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+ + +K+LL+ + YVLLSN YAS+ +W +R KMKE V GCSSIE
Sbjct: 417 FDIVQSASKKLLELEPCNPENYVLLSNLYASNSQWDRVSYMRKKMKENNVNVVAGCSSIE 476
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+N +H+F++ D HP+ ++I ++E+ V G+ P T VLHD+ + EKE AL H
Sbjct: 477 INGYLHKFVVSDDSHPEIKEIRLLLREIADRVVRAGHKPWTAAVLHDVGEEEKEVALCEH 536
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLAI YGL+ TK IRVVKNLR C DCH + K+++ R+IIVRDR RFH F G
Sbjct: 537 SERLAIAYGLLKTKAPHVIRVVKNLRFCPDCHEVAKIVSKSYDREIIVRDRVRFHRFVEG 596
Query: 481 TCSCGDYW 488
+CSC D+W
Sbjct: 597 SCSCKDFW 604
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 179/375 (47%), Gaps = 31/375 (8%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALD---LFREMQR-DNVRPNEVTIVCVLS 124
A +F ++ C+ ++I L A A D ++R M R + PN T+ L
Sbjct: 80 ARNLFDQIPEPTAFCYNSLIRALSSAAGAAPAADTVLVYRRMLRAGSPLPNSFTLAFALK 139
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM-KERDVT 183
ACS + AL GR +HS + ++ + V L+N+Y++C ++ A VF+ M ++++
Sbjct: 140 ACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLNLYAKCEEVALARTVFDGMVGDKNLA 199
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
++++I G + G EA+ +FREM + P +VT V V++AC+ G +DLG + +
Sbjct: 200 AWSAMIGGYSRVGMVNEALGLFREMQAADVNPDEVTMVSVISACAKAGALDLGRWVHAFI 259
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQL 303
R GI +E ++D+ ++ G E A M D +++ IHG +++
Sbjct: 260 DRK-GITVDLELSTALIDMYAKCGLIERAKGVFDAMA-ERDTKAWSAMIVGLAIHGLVEV 317
Query: 304 GEQIAKRLLDCR-SADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ---KEPGC--- 356
++ R+L+ + ++ T++ + +A A SG E + + M+E G++ + GC
Sbjct: 318 ALKLFSRMLELKVRPNNVTFIGVLSACAHSGLVNEGRRYWSTMQELGIKPSMENYGCMVD 377
Query: 357 --SSIEVNNEIHEFILGDIRHPQREQIYKKM--------------QELKQIVKLEGYSPS 400
+ +E + F+ G + P I++ + K++++LE +P
Sbjct: 378 LFCRSSLLDEAYSFVTG-MAIPPNSVIWRTLLVASKNSNRFDIVQSASKKLLELEPCNPE 436
Query: 401 TEVVLHDIEDWEKEW 415
V+L ++ +W
Sbjct: 437 NYVLLSNLYASNSQW 451
>gi|414880007|tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
Length = 648
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/488 (41%), Positives = 296/488 (60%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR++H Q L+ GL ++ + L+ LY KC + A +FD M
Sbjct: 193 EGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGM---------------- 236
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
K+ V W+AM+ G R G + AL LFREMQ V P+EVT+V
Sbjct: 237 ---------------AGDKNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGVEPDEVTMV 281
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+SAC++ GAL+LG+W+H+Y+ + I ++ + ALI+MY++CG I++A VF+ M E+
Sbjct: 282 SVISACAKAGALDLGKWVHAYIDRKGITVDLELSTALIDMYAKCGLIERARGVFDAMVEK 341
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++++I G A+HG +A+ +F M+ +RP VTF+GVL+AC+H GLV+ G +
Sbjct: 342 DTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVEDGRR-Y 400
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
S+ ++ GI+P +E+YGC+VDLL R G ++AY F+ M ++P+ ++ +LL ACK +
Sbjct: 401 WSIMQNLGIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSPNSVIWRTLLVACKSSNR 460
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+ + E KRLL+ + YVLLSN YAS+ +W +R KMK V G SSIE
Sbjct: 461 IDIAESATKRLLELEPHNPENYVLLSNLYASNSQWDRVSYLRRKMKGKNVTAIAGRSSIE 520
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+N +HEF++ D HP+ +I ++E+ V+ G+ P T VLHD+ + EKE AL H
Sbjct: 521 INGHLHEFVVSDDSHPEIREIRLVLREMADRVRRAGHKPWTAAVLHDVGEEEKEAALCQH 580
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLAI YGL+ T+ IRVVKNLR C DCH + K+I+ R+I+VRDR RFH F G
Sbjct: 581 SERLAIAYGLLKTRAPHVIRVVKNLRFCLDCHEVAKIISKAYNREIVVRDRVRFHKFMGG 640
Query: 481 TCSCGDYW 488
+CSC D+W
Sbjct: 641 SCSCKDFW 648
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 178/370 (48%), Gaps = 31/370 (8%)
Query: 72 VFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR-DNVRPNEVTIVCVLSACSQLG 130
+F ++ C+ ++I L G A AL ++R M R + RPN T+ L AC+ +
Sbjct: 131 LFDQIPDPTAFCYNSLIRALPAAGS-APALAVYRRMLRAGSPRPNSFTLAFALKACAAVP 189
Query: 131 ALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-ERDVTTYNSLI 189
A GR +H+ + + + V L+N+Y++C + A VF+ M ++++ +++++
Sbjct: 190 APGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMAGDKNLVAWSAMV 249
Query: 190 AGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGI 249
+G + G EA+ +FREM G+ P +VT V V++AC+ G +DLG + + R GI
Sbjct: 250 SGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRK-GI 308
Query: 250 EPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAK 309
+E ++D+ ++ G E A M + D +++ IHG ++ +
Sbjct: 309 TVDLELSTALIDMYAKCGLIERARGVFDAM-VEKDTKAWSAMIVGFAIHGLVEDALGLFS 367
Query: 310 RLLDCR-SADSGTYVLLSNAYASSG-------KWK--EAVQIRAKMKEAGVQKEPGCSSI 359
R+L+ + ++ T++ + +A A SG W + + I+ M+ G + C S
Sbjct: 368 RMLELKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIMQNLGIKPSMENYGCMVDLLCRS- 426
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKM--------------QELKQIVKLEGYSPSTEVVL 405
+ ++ + F++G P I++ + K++++LE ++P V+L
Sbjct: 427 GLLDDAYSFVIGMPVSPN-SVIWRTLLVACKSSNRIDIAESATKRLLELEPHNPENYVLL 485
Query: 406 HDIEDWEKEW 415
++ +W
Sbjct: 486 SNLYASNSQW 495
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1005
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/494 (38%), Positives = 304/494 (61%), Gaps = 11/494 (2%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDA-------MQLFDEMPECNDVVAST 54
G I Q+L G N T + + C D Q+ + ND V T
Sbjct: 516 GLRIFNQMLAEGFNPNMYT---FISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVG-T 571
Query: 55 VMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP 114
+++ Y ++ +E+A +F+R+ +D WT ++ G ++G+ +A+ F +MQR+ V+P
Sbjct: 572 ALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKP 631
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
NE T+ LS CS++ L+ GR +HS K + V AL++MY++CG ++ A VF
Sbjct: 632 NEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVF 691
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
+ + RD ++N++I G + HG+ +A++ F M+++G P +VTF+GVL+ACSH GL++
Sbjct: 692 DGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIE 751
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
G + F S+++ YGI P IEHY C+VD+L R G+ E FI MK+ + ++ ++L A
Sbjct: 752 EGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGA 811
Query: 295 CKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
CK+HG ++ GE+ A +L + Y+LLSN +A+ G W + +RA M GV+KEP
Sbjct: 812 CKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEP 871
Query: 355 GCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKE 414
GCS +EVN ++H F+ D HP+ +I+ K+Q+L Q + GY+P+T+ VLH++ D EK+
Sbjct: 872 GCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQ 931
Query: 415 WALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRF 474
L HSERLA+ + L+ST TIR+ KNLR+C DCH +K I+ IT ++++VRD N F
Sbjct: 932 ELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRDINCF 991
Query: 475 HHFENGTCSCGDYW 488
HHF+NG+CSC ++W
Sbjct: 992 HHFKNGSCSCQNFW 1005
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 147/341 (43%), Gaps = 67/341 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+ IHGQV+K G+ + LV +Y KCG
Sbjct: 146 EGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGS--------------------------- 178
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
A +VF + +D V WTA+I G V G + A++LF EM+R+ V NE T
Sbjct: 179 -----ANYACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYA 233
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
L ACS LE G+ +H+ K + VG AL+++Y++CG++ A +VF M ++
Sbjct: 234 TALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQ 293
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+ ++N+L+ G A G + + + +F M I +K T VL C++ G + G +I
Sbjct: 294 NAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAG-QIV 352
Query: 241 QSMTRDYGIE-------------------------------PQIEHYGCIVDLLSRVGRP 269
S+ G E P + + I+ L + G+
Sbjct: 353 HSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQS 412
Query: 270 EEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQI 307
EA + M+ + P+ L SL+SA G L GE I
Sbjct: 413 REAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESI 453
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 150/324 (46%), Gaps = 34/324 (10%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D S +++ Y + GL +A +VF R++ D V W+A+I L + G+ A ++F+ M+
Sbjct: 364 DEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMR 423
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
V PN+ T+ ++SA + LG L G IH+ + K+ + ++ V AL+ MY + G +
Sbjct: 424 HSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQ 483
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+VFE RD+ ++N+L++G + + +F +M+ +G P TF+ +L +CS
Sbjct: 484 DGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCS 543
Query: 229 HGGLVDLGFEIFQSMTRD---------------YG---------------IEPQIEHYGC 258
VDLG ++ + ++ Y I+ + +
Sbjct: 544 SLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTV 603
Query: 259 IVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC- 314
IV ++ G+ E+A M+ + P+ L S LS C L G Q+ +
Sbjct: 604 IVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAG 663
Query: 315 RSADSGTYVLLSNAYASSGKWKEA 338
+S D L + YA G ++A
Sbjct: 664 QSGDMFVASALVDMYAKCGCVEDA 687
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 129/252 (51%), Gaps = 2/252 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D ++ Y++ G V++ VF +D + W A++ G N L +F +M
Sbjct: 465 DNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQML 524
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ PN T + +L +CS L ++LG+ +H+ + K+ +D N VG AL++MY++ ++
Sbjct: 525 AEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLE 584
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +F + +RD+ + ++AG A G+ +AV+ F +M +G++P + T L+ CS
Sbjct: 585 DAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCS 644
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
+D G ++ SM G + +VD+ ++ G E+A + + + ++ D +
Sbjct: 645 RIATLDSGRQL-HSMAIKAGQSGDMFVASALVDMYAKCGCVEDA-EVVFDGLVSRDTVSW 702
Query: 289 GSLLSACKIHGK 300
+++ HG+
Sbjct: 703 NTIICGYSQHGQ 714
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 148/314 (47%), Gaps = 40/314 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H + +K+G S+ LV+LY KCGE A ++F MP+
Sbjct: 248 GKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPK--------------- 292
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ V W A+++G + G+ + L+LF M + ++ T+
Sbjct: 293 -----------------QNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLST 335
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL C+ G L G+ +HS + +L+ + L++MYS+CG AL+VF +++ D
Sbjct: 336 VLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPD 395
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +++++I L G+S EA E+F+ M + G+ P + T +++A + G + G I
Sbjct: 396 VVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHA 455
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIH 298
+ + YG E +V + ++G ++ ++ TN D I +LLS +
Sbjct: 456 CVCK-YGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNR----DLISWNALLSGFHDN 510
Query: 299 GKLQLGEQIAKRLL 312
G +I ++L
Sbjct: 511 ETCDTGLRIFNQML 524
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L C+ G L G+ IH + K I+ + + +L+N+Y++CG + A +VF E+ ERD
Sbjct: 134 MLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERD 193
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
V ++ +LI G G AV +F EM +G+ + T+ L ACS
Sbjct: 194 VVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACS 240
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/487 (40%), Positives = 291/487 (59%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +++ +KLG+ S L+ +Y + G +DA + FD + E
Sbjct: 373 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFE--------------- 417
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K+ V + A++DG +N + A LF E+ + + T
Sbjct: 418 -----------------KNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFAS 460
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+LS + +GA+ G IH + K N + ALI+MYSRCG+I+ A QVF EM++R+
Sbjct: 461 LLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRN 520
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ S+I G A HG + A+EMF +M+ G +P ++T+V VL+ACSH G++ G + F
Sbjct: 521 VISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFN 580
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM +++GI P++EHY C+VDLL R G EA +FI +M + D ++ +LL AC++HG
Sbjct: 581 SMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNT 640
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LG A+ +L+ D Y+LLSN +AS+G+WK+ V+IR MKE + KE GCS IEV
Sbjct: 641 ELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEV 700
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N +H F +G+ HPQ QIY+++ +L +K GY P T+ VLHDIE+ +KE L HS
Sbjct: 701 ENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHS 760
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E++A+ +GLIST IR+ KNLRVC DCH+ IK I+ T R+I+VRD NRFHH +NG
Sbjct: 761 EKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGV 820
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 821 CSCNDYW 827
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 164/344 (47%), Gaps = 45/344 (13%)
Query: 49 DVVASTVMINCYVE-HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
DV +I+ +V+ G + +A++VF ++ ++ V WT MI + G A+DLF +M
Sbjct: 181 DVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDM 240
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC--- 164
+ P+ T VLSAC++LG L LG+ +HS + + + L+ VG +L++MY++C
Sbjct: 241 ELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAAD 300
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR-SIEAVEMFREMINQGIRPTKVTFVGV 223
G +D + +VFE+M E +V ++ ++I G EA+E+F +MI+ IRP +F V
Sbjct: 301 GSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSV 360
Query: 224 LNACSHGGLVD--LGFEIFQSMTR------------------------------DYGIEP 251
L AC G L D G +++ + D E
Sbjct: 361 LKAC--GNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEK 418
Query: 252 QIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIA 308
+ Y IVD ++ + EEA ++ I + I SLLS G + GEQI
Sbjct: 419 NLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIH 478
Query: 309 KRLLD--CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
RLL +S L+S Y+ G + A Q+ +M++ V
Sbjct: 479 GRLLKGGYKSNQCICNALIS-MYSRCGNIEAAFQVFNEMEDRNV 521
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 170/355 (47%), Gaps = 40/355 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKC---GEFKDAMQLFDEMPECNDVVASTVMIN 58
G+++H +V++LGL + LV++Y KC G D+ ++F++MPE N
Sbjct: 268 GKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHN---------- 317
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMAR-ALDLFREMQRDNVRPNEV 117
+ WTA+I V++GE + A++LF +M ++RPN
Sbjct: 318 ----------------------VMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHF 355
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+ VL AC L G ++SY K I + VG +LI+MY+R G ++ A + F+ +
Sbjct: 356 SFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDIL 415
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
E+++ +YN+++ G A + +S EA +F E+ + GI + TF +L+ + G + G
Sbjct: 416 FEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGE 475
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
+I + + G + ++ + SR G E A+ M+ + I S+++
Sbjct: 476 QIHGRLLKG-GYKSNQCICNALISMYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAK 533
Query: 298 HGKLQLGEQIAKRLLDCRS-ADSGTYVLLSNAYASSGKWKEAVQ-IRAKMKEAGV 350
HG ++ ++L+ + + TYV + +A + G E + + KE G+
Sbjct: 534 HGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGI 588
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 120/254 (47%), Gaps = 36/254 (14%)
Query: 95 GEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG 154
G + A M + N P+ T +L +C + +LG+ +H + + ++L+ +V
Sbjct: 23 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 82
Query: 155 GALINMYSRCGDIDKALQVFEEM-KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGI 213
LI++YS+CGD + A +FE M +RD+ +++++++ A + +A+ F +M+ G
Sbjct: 83 NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 142
Query: 214 RPTKVTFVGVLNACS-----------HGGLVDLGF------------EIFQSMTRDYG-- 248
P + F V+ ACS +G +V G+ ++F + D G
Sbjct: 143 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 202
Query: 249 -------IEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIA---PDHIMLGSLLSACKIH 298
E + + ++ +++G +A D +M+++ PD S+LSAC
Sbjct: 203 YKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTEL 262
Query: 299 GKLQLGEQIAKRLL 312
G L LG+Q+ R++
Sbjct: 263 GLLALGKQLHSRVI 276
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 34/200 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G +IHG++LK G +SN+ L+ +Y +CG + A Q+F+EM + N V++ T MI +
Sbjct: 473 KGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRN-VISWTSMITGF 531
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+HG RAL++F +M +PNE+T V
Sbjct: 532 AKHGFA-------------------------------TRALEMFHKMLETGTKPNEITYV 560
Query: 121 CVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
VLSACS +G + G + +S +H I ++++ R G + +A++ M
Sbjct: 561 AVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPL 620
Query: 179 ERDVTTYNSLIAGLAMHGRS 198
D + +L+ +HG +
Sbjct: 621 MADALVWRTLLGACRVHGNT 640
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/491 (41%), Positives = 301/491 (61%), Gaps = 15/491 (3%)
Query: 13 GLRSNRSTRLKLVELYGKCGEF--KDAMQLFDEMPECN-DVVASTVMINCYVEHGLVENA 69
GL +N +T +V + G F K+A+ F + D +++ Y G ++ A
Sbjct: 313 GLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIA 372
Query: 70 FEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ-----------RDNVRPNEVT 118
+F +++ +D V W MI G V + AL L +MQ R +++PN +T
Sbjct: 373 MRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSIT 432
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
++ +L +C+ L AL G+ IH+Y K+ + + VG AL++MY++CG + + +VF+++
Sbjct: 433 LMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 492
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
+++V T+N +I MHG EA+++ R M+ QG++P +VTF+ V ACSH G+VD G
Sbjct: 493 QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLR 552
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI-MLGSLLSACKI 297
IF M DYG+EP +HY C+VDLL R GR +EAY + M + SLL A +I
Sbjct: 553 IFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRI 612
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
H L++GE A+ L+ + YVLL+N Y+S+G W +A ++R MKE GV+KEPGCS
Sbjct: 613 HNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCS 672
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IE +E+H+F+ GD HPQ E++ ++ L + ++ EGY P T VLH++E+ EKE L
Sbjct: 673 WIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILL 732
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LAI +G+++T P T IRV KNLRVCNDCH K I+ I R+II+RD RFH F
Sbjct: 733 CGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRF 792
Query: 478 ENGTCSCGDYW 488
+NGTCSCGDYW
Sbjct: 793 KNGTCSCGDYW 803
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 119/242 (49%), Gaps = 37/242 (15%)
Query: 2 GREIHGQVLKLGLRSNRSTRLK-LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
G++IH V K G + T LV LY KCG+F
Sbjct: 29 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDF-------------------------- 62
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G V ++VF R+ ++ V W ++I L + AL+ FR M +NV P+ T+V
Sbjct: 63 ---GAV---YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLV 116
Query: 121 CVLSACSQLG---ALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
V++ACS L L +G+ +H+Y G + +LN + L+ MY + G + + +
Sbjct: 117 SVVTACSNLPMPEGLMMGKQVHAY-GLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSF 175
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
RD+ T+N++++ L + + +EA+E REM+ +G+ P + T VL ACSH ++ G
Sbjct: 176 GGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGK 235
Query: 238 EI 239
E+
Sbjct: 236 EL 237
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 121/242 (50%), Gaps = 14/242 (5%)
Query: 46 ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
E N + +T ++ Y + G + ++ + +D V W ++ L +N ++ AL+ R
Sbjct: 146 ELNSFIINT-LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLR 204
Query: 106 EMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKH-RIDLNHIVGGALINMYSRC 164
EM + V P+E TI VL ACS L L G+ +H+Y K+ +D N VG AL++MY C
Sbjct: 205 EMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNC 264
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM-INQGIRPTKVTFVGV 223
+ +VF+ M +R + +N++IAG + + EA+ +F M + G+ T GV
Sbjct: 265 KQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGV 324
Query: 224 LNACSHGGLVDL-----GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITN 278
+ AC G GF + + + RD ++ ++D+ SR+G+ + A
Sbjct: 325 VPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQ------NTLMDMYSRLGKIDIAMRIFGK 378
Query: 279 MK 280
M+
Sbjct: 379 ME 380
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 117/248 (47%), Gaps = 36/248 (14%)
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHI-VGGALINMYSRCGDIDKA 170
++P+ +L A + L +ELG+ IH+++ K ++ + V L+N+Y +CGD
Sbjct: 6 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 65
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH- 229
+VF+ + ER+ ++NSLI+ L + A+E FR M+++ + P+ T V V+ ACS+
Sbjct: 66 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 125
Query: 230 ---GGLV-------------DLGFEIFQSMTRDYGIEPQIEHYGCIV------------D 261
GL+ +L I ++ YG ++ ++
Sbjct: 126 PMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNT 185
Query: 262 LLSRVGRPE---EAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR 315
+LS + + E EA +++ M + PD + S+L AC L+ G+++ L
Sbjct: 186 VLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 245
Query: 316 SADSGTYV 323
S D ++V
Sbjct: 246 SLDENSFV 253
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 125/265 (47%), Gaps = 46/265 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+EIH +K L ++ + LV++Y KCG + + ++FD++P+ N V+ V+I Y
Sbjct: 448 KGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKN-VITWNVIIMAY 506
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG NG+ A+DL R M V+PNEVT +
Sbjct: 507 GMHG-----------------------------NGQ--EAIDLLRMMMVQGVKPNEVTFI 535
Query: 121 CVLSACSQLGALELGRWIHSYMGK-HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V +ACS G ++ G I M + ++ + ++++ R G I +A Q+ M
Sbjct: 536 SVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLM-NMMP 594
Query: 180 RDVT---TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVT-FVGVLNACSHGGLVDL 235
RD ++SL+ +H ++E E+ + + Q + P + +V + N S GL D
Sbjct: 595 RDFNKAGAWSSLLGASRIH-NNLEIGEIAAQNLIQ-LEPNVASHYVLLANIYSSAGLWDK 652
Query: 236 GFEIFQSMTRDYGI--EP---QIEH 255
E+ ++M ++ G+ EP IEH
Sbjct: 653 ATEVRRNM-KEQGVRKEPGCSWIEH 676
>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g01510, mitochondrial; Flags: Precursor
gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 584
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/491 (42%), Positives = 315/491 (64%), Gaps = 9/491 (1%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPE----CNDVVASTVMINCY 60
++ ++ LG+R + T +V+ + G+F L + + C +VA T ++ Y
Sbjct: 96 LYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA-TELVMMY 154
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++ G + +A +F ++VKD V W A + V+ G A AL+ F +M D V+ + T+V
Sbjct: 155 MKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVV 214
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+LSAC QLG+LE+G I+ K ID N IV A ++M+ +CG+ + A +FEEMK+R
Sbjct: 215 SMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQR 274
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+V +++++I G AM+G S EA+ +F M N+G+RP VTF+GVL+ACSH GLV+ G F
Sbjct: 275 NVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYF 334
Query: 241 QSM--TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
M + D +EP+ EHY C+VDLL R G EEAY+FI M + PD + G+LL AC +H
Sbjct: 335 SLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVH 394
Query: 299 GKLQLGEQIAKRLLDCRSADSGTY-VLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
+ LG+++A L++ + D G+Y VLLSN YA++GKW ++R+KM++ G +K S
Sbjct: 395 RDMILGQKVADVLVET-APDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYS 453
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
S+E +IH F GD HPQ + IY+K+ E+ + ++ GY P T V HD+E EKE +L
Sbjct: 454 SVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSL 513
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
+ HSE+LAI +GLI +P IRV+KNLR C+DCH+ K ++++T +II+RD+NRFHHF
Sbjct: 514 SHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHF 573
Query: 478 ENGTCSCGDYW 488
NG CSC ++W
Sbjct: 574 RNGVCSCKEFW 584
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 122/278 (43%), Gaps = 33/278 (11%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
++IH VL+ G S +L+E G+ A Q+FDEM +
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHK---------------- 71
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
R+ W + G VRN +L L+++M+ VRP+E T V
Sbjct: 72 -----------PRI-----FLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFV 115
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
+ A SQLG G +H+++ K+ IV L+ MY + G++ A +FE M+ +D+
Sbjct: 116 VKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDL 175
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
+N+ +A G S A+E F +M ++ T V +L+AC G +++G EI+
Sbjct: 176 VAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDR 235
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
R I+ I +D+ + G E A MK
Sbjct: 236 -ARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMK 272
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 85/198 (42%), Gaps = 36/198 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G EI+ + K + N ++++ KCG + A LF+EM +
Sbjct: 229 GEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQ--------------- 273
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ V W+ MI G NG+ AL LF MQ + +RPN VT +
Sbjct: 274 -----------------RNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLG 316
Query: 122 VLSACSQLGALELGRWIHSYM---GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
VLSACS G + G+ S M ++ ++++ R G +++A + ++M
Sbjct: 317 VLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMP 376
Query: 179 -ERDVTTYNSLIAGLAMH 195
E D + +L+ A+H
Sbjct: 377 VEPDTGIWGALLGACAVH 394
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 19/193 (9%)
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL 224
GD+ A QVF+EM + + +N+L G + E++ ++++M + G+RP + T+ V+
Sbjct: 57 GDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVV 116
Query: 225 NACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGC-------IVDLLSRVGRPEEAYDFIT 277
A S G GF + + + YG +GC +V + + G A
Sbjct: 117 KAISQLGDFSCGFALHAHVVK-YG-------FGCLGIVATELVMMYMKFGELSSAEFLFE 168
Query: 278 NMKIAPDHIMLGSLLSACKIHGKLQLG-EQIAKRLLDCRSADSGTYVLLSNAYASSGKWK 336
+M++ D + + L+ C G + E K D DS T V + +A G +
Sbjct: 169 SMQV-KDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLE 227
Query: 337 --EAVQIRAKMKE 347
E + RA+ +E
Sbjct: 228 IGEEIYDRARKEE 240
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/487 (40%), Positives = 291/487 (59%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +++ +KLG+ S L+ +Y + G +DA + FD + E
Sbjct: 175 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFE--------------- 219
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K+ V + A++DG +N + A LF E+ + + T
Sbjct: 220 -----------------KNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFAS 262
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+LS + +GA+ G IH + K N + ALI+MYSRCG+I+ A QVF EM++R+
Sbjct: 263 LLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRN 322
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ S+I G A HG + A+EMF +M+ G +P ++T+V VL+ACSH G++ G + F
Sbjct: 323 VISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFN 382
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM +++GI P++EHY C+VDLL R G EA +FI +M + D ++ +LL AC++HG
Sbjct: 383 SMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNT 442
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LG A+ +L+ D Y+LLSN +AS+G+WK+ V+IR MKE + KE GCS IEV
Sbjct: 443 ELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEV 502
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N +H F +G+ HPQ QIY+++ +L +K GY P T+ VLHDIE+ +KE L HS
Sbjct: 503 ENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHS 562
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E++A+ +GLIST IR+ KNLRVC DCH+ IK I+ T R+I+VRD NRFHH +NG
Sbjct: 563 EKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGV 622
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 623 CSCNDYW 629
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 154/323 (47%), Gaps = 44/323 (13%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A++VF ++ ++ V WT MI + G A+DLF +M+ P+ T VLSAC++
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC---GDIDKALQVFEEMKERDVTTY 185
LG L LG+ +HS + + + L+ VG +L++MY++C G +D + +VFE+M E +V ++
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 186 NSLIAGLAMHGR-SIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD--LGFEIFQS 242
++I A G EA+E+F +MI+ IRP +F VL AC G L D G +++
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKAC--GNLSDPYTGEQVYSY 181
Query: 243 MTR------------------------------DYGIEPQIEHYGCIVDLLSRVGRPEEA 272
+ D E + Y IVD ++ + EEA
Sbjct: 182 AVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 241
Query: 273 ---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD--CRSADSGTYVLLSN 327
++ I + I SLLS G + GEQI RLL +S L+S
Sbjct: 242 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALIS- 300
Query: 328 AYASSGKWKEAVQIRAKMKEAGV 350
Y+ G + A Q+ +M++ V
Sbjct: 301 MYSRCGNIEAAFQVFNEMEDRNV 323
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 169/355 (47%), Gaps = 40/355 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKC---GEFKDAMQLFDEMPECNDVVASTVMIN 58
G+++H +V++LGL + LV++Y KC G D+ ++F++MPE N
Sbjct: 70 GKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHN---------- 119
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMAR-ALDLFREMQRDNVRPNEV 117
+ WTA+I ++GE + A++LF +M ++RPN
Sbjct: 120 ----------------------VMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHF 157
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+ VL AC L G ++SY K I + VG +LI+MY+R G ++ A + F+ +
Sbjct: 158 SFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDIL 217
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
E+++ +YN+++ G A + +S EA +F E+ + GI + TF +L+ + G + G
Sbjct: 218 FEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGE 277
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
+I + + G + ++ + SR G E A+ M+ + I S+++
Sbjct: 278 QIHGRLLKG-GYKSNQCICNALISMYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAK 335
Query: 298 HGKLQLGEQIAKRLLDCRS-ADSGTYVLLSNAYASSGKWKEAVQ-IRAKMKEAGV 350
HG ++ ++L+ + + TYV + +A + G E + + KE G+
Sbjct: 336 HGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGI 390
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 34/200 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G +IHG++LK G +SN+ L+ +Y +CG + A Q+F+EM + N V++ T MI +
Sbjct: 275 KGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRN-VISWTSMITGF 333
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+HG RAL++F +M +PNE+T V
Sbjct: 334 AKHGFA-------------------------------TRALEMFHKMLETGTKPNEITYV 362
Query: 121 CVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
VLSACS +G + G + +S +H I ++++ R G + +A++ M
Sbjct: 363 AVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPL 422
Query: 179 ERDVTTYNSLIAGLAMHGRS 198
D + +L+ +HG +
Sbjct: 423 MADALVWRTLLGACRVHGNT 442
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/487 (40%), Positives = 291/487 (59%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +++ +KLG+ S L+ +Y + G +DA + FD + E
Sbjct: 355 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFE--------------- 399
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K+ V + A++DG +N + A LF E+ + + T
Sbjct: 400 -----------------KNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFAS 442
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+LS + +GA+ G IH + K N + ALI+MYSRCG+I+ A QVF EM++R+
Sbjct: 443 LLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRN 502
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ S+I G A HG + A+EMF +M+ G +P ++T+V VL+ACSH G++ G + F
Sbjct: 503 VISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFN 562
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM +++GI P++EHY C+VDLL R G EA +FI +M + D ++ +LL AC++HG
Sbjct: 563 SMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNT 622
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LG A+ +L+ D Y+LLSN +AS+G+WK+ V+IR MKE + KE GCS IEV
Sbjct: 623 ELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEV 682
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N +H F +G+ HPQ QIY+++ +L +K GY P T+ VLHDIE+ +KE L HS
Sbjct: 683 ENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHS 742
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E++A+ +GLIST IR+ KNLRVC DCH+ IK I+ T R+I+VRD NRFHH +NG
Sbjct: 743 EKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGV 802
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 803 CSCNDYW 809
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 164/344 (47%), Gaps = 45/344 (13%)
Query: 49 DVVASTVMINCYVE-HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
DV +I+ +V+ G + +A++VF ++ ++ V WT MI + G A+DLF +M
Sbjct: 163 DVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDM 222
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC--- 164
+ P+ T VLSAC++LG L LG+ +HS + + + L+ VG +L++MY++C
Sbjct: 223 ELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAAD 282
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR-SIEAVEMFREMINQGIRPTKVTFVGV 223
G +D + +VFE+M E +V ++ ++I G EA+E+F +MI+ IRP +F V
Sbjct: 283 GSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSV 342
Query: 224 LNACSHGGLVD--LGFEIFQSMTR------------------------------DYGIEP 251
L AC G L D G +++ + D E
Sbjct: 343 LKAC--GNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEK 400
Query: 252 QIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIA 308
+ Y IVD ++ + EEA ++ I + I SLLS G + GEQI
Sbjct: 401 NLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIH 460
Query: 309 KRLLD--CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
RLL +S L+S Y+ G + A Q+ +M++ V
Sbjct: 461 GRLLKGGYKSNQCICNALIS-MYSRCGNIEAAFQVFNEMEDRNV 503
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 170/355 (47%), Gaps = 40/355 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKC---GEFKDAMQLFDEMPECNDVVASTVMIN 58
G+++H +V++LGL + LV++Y KC G D+ ++F++MPE N
Sbjct: 250 GKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHN---------- 299
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMAR-ALDLFREMQRDNVRPNEV 117
+ WTA+I V++GE + A++LF +M ++RPN
Sbjct: 300 ----------------------VMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHF 337
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+ VL AC L G ++SY K I + VG +LI+MY+R G ++ A + F+ +
Sbjct: 338 SFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDIL 397
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
E+++ +YN+++ G A + +S EA +F E+ + GI + TF +L+ + G + G
Sbjct: 398 FEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGE 457
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
+I + + G + ++ + SR G E A+ M+ + I S+++
Sbjct: 458 QIHGRLLKG-GYKSNQCICNALISMYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAK 515
Query: 298 HGKLQLGEQIAKRLLDCRS-ADSGTYVLLSNAYASSGKWKEAVQ-IRAKMKEAGV 350
HG ++ ++L+ + + TYV + +A + G E + + KE G+
Sbjct: 516 HGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGI 570
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 120/254 (47%), Gaps = 36/254 (14%)
Query: 95 GEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG 154
G + A M + N P+ T +L +C + +LG+ +H + + ++L+ +V
Sbjct: 5 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 64
Query: 155 GALINMYSRCGDIDKALQVFEEM-KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGI 213
LI++YS+CGD + A +FE M +RD+ +++++++ A + +A+ F +M+ G
Sbjct: 65 NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 124
Query: 214 RPTKVTFVGVLNACS-----------HGGLVDLGF------------EIFQSMTRDYG-- 248
P + F V+ ACS +G +V G+ ++F + D G
Sbjct: 125 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 184
Query: 249 -------IEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIA---PDHIMLGSLLSACKIH 298
E + + ++ +++G +A D +M+++ PD S+LSAC
Sbjct: 185 YKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTEL 244
Query: 299 GKLQLGEQIAKRLL 312
G L LG+Q+ R++
Sbjct: 245 GLLALGKQLHSRVI 258
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 34/200 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G +IHG++LK G +SN+ L+ +Y +CG + A Q+F+EM + N V++ T MI +
Sbjct: 455 KGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRN-VISWTSMITGF 513
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+HG RAL++F +M +PNE+T V
Sbjct: 514 AKHGFA-------------------------------TRALEMFHKMLETGTKPNEITYV 542
Query: 121 CVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
VLSACS +G + G + +S +H I ++++ R G + +A++ M
Sbjct: 543 AVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPL 602
Query: 179 ERDVTTYNSLIAGLAMHGRS 198
D + +L+ +HG +
Sbjct: 603 MADALVWRTLLGACRVHGNT 622
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/491 (40%), Positives = 310/491 (63%), Gaps = 9/491 (1%)
Query: 6 HGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQ-------LFDEMPECNDVVASTVMIN 58
HG +K+ L + L LV L + +D + DVV +++
Sbjct: 402 HGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVD 461
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR-DNVRPNEV 117
Y + GL+++A +VF + VKD + W +I G +NG + A+++++ M+ + PN+
Sbjct: 462 MYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQG 521
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T V +L A + +GAL+ G IH + K + L+ V LI++Y +CG + A+ +F ++
Sbjct: 522 TWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQV 581
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
+ T+N++I+ +HG + + +++F EM+++G++P VTFV +L+ACSH G V+ G
Sbjct: 582 PQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGK 641
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F+ M ++YGI+P ++HYGC+VDLL R G E AYDFI +M + PD + G+LL AC+I
Sbjct: 642 WCFRLM-QEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRI 700
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
HG ++LG+ + RL + S + G YVLLSN YA+ GKW+ ++R+ +E G++K PG S
Sbjct: 701 HGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWS 760
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
+IEVN ++ F G+ HP+ ++IY++++ L +K GY P VL D+E+ EKE L
Sbjct: 761 TIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHIL 820
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSERLAI +G+IST P + IR+ KNLRVC DCH+ K I+ IT+R+I+VRD NRFHHF
Sbjct: 821 TSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHF 880
Query: 478 ENGTCSCGDYW 488
++G CSCGDYW
Sbjct: 881 KDGICSCGDYW 891
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 162/347 (46%), Gaps = 35/347 (10%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR+IH KLG + N L+ +Y + G A LFD+MP
Sbjct: 233 DGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMP--------------- 277
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+D W AMI GL++NG A+ALD+ EM+ + ++ N VT+V
Sbjct: 278 -----------------FRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVV 320
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L C QLG + IH Y+ KH ++ + V ALINMY++ G+++ A + F++M
Sbjct: 321 SILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFIT 380
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++NS+IA + + A F +M G +P +T V + + + +
Sbjct: 381 DVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVH 440
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ R + + +VD+ +++G + A+ + + D I +L++ +G
Sbjct: 441 GFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVK-DVISWNTLITGYAQNGL 499
Query: 301 LQLGEQIAKRLLDCRS--ADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
++ K + +C+ + GT+V + AYA G ++ ++I ++
Sbjct: 500 ASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRV 546
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 123/250 (49%), Gaps = 6/250 (2%)
Query: 46 ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
+ + ST ++N Y G V + F ++ KD W +MI V NG A+ F
Sbjct: 147 KVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFY 206
Query: 106 EMQR-DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC 164
++ +RP+ T VL AC G L GR IH + K N V +LI+MYSR
Sbjct: 207 QLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRF 263
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL 224
G A +F++M RD+ ++N++I+GL +G + +A+++ EM +GI+ VT V +L
Sbjct: 264 GFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSIL 323
Query: 225 NACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPD 284
C G + I + + +G+E + ++++ ++ G E+A M I D
Sbjct: 324 PVCPQLGDISTAMLIHLYVIK-HGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFIT-D 381
Query: 285 HIMLGSLLSA 294
+ S+++A
Sbjct: 382 VVSWNSIIAA 391
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 33/197 (16%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G +IHG+V+K L + L+++YGKCG DAM LF ++P+ + V + + I+C+
Sbjct: 538 QGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAI-ISCH 596
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG E + L LF EM + V+P+ VT V
Sbjct: 597 GIHGHAE-------------------------------KTLKLFGEMLDEGVKPDHVTFV 625
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
+LSACS G +E G+W M ++ I + G ++++ R G ++ A ++M +
Sbjct: 626 SLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQ 685
Query: 180 RDVTTYNSLIAGLAMHG 196
D + + +L+ +HG
Sbjct: 686 PDASIWGALLGACRIHG 702
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/487 (40%), Positives = 291/487 (59%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +++ +KLG+ S L+ +Y + G +DA + FD + E
Sbjct: 180 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFE--------------- 224
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K+ V + A++DG +N + A LF E+ + + T
Sbjct: 225 -----------------KNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFAS 267
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+LS + +GA+ G IH + K N + ALI+MYSRCG+I+ A QVF EM++R+
Sbjct: 268 LLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRN 327
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ S+I G A HG + A+EMF +M+ G +P ++T+V VL+ACSH G++ G + F
Sbjct: 328 VISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFN 387
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM +++GI P++EHY C+VDLL R G EA +FI +M + D ++ +LL AC++HG
Sbjct: 388 SMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNT 447
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LG A+ +L+ D Y+LLSN +AS+G+WK+ V+IR MKE + KE GCS IEV
Sbjct: 448 ELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEV 507
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N +H F +G+ HPQ QIY+++ +L +K GY P T+ VLHDIE+ +KE L HS
Sbjct: 508 ENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHS 567
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E++A+ +GLIST IR+ KNLRVC DCH+ IK I+ T R+I+VRD NRFHH +NG
Sbjct: 568 EKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGV 627
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 628 CSCNDYW 634
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 154/323 (47%), Gaps = 44/323 (13%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A++VF ++ ++ V WT MI + G A+DLF +M+ P+ T VLSAC++
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC---GDIDKALQVFEEMKERDVTTY 185
LG L LG+ +HS + + + L+ VG +L++MY++C G +D + +VFE+M E +V ++
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128
Query: 186 NSLIAGLAMHGR-SIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD--LGFEIFQS 242
++I A G EA+E+F +MI+ IRP +F VL AC G L D G +++
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKAC--GNLSDPYTGEQVYSY 186
Query: 243 MTR------------------------------DYGIEPQIEHYGCIVDLLSRVGRPEEA 272
+ D E + Y IVD ++ + EEA
Sbjct: 187 AVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 246
Query: 273 ---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD--CRSADSGTYVLLSN 327
++ I + I SLLS G + GEQI RLL +S L+S
Sbjct: 247 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALIS- 305
Query: 328 AYASSGKWKEAVQIRAKMKEAGV 350
Y+ G + A Q+ +M++ V
Sbjct: 306 MYSRCGNIEAAFQVFNEMEDRNV 328
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 169/355 (47%), Gaps = 40/355 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKC---GEFKDAMQLFDEMPECNDVVASTVMIN 58
G+++H +V++LGL + LV++Y KC G D+ ++F++MPE N
Sbjct: 75 GKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHN---------- 124
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMAR-ALDLFREMQRDNVRPNEV 117
+ WTA+I ++GE + A++LF +M ++RPN
Sbjct: 125 ----------------------VMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHF 162
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+ VL AC L G ++SY K I + VG +LI+MY+R G ++ A + F+ +
Sbjct: 163 SFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDIL 222
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
E+++ +YN+++ G A + +S EA +F E+ + GI + TF +L+ + G + G
Sbjct: 223 FEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGE 282
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
+I + + G + ++ + SR G E A+ M+ + I S+++
Sbjct: 283 QIHGRLLKG-GYKSNQCICNALISMYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAK 340
Query: 298 HGKLQLGEQIAKRLLDCRS-ADSGTYVLLSNAYASSGKWKEAVQ-IRAKMKEAGV 350
HG ++ ++L+ + + TYV + +A + G E + + KE G+
Sbjct: 341 HGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGI 395
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 34/200 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G +IHG++LK G +SN+ L+ +Y +CG + A Q+F+EM + N V++ T MI +
Sbjct: 280 KGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRN-VISWTSMITGF 338
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+HG RAL++F +M +PNE+T V
Sbjct: 339 AKHGFA-------------------------------TRALEMFHKMLETGTKPNEITYV 367
Query: 121 CVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
VLSACS +G + G + +S +H I ++++ R G + +A++ M
Sbjct: 368 AVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPL 427
Query: 179 ERDVTTYNSLIAGLAMHGRS 198
D + +L+ +HG +
Sbjct: 428 MADALVWRTLLGACRVHGNT 447
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/444 (43%), Positives = 292/444 (65%), Gaps = 5/444 (1%)
Query: 49 DVVASTVMINCYVEHGL--VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
D M++ Y + G + A +VF ++ KD V W +MI +NG A AL L+R+
Sbjct: 227 DAGVVNTMLDAYAKGGRRDLGAARKVFDTME-KDVVSWNSMIALYAQNGMSADALGLYRK 285
Query: 107 MQR--DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC 164
M +++ N VT+ +L AC+ G ++ G+ IH+ + + ++ N VG ++++MYS+C
Sbjct: 286 MLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKC 345
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL 224
G ++ A + F+++KE+++ +++++I G MHG EA+++F EM G P +TF+ VL
Sbjct: 346 GRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVL 405
Query: 225 NACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPD 284
ACSH GL+D G + +M + +GIEP +EHYGC+VDLL R G +EAY I MK+ PD
Sbjct: 406 AACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPD 465
Query: 285 HIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAK 344
+ G+LLSAC+IH ++L E AKRL + + + G YVLLSN YA +G WK+ ++R
Sbjct: 466 AAIWGALLSACRIHKNVELAEISAKRLFELDATNCGYYVLLSNIYAEAGMWKDVERMRVL 525
Query: 345 MKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVV 404
+K G++K PG SS+E+ H F +GD HPQ ++IY + +L + ++ GY P+T V
Sbjct: 526 VKTRGIEKPPGYSSVELKGRTHLFYVGDKSHPQHKEIYSYLGKLLEKMQEAGYVPNTGSV 585
Query: 405 LHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKR 464
LHD+++ EK AL IHSE+LAI + L+++ P + I V+KNLRVC DCH+ IKLI I +R
Sbjct: 586 LHDLDEEEKASALHIHSEKLAIAFALMNSVPGSVIHVIKNLRVCTDCHTAIKLITKIAQR 645
Query: 465 KIIVRDRNRFHHFENGTCSCGDYW 488
+IIVRD RFHHF++G+CSCGDYW
Sbjct: 646 EIIVRDLQRFHHFKDGSCSCGDYW 669
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 37/206 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ IH QV+++GL N +V++Y KCG + A + F ++ E N +++ + MI Y
Sbjct: 316 GKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKN-ILSWSAMITGYG 374
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG +G+ ALD+F EM R PN +T +
Sbjct: 375 MHG-----------------------------HGQ--EALDIFNEMCRSGQNPNYITFIS 403
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVG--GALINMYSRCGDIDKALQVFEEMKE 179
VL+ACS G L+ GR+ ++ M K R + V G ++++ R G +D+A + +EMK
Sbjct: 404 VLAACSHAGLLDKGRYWYNAM-KKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKV 462
Query: 180 R-DVTTYNSLIAGLAMHGRSIEAVEM 204
+ D + +L++ +H +++E E+
Sbjct: 463 KPDAAIWGALLSACRIH-KNVELAEI 487
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/489 (41%), Positives = 299/489 (61%), Gaps = 2/489 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN-DVVASTVMINCY 60
G +IH ++ G + L+ +Y +CG + A +L ++ + + T +++ Y
Sbjct: 298 GEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGY 357
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++ G + A +F +K +D V WTAMI G ++G A++LFR M + RPN T+
Sbjct: 358 IKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLA 417
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
+LS S L +L G+ IH K + V ALI MY++ G I A + F+ ++ E
Sbjct: 418 AMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCE 477
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
RD ++ S+I LA HG + EA+E+F M+ +G+RP +T+VGV +AC+H GLV+ G +
Sbjct: 478 RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY 537
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F M I P + HY C+VDL R G +EA +FI M I PD + GSLLSAC+++
Sbjct: 538 FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYK 597
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+ LG+ A+RLL +SG Y L+N Y++ GKW+EA +IR MK+ V+KE G S I
Sbjct: 598 NIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
EV +++H F + D HPQ+ +IY M+++ +K GY P T VLHD+E+ KE L
Sbjct: 658 EVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRH 717
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GLIST TT+R++KNLRVCNDCH+ IK I+ + R+IIVRD RFHHF++
Sbjct: 718 HSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKD 777
Query: 480 GTCSCGDYW 488
G CSC DYW
Sbjct: 778 GFCSCRDYW 786
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 187/415 (45%), Gaps = 73/415 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H ++KLGLR N S L+ +Y KCG+ A +FD M D+ + MI ++
Sbjct: 165 GKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMV-VKDISSWNAMIALHM 223
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN-VRPNEVTIV 120
+ G ++ A F ++ +D V W +MI G + G RALD+F +M RD+ + P+ T+
Sbjct: 224 QVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLA 283
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC---------------- 164
VLSAC+ L L +G IHS++ D++ IV ALI+MYSRC
Sbjct: 284 SVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTK 343
Query: 165 -----------------GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
GD+++A +F+ +K+RDV + ++I G HG EA+ +FR
Sbjct: 344 DLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRS 403
Query: 208 MINQGIRPTKVTFVGVLNACS-----------HGGLVDLGFEIFQ--------------- 241
M+ + RP T +L+ S HG V G EI+
Sbjct: 404 MVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSG-EIYSVSVSNALITMYAKAG 462
Query: 242 ---SMTRDYGI---EPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLL 292
S +R + + E + ++ L++ G EEA + M + PDHI +
Sbjct: 463 SITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVF 522
Query: 293 SACKIHGKLQLGEQIAKRLLDCRS--ADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
SAC G + G Q + D Y + + + +G +EA + KM
Sbjct: 523 SACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKM 577
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 140/278 (50%), Gaps = 44/278 (15%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
+H +V+K GL + L+ +Y K G A +LFDEMP +TV+ + Y + G
Sbjct: 36 VHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVL-SAYAKRG 94
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
++++ E F R+ +D+V WT MI G G+ +A+ + EM R+ + P++ T+ VL+
Sbjct: 95 DMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLA 154
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD------------------ 166
+ + LE G+ +HS++ K + N V +L+NMY++CGD
Sbjct: 155 SVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISS 214
Query: 167 -------------IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG- 212
+D A+ FE+M ERD+ T+NS+I+G G + A++MF +M+
Sbjct: 215 WNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSM 274
Query: 213 IRPTKVTFVGVLNACS-----------HGGLVDLGFEI 239
+ P + T VL+AC+ H +V GF+I
Sbjct: 275 LSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDI 312
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/463 (43%), Positives = 304/463 (65%), Gaps = 7/463 (1%)
Query: 28 YGKCGEFKDAMQLFDEM-PECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTA 86
Y + G ++A++LFDEM + V MI+ Y+ G +++A ++F+ + ++ V W +
Sbjct: 146 YAQNGLAEEALRLFDEMLGAYRNSVTWNAMISAYMRVGDLDSARKLFNTMPGRNVVTWNS 205
Query: 87 MIDGLVRNGEMARALDLFREM-QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKH 145
MI G +NG+ A A++LF+EM + P+EVT+V V+SAC LGALELG W+ ++ ++
Sbjct: 206 MIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTEN 265
Query: 146 RIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMF 205
+I L+ A+I MYSRCG ++ A +VF+EM RDV +YN+LI+G A HG +EA+ +
Sbjct: 266 QIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLM 325
Query: 206 REMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSR 265
M GI P +VTF+GVL ACSH GL++ G ++F+S+ +P I+HY C+VDLL R
Sbjct: 326 STMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK-----DPAIDHYACMVDLLGR 380
Query: 266 VGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLL 325
VG E+A + M + P + GSLL+A +IH +++LGE A +L + +SG ++LL
Sbjct: 381 VGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILL 440
Query: 326 SNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKM 385
SN YAS+G+WK+ +IR MK+ GV+K G S +E ++H+FI+ D H + + IY+ +
Sbjct: 441 SNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLL 500
Query: 386 QELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNL 445
EL++ ++ GY VL D+E+ EKE + HSE+LAICY L+ ++ IRVVKNL
Sbjct: 501 IELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNL 560
Query: 446 RVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
RVC DCH+ IK+I+ + R IIVRD NRFH F +G CSC DYW
Sbjct: 561 RVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 603
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 160/361 (44%), Gaps = 88/361 (24%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGK---------CGEFK-----DAMQLFDEMPEC 47
G H VLKLG S+ R ++++Y + G +K A LFD MPE
Sbjct: 44 GIGFHAHVLKLGHGSDAFVRNAVIDMYARKVADWNAMVSGYWKWESEGQAQWLFDVMPER 103
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
N V+ T M+ Y + +E A F + + V W AM+ G +NG AL LF EM
Sbjct: 104 N-VITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEM 162
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+G +R N + A+I+ Y R GD+
Sbjct: 163 ----------------------------------LGAYR---NSVTWNAMISAYMRVGDL 185
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN-QGIRPTKVTFVGVLNA 226
D A ++F M R+V T+NS+IAG A +G+S A+E+F+EMI + + P +VT V V++A
Sbjct: 186 DSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISA 245
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE---------------- 270
C H G ++LG + + +T + I+ I + ++ + SR G E
Sbjct: 246 CGHLGALELGNWVVRFLTENQ-IKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVS 304
Query: 271 ---------------EAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
EA + ++ MK I PD + +L+AC G L+ G ++ + +
Sbjct: 305 YNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK 364
Query: 313 D 313
D
Sbjct: 365 D 365
>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
Length = 681
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/440 (44%), Positives = 282/440 (64%), Gaps = 1/440 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DVV +T +++ Y ++GL++ A VF + ++ V W+AMI G +NG+ AL LFR MQ
Sbjct: 243 DVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQ 302
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
++P+ +V L ACS +G L+LGR +H ++ + R D N I+G A I+MYS+CG +
Sbjct: 303 ASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVR-RFDFNCILGTAAIDMYSKCGSLA 361
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +F + +RD+ +N++IA HGR +A+ +F+EM G+RP TF +L+A S
Sbjct: 362 SAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALS 421
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLV+ G F M + I P +HY C+VDLL+R G EEA D +T+MK P +
Sbjct: 422 HSGLVEEGKLWFGCMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIW 481
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+LLS C + KL+LGE IA +L+ + D G L+SN YA++ KW + Q+R MK++
Sbjct: 482 VALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDS 541
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
G +K PGCSSIE+ H F++ D HPQRE+I K+ +L ++ GY P TE V HD+
Sbjct: 542 GSKKMPGCSSIEIRGTRHAFLMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYHDL 601
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
E+ KE L+ HSE+LAI +GL++T P T + ++KNLRVC DCH IK I+ I R+I+V
Sbjct: 602 EEEVKEQQLSYHSEKLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVV 661
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD RFHHF++G CSC DYW
Sbjct: 662 RDAKRFHHFKDGVCSCRDYW 681
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 157/296 (53%), Gaps = 14/296 (4%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+DV + +++ Y G + +A +VF R+ +D V W+ M+ G V G+ A+ ++R M
Sbjct: 141 DDVFVCSSLLHLYARWGAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRM 200
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ D V+ +EV ++ V+ AC+ + +G +H ++ +H + ++ + +L++MY++ G +
Sbjct: 201 REDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLL 260
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
D A +VF M R+ +++++I+G A +G+S EA+ +FR M GI+P V L AC
Sbjct: 261 DVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLAC 320
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI-----VDLLSRVGRPEEAYDFITNMKIA 282
S+ G + LG + + R + + CI +D+ S+ G A + NM
Sbjct: 321 SNIGFLKLGRSVHGFIVRRF-------DFNCILGTAAIDMYSKCGSLASA-QMLFNMISD 372
Query: 283 PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC-RSADSGTYVLLSNAYASSGKWKE 337
D I+ ++++ C HG+ Q + + + + D T+ L +A + SG +E
Sbjct: 373 RDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEE 428
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 139/291 (47%), Gaps = 52/291 (17%)
Query: 93 RNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWI--HSYMGKHRIDLN 150
R G A AL +FR + RP+ T LSAC++LG L G + ++ ++ D+
Sbjct: 86 RRGSPASALRVFRALP-PAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDV- 143
Query: 151 HIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
V +L+++Y+R G + A++VF+ M RD T+++++AG G+ ++A++M+R M
Sbjct: 144 -FVCSSLLHLYARWGAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRE 202
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
G++ +V +GV+ AC+ V +G + + R +G+ + +VD+ ++ G
Sbjct: 203 DGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLR-HGMRMDVVTATSLVDMYAKNGL-- 259
Query: 271 EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYA 330
L AC++ G + + ++ + + +A
Sbjct: 260 --------------------LDVACRVFGLMVHRNDV-------------SWSAMISGFA 286
Query: 331 SSGKWKEAVQIRAKMKEAGVQKEPG--------CSSI---EVNNEIHEFIL 370
+G+ EA+++ M+ +G+Q + G CS+I ++ +H FI+
Sbjct: 287 QNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIV 337
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/462 (41%), Positives = 285/462 (61%), Gaps = 2/462 (0%)
Query: 28 YGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAM 87
Y G +DA + F+ MP V+A MI + E G + A VF ++ +D W M
Sbjct: 244 YTLSGRIEDAEEFFEVMP-MKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGM 302
Query: 88 IDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRI 147
I R G ALDLF +MQ+ VRP+ +++ +LS C+ L +L+ GR +H+++ + +
Sbjct: 303 IKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQF 362
Query: 148 DLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
D + V L+ MY +CG++ KA VF+ +D+ +NS+I+G A HG EA+++F E
Sbjct: 363 DDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHE 422
Query: 208 MINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
M + G P KVT + +L ACS+ G ++ G EIF+SM + + P +EHY C VD+L R G
Sbjct: 423 MPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAG 482
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSN 327
+ ++A + I +M I PD + G+LL ACK H +L L E AK+L + ++GTYVLLS+
Sbjct: 483 QVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSS 542
Query: 328 AYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIR-HPQREQIYKKMQ 386
AS KW + +R M+ V K PGCS IEV ++H F G I+ HP++ I ++
Sbjct: 543 INASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLE 602
Query: 387 ELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLR 446
+ +++ GYSP VLHD+++ EK +L+ HSERLA+ YGL+ IRV+KNLR
Sbjct: 603 KTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLR 662
Query: 447 VCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
VC DCH+ IKLI+ +T+R+II+RD NRFHHF NG CSC DYW
Sbjct: 663 VCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 155/347 (44%), Gaps = 47/347 (13%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
+V Y G K+A QLFDEM E N VV+ +++ Y+++ ++ A VF + ++ V
Sbjct: 54 IVSGYFSNGLPKEARQLFDEMSERN-VVSWNGLVSGYIKNRMIVEARNVFELMPERNVVS 112
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
WTAM+ G ++ G + A LF M NEV+ + G ++ R ++ M
Sbjct: 113 WTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDKARKLYDMMP 168
Query: 144 -KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAV 202
K + +++GG R G +D+A +F+EM+ER+V T+ ++I G + R A
Sbjct: 169 VKDVVASTNMIGG-----LCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVAR 223
Query: 203 EMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ-----------SMTRDYGIEP 251
++F M + T+V++ +L + G ++ E F+ +M +G
Sbjct: 224 KLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVG 279
Query: 252 QIEHYGCIVDLL---------------SRVGRPEEAYDFITNMK---IAPDHIMLGSLLS 293
+I + DL+ R G EA D M+ + P L S+LS
Sbjct: 280 EISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILS 339
Query: 294 ACKIHGKLQLGEQIAKRLLDCRSADSGTYV--LLSNAYASSGKWKEA 338
C LQ G Q+ L+ C+ D YV +L Y G+ +A
Sbjct: 340 VCATLASLQYGRQVHAHLVRCQ-FDDDVYVASVLMTMYVKCGELVKA 385
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 168/370 (45%), Gaps = 41/370 (11%)
Query: 8 QVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVE 67
V +L N + +V+ Y + G +A LF MPE N+V + TVM ++ G ++
Sbjct: 100 NVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEV-SWTVMFGGLIDDGRID 158
Query: 68 NAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACS 127
A +++ + VKD V T MI GL R G + A +F EM+ NV VT +++
Sbjct: 159 KARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNV----VTWTTMITGYR 214
Query: 128 QLGALELGR-------------WIHSYMG---KHRIDLNH-----------IVGGALINM 160
Q +++ R W +G RI+ I A+I
Sbjct: 215 QNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVG 274
Query: 161 YSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTF 220
+ G+I KA +VF+ M++RD T+ +I G +EA+++F +M QG+RP+ +
Sbjct: 275 FGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSL 334
Query: 221 VGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
+ +L+ C+ + G ++ + R + + ++ + + G +A + +
Sbjct: 335 ISILSVCATLASLQYGRQVHAHLVR-CQFDDDVYVASVLMTMYVKCGELVKA-KLVFDRF 392
Query: 281 IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSA----DSGTYVLLSNAYASSGKWK 336
+ D IM S++S HG LGE+ K + S+ + T + + A + +GK +
Sbjct: 393 SSKDIIMWNSIISGYASHG---LGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLE 449
Query: 337 EAVQIRAKMK 346
E ++I M+
Sbjct: 450 EGLEIFESME 459
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 34/198 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H +++ + L+ +Y KCGE A +FD D++ +I+ Y
Sbjct: 350 GRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRF-SSKDIIMWNSIISGYA 408
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HGL E AL +F EM PN+VT++
Sbjct: 409 SHGLGEE-------------------------------ALKIFHEMPSSGTMPNKVTLIA 437
Query: 122 VLSACSQLGALELGRWIHSYM-GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
+L+ACS G LE G I M K + ++M R G +DKA+++ E M +
Sbjct: 438 ILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIK 497
Query: 180 RDVTTYNSLIAGLAMHGR 197
D T + +L+ H R
Sbjct: 498 PDATVWGALLGACKTHSR 515
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 137/347 (39%), Gaps = 63/347 (18%)
Query: 53 STVMINCYVEH------GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
++ +NC E G + A + F ++ K W +++ G NG A LF E
Sbjct: 14 TSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDE 73
Query: 107 MQRDNV---------------------------RPNEVTIVCVLSACSQLGALELGRWIH 139
M NV N V+ ++ Q G + +
Sbjct: 74 MSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLF 133
Query: 140 SYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSI 199
M + ++ G LI+ G IDKA ++++ M +DV ++I GL GR
Sbjct: 134 WRMPERNEVSWTVMFGGLID----DGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVD 189
Query: 200 EAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI 259
EA +F EM + + VT+ ++ VD+ ++F+ M P+
Sbjct: 190 EARLIFDEMRERNV----VTWTTMITGYRQNNRVDVARKLFEVM-------PEKTEVSWT 238
Query: 260 VDLLSRV--GRPEEAYDFITNMKIAPDHIMLGSLLSACK--IHGKLQLGE-QIAKRLLDC 314
LL GR E+A +F M + P + AC I G ++GE A+R+ D
Sbjct: 239 SMLLGYTLSGRIEDAEEFFEVMPMKP--------VIACNAMIVGFGEVGEISKARRVFDL 290
Query: 315 -RSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE-PGCSSI 359
D+ T+ + AY G EA+ + A+M++ GV+ P SI
Sbjct: 291 MEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISI 337
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/487 (39%), Positives = 299/487 (61%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H ++K L N L+++Y KC +DA DV
Sbjct: 535 GRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDA-----------DVA---------- 573
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
F+R+ V+D WT +I + + +AL+ FR+MQ++ V+PNE T+
Sbjct: 574 -----------FNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAG 622
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
LS CS L +LE G+ +HS + K + VG AL++MY++CG +++A +FE + RD
Sbjct: 623 CLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRD 682
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+N++I G A +G+ +A+ FR M+++GI P VTF G+L+ACSH GLV+ G E F
Sbjct: 683 TIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFN 742
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM RD+GI P ++H C+VD+L RVG+ +E DFI M+++ + ++ ++L A K+H L
Sbjct: 743 SMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNL 802
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
LGE+ A +L + + + +Y+LLSN +A+ G+W + ++R+ M GV+KEPGCS +E
Sbjct: 803 VLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEA 862
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N ++H F+ D HPQ ++I+ K+ EL + + Y P TE VLH++ + EK+ L HS
Sbjct: 863 NGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHS 922
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ERLA+ + LIST IR+ KNLR+C DCH ++K I++IT ++I+VRD RFHHF+NG
Sbjct: 923 ERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGA 982
Query: 482 CSCGDYW 488
CSC D+W
Sbjct: 983 CSCNDFW 989
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 152/344 (44%), Gaps = 75/344 (21%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
+ IHG ++K + + + LV +Y KC A + +MP+
Sbjct: 131 AKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPD--------------- 175
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+D V WTA+I GLV G ++ LF+EMQ + + PNE T+
Sbjct: 176 -----------------RDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLAT 218
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
L ACS AL+LG+ +H+ K + L+ VG AL+++Y++CG+I+ A ++F M E++
Sbjct: 219 GLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQN 278
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG----------- 230
T+N L+ G A G +++F M+ ++ + T VL C++
Sbjct: 279 DVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHS 338
Query: 231 ---------------GLVDL---------GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRV 266
GLVD+ +F+++ + P I + ++ L +
Sbjct: 339 LIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKK-----PDIVVWSALITCLDQQ 393
Query: 267 GRPEEAYDFITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQI 307
G+ EE+ M++ P+ + SLLSA G LQ G+ I
Sbjct: 394 GQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSI 437
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 127/266 (47%), Gaps = 33/266 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H Q KLGL + LV+LY KCGE + A ++F MPE NDV
Sbjct: 232 GKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVT---------- 281
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
W +++G + G++ L LF M +V+ NE T+
Sbjct: 282 ----------------------WNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTT 319
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL C+ L+ G+ IHS + K + N +G L++MYS+CG A+ VF+ +K+ D
Sbjct: 320 VLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPD 379
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ +++LI L G+S E++++F M P + T +L+A ++ G + G I
Sbjct: 380 IVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHA 439
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVG 267
+ + YG E + +V + + G
Sbjct: 440 CVWK-YGFETDVAVSNALVTMYMKNG 464
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 137/292 (46%), Gaps = 35/292 (11%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV S ++ Y+++G V + +++ + +D + W A + GL G R L +F M
Sbjct: 449 DVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHML 508
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ PN T + +L +CS L + GR +H+++ K+++D N+ V ALI+MY++C ++
Sbjct: 509 EEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLE 568
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A F + RD+ T+ +I A + +A+ FR+M +G++P + T G L+ CS
Sbjct: 569 DADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCS 628
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEE----------------- 271
++ G ++ SM G + +VD+ ++ G EE
Sbjct: 629 SLASLEGGQQL-HSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWN 687
Query: 272 -----------------AYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQ 306
A+ + + I+PD + +LSAC G ++ G++
Sbjct: 688 TIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKE 739
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 158/372 (42%), Gaps = 66/372 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ IH ++K G N LV++Y KCG DA+ +F + + D+V + +I C
Sbjct: 332 QGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKK-PDIVVWSALITCL 390
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ G E + ++F +++ DT+ PN+ TI
Sbjct: 391 DQQGQSEESIKLFHLMRLGDTL-------------------------------PNQYTIC 419
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+LSA + G L+ G+ IH+ + K+ + + V AL+ MY + G + +++E M +R
Sbjct: 420 SLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDR 479
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D+ ++N+ ++GL G + +F M+ +G P TF+ +L +CS V G ++
Sbjct: 480 DLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVH 539
Query: 241 QSMTR------DYGIEPQIEHYG------------------------CIVDLLSRVGRPE 270
+ + ++ I+ Y I+ ++ + E
Sbjct: 540 AHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGE 599
Query: 271 EAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC-RSADSGTYVLLS 326
+A ++ M+ + P+ L LS C L+ G+Q+ + +D L
Sbjct: 600 KALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALV 659
Query: 327 NAYASSGKWKEA 338
+ YA G +EA
Sbjct: 660 DMYAKCGCMEEA 671
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 91/185 (49%), Gaps = 4/185 (2%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L C+ +L + + IH + K I+ + + +L+N+Y++C A V +M +RD
Sbjct: 118 MLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRD 177
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ +LI GL G + +++ +F+EM N+GI P + T L ACS +DLG ++
Sbjct: 178 VVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQM-H 236
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPD---HIMLGSLLSACKIH 298
+ G+ + +VDL ++ G E A M D +++L +
Sbjct: 237 AQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVT 296
Query: 299 GKLQL 303
G L+L
Sbjct: 297 GVLKL 301
>gi|356513527|ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Glycine max]
Length = 579
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/491 (39%), Positives = 295/491 (60%), Gaps = 38/491 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++H + K G + + +++LY C DA ++FDEMP
Sbjct: 123 GVQVHCNIFKDGHQWDTLLLTAVMDLYSLCQRGGDACKVFDEMPH--------------- 167
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR--PNEVTI 119
+DTV W MI +RN AL LF MQ + + P++VT
Sbjct: 168 -----------------RDTVAWNVMISCCIRNNRTRDALSLFDVMQGSSYKCEPDDVTC 210
Query: 120 VCVLSACSQLGALELGRWIHSYMGK--HRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+ +L AC+ L ALE G IH Y+ + +R LN + +LI+MYSRCG +DKA +VF+ M
Sbjct: 211 LLLLQACAHLNALEFGERIHGYIMERGYRDALN--LCNSLISMYSRCGCLDKAYEVFKGM 268
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
++V +++++I+GLAM+G EA+E F EM+ G+ P TF GVL+ACS+ G+VD G
Sbjct: 269 GNKNVVSWSAMISGLAMNGYGREAIEAFEEMLRIGVLPDDQTFTGVLSACSYSGMVDEGM 328
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F M+R++G+ P + HYGC+VDLL R G ++AY I +M + PD M +LL AC+I
Sbjct: 329 SFFHRMSREFGVTPNVHHYGCMVDLLGRAGLLDKAYQLIMSMVVKPDSTMWRTLLGACRI 388
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
HG + LGE++ L++ ++ ++G YVLL N Y+S+G W++ ++R MK +Q PGCS
Sbjct: 389 HGHVTLGERVIGHLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRKLMKNKSIQTTPGCS 448
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
+IE+ +HEF++ D+ H + +IY+ + E+ +++ GY LH ++D EK + L
Sbjct: 449 TIELKGAVHEFVVDDVSHSRNREIYETLDEINHQLRIAGYVVELSSELHKMDDKEKGYVL 508
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
+ HSE+LA+ +G+++T P T +RV NLRVC DCH+ +KL + + R +++RD NRFHHF
Sbjct: 509 SHHSEKLAVAFGVLATPPGTILRVASNLRVCVDCHNFLKLFSGVYNRDVVLRDHNRFHHF 568
Query: 478 ENGTCSCGDYW 488
G CSC DYW
Sbjct: 569 RGGRCSCSDYW 579
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 91/198 (45%), Gaps = 3/198 (1%)
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
+ MI + + L L+R+M+R + + ++ + +C + L G +H +
Sbjct: 72 YNTMIRACSMSDSPQKGLLLYRDMRRRGIAADPLSSSFAVKSCIRFLYLPGGVQVHCNIF 131
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
K + ++ A++++YS C A +VF+EM RD +N +I+ + R+ +A+
Sbjct: 132 KDGHQWDTLLLTAVMDLYSLCQRGGDACKVFDEMPHRDTVAWNVMISCCIRNNRTRDALS 191
Query: 204 MFREMINQGIR--PTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVD 261
+F M + P VT + +L AC+H ++ G E + G + ++
Sbjct: 192 LFDVMQGSSYKCEPDDVTCLLLLQACAHLNALEFG-ERIHGYIMERGYRDALNLCNSLIS 250
Query: 262 LLSRVGRPEEAYDFITNM 279
+ SR G ++AY+ M
Sbjct: 251 MYSRCGCLDKAYEVFKGM 268
>gi|297735590|emb|CBI18084.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/454 (43%), Positives = 283/454 (62%), Gaps = 12/454 (2%)
Query: 47 CNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
C+D +++ C + +F ++K + W MI GLV N A++ +
Sbjct: 43 CHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGL 102
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELG---------RWIHSYMGKHRIDLNHIVGGAL 157
M+ + PN T VL AC++L L+LG WIH + + + N VG +L
Sbjct: 103 MRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKEWIHKCIMEMGMVRNVFVGTSL 162
Query: 158 INMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ---GIR 214
++MY++CG+++KA VF+ M E+D+ ++ ++I G A++G EA+++F +M + GI+
Sbjct: 163 VDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENKLGIK 222
Query: 215 PTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYD 274
P TF+G+L C+H GLVD G F SM R + + P IEHYGC+VDLL R G +EA+
Sbjct: 223 PDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQ 282
Query: 275 FITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGK 334
I NM + + I+ G+LL AC+IH QL E K+L++ +SG YVLLSN Y+++ K
Sbjct: 283 LIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLK 342
Query: 335 WKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKL 394
W EA ++R M E +QK PGCS IEV+ +HEF++GD HP E+IY K+ EL + +K+
Sbjct: 343 WDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKV 402
Query: 395 EGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSM 454
GY P+T+ VL DIE+ EKE L HSE+LAI +GLIS P IRVVKNLRVC DCH
Sbjct: 403 AGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKNLRVCGDCHMA 462
Query: 455 IKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
IKLI++IT R+I VRD NRFH F G+CSC DYW
Sbjct: 463 IKLISSITGREITVRDNNRFHCFREGSCSCNDYW 496
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 84/169 (49%), Gaps = 10/169 (5%)
Query: 43 EMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALD 102
EM +V T +++ Y + G +E A VF + KD V W AMI G NG A+D
Sbjct: 149 EMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAID 208
Query: 103 LFREMQRDN---VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGA 156
LF +MQR+N ++P+ T + +L C+ G ++ GR + M + + H G
Sbjct: 209 LFLQMQRENKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHY--GC 266
Query: 157 LINMYSRCGDIDKALQVFEEMK-ERDVTTYNSLIAGLAMHGRSIEAVEM 204
++++ R G +D+A Q+ M E + + +L+ +H R + E+
Sbjct: 267 MVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIH-RDTQLAEL 314
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/487 (40%), Positives = 300/487 (61%), Gaps = 33/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR IH VLK GL S+ LV++Y KC
Sbjct: 120 GRVIHDVVLKHGLLSDHFVCASLVDMYAKCI----------------------------- 150
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+VE+A +F R+ KD V WT MI G + +L LF M+ + V P++V +V
Sbjct: 151 ---VVEDAQRLFERMLSKDLVTWTVMI-GAYADCNAYESLVLFDRMREEGVVPDKVAMVT 206
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V++AC++LGA+ R+ + Y+ ++ L+ I+G A+I+MY++CG ++ A +VF+ MKE++
Sbjct: 207 VVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKN 266
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +++++IA HGR +A+++F M++ I P +VTFV +L ACSH GL++ G F
Sbjct: 267 VISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFN 326
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM ++ + P ++HY C+VDLL R GR +EA I M + D + +LL AC+IH K+
Sbjct: 327 SMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACRIHSKM 386
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+L E+ A LL+ + + G YVLLSN YA +GKW++ + R M + ++K PG + IEV
Sbjct: 387 ELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKKIPGWTWIEV 446
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+N+ ++F +GD HPQ ++IY+ + L + +++ GY P T+ VL D+E+ K+ L HS
Sbjct: 447 DNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEMAGYVPDTDFVLQDVEEEVKQEMLYTHS 506
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GLI+ IR+ KNLRVC DCH+ K++++I +R IIVRD NRFHHF +GT
Sbjct: 507 EKLAIAFGLIAIPEGEPIRISKNLRVCGDCHTFSKMVSSIMRRSIIVRDANRFHHFNDGT 566
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 567 CSCGDYW 573
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 182/410 (44%), Gaps = 64/410 (15%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
D+V + ++ Y +H +++A+ +F + ++D+ W+ M+ G + G+ A FRE+
Sbjct: 33 QDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAGDHAGCYATFREL 92
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
R V P+ T+ V+ C L++GR IH + KH + +H V +L++MY++C +
Sbjct: 93 LRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVV 152
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+ A ++FE M +D+ T+ +I A + E++ +F M +G+ P KV V V+NAC
Sbjct: 153 EDAQRLFERMLSKDLVTWTVMIGAYA-DCNAYESLVLFDRMREEGVVPDKVAMVTVVNAC 211
Query: 228 SHGG-----------LVDLGF------------------------EIFQSMTRDYGIEPQ 252
+ G +V GF E+F M E
Sbjct: 212 AKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMK-----EKN 266
Query: 253 IEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAK 309
+ + ++ GR ++A D M I P+ + SLL AC G ++ G +
Sbjct: 267 VISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFN 326
Query: 310 RLLDCRSA--DSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHE 367
+ + + D Y + + +G+ EA+++ M ++E + +
Sbjct: 327 SMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAM------------TVEKDERLWS 374
Query: 368 FILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIE----DWEK 413
+LG R + ++ +K +++L+ +P V+L +I WEK
Sbjct: 375 ALLGACRIHSKMELAEKAA--NSLLELQPQNPGHYVLLSNIYAKAGKWEK 422
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/441 (43%), Positives = 285/441 (64%), Gaps = 1/441 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D+ ++ Y + GLV++A VF+ + D + W +I G +NG + A++++ M+
Sbjct: 383 DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIME 442
Query: 109 RDN-VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ + N+ T V VL ACSQ GAL G +H + K+ + L+ V +L +MY +CG +
Sbjct: 443 EEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRL 502
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+ AL +F ++ + +N+LIA HG +AV +F+EM+++G++P +TFV +L+AC
Sbjct: 503 EDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSAC 562
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SH GLVD G F+ M DYGI P ++HYGC+VD+ R G+ E A FI +M + PD +
Sbjct: 563 SHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASI 622
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
G+LLSAC++HG + LG+ ++ L + G +VLLSN YAS+GKW+ +IR+
Sbjct: 623 WGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHG 682
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
G++K PG SS+EV+N++ F G+ HP E++Y+++ L+ +K+ GY P VL D
Sbjct: 683 KGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQD 742
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
+ED EKE L HSERLAI + LI+T TTIR+ KNLRVC DCHS+ K I+ IT+R+II
Sbjct: 743 VEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREII 802
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
VRD NRFHHF+NG CSCGDYW
Sbjct: 803 VRDSNRFHHFKNGVCSCGDYW 823
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 151/289 (52%), Gaps = 5/289 (1%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+++ S +I+ Y E G + + +VF R+ V+D + W ++I N + RA+ LF+EM
Sbjct: 280 SELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM 339
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHI-VGGALINMYSRCGD 166
+ ++P+ +T++ + S SQLG + R + + + L I +G A++ MY++ G
Sbjct: 340 RLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGL 399
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLN 225
+D A VF + DV ++N++I+G A +G + EA+EM+ M +G I + T+V VL
Sbjct: 400 VDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLP 459
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDH 285
ACS G + G ++ + ++ G+ + + D+ + GR E+A + +
Sbjct: 460 ACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRV-NS 517
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRLLD-CRSADSGTYVLLSNAYASSG 333
+ +L++ HG + + K +LD D T+V L +A + SG
Sbjct: 518 VPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSG 566
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 146/334 (43%), Gaps = 50/334 (14%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV + +I+ Y + V NA +F + V+D W AMI G ++G AL L ++
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR 243
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ VT+V +LSAC++ G G IHSY KH ++ V LI++Y+ G +
Sbjct: 244 A----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFV------- 221
+VF+ M RD+ ++NS+I ++ + + A+ +F+EM I+P +T +
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILS 359
Query: 222 --GVLNAC---------------------------SHGGLVDLGFEIFQSMTRDYGIEPQ 252
G + AC + GLVD +F +
Sbjct: 360 QLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP-----NTD 414
Query: 253 IEHYGCIVDLLSRVGRPEEAYDFITNM----KIAPDHIMLGSLLSACKIHGKLQLGEQIA 308
+ + I+ ++ G EA + M +IA + S+L AC G L+ G ++
Sbjct: 415 VISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLH 474
Query: 309 KRLL-DCRSADSGTYVLLSNAYASSGKWKEAVQI 341
RLL + D L++ Y G+ ++A+ +
Sbjct: 475 GRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSL 508
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 38/200 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G ++HG++LK GL + L ++YGKCG +DA+ LF ++P N V +T +I C+
Sbjct: 469 QGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNT-LIACH 527
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG +GE +A+ LF+EM + V+P+ +T V
Sbjct: 528 GFHG-----------------------------HGE--KAVMLFKEMLDEGVKPDHITFV 556
Query: 121 CVLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+LSACS G ++ G+W M L H G +++MY R G ++ AL+ + M
Sbjct: 557 TLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHY--GCMVDMYGRAGQLETALKFIKSM 614
Query: 178 K-ERDVTTYNSLIAGLAMHG 196
+ D + + +L++ +HG
Sbjct: 615 SLQPDASIWGALLSACRVHG 634
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 119/257 (46%), Gaps = 16/257 (6%)
Query: 46 ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNG---EMARALD 102
+ +V S ++N Y G V A F ++ +D W MI G R G E+ R
Sbjct: 82 QIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFS 141
Query: 103 LFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYS 162
LF M + P+ T VL AC + G IH K + V +LI++YS
Sbjct: 142 LF--MLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYS 196
Query: 163 RCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPT-KVTFV 221
R + A +F+EM RD+ ++N++I+G G + EA+ + + G+R VT V
Sbjct: 197 RYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVV 251
Query: 222 GVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKI 281
+L+AC+ G + G I S + +G+E ++ ++DL + GR + M +
Sbjct: 252 SLLSACTEAGDFNRGVTI-HSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYV 310
Query: 282 APDHIMLGSLLSACKIH 298
D I S++ A +++
Sbjct: 311 R-DLISWNSIIKAYELN 326
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 15/208 (7%)
Query: 150 NHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR-EM 208
N + L+N+Y G++ A F+ ++ RDV +N +I+G G S E + F M
Sbjct: 85 NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFM 144
Query: 209 INQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGR 268
++ G+ P TF VL AC ++D G +I + +G + ++ L SR
Sbjct: 145 LSSGLTPDYRTFPSVLKACR--TVID-GNKI-HCLALKFGFMWDVYVAASLIHLYSR--- 197
Query: 269 PEEAYDFITNMKIAPDHIMLGSLLS-ACKIHGKLQLGEQIAKRLLD--CRSADSGTYVLL 325
Y + N +I D + + + S I G Q G L R+ DS T V L
Sbjct: 198 ----YKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSL 253
Query: 326 SNAYASSGKWKEAVQIRAKMKEAGVQKE 353
+A +G + V I + + G++ E
Sbjct: 254 LSACTEAGDFNRGVTIHSYSIKHGLESE 281
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/440 (43%), Positives = 275/440 (62%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D +I+ Y + G + +A EVF ++ +D V W +I G +NG A++ +MQ
Sbjct: 667 DTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQ 726
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+V PN+ + V +L+ACS ALE G+ +H+ + K ++ + VG ALI+MY++CG
Sbjct: 727 EQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQG 786
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+A +VF+ + E++V T+N++I A HG + +A+ F M +GI+P TF +L+AC+
Sbjct: 787 EAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACN 846
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLV G++IF SM +YG+ P IEHYGC+V LL R R +EA I M PD +
Sbjct: 847 HAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVW 906
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+LL AC+IHG + L E A L + + Y+LLSN YA++G+W + +IR M+
Sbjct: 907 ETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGR 966
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
G++KEPG S IEV+N IHEFI D HP+ +IY +++ L ++ GY P T+ VLHD+
Sbjct: 967 GIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDL 1026
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
+E +L HSERLAI YGLI T P T IR+ KNLR+C DCH+ K I+ + R+II
Sbjct: 1027 GKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIA 1086
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD NRFH F+NG CSC DYW
Sbjct: 1087 RDSNRFHSFKNGKCSCEDYW 1106
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 177/388 (45%), Gaps = 39/388 (10%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMP----ECNDVVASTVM 56
E ++ Q+ G++ R T L L+ + D + +++ + N +A+ +M
Sbjct: 414 EAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALM 473
Query: 57 INCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
N Y G + A VF + +D + W +MI G ++G A LF+EMQ + + P+
Sbjct: 474 -NMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDN 532
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
+T VLS C ALELG+ IH + + + L+ +G ALINMY RCG + A VF
Sbjct: 533 ITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHS 592
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
++ RDV ++ ++I G A G ++A+E+F +M N+G RP K TF +L C+ +D G
Sbjct: 593 LQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEG 652
Query: 237 FEIFQ-------------------------SMTR-----DYGIEPQIEHYGCIVDLLSRV 266
++ SMT D I + I+ ++
Sbjct: 653 KKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQN 712
Query: 267 GRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTY 322
G + A +F M+ + P+ SLL+AC L+ G+++ ++ + D
Sbjct: 713 GLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVG 772
Query: 323 VLLSNAYASSGKWKEAVQIRAKMKEAGV 350
L + YA G EA ++ + E V
Sbjct: 773 AALISMYAKCGSQGEAQEVFDNIIEKNV 800
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 174/348 (50%), Gaps = 42/348 (12%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCG---EFKDAMQLFDEMPECNDVVASTVMINCYV 61
+ GQ+ G+ ++ T + L++ + E K +L E +D+ T ++ V
Sbjct: 216 LFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCV 275
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G V++A + F +D V + A+I L ++G A + + M+ D V N T +
Sbjct: 276 RCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLS 335
Query: 122 VLSACSQLGALELGRWIHSYMGK--HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+L+ACS ALE G+ IHS++ + H D+ +G ALI+MY+RCGD+ KA ++F M +
Sbjct: 336 ILNACSTSKALEAGKLIHSHISEDGHSSDVQ--IGNALISMYARCGDLPKARELFYTMPK 393
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
RD+ ++N++IAG A EA+ ++++M ++G++P +VTF+ +L+AC++ G I
Sbjct: 394 RDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMI 453
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA--------------------------- 272
+ + R GI+ ++++ R G EA
Sbjct: 454 HEDILRS-GIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGS 512
Query: 273 -------YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
+ + N ++ PD+I S+LS CK L+LG+QI R+ +
Sbjct: 513 YETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITE 560
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 171/371 (46%), Gaps = 39/371 (10%)
Query: 13 GLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPE---CNDVVASTVMINCYVEHGLVENA 69
G+ NR+T L ++ + + + E +DV +I+ Y G + A
Sbjct: 325 GVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKA 384
Query: 70 FEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQL 129
E+F + +D + W A+I G R + A+ L+++MQ + V+P VT + +LSAC+
Sbjct: 385 RELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANS 444
Query: 130 GALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLI 189
A G+ IH + + I N + AL+NMY RCG + +A VFE + RDV ++NS+I
Sbjct: 445 SAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMI 504
Query: 190 AGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGI 249
AG A HG A ++F+EM N+ + P +TF VL+ C + ++LG +I +T + G+
Sbjct: 505 AGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRIT-ESGL 563
Query: 250 EPQIEHYGCIVDLLSRVGRPEEAYDF---------------------------------- 275
+ + ++++ R G ++A +
Sbjct: 564 QLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQ 623
Query: 276 ITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC-RSADSGTYVLLSNAYASSGK 334
+ N P S+L C L G+++ +L+ D+G L +AY+ SG
Sbjct: 624 MQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGS 683
Query: 335 WKEAVQIRAKM 345
+A ++ KM
Sbjct: 684 MTDAREVFDKM 694
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 168/342 (49%), Gaps = 9/342 (2%)
Query: 15 RSNRSTRLKLVELYGKCGE---FKDAMQLFDEMPEC---NDVVASTVMINCYVEHGLVEN 68
R + R V L C +A ++ +M E D+ S ++IN YV+ V +
Sbjct: 21 RPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLD 80
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A +VF + +D + W ++I + G +A LF EMQ PN++T + +L+AC
Sbjct: 81 AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYS 140
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
LE G+ IHS + K + V +L++MY +CGD+ +A QVF + RDV +YN++
Sbjct: 141 PAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTM 200
Query: 189 IAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYG 248
+ A E + +F +M ++GI P KVT++ +L+A + ++D G I + +T + G
Sbjct: 201 LGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHK-LTVEEG 259
Query: 249 IEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG-KLQLGEQI 307
+ I +V + R G + A D ++ +L++A HG ++ EQ
Sbjct: 260 LNSDIRVGTALVTMCVRCGDVDSAKQAFKGTA-DRDVVVYNALIAALAQHGHNVEAFEQY 318
Query: 308 AKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
+ D + + TY+ + NA ++S + I + + E G
Sbjct: 319 YRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDG 360
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 134/278 (48%), Gaps = 33/278 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G++IH Q++K G + + + L+ +YGKCG+ A Q+F + DVV+ M+ Y
Sbjct: 147 GKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISP-RDVVSYNTMLGLYA 205
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ V+ L LF +M + + P++VT +
Sbjct: 206 QKAYVK-------------------------------ECLGLFGQMSSEGISPDKVTYIN 234
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L A + L+ G+ IH + ++ + VG AL+ M RCGD+D A Q F+ +RD
Sbjct: 235 LLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRD 294
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V YN+LIA LA HG ++EA E + M + G+ + T++ +LNACS ++ G I
Sbjct: 295 VVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHS 354
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM 279
++ D G ++ ++ + +R G +A + M
Sbjct: 355 HISED-GHSSDVQIGNALISMYARCGDLPKARELFYTM 391
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 34/198 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+ +H +++K L+ + L+ +Y KCG +A ++FD + E N VV MIN Y
Sbjct: 752 EGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKN-VVTWNAMINAY 810
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+HGL ++AL F M+++ ++P+ T
Sbjct: 811 AQHGLA-------------------------------SKALGFFNCMEKEGIKPDGSTFT 839
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG-GALINMYSRCGDIDKALQVFEEMK- 178
+LSAC+ G + G I S M L I G L+ + R +A + +M
Sbjct: 840 SILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPF 899
Query: 179 ERDVTTYNSLIAGLAMHG 196
D + +L+ +HG
Sbjct: 900 PPDAAVWETLLGACRIHG 917
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/443 (42%), Positives = 279/443 (62%), Gaps = 5/443 (1%)
Query: 48 NDVVASTVMINCYVE-HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
+D+V V++N Y + +E A +VF R++ +D + W +I V+ G+ ALD+F++
Sbjct: 297 SDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQ 356
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
MQ +NV PNE+T+ VLSAC+ LGA G+ +H+ + R + ++ +L+NMY+RCG
Sbjct: 357 MQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGS 416
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+D + VF ++++ + ++++LIA A HG S +E F E++ +G+ VT V L+A
Sbjct: 417 LDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSA 476
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
CSHGG++ G + F SM D+G+ P H+ C+VDLLSR GR E A + I +M PD +
Sbjct: 477 CSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAV 536
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADS-GTYVLLSNAYASSGKWKEAVQIRAKM 345
SLLS CK+H + ++A +L + S D T LLSN YA +G+W + +R
Sbjct: 537 AWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDD---VRKTR 593
Query: 346 KEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVL 405
+K PGCS IE+N+ +HEF+ GD HP+ E I +++ L + +K GY P +VL
Sbjct: 594 NRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVL 653
Query: 406 HDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRK 465
H++++ EKE L HSE+LAI YGLIST P T + +VKNLR C DCH+ K I+ I RK
Sbjct: 654 HNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRK 713
Query: 466 IIVRDRNRFHHFENGTCSCGDYW 488
I+VRD RFHHFENG+CSC DYW
Sbjct: 714 IVVRDSTRFHHFENGSCSCKDYW 736
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 179/392 (45%), Gaps = 49/392 (12%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKD--------AMQLFDEMPECNDVVAST 54
RE G ++ L R V G C KD AM L + E D++ T
Sbjct: 40 REALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETRLLEF-DIILGT 98
Query: 55 VMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM---QRDN 111
+I Y +E A + F + K V W A+I G RNG+ AL ++++M +
Sbjct: 99 ALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEG 158
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
++P+ +T L AC+ +G + GR I + + IV ALINMYS+CG ++ A
Sbjct: 159 MKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESAR 218
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
+VF+ +K RDV +N++I+G A G + +A+E+F+ M +P VTF+G+L AC++
Sbjct: 219 KVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLE 278
Query: 232 LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSR-------------------------- 265
++ G I + + D G E + ++++ ++
Sbjct: 279 DLEQGRAIHRKVRED-GYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNIL 337
Query: 266 ------VGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR- 315
G+ ++A D M+ +AP+ I L ++LSAC + G + G+ + + R
Sbjct: 338 IVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRC 397
Query: 316 SADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
AD L N Y G + V + A +++
Sbjct: 398 KADVVLENSLMNMYNRCGSLDDTVGVFAAIRD 429
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 166/347 (47%), Gaps = 36/347 (10%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GREI + + G S+ + L+ +Y KCG + A ++FD + DV+A MI+ Y
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKN-RDVIAWNTMISGY 239
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ G A E+F R M ++ +PN VT +
Sbjct: 240 AKQGAATQALELFQR-------------------------------MGPNDPKPNVVTFI 268
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC-GDIDKALQVFEEMKE 179
+L+AC+ L LE GR IH + + + + ++G L+NMY++C +++A QVFE M+
Sbjct: 269 GLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRT 328
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
RDV T+N LI +G++ +A+++F++M + + P ++T VL+AC+ G G +
Sbjct: 329 RDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQG-KA 387
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
++ + + ++++ +R G ++ ++ + +L++A HG
Sbjct: 388 VHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIR-DKSLVSWSTLIAAYAQHG 446
Query: 300 KLQLG-EQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
+ G E + L + +AD T V +A + G KE VQ M
Sbjct: 447 HSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSM 493
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 139/257 (54%), Gaps = 8/257 (3%)
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
Y + G V +A VF ++ ++V WT ++ RNG AL +R M + +RP+
Sbjct: 2 YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHR-IDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
V + CS L+ G+ +H+ + + R ++ + I+G ALI MY+RC D++ A + F+EM
Sbjct: 62 VVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMG 121
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN---QGIRPTKVTFVGVLNACSHGGLVDL 235
++ + T+N+LIAG + +G A++++++M++ +G++P +TF L AC+ G +
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQ 181
Query: 236 GFEI-FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
G EI +++ Y + +++ ++++ S+ G E A +K D I +++S
Sbjct: 182 GREIEARTVASGYASDSIVQN--ALINMYSKCGSLESARKVFDRLK-NRDVIAWNTMISG 238
Query: 295 CKIHGKLQLGEQIAKRL 311
G ++ +R+
Sbjct: 239 YAKQGAATQALELFQRM 255
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 93/229 (40%), Gaps = 38/229 (16%)
Query: 160 MYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVT 219
MY +CG + AL VF ++ + ++ ++A A +G EA+ +R M+ +G+RP
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 220 FVGVLNACS-----------HGGLVD---LGFEI-----------------FQSMTRDYG 248
FV + CS H +++ L F+I T D
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 249 IEPQIEHYGCIVDLLSRVGRPEEAYDFITNM------KIAPDHIMLGSLLSACKIHGKLQ 302
+ + + ++ SR G A +M + PD I S L AC + G +
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180
Query: 303 LGEQI-AKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
G +I A+ + ++DS L N Y+ G + A ++ ++K V
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDV 229
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/558 (38%), Positives = 306/558 (54%), Gaps = 74/558 (13%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFK-------------------------- 35
G++IHGQ K G SN + LV +Y K G+
Sbjct: 104 GKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQ 163
Query: 36 -----DAMQLFDEMPECN----------------------------------------DV 50
+A+ +F EM +CN D+
Sbjct: 164 NGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDI 223
Query: 51 VASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD 110
V S + Y + GLVE A F+R++ + + W AMI G NG A+ LFREM
Sbjct: 224 VIS--LTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITK 281
Query: 111 NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
N+R + +T+ + A +Q+G+LEL RW+ Y+ K + V LI+MY++CG I A
Sbjct: 282 NIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLA 341
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
VF+ + ++DV ++ +I G +HG EA+ ++ EM G+ P TF+G+L AC +
Sbjct: 342 RCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNS 401
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGS 290
GLV G+E+F M D+GIEP +HY C+VDLL R G +AYDFI +M I P + G+
Sbjct: 402 GLVKEGWELFHLMP-DHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGA 460
Query: 291 LLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
LLSACKIH K++LGE A++L ++G YV LSN YAS+ W +R M + G+
Sbjct: 461 LLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGL 520
Query: 351 QKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIED 410
K+ G SSIE+N + F +GD HP+ ++I++++ L++ +K GY P E VLHD+
Sbjct: 521 NKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNH 580
Query: 411 WEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRD 470
E E L HSERLA+ YG+IST P TT+R+ KNLR C +CHS IKLI+ + R+II+RD
Sbjct: 581 EEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIRD 640
Query: 471 RNRFHHFENGTCSCGDYW 488
RFHHF++G CSCGD+W
Sbjct: 641 AKRFHHFKDGVCSCGDFW 658
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 120/245 (48%), Gaps = 4/245 (1%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
IN + G V A + F V D + W A+I G + + + ++ +MQ V PN
Sbjct: 25 FINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPN 84
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
T + VL AC +G+ IH K+ N V +L++MY++ G I A VF+
Sbjct: 85 CFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFD 144
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
++ +R V ++ S+I+G +G +EA+ +F+EM ++P + V V+ A ++ + DL
Sbjct: 145 KLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTN--VEDL 202
Query: 236 G-FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
G + + G+E + + + + ++ G E A F M+ P+ I+ +++S
Sbjct: 203 GQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRME-KPNLILWNAMISG 261
Query: 295 CKIHG 299
+G
Sbjct: 262 YANNG 266
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/441 (41%), Positives = 282/441 (63%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D T +++ Y + +E+A F R+ +D WT +I G + + +A+ FR+M
Sbjct: 286 DDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQM 345
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
QR+ ++PNE T+ LS CS + LE GR +H+ K + VG AL+++Y +CG +
Sbjct: 346 QREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCM 405
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+ A +F+ + RD+ ++N++I+G + HG+ +A+E FR M+++GI P + TF+GVL+AC
Sbjct: 406 EHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSAC 465
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
S GLV+ G + F SM++ YGI P IEHY C+VD+L R G+ E FI M + P ++
Sbjct: 466 SFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLI 525
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
++L ACK+HG + GE+ AK+L + +Y+LLSN +AS G+W + IRA M
Sbjct: 526 WETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTS 585
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
G++KEPGCS +EV+ ++H F+ D HP+ +IY K+ +L Q + GY P TEVVLH+
Sbjct: 586 RGIKKEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPKTEVVLHN 645
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
+ + EK L HSERLA+ + L+ST IR+ KNLR+C DCH +KLI++IT ++I+
Sbjct: 646 VSNKEKMEHLYYHSERLALSFALLSTNAVKPIRIFKNLRICEDCHDFMKLISDITNQEIV 705
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
VRD RFHHF+ GTCSC D W
Sbjct: 706 VRDIRRFHHFKRGTCSCQDRW 726
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 150/309 (48%), Gaps = 17/309 (5%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPEC---NDVVASTVMI 57
E E+ + + G R N+ T LV G+ + + + + +D + S +I
Sbjct: 135 EAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLI 194
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
Y++ VE+ +VF + D V W A++ G + R +F +M + +PN
Sbjct: 195 MMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMF 254
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T + VL +CS L E G+ +H+++ K+ D + VG AL++MY++ ++ A F+ +
Sbjct: 255 TFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRL 314
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
RD+ ++ +I+G A ++ +AV+ FR+M +GI+P + T L+ CSH ++ G
Sbjct: 315 VNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGR 374
Query: 238 EIFQSMTRDYGIEPQIEHYG------CIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSL 291
++ + + + H+G +VDL + G E A + I+ D + ++
Sbjct: 375 QL-------HAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGL-ISRDIVSWNTI 426
Query: 292 LSACKIHGK 300
+S HG+
Sbjct: 427 ISGYSQHGQ 435
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 146/342 (42%), Gaps = 69/342 (20%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+ +H L+ G + LV++Y KCG DA++
Sbjct: 69 EGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALK--------------------- 107
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
VF++++ D V W+AMI GL + G A +LF M+R RPN+ T+
Sbjct: 108 -----------VFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLS 156
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
++S + +G L G+ IH + K+ + +++V LI MY + ++ +VFE M
Sbjct: 157 SLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNP 216
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF--- 237
D+ ++N+L++G +F +M+ +G +P TF+ VL +CS L+D F
Sbjct: 217 DLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCS--SLLDPEFGKQ 274
Query: 238 ---EIFQSMTRD-----------YGIEPQIEHYGCIVDLL---------------SRVGR 268
I ++ + D Y +E G D L ++ +
Sbjct: 275 VHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQ 334
Query: 269 PEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQI 307
E+A + M+ I P+ L S LS C L+ G Q+
Sbjct: 335 AEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQL 376
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 124/232 (53%), Gaps = 8/232 (3%)
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
+E A +F + K+ V W A+++G + G+ + L LF +M+ + ++ T+ VL
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 126 CSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTY 185
C+ G+L G+ +H+ + +++ +G +L++MYS+CG + AL+VF +++ DV +
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 186 NSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR 245
+++I GL G EA E+F M +G RP + T +++ ++ G + G I + +
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180
Query: 246 DYGIEPQ--IEHYGCIVDLLSR-VGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
YG E + + ++ + SR V + ++ +TN PD + +LLS
Sbjct: 181 -YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTN----PDLVSWNALLSG 227
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/489 (40%), Positives = 293/489 (59%), Gaps = 14/489 (2%)
Query: 8 QVLKLGLRSNRST-----RLKLVELYGKCGEFKDAMQLFDEMPEC---NDVVASTVMINC 59
Q+L+ G N T + E G CG QL +C ++V + +++
Sbjct: 151 QMLRFGYSPNEFTLSSVIKAAAAERRGCCGH-----QLHGFCVKCGFDSNVHVGSALLDL 205
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
Y +GL+++A VF ++ ++ V W A+I G R +AL+LF+ M RD RP+ +
Sbjct: 206 YTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSY 265
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+ ACS G LE G+W+H+YM K L G L++MY++ G I A ++F+ + +
Sbjct: 266 ASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAK 325
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
RDV ++NSL+ A HG EAV F EM GIRP +++F+ VL ACSH GL+D G+
Sbjct: 326 RDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHY 385
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
++ M +D GI P+ HY +VDLL R G A FI M I P + +LL+AC++H
Sbjct: 386 YELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHK 444
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+LG A+ + + D G +V+L N YAS G+W +A ++R KMKE+GV+KEP CS +
Sbjct: 445 NTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWV 504
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E+ N IH F+ D RHPQRE+I +K +E+ +K GY P T V+ ++ E+E L
Sbjct: 505 EIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQY 564
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE++A+ + L++T P +TI + KN+RVC DCH+ IKL + + R+IIVRD NRFHHF++
Sbjct: 565 HSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKD 624
Query: 480 GTCSCGDYW 488
G CSC DYW
Sbjct: 625 GNCSCKDYW 633
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 142/304 (46%), Gaps = 36/304 (11%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D+V ++N Y + G +E A +VF ++ +D V WT +I G ++ AL F +M
Sbjct: 93 HDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQM 152
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
R PNE T+ V+ A + G +H + K D N VG AL+++Y+R G +
Sbjct: 153 LRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLM 212
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
D A VF+ ++ R+ ++N+LIAG A + +A+E+F+ M+ G RP+ ++ + AC
Sbjct: 213 DDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGAC 272
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
S G ++ G + M + E+ F N +
Sbjct: 273 SSTGFLEQGKWVHAYMIKS----------------------GEKLVAFAGN-------TL 303
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
L + IH ++ +++AKR D ++ L AYA G KEAV +M+
Sbjct: 304 LDMYAKSGSIHDARKIFDRLAKR-------DVVSWNSLLTAYAQHGFGKEAVWWFEEMRR 356
Query: 348 AGVQ 351
G++
Sbjct: 357 VGIR 360
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 119/266 (44%), Gaps = 40/266 (15%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L C+ L GR +H+++ + + ++G L+NMY++CG +++A +VFE+M +RD
Sbjct: 66 LLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRD 125
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HG 230
T+ +LI+G + H R +A+ F +M+ G P + T V+ A + HG
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHG 185
Query: 231 GLVDLGFE--------IFQSMTRDYGIEPQIE------------HYGCIVDLLSRVGRPE 270
V GF+ + TR YG+ + + ++ +R E
Sbjct: 186 FCVKCGFDSNVHVGSALLDLYTR-YGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTE 244
Query: 271 EAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRS---ADSGTYVL 324
+A + M P H SL AC G L+ G+ + ++ A +G +L
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLL 304
Query: 325 LSNAYASSGKWKEAVQIRAKMKEAGV 350
+ YA SG +A +I ++ + V
Sbjct: 305 --DMYAKSGSIHDARKIFDRLAKRDV 328
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 37/198 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ +H ++K G + L+++Y K G DA ++FD + + DVV+ ++ Y
Sbjct: 280 QGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAK-RDVVSWNSLLTAY 338
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+HG K+ V W F EM+R +RPNE++ +
Sbjct: 339 AQHGF------------GKEAVWW-------------------FEEMRRVGIRPNEISFL 367
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRI--DLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
VL+ACS G L+ G + M K I + H V ++++ R GD+++AL+ EEM
Sbjct: 368 SVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYV--TVVDLLGRAGDLNRALRFIEEMP 425
Query: 179 -ERDVTTYNSLIAGLAMH 195
E + +L+ MH
Sbjct: 426 IEPTAAIWKALLNACRMH 443
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/462 (43%), Positives = 281/462 (60%), Gaps = 2/462 (0%)
Query: 28 YGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAM 87
Y G ++A LFD MP VV MI + +G V+ A VF +K +D W+AM
Sbjct: 251 YTHSGRMREASSLFDAMP-VKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAM 309
Query: 88 IDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRI 147
I R G AL LFR MQR+ + N +++ VLS C L +L+ G+ +H+ + +
Sbjct: 310 IKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEF 369
Query: 148 DLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
D + V LI MY +CG++ +A QVF +DV +NS+I G + HG EA+ +F +
Sbjct: 370 DQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHD 429
Query: 208 MINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
M + G+ P VTF+GVL+ACS+ G V G E+F++M Y +EP IEHY C+VDLL R
Sbjct: 430 MCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRAD 489
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSN 327
+ EA + M + PD I+ G+LL AC+ H KL L E ++L ++G YVLLSN
Sbjct: 490 QVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSN 549
Query: 328 AYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIR-HPQREQIYKKMQ 386
YA G+W++ +R K+K V K PGCS IEV ++H F GD + HP++ I K ++
Sbjct: 550 MYAYKGRWRDVEVLREKIKARSVTKLPGCSWIEVEKKVHMFTGGDSKGHPEQPIIMKMLE 609
Query: 387 ELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLR 446
+L +++ GY P VLHD+++ EK +L HSE+LA+ YGL+ IRV+KNLR
Sbjct: 610 KLGGLLREAGYCPDGSFVLHDVDEEEKTHSLGYHSEKLAVAYGLLKVPEGMPIRVMKNLR 669
Query: 447 VCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
VC DCHS IKLIA +T R+II+RD NRFHHF++G CSC DYW
Sbjct: 670 VCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGHCSCKDYW 711
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 156/329 (47%), Gaps = 21/329 (6%)
Query: 32 GEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGL 91
G DA +LFD MPE DVVA T MI Y E G ++ A +F + ++ V WTAM+ G
Sbjct: 162 GRVDDARKLFDMMPE-KDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGY 220
Query: 92 VRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG-KHRIDLN 150
RNG++ A LF M NEV+ +L + G + + M K + N
Sbjct: 221 ARNGKVDVARKLFEVMPER----NEVSWTAMLLGYTHSGRMREASSLFDAMPVKPVVVCN 276
Query: 151 HIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
++ G +N G++DKA +VF+ MKERD T++++I G +EA+ +FR M
Sbjct: 277 EMIMGFGLN-----GEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQR 331
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
+G+ + + VL+ C +D G ++ + R + + ++ + + G
Sbjct: 332 EGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSE-FDQDLYVASVLITMYVKCGNLV 390
Query: 271 EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD-CRSA---DSGTYVLLS 326
A + D +M S+++ HG LGE+ D C S D T++ +
Sbjct: 391 RAKQVFNRFPLK-DVVMWNSMITGYSQHG---LGEEALNVFHDMCSSGVPPDDVTFIGVL 446
Query: 327 NAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
+A + SGK KE +++ MK Q EPG
Sbjct: 447 SACSYSGKVKEGLELFETMK-CKYQVEPG 474
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 163/350 (46%), Gaps = 47/350 (13%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
+V Y + + ++A+ LF++MP+ N V+ +I+ ++++G++ A VF + ++ V
Sbjct: 61 MVAAYFEARQPREALLLFEKMPQRN-TVSWNGLISGHIKNGMLSEARRVFDTMPDRNVVS 119
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
WT+M+ G VRNG++A A LF M NV V+ +L Q G ++ R + M
Sbjct: 120 WTSMVRGYVRNGDVAEAERLFWHMPHKNV----VSWTVMLGGLLQEGRVDDARKLFDMMP 175
Query: 144 -KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAV 202
K + + +++GG Y G +D+A +F+EM +R+V T+ ++++G A +G+ A
Sbjct: 176 EKDVVAVTNMIGG-----YCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVAR 230
Query: 203 EMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT-----------RDYGIEP 251
++F M + +V++ +L +H G + +F +M +G+
Sbjct: 231 KLFEVMPER----NEVSWTAMLLGYTHSGRMREASSLFDAMPVKPVVVCNEMIMGFGLNG 286
Query: 252 QIEH---------------YGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLS 293
+++ + ++ + R G EA M+ +A + L S+LS
Sbjct: 287 EVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLS 346
Query: 294 ACKIHGKLQLGEQIAKRLLDCRSADSGTYV--LLSNAYASSGKWKEAVQI 341
C L G+Q+ +L+ D YV +L Y G A Q+
Sbjct: 347 VCVSLASLDHGKQVHAQLVRS-EFDQDLYVASVLITMYVKCGNLVRAKQV 395
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 160/354 (45%), Gaps = 29/354 (8%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKL-VELYGKCGEFKDAMQLFDEMPECNDVVAS-TVMINC 59
GR I + + L +R +T + Y + G+ A ++FDE P + V+S M+
Sbjct: 5 GRAILRRCMMLQVRLQCTTSSSYAIACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAA 64
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
Y E A +F ++ ++TV W +I G ++NG ++ A +F M NV V+
Sbjct: 65 YFEARQPREALLLFEKMPQRNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNV----VSW 120
Query: 120 VCVLSACSQLGALELGRWIHSYMG-KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
++ + G + + +M K+ + ++GG L + G +D A ++F+ M
Sbjct: 121 TSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLGGLL-----QEGRVDDARKLFDMMP 175
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
E+DV ++I G GR EA +F EM + + VT+ +++ + G VD+ +
Sbjct: 176 EKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNV----VTWTAMVSGYARNGKVDVARK 231
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLL--SRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
+F+ M P+ LL + GR EA M + P ++ ++
Sbjct: 232 LFEVM-------PERNEVSWTAMLLGYTHSGRMREASSLFDAMPVKPV-VVCNEMIMGFG 283
Query: 297 IHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
++G++ ++ K + + D+GT+ + Y G EA+ + +M+ G+
Sbjct: 284 LNGEVDKARRVFKGM---KERDNGTWSAMIKVYERKGYELEALGLFRRMQREGL 334
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 34/196 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H Q+++ + L+ +Y KCG A Q+F+ P DVV MI Y
Sbjct: 357 GKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFP-LKDVVMWNSMITGYS 415
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+HGL E AL++F +M V P++VT +
Sbjct: 416 QHGLGEE-------------------------------ALNVFHDMCSSGVPPDDVTFIG 444
Query: 122 VLSACSQLGALELGRWIHSYMG-KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VLSACS G ++ G + M K++++ L+++ R +++A+++ E+M E
Sbjct: 445 VLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPME 504
Query: 180 RDVTTYNSLIAGLAMH 195
D + +L+ H
Sbjct: 505 PDAIVWGALLGACRTH 520
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/487 (40%), Positives = 293/487 (60%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +++ V+K+ L S L+ +Y +CG ++A + FD + E N +V+ ++N Y
Sbjct: 269 GEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKN-LVSYNTIVNAYA 327
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ E AFE LF E++ N T
Sbjct: 328 KSLNSEEAFE-------------------------------LFNEIEGAGTGVNAFTFAS 356
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+LS S +GA+ G IHS + K N + ALI+MYSRCG+I+ A QVF EM + +
Sbjct: 357 LLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGN 416
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ S+I G A HG + A+E F +M+ G+ P +VT++ VL+ACSH GL+ G + F+
Sbjct: 417 VISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFK 476
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM ++GI P++EHY C+VDLL R G EEA + + +M D ++L + L AC++HG +
Sbjct: 477 SMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNM 536
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
LG+ A+ +L+ D Y+LLSN +AS+G+W+E +IR KMKE + KE GCS IEV
Sbjct: 537 DLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEV 596
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N++H+F +GD HPQ ++IY ++ +L +K GY PST+ VLHD+E+ +KE L HS
Sbjct: 597 ENKVHKFYVGDTSHPQAQEIYDELDQLALKIKELGYIPSTDFVLHDVEEEQKEQYLFQHS 656
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E++A+ YG IST IRV KNLRVC DCH+ K + + +++I++RD NRFHHF++GT
Sbjct: 657 EKIAVAYGFISTSTSRPIRVFKNLRVCGDCHTAFKYFSIVRRKEIVLRDANRFHHFKDGT 716
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 717 CSCNDYW 723
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 166/347 (47%), Gaps = 33/347 (9%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+ H V+K GL + LV++Y KC V
Sbjct: 164 GRQFHCLVMKSGLDLDVCVGCSLVDMYAKC-----------------------------V 194
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMAR-ALDLFREMQRDNVRPNEVTIV 120
G V++A +VF R+ V + + WTA+I G V++G R A++LF EM + V+PN T
Sbjct: 195 ADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFS 254
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL AC+ L + LG +++ + K R+ + VG +LI+MYSRCG+++ A + F+ + E+
Sbjct: 255 SVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEK 314
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
++ +YN+++ A S EA E+F E+ G TF +L+ S G + G +I
Sbjct: 315 NLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIH 374
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ + G + + ++ + SR G E A+ M + I S+++ HG
Sbjct: 375 SRILKS-GFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDG-NVISWTSMITGFAKHGF 432
Query: 301 LQLGEQIAKRLLDCR-SADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
+ ++L+ S + TY+ + +A + G E ++ MK
Sbjct: 433 ATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMK 479
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 165/343 (48%), Gaps = 41/343 (11%)
Query: 48 NDVVASTVMINCYVE-HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
+DV +I+ +V+ +G +E+A++VF R+ ++ V WT MI + G A+DLF +
Sbjct: 76 SDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLD 135
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC-- 164
M P+ T+ V+SAC+++G L LGR H + K +DL+ VG +L++MY++C
Sbjct: 136 MVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVA 195
Query: 165 -GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR-SIEAVEMFREMINQGIRPTKVTFVG 222
G +D A +VF+ M +V ++ ++I G G EA+E+F EM+ ++P TF
Sbjct: 196 DGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSS 255
Query: 223 VLNACSHGGLVDLGFEIFQSMTR------------------------------DYGIEPQ 252
VL AC++ + LG +++ + + D E
Sbjct: 256 VLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKN 315
Query: 253 IEHYGCIVDLLSRVGRPEEAYDFITNMKIAP---DHIMLGSLLSACKIHGKLQLGEQIAK 309
+ Y IV+ ++ EEA++ ++ A + SLLS G + GEQI
Sbjct: 316 LVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHS 375
Query: 310 RLLDCRSADSGTYV--LLSNAYASSGKWKEAVQIRAKMKEAGV 350
R+L S ++ L + Y+ G + A Q+ +M + V
Sbjct: 376 RILK-SGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNV 417
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 126/280 (45%), Gaps = 43/280 (15%)
Query: 79 KDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWI 138
+D V W+A+I N + A+ F +M PNE V ACS + LG+ I
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64
Query: 139 HSYMGKH-RIDLNHIVGGALINMYSRC-GDIDKALQVFEEMKERDVTTYNSLIAGLAMHG 196
++ K + + VG ALI+M+ + GD++ A +VF+ M +R+V T+ +I G
Sbjct: 65 FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLG 124
Query: 197 RSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHY 256
S +AV++F +M+ G P + T GV++AC+ GL+ LG + F + G++ +
Sbjct: 125 FSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQ-FHCLVMKSGLDLDV-CV 182
Query: 257 GC-IVDLLSRV-----------------------------------GRPEEAYDFITNM- 279
GC +VD+ ++ G EA + M
Sbjct: 183 GCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMV 242
Query: 280 --KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSA 317
++ P+H S+L AC + LGEQ+ ++ R A
Sbjct: 243 QGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLA 282
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 34/198 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G +IH ++LK G +SN L+ +Y +CG + A Q+F+EM + N V++ T MI +
Sbjct: 369 KGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGN-VISWTSMITGF 427
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+HG RAL+ F +M V PNEVT +
Sbjct: 428 AKHGFA-------------------------------TRALETFHKMLEAGVSPNEVTYI 456
Query: 121 CVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
VLSACS +G + G + S +H I ++++ R G +++A+++ M
Sbjct: 457 AVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPF 516
Query: 179 ERDVTTYNSLIAGLAMHG 196
+ D + + +HG
Sbjct: 517 KADALVLRTFLGACRVHG 534
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 68/164 (41%), Gaps = 35/164 (21%)
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
+RD+ ++++LI+ A + ++ EA+ F +M+ G P + F GV ACS+ + LG
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDL--------------------------------LSRV 266
IF + + E + ++D+ ++
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123
Query: 267 GRPEEAYDFITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQI 307
G +A D +M ++ PD L ++SAC G L LG Q
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQF 167
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/488 (41%), Positives = 291/488 (59%), Gaps = 33/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG +H ++++GL SN S L+ +Y KC A +FDE+
Sbjct: 280 EGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDR-------------- 325
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ V W AMI G +NG A+ LF MQ +NV+P+ T+V
Sbjct: 326 ------------------RTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLV 367
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+ A + + RWIH Y + +D + V ALI+MY++CG ++ A +F +ER
Sbjct: 368 SVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARER 427
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
V T+N++I G HG AVE+F EM + GI P + TF+ VL+ACSH GLVD G E F
Sbjct: 428 HVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYF 487
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM DYG+EP +EHYG +VDLL R G+ +EA+ FI M + P + G++L ACK+H
Sbjct: 488 TSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKN 547
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++L E+ A+++ + + +VLL+N YA++ WK+ ++R M++ G+QK PG S I+
Sbjct: 548 VELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQ 607
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+ NEIH F G H Q ++IY ++ +L + +K GY P T+ + HD+ED K L H
Sbjct: 608 LKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTH 666
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI +GLI T P TTI++ KNLRVCNDCH+ KLI+ +T R+II+RD RFHHF++G
Sbjct: 667 SEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDG 726
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 727 KCSCGDYW 734
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 153/348 (43%), Gaps = 50/348 (14%)
Query: 50 VVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
V +T +++ Y + G + A VF + K++V W AMIDG +NG+ AL LF M
Sbjct: 196 VNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVE 255
Query: 110 DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDK 169
+ V +V+++ L AC +LG L+ G +H + + +D N V ALI MYS+C +D
Sbjct: 256 EGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDL 315
Query: 170 ALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH 229
A VF+E+ R ++N++I G A +G S +AV +F M + ++P T V V+ A
Sbjct: 316 ASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPA--- 372
Query: 230 GGLVDLGFEIFQSMTRDYGIEPQIEH----YGCIVDLLSRVGRPE--------------- 270
L D+ + Y I ++ ++D+ ++ GR
Sbjct: 373 --LADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVI 430
Query: 271 -------------------EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
E ++ + ++ I P+ S+LSAC G + G + +
Sbjct: 431 TWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSM 490
Query: 312 LDCRSADSGT--YVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
+ + G Y + + +GK EA KM +PG S
Sbjct: 491 KEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMP-----MDPGLS 533
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 122/226 (53%), Gaps = 2/226 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
++ +A+T + N Y + +A VF R+ V+D V W A++ G RNG A+++ M
Sbjct: 92 SEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRM 151
Query: 108 QRD-NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
Q + RP+ +T+V VL AC+ AL R H++ + ++ V A+++ Y +CGD
Sbjct: 152 QEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGD 211
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
I A VF+ M ++ ++N++I G A +G S EA+ +F M+ +G+ T V+ + L A
Sbjct: 212 IRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQA 271
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
C G +D G + + + R G++ + ++ + S+ R + A
Sbjct: 272 CGELGCLDEGMRVHELLVR-IGLDSNVSVMNALITMYSKCKRVDLA 316
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Query: 96 EMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGG 155
++ AL F M P T +L C+ G L GR +H+ + ID +
Sbjct: 39 DLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAAT 98
Query: 156 ALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI-NQGIR 214
AL NMY++C A +VF+ M RD +N+L+AG A +G + A+EM M +G R
Sbjct: 99 ALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGER 158
Query: 215 PTKVTFVGVL 224
P +T V VL
Sbjct: 159 PDSITLVSVL 168
>gi|297811673|ref|XP_002873720.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319557|gb|EFH49979.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/499 (39%), Positives = 315/499 (63%), Gaps = 17/499 (3%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G + HG +K+G ++ L+++YGKCG + ++F + E VV+ TV+++ V
Sbjct: 130 GEQGHGVAVKMGFLTSVKVCNALMDMYGKCGFVSEVKRIFQALEE-KSVVSWTVVLDTLV 188
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ-RDNVRPNEVTIV 120
+ ++ EVF + ++ V WT M+ G + G L+L EM R N VT+
Sbjct: 189 KWEGLKRGREVFDEMPERNVVAWTLMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLC 248
Query: 121 CVLSACSQLGALELGRWIHSY-------MGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
+LSAC+Q G L +GRW+H Y MG+ +VG AL++MY++CG+ID +++V
Sbjct: 249 SMLSACAQSGNLVIGRWVHVYALKKAMMMGEEETYDGVMVGTALVDMYAKCGNIDSSIKV 308
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV 233
F M++R+V T+N+L +GLAMHG+ ++MF EM+ + ++P +TF +L+ACSH G+V
Sbjct: 309 FRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPEMVRE-VKPDDLTFTALLSACSHLGMV 367
Query: 234 DLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLS 293
D G+ F S+ + YG+EP+++HY C+VD+L R GR EEA + M + P+ ++LGSLL
Sbjct: 368 DEGWRCFHSL-QFYGLEPKVDHYACMVDILGRAGRIEEAEILMREMPVPPNEVVLGSLLG 426
Query: 294 ACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
+C +HGKL++ E+I + L+ + +L+SN Y + G+ A +R ++ G++K
Sbjct: 427 SCSVHGKLEIAERIKRELIQMSPGHTEYQILMSNMYVAEGRSDIADGLRGSLRNRGIRKI 486
Query: 354 PGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH----DIE 409
PG SSI VN+ +H F GD HP+ +++Y K+ E+ + ++ GY P ++ D+E
Sbjct: 487 PGLSSIYVNDSVHRFSSGDRSHPRTKEVYLKLNEVIERIRSAGYVPDISGLVSPSEGDLE 546
Query: 410 DWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVR 469
EKE AL HSE+LA+C+GL+ TKP T + V KNLR+C DCHS +K+++ + R+II+R
Sbjct: 547 --EKEQALCCHSEKLAVCFGLLETKPRTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIR 604
Query: 470 DRNRFHHFENGTCSCGDYW 488
DRNRFH F+ G+CSC DYW
Sbjct: 605 DRNRFHQFKGGSCSCSDYW 623
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 157/392 (40%), Gaps = 71/392 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLK--LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINC 59
GRE+H + GL+ + L L + Y GE A +LFDE+P +
Sbjct: 25 GRELHAVLTTSGLKKAPRSYLSNALFQFYASSGEIATAQKLFDEIPLSD----------- 73
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
KD V WT ++ R G + ++ LF EM+R V + V++
Sbjct: 74 -------------------KDNVDWTTLLSSFSRFGLLVNSMKLFVEMRRKRVEIDHVSL 114
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG-------------- 165
VC+ C++L L G H K + V AL++MY +CG
Sbjct: 115 VCLFGVCAKLEDLRFGEQGHGVAVKMGFLTSVKVCNALMDMYGKCGFVSEVKRIFQALEE 174
Query: 166 -----------------DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM 208
+ + +VF+EM ER+V + ++AG G + E +E+ EM
Sbjct: 175 KSVVSWTVVLDTLVKWEGLKRGREVFDEMPERNVVAWTLMVAGYLGAGFTREVLELLAEM 234
Query: 209 INQ-GIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYG------CIVD 261
+ + G VT +L+AC+ G + +G + + + + E Y +VD
Sbjct: 235 VFRCGHGLNFVTLCSMLSACAQSGNLVIGRWVHVYALKKAMMMGEEETYDGVMVGTALVD 294
Query: 262 LLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT 321
+ ++ G + + M+ + + +L S +HGK ++ + ++ D T
Sbjct: 295 MYAKCGNIDSSIKVFRLMR-KRNVVTWNALFSGLAMHGKGRMVIDMFPEMVREVKPDDLT 353
Query: 322 YVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
+ L +A + G E + ++ G++ +
Sbjct: 354 FTALLSACSHLGMVDEGWRCFHSLQFYGLEPK 385
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/488 (41%), Positives = 288/488 (59%), Gaps = 33/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR +H ++++GL SN + L+ +Y KC A Q+FDE+
Sbjct: 446 EGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDEL---------------- 489
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
K V W AMI G +NG A+ LF MQ +NV+P+ T+V
Sbjct: 490 ----------------GYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLV 533
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
++ A + + RWIH Y + +D + V ALI+MY++CG + A +F ++R
Sbjct: 534 SIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDR 593
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
V T+N++I G HG AVE+F EM + G P + TF+ VL+ACSH GLVD G E F
Sbjct: 594 HVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYF 653
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM DYG+EP +EHYG +VDLL R G+ EA+ FI M + P + G++L ACK+H
Sbjct: 654 SSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKN 713
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++L E+ A+R+ + + +VLL+N YA++ WK+ ++R M++ G+QK PG S ++
Sbjct: 714 VELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTAMEKKGLQKTPGWSIVQ 773
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+ NEIH F G H Q + IY ++ +L + +K GY P T+ + HD+ED K L H
Sbjct: 774 LKNEIHTFYSGSTNHQQAKDIYARLAKLIEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTH 832
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI YGLI T P TTI++ KNLRVC DCH+ KLI+ +T R+II+RD RFHHF++G
Sbjct: 833 SEKLAIAYGLIRTAPGTTIQIKKNLRVCKDCHNATKLISLVTGREIIMRDIQRFHHFKDG 892
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 893 KCSCGDYW 900
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 152/306 (49%), Gaps = 9/306 (2%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
+ +A+T + N Y + +A VF R+ +D V W A++ G RNG A+ + MQ
Sbjct: 259 EALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQ 318
Query: 109 -RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
D RP+ VT+V VL AC+ AL R +H++ + D V A++++Y +CG +
Sbjct: 319 EEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAV 378
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
D A +VF+ M++R+ ++N++I G A +G + EA+ +F+ M+ +G+ T V+ + L+AC
Sbjct: 379 DSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHAC 438
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
G +D G + + + R G+E + ++ + + R + A + +
Sbjct: 439 GELGFLDEGRRVHELLVR-IGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYK-TRVS 496
Query: 288 LGSLLSACKIHGKLQLGEQIAKRL-LDCRSADSGTYVLLSNAYAS-----SGKWKEAVQI 341
+++ C +G + ++ R+ L+ DS T V + A A +W I
Sbjct: 497 WNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSI 556
Query: 342 RAKMKE 347
R + +
Sbjct: 557 RLHLDQ 562
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 128/263 (48%), Gaps = 31/263 (11%)
Query: 32 GEFKDAMQLFDEMPECNDVVA----------------------STVMINCYVEHGLVENA 69
GE DA+ L +P C D A ST +++ Y + G V++A
Sbjct: 322 GERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSA 381
Query: 70 FEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQL 129
+VF ++ +++V W AMI G NG+ AL LF+ M + V +V+++ L AC +L
Sbjct: 382 RKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGEL 441
Query: 130 GALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLI 189
G L+ GR +H + + ++ N V ALI MY +C D A QVF+E+ + ++N++I
Sbjct: 442 GFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMI 501
Query: 190 AGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGI 249
G +G S +AV +F M + ++P T V ++ A L D+ + Y I
Sbjct: 502 LGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPA-----LADISDPLQARWIHGYSI 556
Query: 250 EPQIEH----YGCIVDLLSRVGR 268
++ ++D+ ++ GR
Sbjct: 557 RLHLDQDVYVLTALIDMYAKCGR 579
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 2/164 (1%)
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T +L C+ L GR +H+ + + + AL NMY++C A +VF+ M
Sbjct: 227 TFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRM 286
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ-GIRPTKVTFVGVLNACSHGGLVDLG 236
RD +N+L+AG A +G + AV M M + G RP VT V VL AC+ +
Sbjct: 287 PARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGAC 346
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
E+ R G + Q+ I+D+ + G + A M+
Sbjct: 347 REVHAFAVRG-GFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQ 389
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/488 (41%), Positives = 291/488 (59%), Gaps = 33/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG +H ++++GL SN S L+ +Y KC A +FDE+
Sbjct: 280 EGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDR-------------- 325
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ V W AMI G +NG A+ LF MQ +NV+P+ T+V
Sbjct: 326 ------------------RTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLV 367
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+ A + + RWIH Y + +D + V ALI+MY++CG ++ A +F +ER
Sbjct: 368 SVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARER 427
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
V T+N++I G HG AVE+F EM + GI P + TF+ VL+ACSH GLVD G E F
Sbjct: 428 HVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYF 487
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM DYG+EP +EHYG +VDLL R G+ +EA+ FI M + P + G++L ACK+H
Sbjct: 488 TSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKN 547
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++L E+ A+++ + + +VLL+N YA++ WK+ ++R M++ G+QK PG S I+
Sbjct: 548 VELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQ 607
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+ NEIH F G H Q ++IY ++ +L + +K GY P T+ + HD+ED K L H
Sbjct: 608 LKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTH 666
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI +GLI T P TTI++ KNLRVCNDCH+ KLI+ +T R+II+RD RFHHF++G
Sbjct: 667 SEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDG 726
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 727 KCSCGDYW 734
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 153/348 (43%), Gaps = 50/348 (14%)
Query: 50 VVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
V +T +++ Y + G + A VF + K++V W AMIDG +NG+ AL LF M
Sbjct: 196 VNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVE 255
Query: 110 DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDK 169
+ V +V+++ L AC +LG L+ G +H + + +D N V ALI MYS+C +D
Sbjct: 256 EGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDL 315
Query: 170 ALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH 229
A VF+E+ R ++N++I G A +G S +AV +F M + ++P T V V+ A
Sbjct: 316 ASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPA--- 372
Query: 230 GGLVDLGFEIFQSMTRDYGIEPQIEH----YGCIVDLLSRVGRPE--------------- 270
L D+ + Y I ++ ++D+ ++ GR
Sbjct: 373 --LADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVI 430
Query: 271 -------------------EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
E ++ + ++ I P+ S+LSAC G + G + +
Sbjct: 431 TWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSM 490
Query: 312 LDCRSADSGT--YVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
+ + G Y + + +GK EA KM +PG S
Sbjct: 491 KEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMP-----MDPGLS 533
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 122/226 (53%), Gaps = 2/226 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
++ +A+T + N Y + +A VF R+ V+D V W A++ G RNG A+++ M
Sbjct: 92 SEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRM 151
Query: 108 QRD-NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
Q + RP+ +T+V VL AC+ AL R H++ + ++ V A+++ Y +CGD
Sbjct: 152 QEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGD 211
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
I A VF+ M ++ ++N++I G A +G S EA+ +F M+ +G+ T V+ + L A
Sbjct: 212 IRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQA 271
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
C G +D G + + + R G++ + ++ + S+ R + A
Sbjct: 272 CGELGCLDEGMRVHELLVR-IGLDSNVSVMNALITMYSKCKRVDLA 316
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Query: 96 EMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGG 155
++ AL F M P T +L C+ G L GR +H+ + ID +
Sbjct: 39 DLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAAT 98
Query: 156 ALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI-NQGIR 214
AL NMY++C A +VF+ M RD +N+L+AG A +G + A+EM M +G R
Sbjct: 99 ALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGER 158
Query: 215 PTKVTFVGVL 224
P +T V VL
Sbjct: 159 PDSITLVSVL 168
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/436 (44%), Positives = 280/436 (64%), Gaps = 1/436 (0%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
T ++ Y + G E+A +F ++ KD V W+AM+ + G+ A LF +M ++
Sbjct: 439 TALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIK 498
Query: 114 PNEVTIVCVLSACSQLGA-LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
PNE TI V+ AC+ A ++ GR H+ K+R V AL++MYSR G+ID A
Sbjct: 499 PNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQI 558
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
VFE +RD+ ++NS+I+G A HG S++A+E FR+M GI+ VTF+ V+ C+H GL
Sbjct: 559 VFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGL 618
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
V G + F SM RD+ I P +EHY C+VDL SR G+ +E I +M ++ +LL
Sbjct: 619 VVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLL 678
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
AC++H ++LG+ A +LL DS TYVLLSN YA++GKWKE ++R M V+K
Sbjct: 679 GACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKK 738
Query: 353 EPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE 412
E GCS I++ N++H FI D HP +QIYKK++ + +K +GYSP+T VLHDI + +
Sbjct: 739 EAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQ 798
Query: 413 KEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRN 472
KE L HSERLA+ +GLI+T P T +++VKNLRVC DCH ++K+++ I R+II+RD +
Sbjct: 799 KEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCS 858
Query: 473 RFHHFENGTCSCGDYW 488
RFHHF G CSCGD+W
Sbjct: 859 RFHHFNGGACSCGDFW 874
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 148/304 (48%), Gaps = 9/304 (2%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
+V A T +++ Y++ G V EVF + K+ V WT+++ G + + LF M+
Sbjct: 134 EVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMR 193
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ + PN T VLSA + GAL+LG+ +H+ K + V +L+NMY++CG ++
Sbjct: 194 AEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVE 253
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A VF M+ RD+ ++N+L+AGL ++ +EA+++F E + T+ T+ V+ C+
Sbjct: 254 DAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCA 313
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
+ + L ++ S +G + D S+ G +A + + + + +
Sbjct: 314 NLKQLALARQL-HSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSW 372
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+++S C +G + L + R+ + R ++ N + S K ++ I A
Sbjct: 373 TAIISGCIQNGDIPLAVVLFSRMREDR--------VMPNEFTYSAMLKASLSILPPQIHA 424
Query: 349 GVQK 352
V K
Sbjct: 425 QVIK 428
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 135/299 (45%), Gaps = 38/299 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
R++H VLK G + L + Y KCGE DA+
Sbjct: 321 ARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADAL----------------------- 357
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
N F + + ++ V WTA+I G ++NG++ A+ LF M+ D V PNE T
Sbjct: 358 ------NIFSMTT--GSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSA 409
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L A + L IH+ + K VG AL+ YS+ G + AL +F+ ++++D
Sbjct: 410 MLKASLSI----LPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKD 465
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-HGGLVDLGFEIF 240
V ++++++ A G A +F +M QGI+P + T V++AC+ VD G + F
Sbjct: 466 VVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQ-F 524
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+++ Y I +V + SR G + A + + D + S++S HG
Sbjct: 525 HAISIKYRYHDAICVSSALVSMYSRKGNIDSA-QIVFERQTDRDLVSWNSMISGYAQHG 582
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 101/226 (44%), Gaps = 33/226 (14%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H Q +K G RS+ L+ +Y KCG
Sbjct: 220 GQRVHAQSVKFGCRSSVFVCNSLMNMYAKCG----------------------------- 250
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
LVE+A VF+ ++ +D V W ++ GL N AL LF E + + + T
Sbjct: 251 ---LVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYAT 307
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE-EMKER 180
V+ C+ L L L R +HS + KH L V AL + YS+CG++ AL +F R
Sbjct: 308 VIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSR 367
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+V ++ ++I+G +G AV +F M + P + T+ +L A
Sbjct: 368 NVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA 413
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 7/217 (3%)
Query: 92 VRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH 151
R G + LD F +R V + T+ CVL AC + LG +H K D
Sbjct: 75 ARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGE 134
Query: 152 IVGG-ALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
+ G +L++MY +CG + + ++VFE M +++V T+ SL+ G A E + +F M
Sbjct: 135 VSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRA 194
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
+GI P TF VL+A + G +DLG + + + +G + ++++ ++ G E
Sbjct: 195 EGIWPNPFTFASVLSAVASQGALDLGQRV-HAQSVKFGCRSSVFVCNSLMNMYAKCGLVE 253
Query: 271 EAYDFITNMK----IAPDHIMLGSLLSACKIHGKLQL 303
+A M+ ++ + +M G L+ C++ LQL
Sbjct: 254 DAKSVFNWMETRDMVSWNTLMAGLQLNECELEA-LQL 289
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 72/131 (54%), Gaps = 1/131 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+ + S+ +++ Y G +++A VF R +D V W +MI G ++G +A++ FR+M
Sbjct: 535 DAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQM 594
Query: 108 QRDNVRPNEVTIVCVLSACSQLG-ALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
+ ++ + VT + V+ C+ G +E ++ S + H+I+ ++++YSR G
Sbjct: 595 EASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGK 654
Query: 167 IDKALQVFEEM 177
+D+ + + +M
Sbjct: 655 LDETMSLIRDM 665
>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
Length = 605
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/466 (40%), Positives = 283/466 (60%), Gaps = 1/466 (0%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
+V G+ A LF PE D + T M++ Y++ G V+ A E F + V++ V
Sbjct: 140 MVAARASSGDMGAAENLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVS 199
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDN-VRPNEVTIVCVLSACSQLGALELGRWIHSYM 142
W A++ G V+N AL +F+ M D V+PN T+ VL CS L AL GR +H +
Sbjct: 200 WNAVVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWC 259
Query: 143 GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAV 202
K + + VG +L++MY +CGD+D A ++F+EM +D+ +N++I+G A HG +A+
Sbjct: 260 MKLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAI 319
Query: 203 EMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDL 262
++F +M ++G+ P +T + VL AC H GL D G + F++M Y IEPQ++HY C+VDL
Sbjct: 320 KLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYNIEPQVDHYSCMVDL 379
Query: 263 LSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTY 322
L R G E A + I +M P G+LL+AC+++ L+ E A++L++ ++G Y
Sbjct: 380 LCRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAY 439
Query: 323 VLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIY 382
V L+N YA + +W + ++R MK+ V K PG S +E+ HEF D HPQ + I+
Sbjct: 440 VQLANIYAVANRWDDVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLDLIH 499
Query: 383 KKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVV 442
K+ L +++K GYSP + LHD+E+ K L HSE+LAI +GLIST P T+R+
Sbjct: 500 DKLDRLGKLMKAMGYSPDLDFALHDVEESLKSQMLMRHSEKLAIAFGLISTSPGMTLRIF 559
Query: 443 KNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
KNLR+C DCH+ KLI+ I R+II+RD RFHHF G CSCGDYW
Sbjct: 560 KNLRICGDCHNAAKLISKIEDREIILRDTTRFHHFRGGHCSCGDYW 605
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 144/321 (44%), Gaps = 47/321 (14%)
Query: 32 GEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGL 91
G DA +LFD +P D V+ +++C+ G ++ A+ VFS + V+D W M+ GL
Sbjct: 55 GRLADARRLFDSIPH-PDAVSYNTLLSCHFACGDIDGAWRVFSTMPVRDVTSWNTMVSGL 113
Query: 92 VRNGEMARALDLFREMQ-RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLN 150
+NG + A +FR M R+ V N +V ++ +GA E + +
Sbjct: 114 SKNGAIEEAEAMFRAMPARNAVSWN--AMVAARASSGDMGAAE------NLFRNAPEKTD 165
Query: 151 HIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
I+ A+++ Y G++ KA++ F M R++ ++N+++AG + R+ +A+ +F+ M+
Sbjct: 166 AILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVE 225
Query: 211 QGI-RPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRP 269
I +P T VL CS+ + G ++ H C+ L R
Sbjct: 226 DAIVQPNPSTLSSVLLGCSNLSALGFGRQV---------------HQWCMKLPLGR---- 266
Query: 270 EEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAY 329
+ + G L ACK+ ++ + +A + + + Y
Sbjct: 267 ----SITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVA-------------WNAMISGY 309
Query: 330 ASSGKWKEAVQIRAKMKEAGV 350
A G ++A+++ KMK+ GV
Sbjct: 310 AQHGGGRKAIKLFEKMKDEGV 330
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 99/213 (46%), Gaps = 36/213 (16%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H +KL L + + L+ +Y KCG+ DA +LFDEM D+VA MI+ Y
Sbjct: 252 GRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEM-HTKDIVAWNAMISGYA 310
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+HG G +A+ LF +M+ + V P+ +T++
Sbjct: 311 QHG-----------------------------GGR--KAIKLFEKMKDEGVVPDWITLLA 339
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VL+AC G + G + + + I+ ++++ R G +++A+ + M E
Sbjct: 340 VLTACIHTGLCDFGIQCFETMQEAYNIEPQVDHYSCMVDLLCRAGLLERAVNMIHSMPFE 399
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEM-FREMINQ 211
+ Y +L+ ++ +++E E R++I Q
Sbjct: 400 PHPSAYGTLLTACRVY-KNLEFAEFAARKLIEQ 431
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/436 (44%), Positives = 280/436 (64%), Gaps = 1/436 (0%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
T ++ Y + G E+A +F ++ KD V W+AM+ + G+ A LF +M ++
Sbjct: 439 TALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIK 498
Query: 114 PNEVTIVCVLSACSQLGA-LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
PNE TI V+ AC+ A ++ GR H+ K+R V AL++MYSR G+ID A
Sbjct: 499 PNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQI 558
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
VFE +RD+ ++NS+I+G A HG S++A+E FR+M GI+ VTF+ V+ C+H GL
Sbjct: 559 VFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGL 618
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
V G + F SM RD+ I P +EHY C+VDL SR G+ +E I +M ++ +LL
Sbjct: 619 VVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLL 678
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
AC++H ++LG+ A +LL DS TYVLLSN YA++GKWKE ++R M V+K
Sbjct: 679 GACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKK 738
Query: 353 EPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE 412
E GCS I++ N++H FI D HP +QIYKK++ + +K +GYSP+T VLHDI + +
Sbjct: 739 EAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQ 798
Query: 413 KEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRN 472
KE L HSERLA+ +GLI+T P T +++VKNLRVC DCH ++K+++ I R+II+RD +
Sbjct: 799 KEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCS 858
Query: 473 RFHHFENGTCSCGDYW 488
RFHHF G CSCGD+W
Sbjct: 859 RFHHFNGGACSCGDFW 874
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 148/304 (48%), Gaps = 9/304 (2%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
+V A T +++ Y++ G V EVF + K+ V WT+++ G + + LF M+
Sbjct: 134 EVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMR 193
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ + PN T VLSA + GAL+LG+ +H+ K + V +L+NMY++CG ++
Sbjct: 194 AEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVE 253
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A VF M+ RD+ ++N+L+AGL ++ +EA+++F E + T+ T+ V+ C+
Sbjct: 254 DAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCA 313
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
+ + L ++ S +G + D S+ G +A + + + + +
Sbjct: 314 NLKQLALARQL-HSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSW 372
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+++S C +G + L + R+ + R ++ N + S K ++ I A
Sbjct: 373 TAIISGCIQNGDIPLAVVLFSRMREDR--------VMPNEFTYSAMLKASLSILPPQIHA 424
Query: 349 GVQK 352
V K
Sbjct: 425 QVIK 428
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 135/299 (45%), Gaps = 38/299 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
R++H VLK G + L + Y KCGE DA+
Sbjct: 321 ARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADAL----------------------- 357
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
N F + + ++ V WTA+I G ++NG++ A+ LF M+ D V PNE T
Sbjct: 358 ------NIFSMTT--GSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSA 409
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L A + L IH+ + K VG AL+ YS+ G + AL +F+ ++++D
Sbjct: 410 MLKASLSI----LPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKD 465
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-HGGLVDLGFEIF 240
V ++++++ A G A +F +M QGI+P + T V++AC+ VD G + F
Sbjct: 466 VVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQ-F 524
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+++ Y I +V + SR G + A + + D + S++S HG
Sbjct: 525 HAISIKYRYHDAICVSSALVSMYSRKGNIDSA-QIVFERQTDRDLVSWNSMISGYAQHG 582
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 101/226 (44%), Gaps = 33/226 (14%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H Q +K G RS+ L+ +Y KCG
Sbjct: 220 GQRVHAQSVKFGCRSSVFVCNSLMNMYAKCG----------------------------- 250
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
LVE+A VF+ ++ +D V W ++ GL N AL LF E + + + T
Sbjct: 251 ---LVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYAT 307
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE-EMKER 180
V+ C+ L L L R +HS + KH L V AL + YS+CG++ AL +F R
Sbjct: 308 VIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSR 367
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+V ++ ++I+G +G AV +F M + P + T+ +L A
Sbjct: 368 NVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA 413
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 7/217 (3%)
Query: 92 VRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH 151
R G + LD F +R V + T+ CVL AC + LG +H K D
Sbjct: 75 ARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGE 134
Query: 152 IVGG-ALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
+ G +L++MY +CG + + ++VFE M +++V T+ SL+ G A E + +F M
Sbjct: 135 VSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRA 194
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
+GI P TF VL+A + G +DLG + + + +G + ++++ ++ G E
Sbjct: 195 EGIWPNPFTFASVLSAVASQGALDLGQRV-HAQSVKFGCRSSVFVCNSLMNMYAKCGLVE 253
Query: 271 EAYDFITNMK----IAPDHIMLGSLLSACKIHGKLQL 303
+A M+ ++ + +M G L+ C++ LQL
Sbjct: 254 DAKSVFNWMETRDMVSWNTLMAGLQLNECELEA-LQL 289
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 72/131 (54%), Gaps = 1/131 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+ + S+ +++ Y G +++A VF R +D V W +MI G ++G +A++ FR+M
Sbjct: 535 DAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQM 594
Query: 108 QRDNVRPNEVTIVCVLSACSQLG-ALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
+ ++ + VT + V+ C+ G +E ++ S + H+I+ ++++YSR G
Sbjct: 595 EASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGK 654
Query: 167 IDKALQVFEEM 177
+D+ + + +M
Sbjct: 655 LDETMSLIRDM 665
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/504 (40%), Positives = 299/504 (59%), Gaps = 16/504 (3%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVE--------LYGK---CGEFKDAMQLFDEMPECND 49
E ++ Q+ G R N T + L+ L+GK C K + L P +D
Sbjct: 483 EALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADD 542
Query: 50 VVASTVMINCYVEHGLVENAFEVFSRV--KVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+ +I+ Y + E A ++F V K +D V WT MI G ++G+ AL LF M
Sbjct: 543 LKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGM 602
Query: 108 QR--DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRI-DLNHIVGGALINMYSRC 164
+ +++PN+ T+ C L AC++L AL GR +H+Y+ ++ + V LI+MYS+
Sbjct: 603 FKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKS 662
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL 224
GD+D A VF+ M +R+ ++ SL+ G MHGR +A+ +F EM + P +TF+ VL
Sbjct: 663 GDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVL 722
Query: 225 NACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPD 284
ACSH G+VD G F M++D+G++P EHY C+VDL R GR EA I M + P
Sbjct: 723 YACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPT 782
Query: 285 HIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAK 344
++ +LLSAC++H ++LGE A RLL+ S + G+Y LLSN YA++ +WK+ +IR
Sbjct: 783 PVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYTLLSNIYANARRWKDVARIRYT 842
Query: 345 MKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVV 404
MK G++K PGCS I+ + F +GD HPQ +QIY+ + +L Q +K GY P T
Sbjct: 843 MKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQIYETLADLIQRIKAIGYVPQTSFA 902
Query: 405 LHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKR 464
LHD++D EK L HSE+LA+ YG+++ P IR+ KNLR+C DCHS I I+ I +
Sbjct: 903 LHDVDDEEKGDLLFEHSEKLALAYGILTLHPRAPIRITKNLRICGDCHSAITYISKIIEH 962
Query: 465 KIIVRDRNRFHHFENGTCSCGDYW 488
+II+RD +RFHHF+NG+CSC YW
Sbjct: 963 EIILRDSSRFHHFKNGSCSCKGYW 986
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 165/365 (45%), Gaps = 51/365 (13%)
Query: 6 HGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGL 65
H V + G SN +V +YGKCG + A +FD++ C+
Sbjct: 282 HATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDL--CHR---------------- 323
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ-RDNVRPNEVTIVCVLS 124
++D V W +++ + + AL LF +M R + P+ +++V +L
Sbjct: 324 -----------GIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILP 372
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
AC+ L A GR +H + + + + VG A+++MY++CG +++A +VF+ MK +DV +
Sbjct: 373 ACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVS 432
Query: 185 YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT 244
+N+++ G + GR A+ +F M + I VT+ V+ + G ++F+ M
Sbjct: 433 WNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMC 492
Query: 245 RDYGIEPQIEHYGCIVDLLSRV--------GRPEEAY--DFITNMKIAPDHIM--LGSLL 292
D G P + +V LLS G+ Y FI N+ PD L +
Sbjct: 493 -DCGSRPNVV---TLVSLLSACVSVGALLHGKETHCYAIKFILNLD-GPDPGADDLKVIN 547
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSA---DSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
++ K Q E +A+++ D S D T+ ++ YA G A+Q+ + M +
Sbjct: 548 GLIDMYAKCQSTE-VARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMD 606
Query: 350 VQKEP 354
+P
Sbjct: 607 KSIKP 611
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 136/304 (44%), Gaps = 9/304 (2%)
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDT--VCWTAMIDGLVRNGEMARALDLFREMQRD 110
+T +I Y+ A + R+ + W +I + G L+R+M+
Sbjct: 194 ATNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSL 253
Query: 111 NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
P+ T V AC+ L +L LG +H+ + + N V A+++MY +CG + A
Sbjct: 254 GWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHA 313
Query: 171 LQVFEEMKER---DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGI-RPTKVTFVGVLNA 226
+F+++ R D+ ++NS+++ + A+ +F +M + + P ++ V +L A
Sbjct: 314 HNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPA 373
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
C+ G ++ R G+ + +VD+ ++ G+ EEA MK D +
Sbjct: 374 CASLAASLRGRQVHGFSIRS-GLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFK-DVV 431
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
++++ G+L+ + +R+ + D T+ + YA G+ EA+ + +M
Sbjct: 432 SWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQM 491
Query: 346 KEAG 349
+ G
Sbjct: 492 CDCG 495
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/488 (40%), Positives = 290/488 (59%), Gaps = 33/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR IH +V++ G + LV++Y KCG DA +FD++ +
Sbjct: 177 EGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVD-------------- 222
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+D V W +M+ +NG +L L EM VRP E T+V
Sbjct: 223 ------------------RDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLV 264
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+S+ + + L GR IH + +H N V ALI+MY++CG + A +FE ++E+
Sbjct: 265 TVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREK 324
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
V ++N++I G AMHG ++EA+++F M+ + +P +TFVG L ACS G L+D G ++
Sbjct: 325 RVVSWNAIITGYAMHGLAVEALDLFERMMKEA-QPDHITFVGALAACSRGRLLDEGRALY 383
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
M RD I P +EHY C+VDLL G+ +EAYD I M + PD + G+LL++CK HG
Sbjct: 384 NLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGN 443
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++L E ++L++ DSG YV+L+N YA SGKW+ ++R M + G++K CS IE
Sbjct: 444 VELAEVALEKLIELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDKGIKKNIACSWIE 503
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
V N+++ F+ GD+ HP IY +++ L+ +++ GY P T V HD+E+ EK + H
Sbjct: 504 VKNKVYAFLSGDVSHPNSGAIYAELKRLEGLMREAGYVPDTGSVFHDVEEDEKTDMVCSH 563
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLAI +GLIST P T + + KNLR+C DCH IK I+ IT+R+I VRD NR+HHF +G
Sbjct: 564 SERLAIAFGLISTLPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFRHG 623
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 624 LCSCGDYW 631
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 146/348 (41%), Gaps = 67/348 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H ++ +LG+ N KLV Y C +
Sbjct: 77 GKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLR-------------------------- 110
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
NA +F ++ + W +I NG A+ L+ +M ++P+ T+
Sbjct: 111 ------NAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPF 164
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL ACS L + GR IH + + + + VG AL++MY++CG + A VF+++ +RD
Sbjct: 165 VLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRD 224
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+NS++A A +G E++ + EM +G+RPT+ T V V+++ + + G EI
Sbjct: 225 AVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHG 284
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPE------------------------------- 270
R +G + + ++D+ ++ G +
Sbjct: 285 FGWR-HGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAV 343
Query: 271 EAYDFITNM--KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL-DCR 315
EA D M + PDHI L+AC L G + ++ DCR
Sbjct: 344 EALDLFERMMKEAQPDHITFVGALAACSRGRLLDEGRALYNLMVRDCR 391
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 113/259 (43%), Gaps = 14/259 (5%)
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
N +L +C ALE G+ +H+ + + I N + L+N YS C + A +F
Sbjct: 57 NHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLF 116
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
+++ + ++ +N LI A +G A+ ++ +M+ G++P T VL ACS +
Sbjct: 117 DKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIG 176
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
G I + + R G E + +VD+ ++ G +A + + D ++ S+L+A
Sbjct: 177 EGRVIHERVIRS-GWERDVFVGAALVDMYAKCGCVVDARHVFDKI-VDRDAVLWNSMLAA 234
Query: 295 CKIHG----KLQLGEQIAKR--------LLDCRSADSGTYVLLSNAYASSGKWKEAVQIR 342
+G L L ++A + L+ S+ + L W+ Q
Sbjct: 235 YAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYN 294
Query: 343 AKMKEAGVQKEPGCSSIEV 361
K+K A + C S++V
Sbjct: 295 DKVKTALIDMYAKCGSVKV 313
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/443 (42%), Positives = 279/443 (62%), Gaps = 5/443 (1%)
Query: 48 NDVVASTVMINCYVE-HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
+D+V V++N Y + +E A +VF R++ +D + W +I V+ G+ ALD+F++
Sbjct: 297 SDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQ 356
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
MQ +NV PNE+T+ VLSAC+ LGA G+ +H+ + R + ++ +L+NMY+RCG
Sbjct: 357 MQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGS 416
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+D + VF ++++ + ++++LIA A HG S +E F E++ +G+ VT V L+A
Sbjct: 417 LDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSA 476
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
CSHGG++ G + F SM D+G+ P H+ C+VDLLSR GR E A + I +M PD +
Sbjct: 477 CSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAV 536
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADS-GTYVLLSNAYASSGKWKEAVQIRAKM 345
SLLS CK+H + ++A +L + S D T LLSN YA +G+W + +R
Sbjct: 537 AWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDD---VRKTR 593
Query: 346 KEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVL 405
+K PGCS IE+N+ +HEF+ GD HP+ E I +++ L + +K GY P +VL
Sbjct: 594 NRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVL 653
Query: 406 HDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRK 465
H++++ EKE L HSE+LAI YGLIST P T + +VKNLR C DCH+ K I+ I RK
Sbjct: 654 HNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRK 713
Query: 466 IIVRDRNRFHHFENGTCSCGDYW 488
I+VRD RFHHFENG+CSC DYW
Sbjct: 714 IVVRDSTRFHHFENGSCSCKDYW 736
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 161/295 (54%), Gaps = 4/295 (1%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D + +IN Y + G +E+A +VF R+K +D + W MI G + G +AL+LF+ M
Sbjct: 196 SDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRM 255
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC-GD 166
++ +PN VT + +L+AC+ L LE GR IH + +H + + ++G L+NMY++C
Sbjct: 256 GPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSS 315
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+++A QVFE ++ RDV T+N LI +G++ +A+++F++M + + P ++T VL+A
Sbjct: 316 LEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSA 375
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
C+ G G + ++ + + ++++ +R G ++ ++ +
Sbjct: 376 CAVLGAKRQG-KAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIR-DKSLV 433
Query: 287 MLGSLLSACKIHGKLQLG-EQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQ 340
+L++A HG + G E + L + +AD T V +A + G KE VQ
Sbjct: 434 SWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQ 488
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 182/392 (46%), Gaps = 49/392 (12%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKD--------AMQLFDEMPECNDVVAST 54
RE G ++ L R V G C KD AM L ++ E D++ T
Sbjct: 40 REALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETQLLEF-DIILGT 98
Query: 55 VMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM---QRDN 111
+I Y +E A + F + K V W A+I G RNG+ AL ++++M +
Sbjct: 99 ALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEG 158
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
++P+ +T L ACS +G + GR I + + IV ALINMYS+CG ++ A
Sbjct: 159 MKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESAR 218
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
+VF+ +K RDV +N++I+G A G + +A+E+F+ M +P VTF+G+L AC++
Sbjct: 219 KVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLE 278
Query: 232 LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSR-------------------------- 265
++ G I + + +++G E + ++++ ++
Sbjct: 279 DLEQGRAIHRKV-KEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNIL 337
Query: 266 ------VGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR- 315
G+ ++A D M+ +AP+ I L ++LSAC + G + G+ + + R
Sbjct: 338 IVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRC 397
Query: 316 SADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
AD L N Y G + V + A +++
Sbjct: 398 KADVVLENSLMNMYNRCGSLDDTVGVFAAIRD 429
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 155/300 (51%), Gaps = 9/300 (3%)
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
Y + G V +A VF ++ ++V WT ++ RNG AL +R M + +RP+
Sbjct: 2 YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61
Query: 120 VCVLSACSQLGALELGRWIHSY-MGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
V + CS L+ G+ +H+ + ++ + I+G ALI MY+RC D++ A + F+EM
Sbjct: 62 VVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMG 121
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN---QGIRPTKVTFVGVLNACSHGGLVDL 235
++ + T+N+LIAG + +G A++++++M++ +G++P +TF L ACS G +
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQ 181
Query: 236 GFEI-FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
G EI +++ Y + +++ ++++ S+ G E A +K D I +++S
Sbjct: 182 GREIEARTVASGYASDSIVQN--ALINMYSKCGSLESARKVFDRLK-NRDVIAWNTMISG 238
Query: 295 CKIHGKLQLGEQIAKRL-LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
G ++ +R+ + + T++ L A + ++ I K+KE G + +
Sbjct: 239 YAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESD 298
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 93/229 (40%), Gaps = 38/229 (16%)
Query: 160 MYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVT 219
MY +CG + AL VF ++ + ++ ++A A +G EA+ +R M+ +G+RP
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 220 FVGVLNACS-----------HGGLVD---LGFEI-----------------FQSMTRDYG 248
FV + CS H +++ L F+I T D
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 249 IEPQIEHYGCIVDLLSRVGRPEEAYDFITNM------KIAPDHIMLGSLLSACKIHGKLQ 302
+ + + ++ SR G A +M + PD I S L AC + G +
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180
Query: 303 LGEQI-AKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
G +I A+ + ++DS L N Y+ G + A ++ ++K V
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDV 229
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/556 (37%), Positives = 304/556 (54%), Gaps = 70/556 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEF--------------------------- 34
G+EIHG ++ G S + LV++Y KCG
Sbjct: 255 GKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQ 314
Query: 35 ----KDAMQLFDEMPE----------------CND----------------------VVA 52
K+AM +F +M + C D V
Sbjct: 315 NENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSV 374
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
+I+ Y + V+ A +F +++ + V W AMI G +NG AL+ F +MQ V
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTV 434
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
+P+ T V V++A ++L +WIH + ++ +D N V AL++MY++CG I A
Sbjct: 435 KPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARL 494
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
+F+ M ER VTT+N++I G HG A+E+F EM IRP VTF+ V++ACSH GL
Sbjct: 495 IFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGL 554
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
V+ G + F M +Y IEP ++HYG +VDLL R GR EA+DFI M + P + G++L
Sbjct: 555 VEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAML 614
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
AC+IH + E++A+RL + D G +VLL+N Y ++ W++ Q+R M G++K
Sbjct: 615 GACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRK 674
Query: 353 EPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE 412
PGCS +E+ NE+H F G HP ++IY +++L +K GY P T ++L +ED
Sbjct: 675 TPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIKEAGYVPDTNLIL-GLEDDV 733
Query: 413 KEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRN 472
KE L+ HSE+LAI +GL++T TTI V KNLRVC DCH+ K I+ +T R+IIVRD
Sbjct: 734 KEQLLSSHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIIVRDMQ 793
Query: 473 RFHHFENGTCSCGDYW 488
RFHHF+NG CSCGDYW
Sbjct: 794 RFHHFKNGACSCGDYW 809
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 122/235 (51%), Gaps = 32/235 (13%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIHG ++K G + L +Y KC + +A ++FD MPE
Sbjct: 154 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPE--------------- 198
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+D V W ++ G +NG AL++ M +N++P+ +TIV
Sbjct: 199 -----------------RDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVS 241
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL A S L + +G+ IH Y + D + AL++MY++CG + A +F+ M ER+
Sbjct: 242 VLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERN 301
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
V ++NS+I + EA+ +F++M+++G++PT V+ +G L+AC+ G ++ G
Sbjct: 302 VVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERG 356
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 111/219 (50%), Gaps = 1/219 (0%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
T +++ + +G V+ A VF + K V + M+ G + ++ +AL F M+ D V
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVE 132
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
P +L C L +G+ IH + K L+ L NMY++C + +A +V
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKV 192
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV 233
F+ M ERD+ ++N+++AG + +G + A+EM M + ++P+ +T V VL A S L+
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLI 252
Query: 234 DLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
+G EI R G + + +VD+ ++ G + A
Sbjct: 253 RIGKEIHGYAMRA-GFDSLVNIATALVDMYAKCGSLKTA 290
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 108 QRDNVRPN--EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG 165
QR+ + N E +L CS L L R I + K+ + H+ L++++ R G
Sbjct: 27 QRNYIPANVYEHPAALLLERCSSLKEL---RHILPLIFKNGLYQEHLFQTKLVSLFCRYG 83
Query: 166 DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
+D+A +VFE + ++ Y +++ G A +A++ F M + + P F +L
Sbjct: 84 SVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLK 143
Query: 226 ACS-----------HGGLVDLGFEI 239
C HG LV GF +
Sbjct: 144 VCGDEAELRVGKEIHGLLVKSGFSL 168
>gi|357139833|ref|XP_003571481.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Brachypodium distachyon]
Length = 617
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/466 (40%), Positives = 285/466 (61%), Gaps = 1/466 (0%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
+V + G+ A + F++ P+ + V T M++ Y++ G VE A + F + V+ V
Sbjct: 152 MVSCFAHAGDMCAAEECFEDAPDKENAVLWTAMVSGYMDSGHVEKAMQFFEAMPVRSLVS 211
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTIVCVLSACSQLGALELGRWIHSYM 142
W A++ G V+N AL +F+ M RD +VRPNE T+ VL CS L AL GR +H +
Sbjct: 212 WNAVVAGYVKNSRAEDALWVFKTMVRDADVRPNESTLSSVLLGCSNLSALGFGRQVHQWC 271
Query: 143 GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAV 202
K + G +L++MY +CGD+D A ++F EM+ RDV +N++I+G A HG EA+
Sbjct: 272 TKLPLSRRVTAGTSLVSMYCKCGDLDGACKLFSEMRIRDVIAWNAMISGYAHHGDGREAI 331
Query: 203 EMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDL 262
E+F +M +QG+ P +TFV VL AC H G+ D G + F+ M YGIE +++HY C+VDL
Sbjct: 332 ELFEKMKSQGVEPNWITFVAVLTACIHTGMCDFGMQCFERMQEVYGIEARVDHYSCMVDL 391
Query: 263 LSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTY 322
L R G E A I +M P G+LL+A +++ ++ E A +L++ ++G Y
Sbjct: 392 LCRAGSLERAVSLIRSMPFQPHPSAYGTLLNASRVYKNMEFAEFAAGKLIEQNPQNAGAY 451
Query: 323 VLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIY 382
V L+N YA + +W + ++R MK+ V K PG S +E+N IH F D HPQ I+
Sbjct: 452 VQLANIYAVANQWADVSRVRRWMKDNAVVKTPGYSWVEINGVIHVFRSNDRLHPQLSLIH 511
Query: 383 KKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVV 442
+++ +L++ +K GY P + LHD+++ K L HSE+LAI +GL+ST P T+R+
Sbjct: 512 ERLCQLEERMKAMGYVPDLDFALHDVDESLKVQMLMRHSEKLAIAFGLLSTAPGITLRIF 571
Query: 443 KNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
KNLRVC DCH+ KLI+ I R+II+RD RFHHF +G CSCGDYW
Sbjct: 572 KNLRVCGDCHTAAKLISKIEDREIILRDTTRFHHFRSGHCSCGDYW 617
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 83/194 (42%), Gaps = 42/194 (21%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H KL L + LV +Y KCG+ A +LF EM DV+A MI+ Y
Sbjct: 264 GRQVHQWCTKLPLSRRVTAGTSLVSMYCKCGDLDGACKLFSEM-RIRDVIAWNAMISGYA 322
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG DG A++LF +M+ V PN +T V
Sbjct: 323 HHG------------------------DG-------REAIELFEKMKSQGVEPNWITFVA 351
Query: 122 VLSACSQLGALELG-----RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
VL+AC G + G R Y + R+D H ++++ R G +++A+ +
Sbjct: 352 VLTACIHTGMCDFGMQCFERMQEVYGIEARVD--HY--SCMVDLLCRAGSLERAVSLIRS 407
Query: 177 MK-ERDVTTYNSLI 189
M + + Y +L+
Sbjct: 408 MPFQPHPSAYGTLL 421
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/558 (38%), Positives = 306/558 (54%), Gaps = 74/558 (13%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFK-------------------------- 35
G++IHGQ K G SN + LV +Y K G+
Sbjct: 119 GKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQ 178
Query: 36 -----DAMQLFDEMPECN----------------------------------------DV 50
+A+ +F EM +CN D+
Sbjct: 179 NGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDI 238
Query: 51 VASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD 110
V S + Y + GLVE A F+R++ + + W AMI G NG A+ LFREM
Sbjct: 239 VIS--LTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITK 296
Query: 111 NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
N+R + +T+ + A +Q+G+LEL RW+ Y+ K + V LI+MY++CG I A
Sbjct: 297 NIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLA 356
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
VF+ + ++DV ++ +I G +HG EA+ ++ EM G+ P TF+G+L AC +
Sbjct: 357 RCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNS 416
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGS 290
GLV G+E+F M D+GIEP +HY C+VDLL R G +AYDFI +M I P + G+
Sbjct: 417 GLVKEGWELFHLMP-DHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGA 475
Query: 291 LLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
LLSACKIH K++LGE A++L ++G YV LSN YAS+ W +R M + G+
Sbjct: 476 LLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGL 535
Query: 351 QKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIED 410
K+ G SSIE+N + F +GD HP+ ++I++++ L++ +K GY P E VLHD+
Sbjct: 536 NKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNH 595
Query: 411 WEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRD 470
E E L HSERLA+ YG+IST P TT+R+ KNLR C +CHS IKLI+ + R+II+RD
Sbjct: 596 EEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIRD 655
Query: 471 RNRFHHFENGTCSCGDYW 488
RFHHF++G CSCGD+W
Sbjct: 656 AKRFHHFKDGVCSCGDFW 673
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 120/245 (48%), Gaps = 4/245 (1%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
IN + G V A + F V D + W A+I G + + + ++ +MQ V PN
Sbjct: 40 FINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPN 99
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
T + VL AC +G+ IH K+ N V +L++MY++ G I A VF+
Sbjct: 100 CFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFD 159
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
++ +R V ++ S+I+G +G +EA+ +F+EM ++P + V V+ A ++ + DL
Sbjct: 160 KLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTN--VEDL 217
Query: 236 G-FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
G + + G+E + + + + ++ G E A F M+ P+ I+ +++S
Sbjct: 218 GQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRME-KPNLILWNAMISG 276
Query: 295 CKIHG 299
+G
Sbjct: 277 YANNG 281
>gi|115476560|ref|NP_001061876.1| Os08g0434000 [Oryza sativa Japonica Group]
gi|42407498|dbj|BAD10615.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|42409483|dbj|BAD09839.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623845|dbj|BAF23790.1| Os08g0434000 [Oryza sativa Japonica Group]
Length = 601
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/466 (40%), Positives = 287/466 (61%), Gaps = 6/466 (1%)
Query: 29 GKCGEFKDAMQLFDEM---PECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWT 85
G C A QL + D + +T +++ Y G ++A +VF + V+DT+ W
Sbjct: 136 GHCRALAHARQLHANVVAEGHSPDALLATSLVSSYAACGDGDSARKVFDEMPVRDTIAWN 195
Query: 86 AMIDGLVRNGEMARALDLFREMQ--RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
+I RN AL LF M+ + P++VT + +L AC+ LGAL+ G + Y
Sbjct: 196 VLITCYTRNRRTKDALKLFDAMRGGENGAEPDDVTCILLLQACTSLGALDFGEKVWEYAV 255
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
H V +LI MY++CG +DKA QVF E ++ V T++++I+GLA +G +A+
Sbjct: 256 DHGYGGELKVRNSLITMYTKCGCVDKAYQVFCETPKKSVVTWSAMISGLASNGFGKDAIS 315
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
F EM G+ P + TF GVL+ACSH GLVD GF+ F M +Y ++P + HYGC+VDL+
Sbjct: 316 AFEEMGRSGVAPDEQTFTGVLSACSHSGLVDEGFKFFDIMCYEYQLKPNVHHYGCMVDLM 375
Query: 264 SRVGRPEEAYDFIT-NMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTY 322
R G ++AY+ + +M++APD + +LL AC+IHG + LGE++ L++ ++ +G Y
Sbjct: 376 GRAGLLDQAYELVVKDMRVAPDATIWRTLLGACRIHGHIDLGERVINHLIELKAQQAGDY 435
Query: 323 VLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIY 382
VLL N YA+ W + ++R MKE G+Q PGC+++E+N EIHEFI D HP++ +IY
Sbjct: 436 VLLLNTYAAVEDWGKVAEVRKLMKEKGIQTTPGCTTVELNGEIHEFIAADASHPRKAEIY 495
Query: 383 KKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVV 442
+K+ E+ + +++ GY P+ LHD++ KE ALA HSE+LAI + L+ T + IR+
Sbjct: 496 EKLDEINKHLRIAGYVPNVSSELHDLDSEGKECALAYHSEKLAIAFALLVTPQHRPIRLA 555
Query: 443 KNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
KNLRVC DCH+ K+ + + R +IVRDR RFHHF+ CSC DYW
Sbjct: 556 KNLRVCVDCHNFTKVFSGVYHRLVIVRDRTRFHHFKEFQCSCNDYW 601
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 88/198 (44%), Gaps = 43/198 (21%)
Query: 21 RLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKD 80
R L+ +Y KCG A Q+F E P+ K
Sbjct: 266 RNSLITMYTKCGCVDKAYQVFCETPK--------------------------------KS 293
Query: 81 TVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRW--- 137
V W+AMI GL NG A+ F EM R V P+E T VLSACS G ++ G
Sbjct: 294 VVTWSAMISGLASNGFGKDAISAFEEMGRSGVAPDEQTFTGVLSACSHSGLVDEGFKFFD 353
Query: 138 IHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ-VFEEMK-ERDVTTYNSLIAGLAMH 195
I Y + + +++H G ++++ R G +D+A + V ++M+ D T + +L+ +H
Sbjct: 354 IMCYEYQLKPNVHHY--GCMVDLMGRAGLLDQAYELVVKDMRVAPDATIWRTLLGACRIH 411
Query: 196 GRSIEAVEMFREMINQGI 213
G +++ +IN I
Sbjct: 412 GH----IDLGERVINHLI 425
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/450 (42%), Positives = 282/450 (62%), Gaps = 1/450 (0%)
Query: 39 QLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMA 98
+L D++ +DV +I+ Y + V+ A ++F ++ K V W AMI G +NG +
Sbjct: 256 KLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVN 315
Query: 99 RALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALI 158
AL+ F EMQ N++P+ T+V V+ A ++L +WIH + + +D N V AL+
Sbjct: 316 EALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALV 375
Query: 159 NMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKV 218
+MY++CG I A ++F+ M R V T+N++I G HG +VE+F+EM I+P +
Sbjct: 376 DMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDI 435
Query: 219 TFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITN 278
TF+ L+ACSH GLV+ G F+SM +DYGIEP ++HYG +VDLL R GR +A+DFI
Sbjct: 436 TFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQK 495
Query: 279 MKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEA 338
M I P + G++L ACKIH + LGE+ A + D G +VLL+N YA++ W +
Sbjct: 496 MPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKV 555
Query: 339 VQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYS 398
++R M+++G+QK PGCS +E+ NE+H F G HPQ ++IY ++ L ++ GY
Sbjct: 556 AKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYSYLETLVDEIRAAGYV 615
Query: 399 PSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLI 458
P T + HD+ED K L HSE+LAI +GL++T T I + KNLRVC DCH+ K I
Sbjct: 616 PDTNSI-HDVEDDVKVQLLNTHSEKLAIAFGLLNTSTGTPIHIRKNLRVCGDCHNATKYI 674
Query: 459 ANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
+ +T R+IIVRD +RFH F++G CSCGDYW
Sbjct: 675 SLVTGREIIVRDMHRFHLFKDGVCSCGDYW 704
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 142/298 (47%), Gaps = 37/298 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIHG V+ G N +V +Y KC + DA
Sbjct: 49 GKEIHGSVITSGFSWNLFAMTGVVNMYAKCRQINDA------------------------ 84
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ +F R+ +D VCW MI G +NG AL L M + RP+ +TIV
Sbjct: 85 --------YNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVS 136
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L A + L +G +H Y+ + + V AL++MYS+CG + A +F+ M R
Sbjct: 137 ILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRT 196
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++NS+I G G + A+ +F++M+++G++PT VT +G L+AC+ G ++ G +
Sbjct: 197 VVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERG-KFVH 255
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK----IAPDHIMLGSLLSAC 295
+ ++ + ++ + S+ R + A D N++ ++ + ++LG + C
Sbjct: 256 KLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGC 313
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 117/227 (51%), Gaps = 32/227 (14%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +HG VL+ G S + LV++Y KCG
Sbjct: 150 GMAVHGYVLRAGFESLVNVSTALVDMYSKCGS---------------------------- 181
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
V A +F + + V W +MIDG V++G+ A+ +F++M + V+P VT++
Sbjct: 182 ----VSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMG 237
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
L AC+ LG LE G+++H + + ++D + V +LI+MYS+C +D A +F+ ++ +
Sbjct: 238 ALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKT 297
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+ ++N++I G A +G EA+ F EM ++ I+P T V V+ A +
Sbjct: 298 LVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALA 344
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 7/234 (2%)
Query: 87 MIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHR 146
M+ G ++ + AL F M+ D+VRP +L C L+ G+ IH +
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 147 IDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
N ++NMY++C I+ A +F+ M ERD+ +N++I+G A +G + A+ +
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 207 EMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRV 266
M +G RP +T V +L A + L+ +G + + R G E + +VD+ S+
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLR-AGFESLVNVSTALVDMYSKC 179
Query: 267 GRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG 320
G A M DH + S S I G +Q G+ L+ + D G
Sbjct: 180 GSVSIARVIFDGM----DHRTVVSWNSM--IDGYVQSGDAEGAMLIFQKMLDEG 227
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 34/197 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+ + IHG V++ L N LV++Y KCG A +LFD M V+ MI+ Y
Sbjct: 351 QAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMM-NARHVITWNAMIDGY 409
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HGL + + E LF+EM++ ++PN++T +
Sbjct: 410 GTHGLGKTSVE-------------------------------LFKEMKKGTIKPNDITFL 438
Query: 121 CVLSACSQLGALELGRWIHSYMGK-HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
C LSACS G +E G M K + I+ GA++++ R G +++A ++M
Sbjct: 439 CALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPI 498
Query: 179 ERDVTTYNSLIAGLAMH 195
+ +T Y +++ +H
Sbjct: 499 KPGITVYGAMLGACKIH 515
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/436 (41%), Positives = 281/436 (64%), Gaps = 1/436 (0%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
T +++ +V+ G + +A +VF ++ KD + W+AM+ G + GE A +F ++ R+ ++
Sbjct: 441 TALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIK 500
Query: 114 PNEVTIVCVLSACSQ-LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
PNE T +++AC+ ++E G+ H+Y K R++ V +L+ +Y++ G+I+ A +
Sbjct: 501 PNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHE 560
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
+F+ KERD+ ++NS+I+G A HG++ +A+E+F EM + + +TF+GV++AC+H GL
Sbjct: 561 IFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGL 620
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
V G F M D+ I P +EHY C++DL SR G +A D I M P + +L
Sbjct: 621 VGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVL 680
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
+A ++H ++LG+ A++++ S YVLLSN YA++G W E V +R M + V+K
Sbjct: 681 AASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKK 740
Query: 353 EPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE 412
EPG S IEV N+ + F+ GD+ HP + IY K+ EL ++ GY P T V HDIED +
Sbjct: 741 EPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSKLSELNTRLRDVGYQPDTNYVFHDIEDEQ 800
Query: 413 KEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRN 472
KE L+ HSERLAI +GLI+T P +++VKNLRVC DCHS IKL++ + KR I+VRD N
Sbjct: 801 KETILSHHSERLAIAFGLIATLPEIPLQIVKNLRVCGDCHSFIKLVSLVEKRYIVVRDSN 860
Query: 473 RFHHFENGTCSCGDYW 488
RFHHF+ G CSCGDYW
Sbjct: 861 RFHHFKGGLCSCGDYW 876
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 170/340 (50%), Gaps = 53/340 (15%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
R +H + LK GL +N++ L+ KC E DA LF M
Sbjct: 324 RVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLM------------------ 365
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
HG V+ V WTAMI G ++NG+ +A++LF M+R+ V+PN T +
Sbjct: 366 HG-------------VQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTI 412
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L+ + E IH+ + K + + VG AL++ + + G+I A++VFE ++ +DV
Sbjct: 413 LTVQHAVFISE----IHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDV 468
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH-GGLVDLGFEIFQ 241
+++++AG A G + EA ++F ++ +GI+P + TF ++NAC+ V+ G +
Sbjct: 469 IAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQF-- 526
Query: 242 SMTRDYGIEPQIEHYGCI----VDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
Y I+ ++ + C+ V L ++ G E A++ K D + S++S
Sbjct: 527 ---HAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQK-ERDLVSWNSMISGYAQ 582
Query: 298 HGK----LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSG 333
HG+ L++ E++ KR L+ D+ T++ + +A A +G
Sbjct: 583 HGQAKKALEVFEEMQKRNLE---VDAITFIGVISACAHAG 619
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 131/279 (46%), Gaps = 35/279 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++H Q +K GL + S LV++Y K G +D ++FDEM +
Sbjct: 121 GEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGD--------------- 165
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+D V W +++ G N + +LF MQ + RP+ T+
Sbjct: 166 -----------------RDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVST 208
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V++A + GA+ +G IH+ + K + +V +LI+M S+ G + A VF+ M+ +D
Sbjct: 209 VIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKD 268
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF-EIF 240
++NS+IAG ++G+ +EA E F M G +PT TF V+ +C+ L +LG +
Sbjct: 269 SVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCA--SLKELGLVRVL 326
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM 279
T G+ ++ L++ ++A+ + M
Sbjct: 327 HCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLM 365
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 140/292 (47%), Gaps = 14/292 (4%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A ++F + ++D ++ R + AL LF + R + P+ T+ CVLS C+
Sbjct: 55 AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAG 114
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
+G +H K + + VG +L++MY++ G++ +VF+EM +RDV ++NSL
Sbjct: 115 SFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSL 174
Query: 189 IAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYG 248
+ G + + + + E+F M +G RP T V+ A ++ G V +G +I ++ G
Sbjct: 175 LTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQI-HALVVKLG 233
Query: 249 IEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIA 308
E + ++ +LS+ G +A NM+ D + S+++ I+G+
Sbjct: 234 FETERLVCNSLISMLSKSGMLRDARVVFDNME-NKDSVSWNSMIAGHVINGQ-------- 284
Query: 309 KRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
D + ++ + L+ A + + ++ A +KE G+ + C +++
Sbjct: 285 ----DLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLK 332
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 88/163 (53%), Gaps = 1/163 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
N + S+ ++ Y + G +E+A E+F R K +D V W +MI G ++G+ +AL++F EM
Sbjct: 537 NALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEM 596
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGR-WIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
Q+ N+ + +T + V+SAC+ G + G+ + + + H I+ +I++YSR G
Sbjct: 597 QKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGM 656
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
+ KA+ + M T ++ + R+IE ++ E I
Sbjct: 657 LGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKI 699
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/489 (38%), Positives = 295/489 (60%), Gaps = 2/489 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+++H + + + L+++Y K G +FD + N + + T MI+ Y
Sbjct: 124 QGKQVHARFFLSPFSDDDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSI-SWTTMISGY 182
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR-PNEVTI 119
G AF +F + ++ WTA+I GLV++G A LF EM+ + + + + +
Sbjct: 183 ARSGRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVL 242
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V+ AC+ L ELG+ +H + + + ALI+MY++C D+ A +F EM
Sbjct: 243 SSVVGACANLALWELGKQMHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCR 302
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+DV ++ S+I G A HG++ EA+ ++ EM+ G++P +VTFVG+++ACSH GLV G +
Sbjct: 303 KDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTL 362
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F++M D+GI P ++HY C++DL SR G +EA + I M + PD +LLS+CK HG
Sbjct: 363 FRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHG 422
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
Q+ +IA LL+ + D +Y+LLSN YA +G W++ ++R M +K PG S I
Sbjct: 423 NTQMAVRIADHLLNLKPEDPSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCI 482
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
++ H F G+ HP R++I M+EL + ++ GY+P T VLHD++ EKE L
Sbjct: 483 DLGKGSHVFYAGETSHPMRDEIIGLMRELDEEMRKRGYAPDTSSVLHDMDQQEKERQLFW 542
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSERLA+ YGL+ P T IR+VKNLRVC DCH+++KLI+ IT R+I VRD R+HHF++
Sbjct: 543 HSERLAVAYGLLKAVPGTVIRIVKNLRVCGDCHTVLKLISAITNREIYVRDAKRYHHFKD 602
Query: 480 GTCSCGDYW 488
G CSC D+W
Sbjct: 603 GNCSCNDFW 611
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/411 (21%), Positives = 158/411 (38%), Gaps = 111/411 (27%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
+++H Q++K GL + L+ YGKCG +DA+QLFD +P
Sbjct: 22 AKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPR--------------- 66
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+D V W +++ + RAL + R + P+
Sbjct: 67 -----------------RDPVAWASLLTACNLSNRPHRALSISRSLLSTGFHPDHFVFAS 109
Query: 122 VLSACSQLGALEL--GRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID----------- 168
++ AC+ LG L + G+ +H+ + +V +LI+MY++ G D
Sbjct: 110 LVKACANLGVLHVKQGKQVHARFFLSPFSDDDVVKSSLIDMYAKFGLPDYGRAVFDSISS 169
Query: 169 --------------------KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM 208
+A ++F + R++ + +LI+GL G ++A +F EM
Sbjct: 170 LNSISWTTMISGYARSGRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGVDAFHLFVEM 229
Query: 209 INQGIRPT-KVTFVGVLNACS-----------HGGLVDLGFE------------------ 238
++GI T + V+ AC+ HG ++ LG+E
Sbjct: 230 RHEGISVTDPLVLSSVVGACANLALWELGKQMHGVVITLGYESCLFISNALIDMYAKCSD 289
Query: 239 ------IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLG 289
IF M R + + I+ ++ G+ EEA YD + + P+ +
Sbjct: 290 LVAAKYIFCEMCRK-----DVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFV 344
Query: 290 SLLSACKIHGKLQLGEQIAKRLLDCR--SADSGTYVLLSNAYASSGKWKEA 338
L+ AC G + G + + +++ S Y L + ++ SG EA
Sbjct: 345 GLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEA 395
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 96/227 (42%), Gaps = 21/227 (9%)
Query: 134 LGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLA 193
L + +H+ + K ++ + + L+N Y +CG I ALQ+F+ + RD + SL+
Sbjct: 21 LAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACN 80
Query: 194 MHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV------DLGFEIFQSMTRDY 247
+ R A+ + R +++ G P F ++ AC++ G++ + F S D
Sbjct: 81 LSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDD 140
Query: 248 GIEPQIEHYGCIVDLLSRVGRPE---EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLG 304
+ ++D+ ++ G P+ +D I+++ M+ + + +L
Sbjct: 141 DVVKS-----SLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLF 195
Query: 305 EQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
Q R L +A L + SG +A + +M+ G+
Sbjct: 196 RQTPYRNLFAWTA-------LISGLVQSGNGVDAFHLFVEMRHEGIS 235
>gi|414883628|tpg|DAA59642.1| TPA: hypothetical protein ZEAMMB73_113196, partial [Zea mays]
Length = 635
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/471 (41%), Positives = 284/471 (60%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H +K G + R + YG CG+ ++FDE+P DVV ++ YV
Sbjct: 151 GTHVHALAVKAGAAGDLYVRNAQIHFYGVCGDVAAMRKVFDELPIVRDVVTWNAVLAGYV 210
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G+V A EVF + V+D V W+ +I G V+ GE AL +F+ M V+ NE IV
Sbjct: 211 RAGMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALGVFKNMVAQGVKANEAAIVT 270
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
LSA +QLG LE G+++H + + + ++ +G ALI+MYS+CG + A +VF+ M RD
Sbjct: 271 ALSAAAQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMYSKCGSVAAAKEVFDAMPRRD 330
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +NS+I GLA HG +AV++F + +++G PT +TFVGVLNACS GLVD G F+
Sbjct: 331 VFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGVLNACSRTGLVDEGRRYFK 390
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M Y IE ++EHYGC+VDLLSR G +EA + I M+I PD ++ G++LSACK HG +
Sbjct: 391 LMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPPDPVLWGTILSACKRHGLV 450
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
LG + +L++ A G YVLL++ YA + KW E ++R M G K G S +E
Sbjct: 451 DLGITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVRKLMSNRGTSKSAGWSLMEA 510
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ +H+F++GD+ H +IY + + + + GY P VLHDI D EK A+ +HS
Sbjct: 511 HGIVHKFLVGDMNHKDSARIYNMLCTINRRLAEAGYVPDVSSVLHDIGDEEKVHAIKVHS 570
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRN 472
ERLAI YG I + + IR+VKNL VC DCH K++ + R+I+VRD N
Sbjct: 571 ERLAIAYGFIVVEAGSPIRIVKNLSVCGDCHEFSKMVTKVFGREIVVRDAN 621
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 115/277 (41%), Gaps = 50/277 (18%)
Query: 101 LDLFREMQRDNVRPNEVTIVCV---------LSACSQLGALELGRWIHSYMGKHRIDLNH 151
L LF + R N P+ T + +A + + +G +H+ K +
Sbjct: 110 LRLFPRLPRRN--PHSFTFLLASLSNHLDTEPAAAGSIASRFMGTHVHALAVKAGAAGDL 167
Query: 152 IVGGALINMYSRCGDIDKALQVFEEMK-ERDVTTYNSLIAGL---AMHGRSIE------- 200
V A I+ Y CGD+ +VF+E+ RDV T+N+++AG M G + E
Sbjct: 168 YVRNAQIHFYGVCGDVAAMRKVFDELPIVRDVVTWNAVLAGYVRAGMVGVAREVFDGMPV 227
Query: 201 ---------------------AVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
A+ +F+ M+ QG++ + V L+A + GL++ G +
Sbjct: 228 RDEVSWSTVIGGYVKEGEPEVALGVFKNMVAQGVKANEAAIVTALSAAAQLGLLEQG-KF 286
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGR---PEEAYDFITNMKIAPDHIMLGSLLSACK 296
+ + G+ + ++D+ S+ G +E +D + + + M+ L +
Sbjct: 287 VHEVVKRVGMTMSVNLGAALIDMYSKCGSVAAAKEVFDAMPRRDVFAWNSMICGLATHGL 346
Query: 297 IHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSG 333
H +QL E+ C + S T+V + NA + +G
Sbjct: 347 GHDAVQLFEKFVSEGF-CPT--SITFVGVLNACSRTG 380
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/442 (42%), Positives = 293/442 (66%), Gaps = 3/442 (0%)
Query: 50 VVASTVMINCYVE--HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
V +++ Y + G V A ++F ++ KD V + +++ ++G A ++FR +
Sbjct: 218 VSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL 277
Query: 108 QRDNVRP-NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
++ V N +T+ VL A S GAL +G+ IH + + ++ + IVG ++I+MY +CG
Sbjct: 278 VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGR 337
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
++ A + F+ MK ++V ++ ++IAG MHG + +A+E+F MI+ G+RP +TFV VL A
Sbjct: 338 VETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAA 397
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
CSH GL G+ F +M +G+EP +EHYGC+VDLL R G ++AYD I MK+ PD I
Sbjct: 398 CSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSI 457
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
+ SLL+AC+IH ++L E RL + S++ G Y+LLS+ YA +G+WK+ ++R MK
Sbjct: 458 IWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMK 517
Query: 347 EAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH 406
G+ K PG S +E+N E+H F++GD HPQRE+IY+ + EL + + GY +T V H
Sbjct: 518 NRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCH 577
Query: 407 DIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKI 466
D+++ EKE L +HSE+LAI +G+++T P +T+ VVKNLRVC+DCH++IKLI+ I R+
Sbjct: 578 DVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREF 637
Query: 467 IVRDRNRFHHFENGTCSCGDYW 488
+VRD RFHHF++G CSCGDYW
Sbjct: 638 VVRDAKRFHHFKDGGCSCGDYW 659
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 129/242 (53%), Gaps = 10/242 (4%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D+ S+ +I Y G +E+A +VF + ++ V WT+MI G NG A+ LF+++
Sbjct: 109 SDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDL 168
Query: 108 ------QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMY 161
D + + + +V V+SACS++ A L IHS++ K D VG L++ Y
Sbjct: 169 LVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAY 228
Query: 162 SRCGD--IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI-NQGIRPTKV 218
++ G+ + A ++F+++ ++D +YNS+++ A G S EA E+FR ++ N+ + +
Sbjct: 229 AKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAI 288
Query: 219 TFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITN 278
T VL A SH G + +G I + R G+E + I+D+ + GR E A
Sbjct: 289 TLSTVLLAVSHSGALRIGKCIHDQVIR-MGLEDDVIVGTSIIDMYCKCGRVETARKAFDR 347
Query: 279 MK 280
MK
Sbjct: 348 MK 349
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 157/333 (47%), Gaps = 52/333 (15%)
Query: 67 ENAFEVFSR-VKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
+N +F+R V D W ++I L R+G+ A AL F M++ ++ P + C + A
Sbjct: 26 QNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKA 85
Query: 126 CSQLGALELGRWIH--SYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
CS L + G+ H +++ ++ D+ V ALI MYS CG ++ A +VF+E+ +R++
Sbjct: 86 CSSLFDIFSGKQTHQQAFVFGYQSDI--FVSSALIVMYSTCGKLEDARKVFDEIPKRNIV 143
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMI------NQGIRPTKVTFVGVLNACS--------- 228
++ S+I G ++G +++AV +F++++ + + + V V++ACS
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTE 203
Query: 229 --HGGLVDLGFE----IFQSMTRDYG-----------------IEPQIEHYGCIVDLLSR 265
H ++ GF+ + ++ Y ++ Y I+ + ++
Sbjct: 204 SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263
Query: 266 VGRPEEAYD----FITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADS-- 319
G EA++ + N + + I L ++L A G L++G+ I +++ D
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI 323
Query: 320 -GTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
GT ++ + Y G+ + A + +MK V+
Sbjct: 324 VGTSII--DMYCKCGRVETARKAFDRMKNKNVR 354
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 93/161 (57%), Gaps = 7/161 (4%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+DV+ T +I+ Y + G VE A + F R+K K+ WTAMI G +G A+AL+LF M
Sbjct: 320 DDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAM 379
Query: 108 QRDNVRPNEVTIVCVLSACSQLGA-LELGRWIHSYMGKHRID--LNHIVGGALINMYSRC 164
VRPN +T V VL+ACS G +E RW ++ G+ ++ L H G ++++ R
Sbjct: 380 IDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHY--GCMVDLLGRA 437
Query: 165 GDIDKALQVFEEMKER-DVTTYNSLIAGLAMHGRSIEAVEM 204
G + KA + + MK + D ++SL+A +H +++E E+
Sbjct: 438 GFLQKAYDLIQRMKMKPDSIIWSSLLAACRIH-KNVELAEI 477
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/475 (40%), Positives = 293/475 (61%)
Query: 14 LRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVF 73
+R + + L+++Y KCG+ A +FD + +I+ Y + G V+ A +F
Sbjct: 268 IRMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNAIIDGYCKLGHVDVARSLF 327
Query: 74 SRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALE 133
++ +D + + +MI G + +G + AL LF +M+R +R + T+V +L+AC+ LGAL
Sbjct: 328 DQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMRADNFTVVSLLTACASLGALP 387
Query: 134 LGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLA 193
GR +H+ + + ++ + +G AL++MY +CG +D+A VF M ERDV T+ ++IAGLA
Sbjct: 388 HGRALHASIEQRIVEEDVYLGTALLDMYMKCGRVDEATAVFHRMGERDVHTWTAMIAGLA 447
Query: 194 MHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQI 253
+G +A+E F +M G +PT VT++ VL ACSH L+D G F M + + PQ+
Sbjct: 448 FNGMGKDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLDEGRLHFNEMRSLHKLHPQV 507
Query: 254 EHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
EHYGC++DLL+R G +EA + M + P+ ++ GS+LSAC++H + L A+ LL
Sbjct: 508 EHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWGSILSACRVHKNIDLARHAAEHLLK 567
Query: 314 CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDI 373
+ YV L N Y S +W +A ++R M+E GV+K G SSI V ++H+F+ D
Sbjct: 568 LAPEEDAVYVQLYNIYIDSRQWADAKRVRMLMEERGVKKTAGYSSITVAGQVHKFVANDQ 627
Query: 374 RHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLIST 433
HP +I M+E+ +K GYSP T + D+++ EKE AL HSE++AI +GLIS
Sbjct: 628 SHPWTLEIMAMMEEIACRLKSVGYSPVTSRIAVDVDEEEKEQALLAHSEKIAIAFGLISL 687
Query: 434 KPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
P I +VKNLRVC DCHS IKL++ + R+IIVRDR+RFHHF +G CSC D+W
Sbjct: 688 PPSLPIHIVKNLRVCEDCHSAIKLVSQLWNREIIVRDRSRFHHFRDGACSCNDFW 742
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 142/282 (50%), Gaps = 34/282 (12%)
Query: 23 KLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTV 82
L+ +Y G DA + FDE+P + VV +TV I V GL++ A + + ++ V
Sbjct: 145 PLIHMYASMGLTDDARRAFDEIPAKDAVVWATV-IGGLVRWGLLDEARRLLVQAPERNVV 203
Query: 83 CWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM 142
WT++I G R G A A+ F M D V P+EV ++ LSACS+L L+LGR +H +
Sbjct: 204 SWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSACSKLKNLDLGRLLHLLV 263
Query: 143 GKHRIDLNHIVGGALINMYSRCGDI--------------------------------DKA 170
G+ RI + + ALI+MY++CGDI D A
Sbjct: 264 GQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNAIIDGYCKLGHVDVA 323
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
+F++M RDV T+NS+I G GR +A+++F +M G+R T V +L AC+
Sbjct: 324 RSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMRADNFTVVSLLTACASL 383
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
G + G + S+ + +E + ++D+ + GR +EA
Sbjct: 384 GALPHGRALHASIEQRI-VEEDVYLGTALLDMYMKCGRVDEA 424
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 101/242 (41%), Gaps = 53/242 (21%)
Query: 152 IVGGALINMYSRCGDIDKALQVFEEM-------------------------------KER 180
+V LI+MY+ G D A + F+E+ ER
Sbjct: 141 LVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWGLLDEARRLLVQAPER 200
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH----GGLVDLG 236
+V ++ SLIAG + GR +AV F M++ G+ P +V +G L+ACS L
Sbjct: 201 NVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSACSKLKNLDLGRLLH 260
Query: 237 FEIFQSMTR--DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFI-TNMKIAPDHIMLGSLLS 293
+ Q R D + I+ Y D + + + +D + K P + +
Sbjct: 261 LLVGQKRIRMTDNLVVALIDMYAKCGD----IAQAQAVFDAVGRGQKPEPWNAI------ 310
Query: 294 ACKIHGKLQLGE-QIAKRLLDCRSA-DSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
I G +LG +A+ L D A D T+ + Y SG+ ++A+Q+ +M+ G++
Sbjct: 311 ---IDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMR 367
Query: 352 KE 353
+
Sbjct: 368 AD 369
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/442 (42%), Positives = 293/442 (66%), Gaps = 3/442 (0%)
Query: 50 VVASTVMINCYVE--HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
V +++ Y + G V A ++F ++ KD V + +++ ++G A ++FR +
Sbjct: 218 VSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL 277
Query: 108 QRDNVRP-NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
++ V N +T+ VL A S GAL +G+ IH + + ++ + IVG ++I+MY +CG
Sbjct: 278 VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGR 337
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
++ A + F+ MK ++V ++ ++IAG MHG + +A+E+F MI+ G+RP +TFV VL A
Sbjct: 338 VETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAA 397
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
CSH GL G+ F +M +G+EP +EHYGC+VDLL R G ++AYD I MK+ PD I
Sbjct: 398 CSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSI 457
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
+ SLL+AC+IH ++L E RL + S++ G Y+LLS+ YA +G+WK+ ++R MK
Sbjct: 458 IWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMK 517
Query: 347 EAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH 406
G+ K PG S +E+N E+H F++GD HPQRE+IY+ + EL + + GY +T V H
Sbjct: 518 NRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCH 577
Query: 407 DIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKI 466
D+++ EKE L +HSE+LAI +G+++T P +T+ VVKNLRVC+DCH++IKLI+ I R+
Sbjct: 578 DVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREF 637
Query: 467 IVRDRNRFHHFENGTCSCGDYW 488
+VRD RFHHF++G CSCGDYW
Sbjct: 638 VVRDAKRFHHFKDGGCSCGDYW 659
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 129/242 (53%), Gaps = 10/242 (4%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D+ S+ +I Y G +E+A +VF + +D V WT+MI G NG A+ LF+++
Sbjct: 109 SDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLFKDL 168
Query: 108 ------QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMY 161
D + + + +V V+SACS++ A L IHS++ K D VG L++ Y
Sbjct: 169 LVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAY 228
Query: 162 SRCGD--IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI-NQGIRPTKV 218
++ G+ + A ++F+++ ++D +YNS+++ A G S EA E+FR ++ N+ + +
Sbjct: 229 AKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAI 288
Query: 219 TFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITN 278
T VL A SH G + +G I + R G+E + I+D+ + GR E A
Sbjct: 289 TLSTVLLAVSHSGALRIGKCIHDQVIR-MGLEDDVIVGTSIIDMYCKCGRVETARKAFDR 347
Query: 279 MK 280
MK
Sbjct: 348 MK 349
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 157/333 (47%), Gaps = 52/333 (15%)
Query: 67 ENAFEVFSR-VKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
+N +F+R V D W ++I L R+G+ A AL F M++ ++ P + C + A
Sbjct: 26 QNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKA 85
Query: 126 CSQLGALELGRWIH--SYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
CS L + G+ H +++ ++ D+ V ALI MYS CG ++ A +VF+E+ +RD+
Sbjct: 86 CSSLFDIFSGKQTHQQAFVFGYQSDI--FVSSALIVMYSTCGKLEDARKVFDEIPKRDIV 143
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMI------NQGIRPTKVTFVGVLNACS--------- 228
++ S+I G ++G +++AV +F++++ + + + V V++ACS
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTE 203
Query: 229 --HGGLVDLGFE----IFQSMTRDYG-----------------IEPQIEHYGCIVDLLSR 265
H ++ GF+ + ++ Y ++ Y I+ + ++
Sbjct: 204 SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263
Query: 266 VGRPEEAYD----FITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADS-- 319
G EA++ + N + + I L ++L A G L++G+ I +++ D
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI 323
Query: 320 -GTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
GT ++ + Y G+ + A + +MK V+
Sbjct: 324 VGTSII--DMYCKCGRVETARKAFDRMKNKNVR 354
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 93/161 (57%), Gaps = 7/161 (4%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+DV+ T +I+ Y + G VE A + F R+K K+ WTAMI G +G A+AL+LF M
Sbjct: 320 DDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAM 379
Query: 108 QRDNVRPNEVTIVCVLSACSQLGA-LELGRWIHSYMGKHRID--LNHIVGGALINMYSRC 164
VRPN +T V VL+ACS G +E RW ++ G+ ++ L H G ++++ R
Sbjct: 380 IDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHY--GCMVDLLGRA 437
Query: 165 GDIDKALQVFEEMKER-DVTTYNSLIAGLAMHGRSIEAVEM 204
G + KA + + MK + D ++SL+A +H +++E E+
Sbjct: 438 GFLQKAYDLIQRMKMKPDSIIWSSLLAACRIH-KNVELAEI 477
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/441 (43%), Positives = 287/441 (65%), Gaps = 1/441 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D +++ Y + G V A +VF ++ K V W +MI G +NG A++LF MQ
Sbjct: 152 DAYVQAALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQ 211
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
V+P+ T V +LSAC+Q+GA+ LG W+H Y+ ++ DLN ++G AL+NMYSRCG++
Sbjct: 212 DLGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVS 271
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
KA +VF+ M+E+++ + ++I+G MHG +A+E+F EM G RP VTFV VL+AC+
Sbjct: 272 KAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSACA 331
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIA-PDHIM 287
H GLVD G +IF +M ++YG+ P +EH C+VD+L R G EAY FI N P +
Sbjct: 332 HAGLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAV 391
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
++L ACK+H LG ++A+ LL + G YV+LSN YA +G+ +IR M
Sbjct: 392 WTAMLGACKMHKNFDLGVEVAEHLLSIEPENPGHYVMLSNIYALAGRMDRVEKIRNIMIR 451
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
++KE G S+I+V+++++ F +GD HP+ QIY + EL + GY P++E V+H+
Sbjct: 452 NRLKKEVGYSTIDVDHKVYLFSMGDKSHPKTNQIYLYLDELMSRCREAGYIPASESVMHE 511
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
+E+ E+E+AL HSE+LAI +GL+ T IR+VKNLR+C DCH+ IK I+ I R+I
Sbjct: 512 VEEEEREYALRYHSEKLAIAFGLLKTGSGVAIRIVKNLRMCEDCHTAIKYISIIANREIN 571
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
VRDR RFHHF++G+CSC DYW
Sbjct: 572 VRDRLRFHHFKDGSCSCQDYW 592
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 156/347 (44%), Gaps = 36/347 (10%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVEL-YGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
++IH +++ GL RS KL+ Y +LF +P+
Sbjct: 36 QQIHARIIITGLGRTRSLITKLLSFAYAAASPISYTRRLFFSIPK--------------- 80
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
DT + ++I + +L +R M N+ + T
Sbjct: 81 -----------------PDTFLFHSLITLTSKFSFPQESLLCYRRMLLANISSSNYTFSA 123
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V+ + + L A +G IH ++ L+ V AL++ Y++ G + A +VF++M E+
Sbjct: 124 VIKSSADLTAFSIGETIHCHVYICGYGLDAYVQAALVSFYAKSGHVMIARKVFDKMPEKT 183
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +NS+I+G +G EAVE+F M + G++P TFV +L+AC+ G + LGF + +
Sbjct: 184 VVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKPDSSTFVSLLSACAQVGAIGLGFWVHE 243
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK- 300
+ R+ + + ++++ SR G +A + +M+ + + +++S +HG
Sbjct: 244 YIARN-CFDLNVVLGTALMNMYSRCGNVSKAREVFDSME-EKNIVAWTAMISGYGMHGHG 301
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
Q E + D ++ T+V + +A A +G E QI MK+
Sbjct: 302 SQAIELFNEMSFDGPRPNNVTFVAVLSACAHAGLVDEGRQIFTTMKQ 348
>gi|357450099|ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 740
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/463 (42%), Positives = 293/463 (63%), Gaps = 17/463 (3%)
Query: 41 FDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMA-- 98
F + P N V AS ++N Y ++G + + +F R+ D W +++ R+
Sbjct: 280 FLQPPFDNFVQAS--LLNFYAKYGKMCVSRYIFDRINEPDLATWNVILNAYARSSSYHSY 337
Query: 99 -----------RALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRI 147
+L LFR+MQ +RPNEVTIV ++SACS LGA+ G W+H ++ +++I
Sbjct: 338 SNSFDDADFSLESLYLFRDMQVIGIRPNEVTIVALISACSNLGAVSQGFWVHCFVLRNKI 397
Query: 148 DLNHIVGGALINMYSRCGDIDKALQVFEEMKE--RDVTTYNSLIAGLAMHGRSIEAVEMF 205
+N VG A ++MYS+CG ++ A QVF++M E RD Y ++I G A+HG +A+E++
Sbjct: 398 KMNRFVGTAFVDMYSKCGCLNLACQVFDKMPENDRDSFCYTAMIGGFAVHGYGNQALELY 457
Query: 206 REMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSR 265
R+M +G+ P TFV + ACSH GLV+ G EIF+SM +G+EP++EHYGC++DLL R
Sbjct: 458 RKMKFKGLVPDSATFVVTMFACSHVGLVEEGLEIFKSMKEVHGVEPKLEHYGCLIDLLGR 517
Query: 266 VGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLL 325
GR +EA +++ +M + P+ ++ SLL A +IHG L +GE +L++ SG YVLL
Sbjct: 518 AGRLKEAEEWLADMPMKPNAVLWRSLLGAARIHGNLGVGEVALTKLIELEPETSGNYVLL 577
Query: 326 SNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKM 385
SN YAS G+ + ++R MK GV K PG S +E+ +HEF+ GD HP ++IY K+
Sbjct: 578 SNMYASVGRVNDVKRVRKLMKHHGVNKLPGFSLVEIKGAMHEFLTGDRSHPFSKEIYLKI 637
Query: 386 QELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNL 445
E+ ++ G+ T L D+E+ +KE L+ HSERLAI + LI++ IR++KNL
Sbjct: 638 AEINSRLEEYGHKARTSEALFDLEEEDKEGVLSYHSERLAIAFALIASPSSLAIRIIKNL 697
Query: 446 RVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
RVC DCH+ KLI+ R+IIVRDRNRFHHF++G+CSC DYW
Sbjct: 698 RVCGDCHAFTKLISVAYHREIIVRDRNRFHHFKDGSCSCLDYW 740
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 34/199 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN-DVVASTVMINC 59
+G +H VL+ ++ NR V++Y KCG A Q+FD+MPE + D T MI
Sbjct: 384 QGFWVHCFVLRNKIKMNRFVGTAFVDMYSKCGCLNLACQVFDKMPENDRDSFCYTAMIGG 443
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
+ HG A E++ ++K K GLV P+ T
Sbjct: 444 FAVHGYGNQALELYRKMKFK----------GLV---------------------PDSATF 472
Query: 120 VCVLSACSQLGALELGRWIHSYMGK-HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
V + ACS +G +E G I M + H ++ G LI++ R G + +A + +M
Sbjct: 473 VVTMFACSHVGLVEEGLEIFKSMKEVHGVEPKLEHYGCLIDLLGRAGRLKEAEEWLADMP 532
Query: 179 ER-DVTTYNSLIAGLAMHG 196
+ + + SL+ +HG
Sbjct: 533 MKPNAVLWRSLLGAARIHG 551
>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
gi|194705708|gb|ACF86938.1| unknown [Zea mays]
gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/440 (42%), Positives = 272/440 (61%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D V + + + Y + G +++A VF R+ V+D V WTAM+D G LF M
Sbjct: 196 DAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFDAGRDGEGFRLFVRMM 255
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
R + PNE T VL AC++ + +LG+ +H M K R + G AL++MYS+ GD+
Sbjct: 256 RSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGDMG 315
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A++VF M + D+ ++ ++I+G A +G+ EA+ F +++ G RP VTFVGVL+AC+
Sbjct: 316 TAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSACA 375
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLVD G IF S+ YGIE +HY C++DLLSR G E A D I M + P+ +
Sbjct: 376 HAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSRSGLFERAEDMINTMPVKPNKFLW 435
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
SLL C+IH ++L A+ L + + TYV L+N YAS G + E +R M+
Sbjct: 436 ASLLGGCRIHKNVRLAWWAAEALFEIEPENPATYVTLANIYASVGLFDEVENMRRTMELR 495
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
G+ K P S IEV +H F++GD HPQ E+IY +++L ++ EGY T VLHD+
Sbjct: 496 GITKMPASSWIEVGTRVHVFLVGDKSHPQAEEIYALLKKLYVKMREEGYVADTGFVLHDV 555
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
ED +K+ + HSERLA+ +G+I+T + I+V KNLR+C DCH+ IKLI+ I +R+IIV
Sbjct: 556 EDEQKQQDIGYHSERLAVAFGIIATPKGSPIKVFKNLRICGDCHTTIKLISKIVQREIIV 615
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD NRFHHF+NG+CSC DYW
Sbjct: 616 RDSNRFHHFKNGSCSCRDYW 635
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 147/336 (43%), Gaps = 40/336 (11%)
Query: 14 LRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVF 73
L SNR L L DA+ L +P + +T++ + +A +F
Sbjct: 61 LLSNRILHL----LSSHPATLPDALALLSSLPSTDVCSYNTLVAALGRSPRGLASARALF 116
Query: 74 SRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD---NVRPNEVTIVCVLSACSQLG 130
R+ +D W+A++ VR+G+ AL ++R M R+ + NE T L+A +
Sbjct: 117 DRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSALAAATAAR 176
Query: 131 ALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIA 190
GR +H ++ + ID + +V AL +MY++ G +D A VF+ M RDV ++ +++
Sbjct: 177 CARAGRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLD 236
Query: 191 GLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRD---- 246
GR E +F M+ GI P + T+ GVL AC+ LG ++ M +
Sbjct: 237 RYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGD 296
Query: 247 --------------YG------------IEPQIEHYGCIVDLLSRVGRPEEA---YDFIT 277
YG +P + + ++ ++ G+P+EA +D +
Sbjct: 297 SCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLL 356
Query: 278 NMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
+ PDH+ +LSAC G + G I + D
Sbjct: 357 SSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKD 392
>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Cucumis sativus]
Length = 611
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/489 (40%), Positives = 297/489 (60%), Gaps = 3/489 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H + + + + L+++Y KCG+ DA +FD + N V + T MI+ Y
Sbjct: 124 GKQVHARFMLSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSV-SWTSMISGYA 182
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR-PNEVTIV 120
G A ++F + V++ WTA+I GL+++G + LF EM+R+ + + + +
Sbjct: 183 RSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLS 242
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+ C+ L LELG+ IH + + + AL++MY++C DI A +F M +
Sbjct: 243 SVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRK 302
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++ S+I G A HG++ EA+ ++ EM+ I+P +VTFVG+L ACSH GLV G E+F
Sbjct: 303 DVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELF 362
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+SMT DY I P ++HY C++DLLSR G +EA + + + PD SLLSAC H
Sbjct: 363 RSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNN 422
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
L++G +IA R+LD + D TY+LLSN YA + W ++R M V+KEPG SSI+
Sbjct: 423 LEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSID 482
Query: 361 VNNEIHEFILGD-IRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
+ F G+ HP + +I +++L ++ GY P+T VL+DIE EKE L
Sbjct: 483 FGKDSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFW 542
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSERLA+ YGL+ P T IR+VKNLR+C DCH+++K I++I KR+I+VRD R+HHF+
Sbjct: 543 HSERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKE 602
Query: 480 GTCSCGDYW 488
G CSC D+W
Sbjct: 603 GKCSCNDFW 611
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 121/538 (22%), Positives = 210/538 (39%), Gaps = 130/538 (24%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
E+H Q++K G + L+++YGKCG A+QLFDEMP
Sbjct: 24 ELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPN----------------- 66
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPNEVTIVCV 122
+D V W +++ + R L + M D ++P+ C+
Sbjct: 67 ---------------RDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACI 111
Query: 123 LSACSQLGALELGRWIHS-YMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+ ACS LG L LG+ +H+ +M D + +V +LI+MY++CG D A VF+ + ++
Sbjct: 112 VRACSSLGYLRLGKQVHARFMLSFFCD-DEVVKSSLIDMYTKCGQPDDARAVFDSILFKN 170
Query: 182 VTTYNSLIAGLAMHGRSIEAVE-------------------------------MFREMIN 210
++ S+I+G A GR EA++ +F EM
Sbjct: 171 SVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRR 230
Query: 211 QGIRPT-KVTFVGVLNACS-----------HGGLVDLGFE-------------------- 238
+GI + V+ C+ HG ++ LGFE
Sbjct: 231 EGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDIL 290
Query: 239 ----IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSL 291
IF M R + + I+ ++ G+ EEA YD + +I P+ + L
Sbjct: 291 AAKDIFYRMPRK-----DVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGL 345
Query: 292 LSACKIHGKLQLGEQIAKRLLDCRSADSGT--YVLLSNAYASSGKWKEAVQIRAKMKEAG 349
L AC G + G ++ + + S + Y L + + SG EA + K+
Sbjct: 346 LYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFK- 404
Query: 350 VQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIE 409
EP +S+ + +RH E ++ +++ L+ PST ++L ++
Sbjct: 405 -PDEPTWASL---------LSACMRHNNLEM---GVRIADRVLDLKPEDPSTYILLSNVY 451
Query: 410 DWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCN---DC-HSMIKLIANITK 463
+ W +L + Y++I K+ +V + C H M I N+ K
Sbjct: 452 AGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHPMKNEICNLLK 509
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L C++ + +HS + K D + ++ L+++Y +CG I +ALQ+F+EM RD
Sbjct: 10 LQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDH 69
Query: 183 TTYNSLIAGLAMHGRSI---EAVEMFREMINQ-GIRPTKVTFVGVLNACSHGGLVDLGFE 238
++ S+ L H +++ + M M G++P F ++ ACS G + LG +
Sbjct: 70 VSWASI---LTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQ 126
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
+ + + ++ ++D+ ++ G+P++A
Sbjct: 127 VHARFMLSFFCDDEVVK-SSLIDMYTKCGQPDDA 159
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/489 (40%), Positives = 296/489 (60%), Gaps = 33/489 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG ++H +LKLGL ++ + L+ +YGKCGE + + C
Sbjct: 149 EGMQVHAHILKLGLENDVFVQNSLISMYGKCGE---------------------IGVCC- 186
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV-RPNEVTI 119
VF ++ + W+A+I G + L L +M + R E +
Sbjct: 187 ----------AVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESIL 236
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V VLSAC+ LGAL+LGR +H ++ ++ LN IV +LI MY +CG + K + +F++M +
Sbjct: 237 VSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGSLYKGMCLFQKMAK 296
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
++ +Y+ +I+GLAMHG E + +F EM+ QG+ P + +VGVLNACSH GLV G +
Sbjct: 297 KNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQC 356
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F M ++GIEP I+HYGC+VDL+ R G+ +EA + I +M + P+ ++ SLLSA K+H
Sbjct: 357 FNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVHN 416
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
LQ GE AK+L S + YV+LSN YA + +W++ + R M G+ + PG S +
Sbjct: 417 NLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVAKTRTNMFSKGLSQRPGFSLV 476
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
EV ++H F+ D HPQ E +Y+ + +++ +K EGYSP T VL D+++ EK+ L+
Sbjct: 477 EVKRKMHRFVSQDAGHPQSESVYEMLYQMEWQLKFEGYSPDTTQVLCDVDEEEKKQRLSG 536
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HS++LAI Y LI T + IR+V+NLR+CNDCH+ KLI+ I R+I VRDR+RFHHF++
Sbjct: 537 HSQKLAIAYALIHTSQGSPIRIVRNLRMCNDCHTYTKLISIIFDREITVRDRHRFHHFKD 596
Query: 480 GTCSCGDYW 488
G CSC DYW
Sbjct: 597 GACSCRDYW 605
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 167/336 (49%), Gaps = 12/336 (3%)
Query: 25 VELYGKCG---EFKDAMQLFDEMPECND-VVASTVMINCYV-EHGLVENAFEVFSRVKVK 79
V L KC EFK + ++ D AS ++ C + + G ++ A +F ++
Sbjct: 35 VSLLKKCSNMEEFKQSHARILKLGLFGDSFCASNLVATCALSDWGSMDYACSIFRQMDEL 94
Query: 80 DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIH 139
+ + M+ G V++ AL ++EM V+P+ T +L AC++L A+E G +H
Sbjct: 95 GSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVH 154
Query: 140 SYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSI 199
+++ K ++ + V +LI+MY +CG+I VFE+M ER V ++++LI A G
Sbjct: 155 AHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWS 214
Query: 200 EAVEMFREMINQGI-RPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDY-GIEPQIEHYG 257
+ + + +M N+G R + V VL+AC+H G +DLG + + R+ G+ +E
Sbjct: 215 DCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVE--T 272
Query: 258 CIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD-CRS 316
++++ + G + M + + ++S +HG + G +I +L+
Sbjct: 273 SLIEMYLKCGSLYKGMCLFQKMA-KKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLE 331
Query: 317 ADSGTYVLLSNAYASSGKWKEAVQIRAKMK-EAGVQ 351
D YV + NA + +G +E +Q +MK E G++
Sbjct: 332 PDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIE 367
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/490 (40%), Positives = 296/490 (60%), Gaps = 7/490 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRL--KLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINC 59
G+++H VL+ R + S LV LY KCG+F +A +F++MP D+V+ +++
Sbjct: 305 GKQVHAYVLR---REDFSFHFDNSLVSLYYKCGKFDEARAIFEKMP-AKDLVSWNALLSG 360
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
YV G + A +F +K K+ + W MI GL NG L LF M+R+ P +
Sbjct: 361 YVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAF 420
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+ +C+ LGA G+ H+ + K D + G ALI MY++CG +++A QVF M
Sbjct: 421 SGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC 480
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
D ++N+LIA L HG EAV+++ EM+ +GIRP ++T + VL ACSH GLVD G +
Sbjct: 481 LDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKY 540
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F SM Y I P +HY ++DLL R G+ +A I ++ P + +LLS C++HG
Sbjct: 541 FDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHG 600
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
++LG A +L GTY+LLSN +A++G+W+E ++R M++ GV+KE CS I
Sbjct: 601 NMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWI 660
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIE-DWEKEWALA 418
E+ ++H F++ D HP+ E +Y +Q+L + ++ GY P T VLHD+E D KE L
Sbjct: 661 EMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLT 720
Query: 419 IHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFE 478
HSE++A+ +GL+ P TTIR+ KNLR C DCH+ + ++ + +R II+RDR RFHHF
Sbjct: 721 THSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFR 780
Query: 479 NGTCSCGDYW 488
NG CSCG++W
Sbjct: 781 NGECSCGNFW 790
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 180/390 (46%), Gaps = 48/390 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
R +HG ++ G + +L+++Y K E A QLFDE+ E D +A T M++ Y
Sbjct: 33 ARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISE-PDKIARTTMVSGYC 91
Query: 62 EHGLVENAFEVFSRVKV--KDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
G + A VF + V +DTV + AMI G N + A++LF +M+ + +P+ T
Sbjct: 92 ASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTF 151
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHI--VGGALINMYSRCGD----IDKALQV 173
VL+ + L A + + + + + +I V AL+++YS+C + A +V
Sbjct: 152 ASVLAGLA-LVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKV 210
Query: 174 FEEMKERD--------------------------------VTTYNSLIAGLAMHGRSIEA 201
F+E+ E+D + YN++I+G G EA
Sbjct: 211 FDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEA 270
Query: 202 VEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVD 261
+EM R M++ GI + T+ V+ AC+ GL+ LG ++ + R ++ +V
Sbjct: 271 LEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDN--SLVS 328
Query: 262 LLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT 321
L + G+ +EA M A D + +LLS G + + I K + + + +
Sbjct: 329 LYYKCGKFDEARAIFEKMP-AKDLVSWNALLSGYVSSGHIGEAKLIFKEM---KEKNILS 384
Query: 322 YVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
++++ + A +G +E +++ + MK G +
Sbjct: 385 WMIMISGLAENGFGEEGLKLFSCMKREGFE 414
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 171/358 (47%), Gaps = 18/358 (5%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGE----FKDAMQLFDEMPECNDVVASTVMINC 59
+ H LK G S LV +Y KC A ++FDE+ E D + T M+
Sbjct: 170 QFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILE-KDERSWTTMMTG 228
Query: 60 YVEHGLVENAFEVFSRVKVK-DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVT 118
YV++G + E+ + V + AMI G V G AL++ R M + +E T
Sbjct: 229 YVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFT 288
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
V+ AC+ G L+LG+ +H+Y+ + R D + +L+++Y +CG D+A +FE+M
Sbjct: 289 YPSVIRACATAGLLQLGKQVHAYVLR-REDFSFHFDNSLVSLYYKCGKFDEARAIFEKMP 347
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
+D+ ++N+L++G G EA +F+EM + I ++++ +++ + G + G +
Sbjct: 348 AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI----LSWMIMISGLAENGFGEEGLK 403
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITN-MKIAPDHIMLG--SLLSAC 295
+F M R+ G EP + + + +G + +KI D + +L++
Sbjct: 404 LFSCMKRE-GFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMY 462
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
G ++ Q+ R + C DS ++ L A G EAV + +M + G++ +
Sbjct: 463 AKCGVVEEARQVF-RTMPC--LDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPD 517
>gi|297800868|ref|XP_002868318.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
lyrata]
gi|297314154|gb|EFH44577.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/489 (40%), Positives = 304/489 (62%), Gaps = 4/489 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H + ++ + LV++Y KC A +FD + + ++ T M++ Y
Sbjct: 61 GKQVHCHFIVSEYSNDDVVKSSLVDMYAKCRLLDCAKAVFDSI-RVKNTISWTAMVSGYA 119
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR-PNEVTIV 120
+ G E A E+F R+ VK+ WTA+I G V++G+ A +F EM+R+ V + + +
Sbjct: 120 KSGRKEEALELFRRLPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLS 179
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
++ AC+ L A GR +H + D + ALI+MY++C D+ A +F M+ R
Sbjct: 180 SIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHR 239
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++ SLI G+A HG++ +A+ ++ EM++ G++P +VTFVG++ ACSH G V G E+F
Sbjct: 240 DVVSWTSLIVGMAQHGQAEKALALYDEMVSHGVKPNEVTFVGLIYACSHVGFVAKGRELF 299
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
QSMT+DYGI P ++HY C++DLL R G +EA + I M PD +LLSACK G+
Sbjct: 300 QSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGQ 359
Query: 301 LQLGEQIAKRLLDC-RSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
Q+G +IA L+ + D TY+LLSN YAS+ W + + R K+ + V+K+PG SS+
Sbjct: 360 GQMGVRIADHLVSSFKPKDPSTYILLSNIYASASLWGKVSEARRKLGDMEVRKDPGYSSV 419
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKL-EGYSPSTEVVLHDIEDWEKEWALA 418
EV E F G+ H +E I++ +++L++ +++ GY P T +LHD+++ EKE L
Sbjct: 420 EVRKETEVFYAGETSHALKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLF 479
Query: 419 IHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFE 478
HSER A+ YGL+ P T IR+VKNLRVC DCH ++K I+ IT+R+IIVRD R+HHF+
Sbjct: 480 WHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFK 539
Query: 479 NGTCSCGDY 487
G CSC D+
Sbjct: 540 GGKCSCNDF 548
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 86/169 (50%), Gaps = 5/169 (2%)
Query: 79 KDTVCWTAMIDGLVRNGEMARAL-DLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRW 137
+D + W +++ L + + L +RP++ ++ AC+ LG+++LG+
Sbjct: 4 RDHIAWASVLTALNQANLSGKTLWVFSSVGSSSGLRPDDFVFSALVKACANLGSIKLGKQ 63
Query: 138 IHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR 197
+H + + +V +L++MY++C +D A VF+ ++ ++ ++ ++++G A GR
Sbjct: 64 VHCHFIVSEYSNDDVVKSSLVDMYAKCRLLDCAKAVFDSIRVKNTISWTAMVSGYAKSGR 123
Query: 198 SIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRD 246
EA+E+FR + + + ++ +++ G F +F M R+
Sbjct: 124 KEEALELFRRLPVKNL----YSWTALISGFVQSGKGLEAFSVFTEMRRE 168
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/487 (40%), Positives = 304/487 (62%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H V + G+ + + L+++Y KCG+ A ++FD + + MI+ Y
Sbjct: 256 GRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYC 315
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G V+ A +F +++ +D V + ++I G + G + AL LF +M+R ++R + T+V
Sbjct: 316 KLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVS 375
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+AC+ LGAL GR +H+ + + ++++ +G AL++MY +CG +++A VF+ M RD
Sbjct: 376 LLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRD 435
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V T++++IAGLA +G A+E F M G +P VT++ +L ACSH L+D G F+
Sbjct: 436 VHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFE 495
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M + I P IEHYGC++DLL R G +EA D + M + P+ ++ S+LSAC++H
Sbjct: 496 EMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILSACRVHKDA 555
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
L A+ LL + YV L N Y S +W++A QIR M+E GV+K G SSI V
Sbjct: 556 NLARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQWEDASQIRRLMEERGVKKAAGYSSITV 615
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
++H+FI+ D HPQ +I M+E+ + +K GYSP T + D+++ EKE AL HS
Sbjct: 616 AGQVHKFIVCDRTHPQIMEITAMMEEITRRLKSVGYSPITSQITVDVDEEEKEHALLAHS 675
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E++AI +GLIS P + ++KNLRVC DCHS IKLI+ I R+IIVRDR+RFHHF +GT
Sbjct: 676 EKIAIAFGLISLAPNLPLHIIKNLRVCEDCHSAIKLISRIWNREIIVRDRSRFHHFRDGT 735
Query: 482 CSCGDYW 488
CSC D+W
Sbjct: 736 CSCNDFW 742
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 132/508 (25%), Positives = 221/508 (43%), Gaps = 73/508 (14%)
Query: 23 KLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTV 82
++ +Y + G DA + FD++P D VA T +I+ + GL+++A+ + ++ +
Sbjct: 145 PIIHMYVELGLAGDARRAFDDIP-VKDAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVI 203
Query: 83 CWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM 142
WT +I G R G A A+D F M D + P+EVT++ +LSAC+QL L GR +H +
Sbjct: 204 SWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLV 263
Query: 143 GKHRIDLNHIVGGALINMYSRCGDIDKALQV----------------------------- 173
G+ + ++ + ALI+MY++CGDI +A +V
Sbjct: 264 GEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVA 323
Query: 174 ---FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
F++M++RD+ T+NSLI G GR EA+ +F +M +R T V +L AC+
Sbjct: 324 RYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASL 383
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI---M 287
G + G + + + +E I ++D+ + GR EEA M + H M
Sbjct: 384 GALPQGRALHACIEQRL-VEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAM 442
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK- 346
+ L A GK L E +D +S TY+ + A + S E +M+
Sbjct: 443 IAGL--AFNGMGKAAL-EYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRL 499
Query: 347 -------------------EAGVQKEP----GCSSIEVNNEIHEFILGDIRHPQREQIYK 383
+G+ E ++ N I IL R + + +
Sbjct: 500 LHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILSACRVHKDANLAR 559
Query: 384 KMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRV-- 441
E ++KLE + V L++I ++W A RL G+ Y++I V
Sbjct: 560 NAAE--HLLKLEPDEDAVYVQLYNIYIDSRQWEDASQIRRLMEERGVKKAAGYSSITVAG 617
Query: 442 -VKNLRVCNDCHSMI----KLIANITKR 464
V VC+ H I ++ IT+R
Sbjct: 618 QVHKFIVCDRTHPQIMEITAMMEEITRR 645
>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/436 (44%), Positives = 276/436 (63%), Gaps = 7/436 (1%)
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-----QRDN--V 112
YV ++ A VF + + W MI G +G +L+L+ +M + DN V
Sbjct: 521 YVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGV 580
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
PN V+I+ VL AC LGAL G W HSY+ + + + +V A+++MYS+CG +D A
Sbjct: 581 IPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARC 640
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
+F+E +D+ ++++IA +HG +A+++F +M+ G+RP+ VTF VL+ACSH GL
Sbjct: 641 LFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGL 700
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
++ G FQ MT ++ I ++ +Y C+VDLL R G+ EA D I NM + PD + GSLL
Sbjct: 701 LEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLL 760
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
AC+IH L L E+IA L +G +VLLSN YA+ +W E ++R M G K
Sbjct: 761 GACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANK 820
Query: 353 EPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE 412
G S +E +N++H+F +GD HPQ E++Y K++EL +K GY P T+ VLHDIE+
Sbjct: 821 IQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEA 880
Query: 413 KEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRN 472
KE AL+ HSERLAI +GLI+T P TT+R+ KNLR+C DCH+ IKLI+ I R I+VRD +
Sbjct: 881 KEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDMH 940
Query: 473 RFHHFENGTCSCGDYW 488
RFH FE+G CSCGDYW
Sbjct: 941 RFHRFEDGVCSCGDYW 956
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 117/227 (51%), Gaps = 38/227 (16%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE-----------HGLVENAFEV 72
L+ LY K G K A LF +MPE DV++ + MI CY H ++E FE
Sbjct: 212 LLNLYAKTGCEKIAANLFSKMPE-KDVISWSTMIACYANNEAANEALNLFHEMIEKRFEP 270
Query: 73 FSRVKV------------------------KDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
S V KD V W A++ G +NG +++ +FR M
Sbjct: 271 NSVTVVSALQACAVSRNLEEGKKIHKIAVWKDVVSWVALLSGYAQNGMAYKSMGVFRNML 330
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
D ++P+ V +V +L+A S+LG + +H Y+ + + N VG +LI +YS+CG +
Sbjct: 331 SDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLG 390
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN--QGI 213
A+++F+ M RDV ++S+IA +HGR EA+E+F +MI QGI
Sbjct: 391 DAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQGI 437
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 148/356 (41%), Gaps = 46/356 (12%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
++H QV K G+ + KL LY KC + A ++FDE P N
Sbjct: 22 QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPN--------------- 66
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ-RDNVRPNEVTIVCV 122
W + + R + L LF M P+ TI
Sbjct: 67 -----------------VHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIA 109
Query: 123 LSACSQLGALELGRWIHSYMGKH-RIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
L AC+ L LELG+ IH + K+ I + VG AL+ +YS+CG + +AL+VFEE + D
Sbjct: 110 LKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPD 169
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFV-GVLNACSHGGLVDLGFEIF 240
+ S++ G + EA+ +F +M+ + V +LN + G + +F
Sbjct: 170 TVLWTSMVTGYQQNNDPEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLF 229
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKI 297
M E + + ++ + EA + M + P+ + + S L AC +
Sbjct: 230 SKMP-----EKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAV 284
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
L+ G++I K + D ++V L + YA +G +++ + M G+Q +
Sbjct: 285 SRNLEEGKKIHKIAV---WKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPD 337
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 143/335 (42%), Gaps = 73/335 (21%)
Query: 2 GREIHGQVLKLG-LRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVAST------ 54
G+ IHG K + S+ LVELY KCG+ +A+++F+E + V+ ++
Sbjct: 122 GKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQ 181
Query: 55 ---------------VMINC--------------YVEHGLVENAFEVFSRVKVKDTVCWT 85
VM++C Y + G + A +FS++ KD + W+
Sbjct: 182 QNNDPEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWS 241
Query: 86 AMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKH 145
MI N AL+LF EM PN VT+V L AC+ LE G+ IH
Sbjct: 242 TMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHK----- 296
Query: 146 RIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMF 205
+ V+ +DV ++ +L++G A +G + +++ +F
Sbjct: 297 -------------------------IAVW-----KDVVSWVALLSGYAQNGMAYKSMGVF 326
Query: 206 REMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSR 265
R M++ GI+P V V +L A S G+ + + R G + +++L S+
Sbjct: 327 RNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRS-GFNSNVFVGASLIELYSK 385
Query: 266 VGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
G +A M I D ++ S+++A IHG+
Sbjct: 386 CGSLGDAVKLFKGM-IVRDVVIWSSMIAAYGIHGR 419
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 12/204 (5%)
Query: 4 EIHGQVLKLGLRS-------NRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVAS 53
E++ ++++ GL+ NR + L ++ G G + + + D++ +
Sbjct: 563 ELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVA 622
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
T +++ Y + G ++ A +F KD VCW+AMI +G +A+DLF +M + VR
Sbjct: 623 TAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVR 682
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGA-LINMYSRCGDIDKALQ 172
P+ VT CVLSACS G LE G+ M + + + A ++++ R G + +A+
Sbjct: 683 PSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVD 742
Query: 173 VFEEMK-ERDVTTYNSLIAGLAMH 195
+ E M E D + + SL+ +H
Sbjct: 743 LIENMPVEPDASIWGSLLGACRIH 766
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 8/232 (3%)
Query: 138 IHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR 197
+HS + K I + L ++Y++C + A +VF+E +V +NS + +
Sbjct: 23 LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQ 82
Query: 198 SIEAVEMFREMI-NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHY 256
E + +F MI G P T L AC+ +++LG I ++ I +
Sbjct: 83 WEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVG 142
Query: 257 GCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG----KLQLGEQIAKRLL 312
+V+L S+ G+ EA + PD ++ S+++ + + L L Q+ ++
Sbjct: 143 SALVELYSKCGQMGEALKVFEEFQ-RPDTVLWTSMVTGYQQNNDPEEALALFSQMV--MM 199
Query: 313 DCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNE 364
DC D L N YA +G K A + +KM E V + NNE
Sbjct: 200 DCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNE 251
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/469 (40%), Positives = 283/469 (60%), Gaps = 34/469 (7%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
L+++Y KC FK A +FD++P ++ ++ V
Sbjct: 452 LIDMYSKCRSFKAARSIFDDIP------------------------------LEERNVVT 481
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRD--NVRPNEVTIVCVLSACSQLGALELGRWIHSY 141
WT MI G + G+ AL LF EM + V PN TI C+L AC+ L A+ +G+ IH+Y
Sbjct: 482 WTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAY 541
Query: 142 MGKH-RIDLN-HIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSI 199
+ +H R + + + V LI+MYS+CGD+D A VF+ M ++ ++ S++ G MHGR
Sbjct: 542 VLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGS 601
Query: 200 EAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI 259
EA+++F +M G P +TF+ VL ACSH G+VD G F SM+ DYG+ P+ EHY C
Sbjct: 602 EALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACA 661
Query: 260 VDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADS 319
+DLL+R GR ++A+ + +M + P ++ +LLSAC++H ++L E +L++ + +
Sbjct: 662 IDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAEND 721
Query: 320 GTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQRE 379
G+Y L+SN YA++G+WK+ +IR MK++G++K PGCS ++ F +GD HP
Sbjct: 722 GSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSP 781
Query: 380 QIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTI 439
QIY ++ L +K GY P T LHD+++ EK L HSE+LA+ YGL++T P I
Sbjct: 782 QIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPI 841
Query: 440 RVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
R+ KNLRVC DCHS I+ I +I+VRD +RFHHF+NG+CSCG YW
Sbjct: 842 RITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 890
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 171/319 (53%), Gaps = 21/319 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+ +E+HG ++ G + L++ Y KCG ++A+++F+ M E DVV+ M+ Y
Sbjct: 283 QTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMM-EFKDVVSWNAMVAGY 341
Query: 61 VEHGLVENAFEVFSRVKVK----DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
+ G E AFE+F ++ + D V WTA+I G + G AL+LFR+M PN
Sbjct: 342 SQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNC 401
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKH-RIDLNHIVGG---------ALINMYSRCGD 166
VTI+ VLSAC+ LGA G IH+Y K+ + L++ GG ALI+MYS+C
Sbjct: 402 VTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRS 461
Query: 167 IDKALQVFEE--MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ--GIRPTKVTFVG 222
A +F++ ++ER+V T+ +I G A +G S +A+++F EMI++ G+ P T
Sbjct: 462 FKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISC 521
Query: 223 VLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYG-CIVDLLSRVGRPEEAYDFITNMKI 281
+L AC+H + +G +I + R + E C++D+ S+ G + A +M
Sbjct: 522 ILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMS- 580
Query: 282 APDHIMLGSLLSACKIHGK 300
I S+++ +HG+
Sbjct: 581 QKSAISWTSMMTGYGMHGR 599
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 96/437 (21%), Positives = 170/437 (38%), Gaps = 120/437 (27%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G HG + G SN LV +Y +CG ++A +FDE+
Sbjct: 174 GSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEI----------------- 216
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM------QRDNVRPN 115
++ + D + W +++ V++ ALDLF +M + N R +
Sbjct: 217 ------------TQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 264
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
++IV +L AC L A+ + +H ++ + VG ALI+ Y++CG ++ A++VF
Sbjct: 265 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFN 324
Query: 176 EMKERDVTTYNSLIAGLAMHGR-----------------------------------SIE 200
M+ +DV ++N+++AG + G S E
Sbjct: 325 MMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHE 384
Query: 201 AVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI--------FQSMTRDYGIEPQ 252
A+ +FR+MI G P VT + VL+AC+ G G EI ++ D+G E +
Sbjct: 385 ALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDE 444
Query: 253 -IEHYGCIVDLLSRV---------------------------------GRPEEAYDFITN 278
+ Y ++D+ S+ G +A
Sbjct: 445 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 504
Query: 279 M-----KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVL---LSNAYA 330
M +AP+ + +L AC +++G+QI +L +S Y + L + Y+
Sbjct: 505 MISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYS 564
Query: 331 SSGKWKEAVQIRAKMKE 347
G A + M +
Sbjct: 565 KCGDVDTARHVFDSMSQ 581
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 144/316 (45%), Gaps = 14/316 (4%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
T ++ Y+ G + A V RV V W +I ++ G + A+++ M R R
Sbjct: 93 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 152
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
P+ T+ VL AC +L + G H + + + N + AL+ MYSRCG +++A +
Sbjct: 153 PDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 212
Query: 174 FEEMKER---DVTTYNSLIAGLAMHGRSIEAVEMFREM-INQGIRPTK-----VTFVGVL 224
F+E+ +R DV ++NS+++ + A+++F +M + +PT ++ V +L
Sbjct: 213 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL 272
Query: 225 NACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPD 284
AC V E+ + R+ G P + ++D ++ G E A + NM D
Sbjct: 273 PACGSLKAVPQTKEVHGNAIRN-GTFPDVFVGNALIDAYAKCGLMENAVK-VFNMMEFKD 330
Query: 285 HIMLGSLLSACKIHGKLQLGEQIAKRLL-DCRSADSGTYVLLSNAYASSGKWKEAVQIRA 343
+ ++++ G + ++ K + + D T+ + Y+ G EA+ +
Sbjct: 331 VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFR 390
Query: 344 KMKEAGVQKEPGCSSI 359
+M +G P C +I
Sbjct: 391 QMIFSG--SLPNCVTI 404
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/521 (39%), Positives = 306/521 (58%), Gaps = 34/521 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDV---------- 50
EG ++HG V+K+GL + + L+ Y +CG ++F+ M E N V
Sbjct: 149 EGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYA 208
Query: 51 --------------VASTVMINC----YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLV 92
+ + VM+N Y++ G ++ A +F ++ V + ++
Sbjct: 209 RGDRPKEAVSLFFEMLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYA 268
Query: 93 RNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGR-----WIHSYMGKHRI 147
R G AL + EM + RP+ VT++ +SA +QL L G+ W+H+Y+ K+ I
Sbjct: 269 RQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGI 328
Query: 148 DLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
+ + AL++M++RCGD A+QVF +M ERDV+ + + I +AM G A +F +
Sbjct: 329 PCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQ 388
Query: 208 MINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
M+ QG++P V FV VL ACSHGG V+ G IF S+ D+GI PQIEHYGC+VDLL R G
Sbjct: 389 MLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIF-SLMEDHGISPQIEHYGCMVDLLGRAG 447
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSN 327
EA+D I +M + P+ ++ GSLL+AC++H +++ A+R+ + +G +VLLSN
Sbjct: 448 LLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSN 507
Query: 328 AYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQE 387
YAS+GKW + ++R ++E GV+K PG SS++VN IHEF GD HP+ I +QE
Sbjct: 508 IYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQE 567
Query: 388 LKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRV 447
+ G+ P VL D+++ EKE+ L+ HSE+LAI +GLI+T IRVVKNLR+
Sbjct: 568 MNCRFSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRM 627
Query: 448 CNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
C+DCHS K+ + I R+IIVRD NRFH F G CSC DYW
Sbjct: 628 CSDCHSFAKMASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 668
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 155/379 (40%), Gaps = 57/379 (15%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
+++H Q+ K GL ST KLV + PE D
Sbjct: 42 KQLHCQITKNGLDQIPSTLTKLVNAGAEIAS-----------PESLD------------- 77
Query: 63 HGLVENAFEVFSR-VKVKDTV-CWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
AFE+F V+ D + ++I G G A+ L+ M V PN T
Sbjct: 78 --YARKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFP 135
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLS C+++ A G +H + K ++ + + LI+ Y+ CG +D +VFE M ER
Sbjct: 136 FVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSER 195
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+V ++ SLI G A R EAV +F EM+N KV +++ G +D +F
Sbjct: 196 NVVSWTSLICGYARGDRPKEAVSLFFEMLN------KVMVNALVDMYMKCGAIDAAKRLF 249
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACK- 296
D ++ + Y I+ +R G EA + M PD + + S +SA
Sbjct: 250 -----DECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQ 304
Query: 297 ----IHGKLQLG----EQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+GK+ G I K + C D L + +A G + A+Q+ KM E
Sbjct: 305 LVDLFYGKVCHGYWVHTYIEKNGIPC---DMRLNTALVDMFARCGDPQSAMQVFNKMTER 361
Query: 349 GVQ---KEPGCSSIEVNNE 364
V G ++E N E
Sbjct: 362 DVSAWTAAIGTMAMEGNGE 380
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/437 (43%), Positives = 283/437 (64%), Gaps = 2/437 (0%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
T +++ YV+ G V+ A +VFS + KD V W+AM+ G + GE A+ +F E+ + V+
Sbjct: 436 TALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVK 495
Query: 114 PNEVTIVCVLSACSQLGA-LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
PNE T +L+ C+ A + G+ H + K R+D + V AL+ MY++ G I+ A +
Sbjct: 496 PNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEE 555
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
VF+ +E+D+ ++NS+I+G A HG++++A+++F+EM + ++ VTF+GV AC+H GL
Sbjct: 556 VFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGL 615
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
V+ G + F M RD I P EH C+VDL SR G+ E+A I NM + ++L
Sbjct: 616 VEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTIL 675
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
+AC++H K +LG A++++ DS YVLLSN YA SG W+E ++R M E V+K
Sbjct: 676 AACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKK 735
Query: 353 EPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE 412
EPG S IEV N+ + F+ GD HP ++QIY K+++L +K GY P T VL DI+D
Sbjct: 736 EPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEH 795
Query: 413 KEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRN 472
KE LA HSERLAI +GLI+T + + ++KNLRVC DCH +IKLIA I +R+I+VRD N
Sbjct: 796 KEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHVVIKLIAKIEEREIVVRDSN 855
Query: 473 RFHHF-ENGTCSCGDYW 488
RFHHF +G CSCGD+W
Sbjct: 856 RFHHFSSDGVCSCGDFW 872
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 169/374 (45%), Gaps = 71/374 (18%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
++H V+K G +++ R L+ Y KC DA++LF E +VV+
Sbjct: 320 QLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVS----------- 368
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
WTAMI G ++N A+ LF EM+R VRPNE T +L
Sbjct: 369 --------------------WTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVIL 408
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
+A + E +H+ + K + + VG AL++ Y + G +D+A +VF + +D+
Sbjct: 409 TALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIV 464
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS------------HGG 231
+++++AG A G + A+++F E+ G++P + TF +LN C+ HG
Sbjct: 465 AWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGF 524
Query: 232 LV----DLGFEIFQSMTRDYGIEPQIE---------------HYGCIVDLLSRVGRPEEA 272
+ D + ++ Y + IE + ++ ++ G+ +A
Sbjct: 525 AIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKA 584
Query: 273 YDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL-DCRSADSGTY-VLLSN 327
D M K+ D + + +AC G ++ GE+ ++ DC+ A + + + +
Sbjct: 585 LDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVD 644
Query: 328 AYASSGKWKEAVQI 341
Y+ +G+ ++A+++
Sbjct: 645 LYSRAGQLEKAMKV 658
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 157/374 (41%), Gaps = 69/374 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H Q +K G + S LV+ Y K FKD
Sbjct: 116 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRN---------------------- 153
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
VF +K ++ V WT +I G RN L LF MQ + +PN T
Sbjct: 154 ----------VFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAA 203
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
L ++ G G +H+ + K+ +D V +LIN+Y +CG++ KA +F++ + +
Sbjct: 204 ALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKS 263
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HG 230
V T+NS+I+G A +G +EA+ MF M +R ++ +F ++ C+ H
Sbjct: 264 VVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHC 323
Query: 231 GLVDLGFEIFQS--------------------MTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
+V GF Q+ + ++ G + + ++ + E
Sbjct: 324 SVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKE 383
Query: 271 EAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSN 327
EA + MK + P+ +L+A + ++ Q+ K + RS+ GT +L +
Sbjct: 384 EAVGLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYE-RSSTVGTALL--D 440
Query: 328 AYASSGKWKEAVQI 341
AY GK EA ++
Sbjct: 441 AYVKLGKVDEAAKV 454
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 85/148 (57%), Gaps = 2/148 (1%)
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
S+ ++ Y + G +E+A EVF R + KD V W +MI G ++G+ +ALD+F+EM++ V
Sbjct: 537 SSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKV 596
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKH-RIDLNHIVGGALINMYSRCGDIDKAL 171
+ + VT + V +AC+ G +E G M + +I ++++YSR G ++KA+
Sbjct: 597 KMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAM 656
Query: 172 QVFEEMKE-RDVTTYNSLIAGLAMHGRS 198
+V + M T + +++A +H ++
Sbjct: 657 KVIDNMPNLAGSTIWRTILAACRVHKKT 684
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/461 (41%), Positives = 284/461 (61%), Gaps = 2/461 (0%)
Query: 28 YGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAM 87
Y G +DA + F+ MP V+A MI E G + A VF +++ +D W M
Sbjct: 244 YTLSGRIEDAEEFFEVMP-MKPVIACNAMIVALGEVGEIVKARRVFDQMEDRDNATWRGM 302
Query: 88 IDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRI 147
I R G AL+LF +MQR VRP+ +++ +LS C+ L +L+ GR +H+++ + +
Sbjct: 303 IKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQF 362
Query: 148 DLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
D + V L+ MY +CG++ KA VF+ +D+ +NS+I+G A HG EA+++F E
Sbjct: 363 DGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHE 422
Query: 208 MINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
M G P KVT + +L ACS+GG ++ G EIF+SM + + P +EHY C VD+L R G
Sbjct: 423 MPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAG 482
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSN 327
+ ++A + I +M I PD + G+LL ACK H +L L E AK+L + ++G Y+LLS+
Sbjct: 483 KVDKAMELINSMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPENAGPYILLSS 542
Query: 328 AYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIR-HPQREQIYKKMQ 386
AS KW + ++R M+ V K PGCS IEV ++H F G IR HP++ I ++
Sbjct: 543 INASRSKWGDVAEMRKNMRTKNVSKFPGCSWIEVGKKVHMFTRGGIRNHPEQAMILMMLE 602
Query: 387 ELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLR 446
+ +++ GYSP VLHD+++ EK +L+ HSERLA+ YGL+ IRV+KNLR
Sbjct: 603 KTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLR 662
Query: 447 VCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDY 487
VC DCH+ IKLI+ +T+R+II+RD NRFHHF NG CSC DY
Sbjct: 663 VCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDY 703
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 134/309 (43%), Gaps = 42/309 (13%)
Query: 32 GEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGL 91
G DA +L+D MP DVVAST MI G V+ A E+F ++ ++ + WT MI G
Sbjct: 155 GRIDDARKLYDMMP-GKDVVASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTMITGY 213
Query: 92 VRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH 151
+N + A LF M EV+ +L + G +E M +
Sbjct: 214 GQNKRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPV---- 265
Query: 152 IVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ 211
I A+I G+I KA +VF++M++RD T+ +I G +EA+E+F +M Q
Sbjct: 266 IACNAMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQ 325
Query: 212 GIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR-------------------------- 245
G+RP+ + + +L+ C+ + G ++ + R
Sbjct: 326 GVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKA 385
Query: 246 ----DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIA---PDHIMLGSLLSACKIH 298
D I + I+ + G EEA M ++ P+ + L ++L+AC
Sbjct: 386 KLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYG 445
Query: 299 GKLQLGEQI 307
GKL+ G +I
Sbjct: 446 GKLEEGLEI 454
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 157/351 (44%), Gaps = 55/351 (15%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
+V Y G ++A Q+FDEMPE N +V+ +++ Y+++ ++E A VF + ++ V
Sbjct: 54 IVSGYFANGLPREARQMFDEMPERN-IVSWNGLVSGYIKNRMIEEARNVFEIMPERNVVS 112
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM- 142
WTAM+ G V+ G + A LF M NEV+ + G ++ R ++ M
Sbjct: 113 WTAMVKGYVQEGMVVEAELLFWRMPER----NEVSWTVMFGGLIDGGRIDDARKLYDMMP 168
Query: 143 GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAV 202
GK + +++GG R G +D+A ++F+EM+ER+V T+ ++I G + R A
Sbjct: 169 GKDVVASTNMIGG-----LCREGRVDEAREIFDEMRERNVITWTTMITGYGQNKRVDVAR 223
Query: 203 EMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDL 262
++F M + T+V++ +L + G ++ E F+ M ++P I IV L
Sbjct: 224 KLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVMP----MKPVIACNAMIVAL 275
Query: 263 ------------------------------LSRVGRPEEAYDFITNMK---IAPDHIMLG 289
R G EA + M+ + P L
Sbjct: 276 GEVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLI 335
Query: 290 SLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV--LLSNAYASSGKWKEA 338
S+LS C LQ G Q+ L+ C+ D YV +L Y G+ +A
Sbjct: 336 SILSVCATLASLQYGRQVHAHLVRCQ-FDGDVYVASVLMTMYVKCGELVKA 385
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 34/198 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H +++ + L+ +Y KCGE A +FD P D++ +I+ Y
Sbjct: 350 GRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPS-KDIIMWNSIISGYA 408
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HGL E A +V F EM PN+VT++
Sbjct: 409 SHGLGEEALKV-------------------------------FHEMPLSGTMPNKVTLIA 437
Query: 122 VLSACSQLGALELGRWIHSYM-GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
+L+ACS G LE G I M K + ++M R G +DKA+++ M +
Sbjct: 438 ILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIK 497
Query: 180 RDVTTYNSLIAGLAMHGR 197
D T + +L+ H R
Sbjct: 498 PDATVWGALLGACKTHSR 515
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 132/328 (40%), Gaps = 53/328 (16%)
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV----------- 112
G + A + F ++ K W +++ G NG A +F EM N+
Sbjct: 31 GQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDEMPERNIVSWNGLVSGYI 90
Query: 113 ----------------RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGA 156
N V+ ++ Q G + + M + ++ G
Sbjct: 91 KNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFGG 150
Query: 157 LINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPT 216
LI+ G ID A ++++ M +DV ++I GL GR EA E+F EM + +
Sbjct: 151 LID----GGRIDDARKLYDMMPGKDVVASTNMIGGLCREGRVDEAREIFDEMRERNV--- 203
Query: 217 KVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRV--GRPEEAYD 274
+T+ ++ VD+ ++F+ M P+ LL GR E+A +
Sbjct: 204 -ITWTTMITGYGQNKRVDVARKLFEVM-------PEKTEVSWTSMLLGYTLSGRIEDAEE 255
Query: 275 FITNMKIAPDHIMLGSLLSACKIHGKLQLGEQI-AKRLLD-CRSADSGTYVLLSNAYASS 332
F M + P I +++ A ++GE + A+R+ D D+ T+ + AY
Sbjct: 256 FFEVMPMKP-VIACNAMIVALG-----EVGEIVKARRVFDQMEDRDNATWRGMIKAYERK 309
Query: 333 GKWKEAVQIRAKMKEAGVQKE-PGCSSI 359
G EA+++ A+M+ GV+ P SI
Sbjct: 310 GFELEALELFAQMQRQGVRPSFPSLISI 337
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 158 INMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTK 217
I+ SR G I++A + F+ ++ + + ++NS+++G +G EA +MF EM + I
Sbjct: 24 ISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDEMPERNI---- 79
Query: 218 VTFVGVLNACSHGGLVDLGFEIFQSM 243
V++ G+++ +++ +F+ M
Sbjct: 80 VSWNGLVSGYIKNRMIEEARNVFEIM 105
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 12/189 (6%)
Query: 123 LSACSQLGAL-ELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+S S++G + E ++ S K N IV G N R +A Q+F+EM ER+
Sbjct: 24 ISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPR-----EARQMFDEMPERN 78
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++N L++G + EA +F M + + V++ ++ G+V +F
Sbjct: 79 IVSWNGLVSGYIKNRMIEEARNVFEIMPERNV----VSWTAMVKGYVQEGMVVEAELLFW 134
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M + + +G ++D R+ + YD + + M+G L ++
Sbjct: 135 RMPERNEVSWTV-MFGGLID-GGRIDDARKLYDMMPGKDVVASTNMIGGLCREGRVDEAR 192
Query: 302 QLGEQIAKR 310
++ +++ +R
Sbjct: 193 EIFDEMRER 201
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/469 (40%), Positives = 283/469 (60%), Gaps = 34/469 (7%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
L+++Y KC FK A +FD++P ++ ++ V
Sbjct: 459 LIDMYSKCRSFKAARSIFDDIP------------------------------LEERNVVT 488
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRD--NVRPNEVTIVCVLSACSQLGALELGRWIHSY 141
WT MI G + G+ AL LF EM + V PN TI C+L AC+ L A+ +G+ IH+Y
Sbjct: 489 WTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAY 548
Query: 142 MGKH-RIDLN-HIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSI 199
+ +H R + + + V LI+MYS+CGD+D A VF+ M ++ ++ S++ G MHGR
Sbjct: 549 VLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGS 608
Query: 200 EAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI 259
EA+++F +M G P +TF+ VL ACSH G+VD G F SM+ DYG+ P+ EHY C
Sbjct: 609 EALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACA 668
Query: 260 VDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADS 319
+DLL+R GR ++A+ + +M + P ++ +LLSAC++H ++L E +L++ + +
Sbjct: 669 IDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAEND 728
Query: 320 GTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQRE 379
G+Y L+SN YA++G+WK+ +IR MK++G++K PGCS ++ F +GD HP
Sbjct: 729 GSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSP 788
Query: 380 QIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTI 439
QIY ++ L +K GY P T LHD+++ EK L HSE+LA+ YGL++T P I
Sbjct: 789 QIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPI 848
Query: 440 RVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
R+ KNLRVC DCHS I+ I +I+VRD +RFHHF+NG+CSCG YW
Sbjct: 849 RITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 897
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 171/319 (53%), Gaps = 21/319 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+ +E+HG ++ G + L++ Y KCG ++A+++F+ M E DVV+ M+ Y
Sbjct: 290 QTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMM-EFKDVVSWNAMVAGY 348
Query: 61 VEHGLVENAFEVFSRVKVK----DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
+ G E AFE+F ++ + D V WTA+I G + G AL+LFR+M PN
Sbjct: 349 SQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNC 408
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKH-RIDLNHIVGG---------ALINMYSRCGD 166
VTI+ VLSAC+ LGA G IH+Y K+ + L++ GG ALI+MYS+C
Sbjct: 409 VTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRS 468
Query: 167 IDKALQVFEE--MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ--GIRPTKVTFVG 222
A +F++ ++ER+V T+ +I G A +G S +A+++F EMI++ G+ P T
Sbjct: 469 FKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISC 528
Query: 223 VLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYG-CIVDLLSRVGRPEEAYDFITNMKI 281
+L AC+H + +G +I + R + E C++D+ S+ G + A +M
Sbjct: 529 ILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMS- 587
Query: 282 APDHIMLGSLLSACKIHGK 300
I S+++ +HG+
Sbjct: 588 QKSAISWTSMMTGYGMHGR 606
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/437 (21%), Positives = 170/437 (38%), Gaps = 120/437 (27%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G HG + G SN LV +Y +CG ++A +FDE+
Sbjct: 181 GSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEI----------------- 223
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM------QRDNVRPN 115
++ + D + W +++ V++ ALDLF +M + N R +
Sbjct: 224 ------------TQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 271
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
++IV +L AC L A+ + +H ++ + VG ALI+ Y++CG ++ A++VF
Sbjct: 272 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFN 331
Query: 176 EMKERDVTTYNSLIAGLAMHGR-----------------------------------SIE 200
M+ +DV ++N+++AG + G S E
Sbjct: 332 MMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHE 391
Query: 201 AVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI--------FQSMTRDYGIEPQ 252
A+ +FR+MI G P VT + VL+AC+ G G EI ++ D+G E +
Sbjct: 392 ALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDE 451
Query: 253 -IEHYGCIVDLLSRV---------------------------------GRPEEAYDFITN 278
+ Y ++D+ S+ G +A
Sbjct: 452 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 511
Query: 279 M-----KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVL---LSNAYA 330
M +AP+ + +L AC +++G+QI +L +S Y + L + Y+
Sbjct: 512 MISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYS 571
Query: 331 SSGKWKEAVQIRAKMKE 347
G A + M +
Sbjct: 572 KCGDVDTARHVFDSMSQ 588
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 144/316 (45%), Gaps = 14/316 (4%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
T ++ Y+ G + A V RV V W +I ++ G + A+++ M R R
Sbjct: 100 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 159
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
P+ T+ VL AC +L + G H + + + N + AL+ MYSRCG +++A +
Sbjct: 160 PDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 219
Query: 174 FEEMKER---DVTTYNSLIAGLAMHGRSIEAVEMFREM-INQGIRPTK-----VTFVGVL 224
F+E+ +R DV ++NS+++ + A+++F +M + +PT ++ V +L
Sbjct: 220 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL 279
Query: 225 NACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPD 284
AC V E+ + R+ G P + ++D ++ G E A + NM D
Sbjct: 280 PACGSLKAVPQTKEVHGNAIRN-GTFPDVFVGNALIDAYAKCGLMENAVK-VFNMMEFKD 337
Query: 285 HIMLGSLLSACKIHGKLQLGEQIAKRLL-DCRSADSGTYVLLSNAYASSGKWKEAVQIRA 343
+ ++++ G + ++ K + + D T+ + Y+ G EA+ +
Sbjct: 338 VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFR 397
Query: 344 KMKEAGVQKEPGCSSI 359
+M +G P C +I
Sbjct: 398 QMIFSG--SLPNCVTI 411
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/441 (43%), Positives = 280/441 (63%), Gaps = 2/441 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+DV + +I+ Y G +ENA VF + D V W+++I G +N + AL LF+ M
Sbjct: 96 SDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRM 155
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+R + T+ VL AC+ L LELGR +H ++ K+ DL I+ AL++MY +CG +
Sbjct: 156 KRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLKYDQDL--ILNNALLDMYCKCGSL 213
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+ A VF M E+DV +++++IAGLA +G S EA+++F M GI+P VT VGVL AC
Sbjct: 214 EDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFAC 273
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SH GLV+ G F SM +GI+P EHYGC++DLL R GR EA D I M+ PD +
Sbjct: 274 SHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVT 333
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+LL+AC++H + + AK++L D+GTYVLLSN YA++ +W + ++R M
Sbjct: 334 WRALLNACRVHRNVDVAIHAAKQILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTN 393
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
G++KEPGCS IEV+ +IH FILGD HPQ +I ++ +L + GY P T VL D
Sbjct: 394 RGIKKEPGCSWIEVSKQIHAFILGDRSHPQIREINIQLNQLIYKLMGVGYVPDTNFVLQD 453
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
+E + + +L HSE+LAI +GL+S TIR+ KNLR+C DCH KL+A + +R I+
Sbjct: 454 LEGEQMQDSLRYHSEKLAIVFGLMSLPRGQTIRIRKNLRICGDCHLFTKLLAKMEQRIIV 513
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
+RD R+HHF++G CSCGD+W
Sbjct: 514 IRDPVRYHHFQDGLCSCGDFW 534
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 178/395 (45%), Gaps = 50/395 (12%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
++IN YV+ GL+ +A +VF ++ ++ V WT MI +AL+ M R+ VR
Sbjct: 4 NILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVR 63
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
PN T VL AC L L R +H + K +D + V ALI++YSR G+++ AL+V
Sbjct: 64 PNMFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRV 120
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV 233
F+EM D+ ++S+IAG A + EA+ +F+ M G + T VL AC+ L+
Sbjct: 121 FDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALL 180
Query: 234 DLGFEIF-------QSMTRDYG---------------------IEPQIEHYGCIVDLLSR 265
+LG ++ Q + + +E + + ++ L++
Sbjct: 181 ELGRQVHVHVLKYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQ 240
Query: 266 VGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT- 321
G +EA +MK I P+++ + +L AC G ++ G + + D G
Sbjct: 241 NGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGRE 300
Query: 322 -YVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQ 380
Y + + +G+ EAV + +M + EP + +L R +
Sbjct: 301 HYGCMIDLLGRAGRLSEAVDLINEM-----ECEPDAVTWRA-------LLNACRVHRNVD 348
Query: 381 IYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
+ + KQI++L+ T V+L +I + W
Sbjct: 349 V--AIHAAKQILRLDPQDAGTYVLLSNIYANTQRW 381
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/440 (42%), Positives = 275/440 (62%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D +I+ Y + G + +A +VF ++ +D + W MI G +NG AL +MQ
Sbjct: 722 DTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQ 781
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
V N+ + V +L+ACS ALE G+ +H+ + K ++ + VG ALI+MY++CG ++
Sbjct: 782 EQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLE 841
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+A +VF+ E++V T+N++I A HG + +A++ F M +GI+P TF +L+AC+
Sbjct: 842 EAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACN 901
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLV G IF S+ +G+ P IEHYGC+V LL R GR +EA I M PD +
Sbjct: 902 HSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVW 961
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+LL AC+IHG + L E A L + + YVLLSN YA++G+W + +IR M+
Sbjct: 962 ETLLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGR 1021
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
G++KEPG S IEV+N IHEFI D HP+ +IY++++ L ++ GYSP T+ VLH++
Sbjct: 1022 GIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEMERAGYSPDTQYVLHNL 1081
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
+ +E +L HSERLAI YGL+ T P T IR+ KNLR+C DCH+ K I+ + R+II
Sbjct: 1082 DKEHQETSLCTHSERLAIAYGLLKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIA 1141
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD NRFH F+NG CSC D+W
Sbjct: 1142 RDSNRFHTFKNGKCSCEDFW 1161
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 181/386 (46%), Gaps = 45/386 (11%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFK--DAMQLF----DEMPECNDVVAST 54
E E + Q+ G+ NR+T L ++ C K A +L E+ +DV
Sbjct: 368 EAFEQYYQMRSDGVVMNRTTYLSVLN---ACSTSKALGAGELIHSHISEVGHSSDVQIGN 424
Query: 55 VMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP 114
+I+ Y G + A E+F+ + +D + W A+I G R + A+ L+++MQ + V+P
Sbjct: 425 SLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKP 484
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
VT + +LSAC+ A G+ IH + + I N + AL+NMY RCG I +A VF
Sbjct: 485 GRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVF 544
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
E + RD+ ++NS+IAG A HG A ++F EM +G+ P K+TF VL C + ++
Sbjct: 545 EGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALE 604
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK-------------- 280
LG +I + + G++ + ++++ R G ++AY+ +++
Sbjct: 605 LGRQI-HMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGF 663
Query: 281 --------------------IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC-RSADS 319
P S+L AC L G+++ +L+ D+
Sbjct: 664 ADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDT 723
Query: 320 GTYVLLSNAYASSGKWKEAVQIRAKM 345
G L +AY+ SG +A ++ KM
Sbjct: 724 GVGNALISAYSKSGSMTDARKVFDKM 749
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 163/342 (47%), Gaps = 42/342 (12%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCG---EFKDAMQLFDEMPECNDVVASTVMINCYV 61
+ GQ+ G+ ++ T + L++ + E K +L +D+ T + +V
Sbjct: 271 LFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFV 330
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G V A + +D V + A+I L ++G A + + +M+ D V N T +
Sbjct: 331 RCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLS 390
Query: 122 VLSACSQLGALELGRWIHSYMGK--HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
VL+ACS AL G IHS++ + H D+ +G +LI+MY+RCGD+ +A ++F M +
Sbjct: 391 VLNACSTSKALGAGELIHSHISEVGHSSDVQ--IGNSLISMYARCGDLPRARELFNTMPK 448
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
RD+ ++N++IAG A EA++++++M ++G++P +VTF+ +L+AC++ G I
Sbjct: 449 RDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMI 508
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRV-------------------------------GR 268
+ + R GI+ ++++ R G
Sbjct: 509 HEDILRS-GIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGS 567
Query: 269 PEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQI 307
E AY MK + PD I S+L CK L+LG QI
Sbjct: 568 YEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQI 609
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 180/376 (47%), Gaps = 15/376 (3%)
Query: 16 SNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMINCYVEHGLVENAFEV 72
+NR+ + LV+ + +A ++ +M E D+ S ++IN YV+ V +A +V
Sbjct: 80 TNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQV 139
Query: 73 FSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGAL 132
F ++ +D + W ++I + G +A LF EMQ P+++T + +L+AC L
Sbjct: 140 FLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAEL 199
Query: 133 ELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGL 192
E G+ IHS + + + V +L+NMY +C D+ A QVF + RDV +YN+++
Sbjct: 200 EYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLY 259
Query: 193 AMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQ 252
A E + +F +M ++GI P KVT++ +L+A + ++D G I + + + G+
Sbjct: 260 AQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHK-LAVNEGLNSD 318
Query: 253 IEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLG-EQIAKRL 311
I + + R G A + D ++ +L++A HG + EQ +
Sbjct: 319 IRVGTALATMFVRCGDVAGAKQALEAFA-DRDVVVYNALIAALAQHGHYEEAFEQYYQMR 377
Query: 312 LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFIL- 370
D + TY+ + NA ++S I + + E G S +++ N +
Sbjct: 378 SDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVG-----HSSDVQIGNSLISMYAR 432
Query: 371 -GDIRHPQREQIYKKM 385
GD+ P+ +++ M
Sbjct: 433 CGDL--PRARELFNTM 446
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 111/246 (45%), Gaps = 13/246 (5%)
Query: 102 DLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMY 161
DL Q N V ++ C++ +L + IH+ M + + + + LINMY
Sbjct: 68 DLSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMY 127
Query: 162 SRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFV 221
+C + A QVF +M RDV ++NSLI+ A G +A ++F EM G P+K+T++
Sbjct: 128 VKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYI 187
Query: 222 GVLNACSHGGLVDLGFEIFQSMTR-DYGIEPQIEH-----YGCIVDLLSRVGRPEEAYDF 275
+L AC ++ G +I + Y +P++++ YG DL S + +
Sbjct: 188 SILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPS----ARQVFSG 243
Query: 276 ITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKW 335
I + + MLG + + L Q++ + D TY+ L +A+ +
Sbjct: 244 IYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGI---PPDKVTYINLLDAFTTPSML 300
Query: 336 KEAVQI 341
E +I
Sbjct: 301 DEGKRI 306
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 85/198 (42%), Gaps = 34/198 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+ +H +++K ++ + L+ +Y KCG ++A ++FD E N VV MIN Y
Sbjct: 807 EGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKN-VVTWNAMINAY 865
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+HGL ++ALD F M ++ ++P+ T
Sbjct: 866 AQHGLA-------------------------------SKALDFFNCMDKEGIKPDGSTFT 894
Query: 121 CVLSACSQLG-ALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
+LSAC+ G +E R S +H + G L+ + R G +A + +M
Sbjct: 895 SILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPF 954
Query: 179 ERDVTTYNSLIAGLAMHG 196
D + +L+ +HG
Sbjct: 955 PPDAAVWETLLGACRIHG 972
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/491 (39%), Positives = 299/491 (60%), Gaps = 3/491 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDA---MQLFDEMPECNDVVASTVMI 57
E ++ +++++G+R + ++++ G+ ++ +EM + T ++
Sbjct: 195 EAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLV 254
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
N Y + G +E A VF + KD V W+ MI G N ++ F +M ++N++P++
Sbjct: 255 NLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQF 314
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+IV LS+C+ LGAL+LG W S + +H N + ALI+MY++CG + + +VF+EM
Sbjct: 315 SIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM 374
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
KE+D+ N+ I+GLA +G + +F + GI P TF+G+L C H GL+ G
Sbjct: 375 KEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGL 434
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F +++ Y ++ +EHYGC+VDL R G ++AY I +M + P+ I+ G+LLS C++
Sbjct: 435 RFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRL 494
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
QL E + K L+ ++G YV LSN Y+ SG+W EA ++R M G++K PG S
Sbjct: 495 VKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYS 554
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IE+ +HEF+ D HP ++IY K+++L ++L G+ P+TE V D+ED EKE L
Sbjct: 555 WIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEDEEKERVL 614
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LA+ +GLIST IRVVKNLRVC DCH ++KLI+ IT+R+I+VRD NRFH F
Sbjct: 615 GHHSEKLAVAFGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCF 674
Query: 478 ENGTCSCGDYW 488
NG+CSC DYW
Sbjct: 675 TNGSCSCNDYW 685
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 159/307 (51%), Gaps = 20/307 (6%)
Query: 2 GREIHGQVLKLGLR-----SNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVM 56
G +HG L L+ SNR + L L KCG F+ +DV A T +
Sbjct: 106 GLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCG--------FN-----HDVAAMTSL 152
Query: 57 INCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
++ Y G + +A +VF + + V WTA+ G G+ A+DLF++M VRP+
Sbjct: 153 LSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDS 212
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
IV VLSAC +G L+ G WI +M + + N V L+N+Y++CG ++KA VF+
Sbjct: 213 YFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDS 272
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
M E+D+ T++++I G A + E +E F +M+ + ++P + + VG L++C+ G +DLG
Sbjct: 273 MGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLG 332
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
E S+ + + ++D+ ++ G ++ MK D +++ + +S
Sbjct: 333 -EWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAISGLA 390
Query: 297 IHGKLQL 303
+G ++L
Sbjct: 391 KNGHVKL 397
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 148/324 (45%), Gaps = 50/324 (15%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
+F +FS + + + +I+G V N LDLF +++ + + T VL AC++
Sbjct: 64 SFLLFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTR 123
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGG--ALINMYSRCGDIDKALQVFEEMKERDVTTYN 186
+LG +HS + K NH V +L+++YS G ++ A +VFEE+ ER V T+
Sbjct: 124 ASNRKLGIDLHSLVVK--CGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWT 181
Query: 187 SLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRD 246
+L +G G+ EA+++F++M+ G+RP V VL+AC H G +D G I + M
Sbjct: 182 ALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEE- 240
Query: 247 YGIEPQIEHY--GCIVDLLSRVGR-------------------------------PEEAY 273
+E Q + +V+L ++ G+ P+E
Sbjct: 241 --MEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGI 298
Query: 274 DFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNA-- 328
+F M + PD + LS+C G L LGE L+D + T + ++NA
Sbjct: 299 EFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEW-GISLID--RHEFLTNLFMANALI 355
Query: 329 --YASSGKWKEAVQIRAKMKEAGV 350
YA G ++ +MKE +
Sbjct: 356 DMYAKCGAMARGFEVFKEMKEKDI 379
>gi|449435366|ref|XP_004135466.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/497 (41%), Positives = 301/497 (60%), Gaps = 44/497 (8%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR+ H Q+ KLGL + L+ LY CG
Sbjct: 144 EGRQAHAQIFKLGLDLDVYVGNSLIHLYASCG---------------------------- 175
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ A +VF ++ ++ V W MID V++G AL LF EMQ ++ P+ T+
Sbjct: 176 ----CLSMALKVFEKMPLRSLVSWNVMIDAYVQSGLFENALKLFVEMQ-NSFEPDGYTMQ 230
Query: 121 CVLSACSQLGALELGRWIHSYM-----GKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
++SAC+ +GAL LG W H+Y+ G D+ ++ +L++MYS+CG + A QVFE
Sbjct: 231 SIVSACAGIGALSLGMWAHAYVLRKASGAMAGDV--LINSSLVDMYSKCGSLRMAQQVFE 288
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN-QGIRPTKVTFVGVLNACSHGGLVD 234
M + D+ ++NS+I LAMHGR A++ F ++ + P VTFVGVL+AC+HGG+V
Sbjct: 289 TMPKHDLNSWNSMILALAMHGRGQAALQCFSRLVEMEKFLPNSVTFVGVLSACNHGGMVA 348
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
G + F M DY IEP++EHYGC+VDLLSR G +EA + + NM I PD ++ SLL A
Sbjct: 349 DGRKYFDMMVNDYKIEPRLEHYGCLVDLLSRSGFIDEALELVANMHIKPDAVIWRSLLDA 408
Query: 295 C-KIHGKLQLGEQIAKRLLDC-RSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
C K + ++L E++A ++L ++ SG YV+LS YAS+ +W + IR M + GV K
Sbjct: 409 CYKQNAGVELSEEVAFKILQSEKTISSGVYVMLSRVYASARQWNDVGIIRKVMTDMGVTK 468
Query: 353 EPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPS-TEVVLHDIEDW 411
EPGCSSIE++ HEF GD HP+ ++IY + +++ ++ GYSP ++ + D D
Sbjct: 469 EPGCSSIEIDGISHEFFAGDTSHPRIKEIYGVIDLIEEKLERRGYSPDCSQATMVDEPDN 528
Query: 412 EKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDR 471
K+ +L +HSERLAI +GL++ KP T +R+ KNLRVCNDCH + KLI+ I +II+RDR
Sbjct: 529 IKQQSLKLHSERLAIAFGLLNLKPGTPVRIFKNLRVCNDCHQVTKLISEIFNVEIIMRDR 588
Query: 472 NRFHHFENGTCSCGDYW 488
NRFHHF++G CSC D+W
Sbjct: 589 NRFHHFKHGMCSCMDFW 605
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 123/257 (47%), Gaps = 22/257 (8%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALD--------LFREMQRDNVRPNEVTIV 120
A VF+++ ++ W +I G AR+LD +R ++ +V P++ T
Sbjct: 77 ACRVFNQIDNPNSFMWNTLI------GACARSLDRKEQAIEIFYRMLEEGSVEPDKHTFP 130
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L AC+ + AL GR H+ + K +DL+ VG +LI++Y+ CG + AL+VFE+M R
Sbjct: 131 FLLKACAYVFALSEGRQAHAQIFKLGLDLDVYVGNSLIHLYASCGCLSMALKVFEKMPLR 190
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+ ++N +I G A+++F EM N P T +++AC+ G + LG
Sbjct: 191 SLVSWNVMIDAYVQSGLFENALKLFVEMQN-SFEPDGYTMQSIVSACAGIGALSLGMWAH 249
Query: 241 QSMTRDY--GIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM--LGSLLSACK 296
+ R + + +VD+ S+ G A M P H + S++ A
Sbjct: 250 AYVLRKASGAMAGDVLINSSLVDMYSKCGSLRMAQQVFETM---PKHDLNSWNSMILALA 306
Query: 297 IHGKLQLGEQIAKRLLD 313
+HG+ Q Q RL++
Sbjct: 307 MHGRGQAALQCFSRLVE 323
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/488 (40%), Positives = 297/488 (60%), Gaps = 2/488 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H + + + + LV++Y KCG A +FD + V+ T M++ Y
Sbjct: 123 GKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSI-LVKTSVSWTAMLSGYA 181
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR-PNEVTIV 120
GL + A E+F R V++ WTA+I GLV++G +F EM+R+ V + + +
Sbjct: 182 RSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLS 241
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+ AC+ L L LG+ IH + + + AL++MY++C DI A VF M R
Sbjct: 242 SVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHR 301
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++ S+I G A HGR+ EA++++ +M+ I+P +VTFVG++ ACSH GLV G ++F
Sbjct: 302 DVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLF 361
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
++M DY I P ++ + C +DLLSR G EA D I M PD +LLSACK HG
Sbjct: 362 KAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGN 421
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++G +IA RLL + TYVLLSN YA +GKW++ ++R M + V+++PG SSI+
Sbjct: 422 TEMGVRIADRLLSLNMHEPSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSSID 481
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+ E F G+ HP +++I+ ++EL ++ GY P T VLHD+E+ EKE L H
Sbjct: 482 LGKESQVFHAGETCHPMKDEIFGLLKELDAEMRKRGYIPDTSYVLHDMEEQEKERELFWH 541
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SER A+ YGL+ P T IR+VKNLR+C DCH+ +KL ++I ++IIVRD R+HHF++G
Sbjct: 542 SERWAVAYGLLKAVPGTVIRIVKNLRICGDCHTFLKLTSSIVHKEIIVRDATRYHHFKDG 601
Query: 481 TCSCGDYW 488
CSC D+W
Sbjct: 602 RCSCNDFW 609
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 109/534 (20%), Positives = 207/534 (38%), Gaps = 119/534 (22%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
++IH Q++K GL + L++ YGKC +DA LFDEMP+
Sbjct: 21 AKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQ--------------- 65
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPNEVTIV 120
+D V W +++ + + L +F M D ++P+
Sbjct: 66 -----------------RDHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYA 108
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI------------- 167
+L AC+ L +L LG+ +H+ + +V +L++MY++CG
Sbjct: 109 TLLKACASLCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSILVK 168
Query: 168 ------------------DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
D+A+++F R++ ++ +LI+GL G I+ MF EM
Sbjct: 169 TSVSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMR 228
Query: 210 NQGIRPT-KVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRV-- 266
+G+ + V+ AC++ ++ LG +I + G E + +VD+ ++
Sbjct: 229 REGVDIVDPLVLSSVVGACANLAVLGLGKQI-HGLVIGSGYESCLFISNALVDMYAKCSD 287
Query: 267 -----------------------------GRPEEAYDFITNM---KIAPDHIMLGSLLSA 294
GR +EA D M +I P+ + L+ A
Sbjct: 288 ILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYA 347
Query: 295 CKIHGKLQLGEQIAKRLL-DCRSADS-GTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
C G + G ++ K ++ D R + S + + + SG EA + M
Sbjct: 348 CSHAGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHK--PD 405
Query: 353 EPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE 412
EP ++ +L +H ++ ++ + +++ L + PST V+L ++
Sbjct: 406 EPTWAA----------LLSACKHHGNTEMGVRIAD--RLLSLNMHEPSTYVLLSNVYAGA 453
Query: 413 KEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCN---DCHSMIKLIANITK 463
+W +L + Y++I + K +V + CH M I + K
Sbjct: 454 GKWEQMSRVRKLMTDMEVKRKPGYSSIDLGKESQVFHAGETCHPMKDEIFGLLK 507
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/488 (38%), Positives = 290/488 (59%), Gaps = 33/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR IH V+K+GL + + L +Y KCG+ A LFD+M
Sbjct: 240 QGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKM---------------- 283
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
K + + W AMI G +NG A+DLF EM +VRP+ ++I
Sbjct: 284 ----------------KSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISIT 327
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+SAC+Q+G+LE RW+ Y+ + + + ALI+M+++CG ++ A VF+ +R
Sbjct: 328 SAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDR 387
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++++I G +HG++ EA+ ++R M G+ P VTF+G+L AC+H G+V G+ F
Sbjct: 388 DVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFF 447
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
M D+ I PQ +HY CI+DLL R G ++AY+ I M + P + G+LLSACK H
Sbjct: 448 NRMA-DHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRH 506
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++LG+ A++L +++G YV LSN YA++ W ++R +MKE G+ K+ GCS +E
Sbjct: 507 VELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVE 566
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
V + F +GD HP+ E+I ++++ ++ +K G+ + + LHD+ D E E L H
Sbjct: 567 VRGRLEGFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSH 626
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SER+ I YGLIST TT+R+ KNLR C +CH+ KLI+ + R+I+VRD NRFHHF++G
Sbjct: 627 SERITIAYGLISTPQGTTLRITKNLRACVNCHAATKLISKLVGREIVVRDTNRFHHFKDG 686
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 687 VCSCGDYW 694
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 155/300 (51%), Gaps = 34/300 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H QV +LG ++ + L+ LY KC A +F+ +P
Sbjct: 138 GRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLP---------------- 181
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ + V WTA++ +NGE AL++F +M++ +V+P+ V +V
Sbjct: 182 --------------LPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVS 227
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL+A + L LE GR IH+ + K ++ + +L MY++CG + A +F++MK +
Sbjct: 228 VLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPN 287
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ +N++I+G A +G + +A+++F EMIN+ +RP ++ ++AC+ G ++ + +
Sbjct: 288 LILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDE 347
Query: 242 SMTR-DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
++R DY + I ++D+ ++ G E A + + + D ++ +++ +HG+
Sbjct: 348 YVSRSDYRDDVFIS--SALIDMFAKCGSVECARS-VFDRTLDRDVVVWSAMIVGYGLHGQ 404
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 146/335 (43%), Gaps = 67/335 (20%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
R+IH ++L LGL+ + KL+ G+ A Q+FD++P
Sbjct: 38 RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRP--------------- 82
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
+VF W A+I G RN AL ++ +MQ V P+ T +
Sbjct: 83 --------QVFP---------WNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHL 125
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE--EMKER 180
L AC L L++GR++H+ + + + + V LI +Y++C + A VFE + ER
Sbjct: 126 LKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPER 185
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------H 229
+ ++ ++++ A +G +EA+E+F +M ++P V V VLNA + H
Sbjct: 186 TIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIH 245
Query: 230 GGLVDLGFE----IFQSMTRDYG---------------IEPQIEHYGCIVDLLSRVGRPE 270
++ +G E + S+ Y P + + ++ ++ G +
Sbjct: 246 ASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAK 305
Query: 271 EAYDF---ITNMKIAPDHIMLGSLLSACKIHGKLQ 302
+A D + N + PD I + S +SAC G L+
Sbjct: 306 DAIDLFHEMINKDVRPDTISITSAISACAQVGSLE 340
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/491 (40%), Positives = 309/491 (62%), Gaps = 9/491 (1%)
Query: 6 HGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQ-------LFDEMPECNDVVASTVMIN 58
HG +K+ L + L LV L + +D + DVV +++
Sbjct: 402 HGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVD 461
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR-DNVRPNEV 117
Y + GL+++A +VF + VKD + W +I G +NG + A+++++ M+ + PN+
Sbjct: 462 MYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQG 521
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T V +L A + +GAL+ G IH + K + L+ V LI++Y +CG + A+ +F ++
Sbjct: 522 TWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQV 581
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
+ T+N++I+ +HG + + +++F EM+++G++P VTFV +L+ACSH G V+ G
Sbjct: 582 PQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGK 641
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F+ M ++YGI+P ++HYGC+VDLL R G E AY FI +M + PD + G+LL AC+I
Sbjct: 642 WCFRLM-QEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRI 700
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
HG ++LG+ + RL + S + G YVLLSN YA+ GKW+ ++R+ +E G++K PG S
Sbjct: 701 HGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWS 760
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
+IEVN ++ F G+ HP+ ++IY++++ L +K GY P VL D+E+ EKE L
Sbjct: 761 TIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHIL 820
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSERLAI +G+IST P + IR+ KNLRVC DCH+ K I+ IT+R+I+VRD NRFHHF
Sbjct: 821 TSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHF 880
Query: 478 ENGTCSCGDYW 488
++G CSCGDYW
Sbjct: 881 KDGICSCGDYW 891
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 162/347 (46%), Gaps = 35/347 (10%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR IH KLG + N L+ +Y + G A LFD+MP
Sbjct: 233 DGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMP--------------- 277
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+D W AMI GL++NG A+ALD+ EM+ + ++ N VT+V
Sbjct: 278 -----------------FRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVV 320
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L C QLG + IH Y+ KH ++ + V ALINMY++ G+++ A + F++M
Sbjct: 321 SILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFIT 380
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++NS+IA + + A F +M G +P +T V + + + +
Sbjct: 381 DVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVH 440
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ R + + +VD+ +++G + A+ + + + D I +L++ +G
Sbjct: 441 GFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHK-VFEIILVKDVISWNTLITGYAQNGL 499
Query: 301 LQLGEQIAKRLLDCRS--ADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
++ K + +C+ + GT+V + AYA G ++ ++I ++
Sbjct: 500 ASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRV 546
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 123/250 (49%), Gaps = 6/250 (2%)
Query: 46 ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
+ + ST ++N Y G V + F ++ KD W +MI V NG A+ F
Sbjct: 147 KVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFY 206
Query: 106 EMQR-DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC 164
++ +RP+ T VL AC G L GR IH + K N V +LI+MYSR
Sbjct: 207 QLLLVSEIRPDFYTFPPVLKAC---GTLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRF 263
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL 224
G A +F++M RD+ ++N++I+GL +G + +A+++ EM +GI+ VT V +L
Sbjct: 264 GFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSIL 323
Query: 225 NACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPD 284
C G + I + + +G+E + ++++ ++ G E+A M I D
Sbjct: 324 PVCPQLGDISTAMLIHLYVIK-HGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFIT-D 381
Query: 285 HIMLGSLLSA 294
+ S+++A
Sbjct: 382 VVSWNSIIAA 391
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 94/197 (47%), Gaps = 33/197 (16%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G IHG+V+K L + L+++YGKCG DAM LF ++P+ + V + + I+C+
Sbjct: 538 QGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAI-ISCH 596
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG E + L LF EM + V+P+ VT V
Sbjct: 597 GIHGHAE-------------------------------KTLKLFGEMLDEGVKPDHVTFV 625
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
+LSACS G +E G+W M ++ I + G ++++ R G ++ A ++M +
Sbjct: 626 SLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQ 685
Query: 180 RDVTTYNSLIAGLAMHG 196
D + + +L+ +HG
Sbjct: 686 PDASIWGALLGACRIHG 702
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/484 (39%), Positives = 289/484 (59%), Gaps = 13/484 (2%)
Query: 13 GLRSNRSTRLKLVELYGKCGEFKDAMQL--------FDEMPECNDVVASTVMINCYVEHG 64
G + T ++ ++ +C + K M + FD NDV + +I+ Y
Sbjct: 165 GFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFD-----NDVFVGSSLIDMYANCT 219
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
++ + +VF D V W +M+ G +NG + AL +FR M + VRP VT ++
Sbjct: 220 QMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIP 279
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
A L L LG+ +H+Y+ + R + N + +LI+MY +CG++D A +VF ++ D+ +
Sbjct: 280 AFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVS 339
Query: 185 YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT 244
+ ++I G A+HG + EA +F M ++P +TF+ VL ACSH GLVD G++ F SM+
Sbjct: 340 WTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMS 399
Query: 245 RDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLG 304
YG P +EH + D L R G +EAY+FI+ MKI P + +LL AC++H L
Sbjct: 400 NQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLA 459
Query: 305 EQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNE 364
E++AK++ + G++V+LSN Y++SG+W EA Q+R M+ G++KEP CS IEV N+
Sbjct: 460 EEVAKKIFELEPKSMGSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNK 519
Query: 365 IHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERL 424
+H FI D HP ++I + + + +GY P+ E VL DIE+ +K L HSE+L
Sbjct: 520 LHVFIAHDKSHPWYDRIIDALNVYSEQMIRQGYVPNMEDVLQDIEEEQKREVLCGHSEKL 579
Query: 425 AICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSC 484
AI +G+IST P TTIRV+KNLRVC DCH K I+ I R+I+VRD NRFH F++G CSC
Sbjct: 580 AIVFGIISTPPGTTIRVMKNLRVCVDCHIATKFISKIVAREIVVRDVNRFHRFKDGNCSC 639
Query: 485 GDYW 488
GD+W
Sbjct: 640 GDFW 643
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 121/243 (49%), Gaps = 6/243 (2%)
Query: 62 EHGLVENAFE----VFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
E GL A+E VF + +D V W +I G + AL + REM RD P+
Sbjct: 112 EGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTF 171
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T+ VL ++ ++ G +H Y K+ D + VG +LI+MY+ C +D +++VF+
Sbjct: 172 TLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSF 231
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
+ D +NS++AG A +G EA+ +FR M+ G+RP VTF ++ A + L+ LG
Sbjct: 232 SDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGK 291
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
++ + R I ++D+ + G + A ++ +PD + +++ +
Sbjct: 292 QLHAYLIRAR-FNDNIFISSSLIDMYCKCGNVDIARRVFNGIQ-SPDIVSWTAMIMGYAL 349
Query: 298 HGK 300
HG
Sbjct: 350 HGP 352
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/442 (42%), Positives = 280/442 (63%), Gaps = 1/442 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
++++ ST +++ Y + G ++ A VF+R+K ++ + WTAM+ GL +NG AL LF +M
Sbjct: 364 SNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQM 423
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
Q + + N VT V ++ +C+ LG+L+ GR IH ++ + + + AL++MY++CG I
Sbjct: 424 QEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKI 483
Query: 168 DKALQVFEEMK-ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+ A ++F +DV +NS+I G MHG +AV ++ +MI +G++P + TF+ +L+A
Sbjct: 484 NLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSA 543
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
CSH LV+ G +F SM RD+ I P +HY C+VDLLSR GR EEA I M P
Sbjct: 544 CSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTA 603
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
+L +LLS C+ H + LG Q + +LL + + G Y++LSN YA + +W + IR M+
Sbjct: 604 VLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNIYAEARRWDKVDYIRGLMR 663
Query: 347 EAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH 406
G++K PG S +E N +H F GD HP E+IY ++ L+ V+ GY P T VL
Sbjct: 664 NRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLESLRSAVETSGYVPDTSCVLR 723
Query: 407 DIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKI 466
D+++ K L HSERLAI +GL++T + IR+ KNLRVC DCH++ K I+ I KR+I
Sbjct: 724 DVDEEMKVRMLWGHSERLAIAFGLLTTPAGSLIRITKNLRVCGDCHTVTKYISKIVKREI 783
Query: 467 IVRDRNRFHHFENGTCSCGDYW 488
IVRD NRFHHF NG CSCGDYW
Sbjct: 784 IVRDANRFHHFSNGECSCGDYW 805
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 147/307 (47%), Gaps = 9/307 (2%)
Query: 46 ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
E N V S+ MI+ V+ G + A VF + KD VCW ++I G V+ G A LF
Sbjct: 162 EKNRFVGSS-MISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFF 220
Query: 106 EMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG 165
EM ++P+ +T+ ++ AC +G L+LG+ +H Y+ + + +V + ++MYS+ G
Sbjct: 221 EMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMG 280
Query: 166 DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
DI+ A VF +M R++ ++N++I+G +G E+ ++F ++ T V +L
Sbjct: 281 DIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQ 340
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IA 282
CS + G + R + E + IVDL S+ G ++A MK +
Sbjct: 341 GCSQTASLATGKILHGCAIRSF--ESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVI 398
Query: 283 PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIR 342
ML L L+L Q+ + + +A+S T+V L ++ A G K I
Sbjct: 399 TWTAMLVGLAQNGHAEDALRLFAQMQEEGI---AANSVTFVSLVHSCAHLGSLKRGRSIH 455
Query: 343 AKMKEAG 349
+ G
Sbjct: 456 GHLFRLG 462
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 105/225 (46%), Gaps = 1/225 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
D +T ++ Y + +E A VF + + AM+ G +++G L+LF M
Sbjct: 62 TDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLM 121
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ N+ + + L AC+ E+G I S + ++ N VG ++I+ + G I
Sbjct: 122 RSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKI 181
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+A +VF+ M +DV +NS+I G G A ++F EM GI+P+ +T ++ AC
Sbjct: 182 GEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQAC 241
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
G + LG + G+ I VD+ S++G E A
Sbjct: 242 GGIGNLKLG-KCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESA 285
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 33/196 (16%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR IHG + +LG + LV++Y KCG+ A ++F
Sbjct: 451 GRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIF-------------------- 490
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG + KD V W +MI G +G +A+ ++ +M + ++PN+ T +
Sbjct: 491 SHGSIS-----------KDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLS 539
Query: 122 VLSACSQLGALELGRWIHSYMGK-HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
+LSACS +E G + + M + H I L+++ SR G ++A + E+M +
Sbjct: 540 LLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQ 599
Query: 180 RDVTTYNSLIAGLAMH 195
+L++G H
Sbjct: 600 PGTAVLEALLSGCRTH 615
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 79/206 (38%), Gaps = 38/206 (18%)
Query: 137 WI---HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLA 193
W+ H+ + + + + V L+ YS ++ A VF++ + N+++ G
Sbjct: 47 WVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYL 106
Query: 194 MHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQI 253
GR E +E+F M ++ + + L AC+ ++G EI S + G+E
Sbjct: 107 QSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAV-EKGMEKNR 165
Query: 254 EHYGCIVDLLSRVGRPEEA---YDFITNMK------------------------------ 280
++ L + G+ EA +D + N
Sbjct: 166 FVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGS 225
Query: 281 -IAPDHIMLGSLLSACKIHGKLQLGE 305
I P I + SL+ AC G L+LG+
Sbjct: 226 GIKPSPITMTSLIQACGGIGNLKLGK 251
>gi|414591914|tpg|DAA42485.1| TPA: pentatricopeptide repeat protein PPR986-12 [Zea mays]
Length = 548
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/451 (44%), Positives = 285/451 (63%), Gaps = 13/451 (2%)
Query: 50 VVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
V + +++ Y G A VF RV + V W +D L NG+ ALDLFREMQR
Sbjct: 99 TVVANSLVHFYASCGRPGAALAVFRRVPDRSLVSWNTAVDALAGNGDHLAALDLFREMQR 158
Query: 110 D--NVRPNEVTIVCVLSACSQLGALELGRWIHSYM-----GKHRIDLNHIVGGALINMYS 162
D ++ P+ T+ VL AC+ GAL LG + H+ + G + + ++ +L+++Y
Sbjct: 159 DRPDLAPDAYTVQSVLGACAATGALSLGLYAHALLLRELGGASAVSRDVLINNSLVDLYG 218
Query: 163 RCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN-QGIRPTKVTFV 221
+CG ++ A QVF+ M ERD+ ++N+++ LA HGR +++++F M +G+ P +TFV
Sbjct: 219 KCGAVELARQVFDRMSERDLASWNAMVLALANHGRVQDSLDLFDRMTRVEGLVPNAITFV 278
Query: 222 GVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKI 281
VL+AC+HGGLVD G F +M ++GI P+IEHYGC+VD+L+R G EEA D + M
Sbjct: 279 AVLSACNHGGLVDEGRRYFAAMVSEHGIRPRIEHYGCMVDILARAGFIEEALDVVAGMNC 338
Query: 282 APDHIMLGSLLSAC-KIHGKLQLGEQIAKRLLDCRS-ADSGTYVLLSNAYASSGKWKEAV 339
PD I+ SLL AC K + L+L E +AK LD A SG YVLLS YAS+ +W +
Sbjct: 339 RPDSIIWRSLLDACCKRNAGLELSEAMAKLALDVPDDAVSGVYVLLSRVYASAQRWNDVG 398
Query: 340 QIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSP 399
IR M + G +KEPG SSIE++ +H+F+ GD HPQ E+IY K+ E++Q + GY P
Sbjct: 399 MIRQLMSQEGFKKEPGFSSIEMDGSVHQFVAGDTSHPQSEEIYVKLDEIQQRLTSAGYKP 458
Query: 400 --STEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKL 457
S ++ DI D K L +HSERLAI +GL++ P IR++KNLRVC DCH++ KL
Sbjct: 459 DLSEAPMVADI-DRTKGATLRLHSERLAISFGLLNATPGAPIRILKNLRVCKDCHTISKL 517
Query: 458 IANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
I+ + +IIVRDR RFHHF++G+CSC DYW
Sbjct: 518 ISKLYNVEIIVRDRIRFHHFKDGSCSCKDYW 548
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 82/146 (56%), Gaps = 7/146 (4%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV+ + +++ Y + G VE A +VF R+ +D W AM+ L +G + +LDLF M
Sbjct: 206 DVLINNSLVDLYGKCGAVELARQVFDRMSERDLASWNAMVLALANHGRVQDSLDLFDRMT 265
Query: 109 R-DNVRPNEVTIVCVLSACSQLGALELG-RWIHSYMGKH--RIDLNHIVGGALINMYSRC 164
R + + PN +T V VLSAC+ G ++ G R+ + + +H R + H G ++++ +R
Sbjct: 266 RVEGLVPNAITFVAVLSACNHGGLVDEGRRYFAAMVSEHGIRPRIEHY--GCMVDILARA 323
Query: 165 GDIDKALQVFEEMKER-DVTTYNSLI 189
G I++AL V M R D + SL+
Sbjct: 324 GFIEEALDVVAGMNCRPDSIIWRSLL 349
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 107/222 (48%), Gaps = 11/222 (4%)
Query: 99 RALDLFREMQ-RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH-IVGGA 156
RAL LFR + + P ++ LSA + L AL GR +H+ K + H +V +
Sbjct: 45 RALLLFRTLHASPSPPPPRYSLPAALSAAAFLAALPEGRQLHALAAKLALAPAHTVVANS 104
Query: 157 LINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ--GIR 214
L++ Y+ CG AL VF + +R + ++N+ + LA +G + A+++FREM +
Sbjct: 105 LVHFYASCGRPGAALAVFRRVPDRSLVSWNTAVDALAGNGDHLAALDLFREMQRDRPDLA 164
Query: 215 PTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEH----YGCIVDLLSRVGRPE 270
P T VL AC+ G + LG + R+ G + +VDL + G E
Sbjct: 165 PDAYTVQSVLGACAATGALSLGLYAHALLLRELGGASAVSRDVLINNSLVDLYGKCGAVE 224
Query: 271 ---EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAK 309
+ +D ++ +A + M+ +L + ++ L L +++ +
Sbjct: 225 LARQVFDRMSERDLASWNAMVLALANHGRVQDSLDLFDRMTR 266
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/485 (39%), Positives = 290/485 (59%), Gaps = 33/485 (6%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
+HG +K G + L++ Y KCGE + ++FD M E
Sbjct: 220 VHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEE------------------ 261
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPNEVTIVCVL 123
D W ++I +NG A LF +M +R VR N VT+ VL
Sbjct: 262 --------------TDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVL 307
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
AC+ GAL++G+ IH + K ++ N +VG ++++MY +CG ++ A + F+ +K ++V
Sbjct: 308 LACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVK 367
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
++ ++AG MHG EA+++F EMI GI+P +TFV VL ACSH GL+ G+ F M
Sbjct: 368 SWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKM 427
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQL 303
++ +EP IEHY C+VDLL R G +EAY I MK+ PD I+ GSLL AC+IH ++L
Sbjct: 428 KCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVEL 487
Query: 304 GEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNN 363
GE A++L ++ G YVLLSN YA +G+W + ++R MK G+ K PG S +E
Sbjct: 488 GEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKG 547
Query: 364 EIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSER 423
+H F++GD HPQ E+IY+ + EL ++ GY P+ VL+D++ EK L +HSE+
Sbjct: 548 RVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMPNVTSVLYDVDVEEKGMVLRVHSEK 607
Query: 424 LAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCS 483
LA+ +G++++ P + I+++KNLR+C DCH IKLI+ I R+I++RD RFHHF++G CS
Sbjct: 608 LAVAFGIMNSVPGSVIQIIKNLRICGDCHFAIKLISKIVNREIVIRDSKRFHHFKDGLCS 667
Query: 484 CGDYW 488
CGDYW
Sbjct: 668 CGDYW 672
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 170/370 (45%), Gaps = 54/370 (14%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G++IH Q G S+ L+++Y KCG DA +LFDE+PE
Sbjct: 105 GKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPE--------------- 149
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR-----------EMQRD 110
++ V WT+MI G V+N A+ LF+ E+
Sbjct: 150 -----------------RNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGV 192
Query: 111 NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
V + V + CV+SAC+++ + +H K + VG L++ Y++CG+I +
Sbjct: 193 GVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVS 252
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSH 229
+VF+ M+E DV ++NSLIA A +G S+EA +F +M+ +G +R VT VL AC+H
Sbjct: 253 RKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAH 312
Query: 230 GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE---EAYDFITNMKIAPDHI 286
G + +G I + + +E + IVD+ + GR E +A+D + + +
Sbjct: 313 SGALQIGKCIHDQVVK-MELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTV 371
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
M+ +HG + ++ ++ C + T+V + A + +G KE KM
Sbjct: 372 MVAGY----GMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKM 427
Query: 346 KEAGVQKEPG 355
K EPG
Sbjct: 428 K-CEFDVEPG 436
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 146/316 (46%), Gaps = 50/316 (15%)
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W ++I R+G+ +AL F M++ ++ PN T C + +CS L L G+ IH
Sbjct: 54 WNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQAF 113
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
+ V ALI+MYS+CG ++ A ++F+E+ ER+V ++ S+I+G + R+ EAV
Sbjct: 114 VFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVF 173
Query: 204 MFREMI-----------NQGIRPTKVTFVGVLNACS-----------HGGLVDLGFE--- 238
+F+E + G+ V V++AC+ HG V GFE
Sbjct: 174 LFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCL 233
Query: 239 -IFQSMTRDYGI---------------EPQIEHYGCIVDLLSRVGRPEEAYDFITNM--- 279
+ ++ Y E + + ++ + ++ G EA+ ++M
Sbjct: 234 AVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKR 293
Query: 280 -KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADS---GTYVLLSNAYASSGKW 335
++ + + L ++L AC G LQ+G+ I +++ D+ GT ++ + Y G+
Sbjct: 294 GEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIV--DMYCKCGRV 351
Query: 336 KEAVQIRAKMKEAGVQ 351
+ A + ++K V+
Sbjct: 352 EMARKAFDRLKRKNVK 367
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/439 (42%), Positives = 293/439 (66%), Gaps = 5/439 (1%)
Query: 54 TVMINCYVEHGL--VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR-- 109
M++ Y + G +E A +VF ++ +D V W +MI +NG A A+ L+ +M
Sbjct: 91 NTMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVG 149
Query: 110 DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDK 169
++ N V + VL AC+ GA++ G+ IH+ + + ++ N VG ++++MYS+CG ++
Sbjct: 150 GGIKCNAVALSAVLLACAHAGAIQTGKHIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEM 209
Query: 170 ALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH 229
A + F ++KE+++ +++++I G MHGR EA+E+F EM G+RP +TF+ VL ACSH
Sbjct: 210 ASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSH 269
Query: 230 GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLG 289
GL+D G + +M +++GIE +EHYGC+VDLL R G +EAY I MK+ PD + G
Sbjct: 270 AGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWG 329
Query: 290 SLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
+LLSAC+IH ++L E KRL + +++SG YVLLSN YA +G WK+ +IR +K
Sbjct: 330 ALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEAGMWKDVERIRLLVKTRR 389
Query: 350 VQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIE 409
++K PG SS E+ +I+ F +GD HPQ +IY +++L + ++ GY P+T VLHD++
Sbjct: 390 IEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLD 449
Query: 410 DWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVR 469
+ EKE AL IHSE+LA+ + L+++ P + I ++KNLRVC+DCH+ +K I IT+R+II+R
Sbjct: 450 EEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITEREIIIR 509
Query: 470 DRNRFHHFENGTCSCGDYW 488
D RFHHF++G CSC DYW
Sbjct: 510 DLQRFHHFKDGLCSCRDYW 528
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 128/277 (46%), Gaps = 42/277 (15%)
Query: 68 NAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP--NEVTIVCVLSA 125
+A F + + V TAM G VRN + +L+LFR M + +E + SA
Sbjct: 2 DARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSA 61
Query: 126 CSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG--DIDKALQVFEEMKERDVT 183
+++ + +H+ + K + N V +++ Y++ G D++ A +VF+ M ERDV
Sbjct: 62 SARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVV 120
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMIN--QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
++NS+IA A +G S EA+ ++ +M+N GI+ V VL AC+H G + G I
Sbjct: 121 SWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHN 180
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPE------------------------------- 270
+ R G+E + IVD+ S+ GR E
Sbjct: 181 QVVR-MGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQ 239
Query: 271 EAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLG 304
EA + T MK + P++I S+L+AC G L G
Sbjct: 240 EALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEG 276
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 35/205 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ IH QV+++GL N +V++Y KCG + A + F ++ E N +++ + MI Y
Sbjct: 175 GKHIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKN-ILSWSAMITGYG 233
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG + A E+F+ EM+R +RPN +T +
Sbjct: 234 MHGRGQEALEIFT-------------------------------EMKRSGLRPNYITFIS 262
Query: 122 VLSACSQLGALELGR-WIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL+ACS G L+ GR W ++ + I+ G ++++ R G +D+A + +EMK +
Sbjct: 263 VLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVK 322
Query: 181 -DVTTYNSLIAGLAMHGRSIEAVEM 204
D + +L++ +H +++E EM
Sbjct: 323 PDAAIWGALLSACRIH-KNVELAEM 346
>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/489 (39%), Positives = 297/489 (60%), Gaps = 3/489 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H + + + + L+++Y KCG+ +A +FD + N V + T MI+ Y
Sbjct: 124 GKQVHARFMLSXFCDDEVVKSSLIDMYTKCGQPDEARAVFDSILFKNSV-SWTSMISGYA 182
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR-PNEVTIV 120
G A ++F + V++ WTA+I GL+++G + LF EM+R+ + + + +
Sbjct: 183 RSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLS 242
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+ C+ L LELG+ IH + + + AL++MY++C DI A +F M +
Sbjct: 243 SVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRK 302
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++ S+I G A HG++ EA+ ++ EM+ I+P +VTFVG+L ACSH GLV G E+F
Sbjct: 303 DVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELF 362
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+SMT DY I P ++HY C++DLLSR G +EA + + + PD SLLSAC H
Sbjct: 363 RSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNN 422
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
L++G +IA R+LD + D TY+LLSN YA + W ++R M V+KEPG SSI+
Sbjct: 423 LEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSID 482
Query: 361 VNNEIHEFILGD-IRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
+ F G+ HP + +I +++L ++ GY P+T VL+DIE EKE L
Sbjct: 483 FGKDSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFW 542
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSERLA+ YGL+ P T IR+VKNLR+C DCH+++K I++I KR+I+VRD R+HHF+
Sbjct: 543 HSERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKE 602
Query: 480 GTCSCGDYW 488
G CSC D+W
Sbjct: 603 GKCSCNDFW 611
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 119/537 (22%), Positives = 208/537 (38%), Gaps = 128/537 (23%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
E+H Q++K G + L+++YGKCG A+QLFDEMP
Sbjct: 24 ELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPN----------------- 66
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPNEVTIVCV 122
+D V W +++ + R L + M D ++P+ C+
Sbjct: 67 ---------------RDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACI 111
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
+ ACS LG L LG+ +H+ + +V +LI+MY++CG D+A VF+ + ++
Sbjct: 112 VRACSSLGYLRLGKQVHARFMLSXFCDDEVVKSSLIDMYTKCGQPDEARAVFDSILFKNS 171
Query: 183 TTYNSLIAGLAMHGRSIEAVE-------------------------------MFREMINQ 211
++ S+I+G A GR EA++ +F EM +
Sbjct: 172 VSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRRE 231
Query: 212 GIRPT-KVTFVGVLNACS-----------HGGLVDLGFE--------------------- 238
GI + V+ C+ HG ++ LGFE
Sbjct: 232 GIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILA 291
Query: 239 ---IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLL 292
IF M R + + I+ ++ G+ EEA YD + +I P+ + LL
Sbjct: 292 AKDIFYRMPRK-----DVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLL 346
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGT--YVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
AC G + G ++ + + S + Y L + + SG EA + K+
Sbjct: 347 YACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFK-- 404
Query: 351 QKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIED 410
EP +S+ + +RH E ++ +++ L+ PST ++L ++
Sbjct: 405 PDEPTWASL---------LSACMRHNNLEM---GVRIADRVLDLKPEDPSTYILLSNVYA 452
Query: 411 WEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCN---DC-HSMIKLIANITK 463
+ W +L + Y++I K+ +V + C H M I N+ K
Sbjct: 453 GAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHPMKNEICNLLK 509
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L C++ + +HS + K D + ++ L+++Y +CG I +ALQ+F+EM RD
Sbjct: 10 LQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDH 69
Query: 183 TTYNSLIAGLAMHGRSI---EAVEMFREMINQ-GIRPTKVTFVGVLNACSHGGLVDLGFE 238
++ S+ L H +++ + M M G++P F ++ ACS G + LG +
Sbjct: 70 VSWASI---LTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQ 126
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
+ + ++ ++D+ ++ G+P+EA
Sbjct: 127 VHARFMLSXFCDDEVVK-SSLIDMYTKCGQPDEA 159
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/487 (40%), Positives = 300/487 (61%), Gaps = 2/487 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ HG VL+ G S + L+++Y KC A ++FD M VV ++ Y+
Sbjct: 355 GKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN-KTVVTWNSIVAGYI 413
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ-RDNVRPNEVTIV 120
E+G V+ A+E F+ + K+ V W +I LV+ A+++F MQ ++ V + VT++
Sbjct: 414 ENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMM 473
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+ SAC LGAL+L +WI+ Y+ K+RI L+ +G L++M+SRCGD + A+ +F + R
Sbjct: 474 SIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR 533
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV+ + + I +AM G A+E+F EMI QG++P V F+G L AC HGGLV G EIF
Sbjct: 534 DVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIF 593
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM + +G+ P+ HYGC+VDLL R G EEA I +M P+ ++ SLL+AC++ G
Sbjct: 594 NSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVIWNSLLAACRVQGN 653
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+++ A+++ +G+YVLLSN YAS+G+W + ++R MKE G++K PG S I+
Sbjct: 654 VEMAAFAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSVIQ 713
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+ + HEF GD HP+ +I + EL Q G+ P VL D+++ EK + L+ H
Sbjct: 714 IRGKTHEFTSGDESHPEMRKIEAMLDELSQRASDLGHVPDLSNVLMDVDEQEKIFMLSRH 773
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LA+ +GLIS+ TTIR+VKNLRVC+ CHS K + + R+II+RD NRFH G
Sbjct: 774 SEKLAMAFGLISSNKGTTIRIVKNLRVCSYCHSFAKFASKVYNREIILRDNNRFHFIRQG 833
Query: 481 TCSCGDY 487
CSC D+
Sbjct: 834 KCSCSDF 840
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 117/211 (55%), Gaps = 12/211 (5%)
Query: 40 LFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMAR 99
L +M D+ +++ Y E G ++ A +VF + ++ V WT+MI G R
Sbjct: 158 LIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKD 217
Query: 100 ALDLFREMQRD-NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALI 158
A+DLF M RD +V PN VT+VCV+SAC++L LE G ++ ++ I++N ++ AL+
Sbjct: 218 AVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALV 277
Query: 159 NMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKV 218
+MY +C ID A ++F+E ++ N++ + G + EA+ + M++ GIRP ++
Sbjct: 278 DMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRI 337
Query: 219 TFVGVLNACS-----------HGGLVDLGFE 238
+ + +++CS HG ++ GFE
Sbjct: 338 SMLSAISSCSQLRNILWGKSCHGYVLRNGFE 368
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 103/482 (21%), Positives = 184/482 (38%), Gaps = 139/482 (28%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEF--------------------------- 34
G +IHG ++K+ + + LV Y +CGE
Sbjct: 152 GIQIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYAR 211
Query: 35 ----KDAMQLFDEMPECNDVVASTVMINC------------------------------- 59
KDA+ LF M DV+ ++V + C
Sbjct: 212 REFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDL 271
Query: 60 --------YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN 111
Y++ ++ A +F + AM VR G AL + M
Sbjct: 272 MISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSG 331
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
+RP+ ++++ +S+CSQL + G+ H Y+ ++ + + ALI+MY +C D A
Sbjct: 332 IRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAF 391
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHG--------------RSI-----------------E 200
++F+ M + V T+NS++AG +G ++I E
Sbjct: 392 RIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEE 451
Query: 201 AVEMFREMINQG-IRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI 259
A+E+F M +Q + VT + + +AC H G +DL I+ + ++ I+ + +
Sbjct: 452 AIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNR-IQLDVRLGTTL 510
Query: 260 VDLLSRVGRPEEA---YDFITNMKIA-------------------------------PDH 285
VD+ SR G PE A ++ +TN ++ PD
Sbjct: 511 VDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDG 570
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRL--LDCRSADSGTYVLLSNAYASSGKWKEAVQIRA 343
++ L+AC G +Q G++I + L S + Y + + +G +EA+Q+
Sbjct: 571 VVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIK 630
Query: 344 KM 345
M
Sbjct: 631 DM 632
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 145/315 (46%), Gaps = 49/315 (15%)
Query: 48 NDVVASTVMINCYVEHGLVEN---AFEVFSRVKVKDT-VCWTAMIDGLVRNGEMARALDL 103
+DV A T ++ E G E+ A EVF + T + ++I G +G A+ L
Sbjct: 61 DDVSAITKLVARSCELGTRESLSFAKEVFENGESYGTCFMYNSLIRGYASSGLCKEAILL 120
Query: 104 FREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSR 163
F M + P++ T LS C++ G IH + K + V +L++ Y+
Sbjct: 121 FIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAE 180
Query: 164 CGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI-NQGIRPTKVTFVG 222
CG++D A +VF+EM ER+V ++ S+I G A + +AV++F M+ ++ + P VT V
Sbjct: 181 CGELDCARKVFDEMSERNVVSWTSMICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVC 240
Query: 223 VLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIA 282
V++AC+ L + E+ YDFI + I
Sbjct: 241 VISACAK---------------------------------LEDLETGEKVYDFIRDSGIE 267
Query: 283 PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASS----GKWKEA 338
+ +M+ +L+ ++ K IAKRL D A + + L NA AS+ G KEA
Sbjct: 268 VNDLMISALVD---MYMKCN-AIDIAKRLFDEYGASN---LDLCNAMASNYVRQGLTKEA 320
Query: 339 VQIRAKMKEAGVQKE 353
+ + M ++G++ +
Sbjct: 321 LGVLNLMMDSGIRPD 335
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/488 (38%), Positives = 290/488 (59%), Gaps = 33/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR IH V+K+GL + L +Y KCG+ A LFD+M
Sbjct: 240 QGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKM---------------- 283
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
K + + W AMI G +NG A+D+F EM +VRP+ ++I
Sbjct: 284 ----------------KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+SAC+Q+G+LE R ++ Y+G+ + + ALI+M+++CG ++ A VF+ +R
Sbjct: 328 SAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR 387
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++++I G +HGR+ EA+ ++R M G+ P VTF+G+L AC+H G+V G+ F
Sbjct: 388 DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF 447
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
M D+ I PQ +HY C++DLL R G ++AY+ I M + P + G+LLSACK H
Sbjct: 448 NRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRH 506
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++LGE A++L +++G YV LSN YA++ W ++R +MKE G+ K+ GCS +E
Sbjct: 507 VELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVE 566
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
V + F +GD HP+ E+I ++++ ++ +K G+ + + LHD+ D E E L H
Sbjct: 567 VRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSH 626
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SER+AI YGLIST T +R+ KNLR C +CH+ KLI+ + R+I+VRD NRFHHF++G
Sbjct: 627 SERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDG 686
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 687 VCSCGDYW 694
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 156/300 (52%), Gaps = 34/300 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H QV +LG ++ + L+ LY KC A +F+ +P
Sbjct: 138 GRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLP---------------- 181
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ + V WTA++ +NGE AL++F +M++ +V+P+ V +V
Sbjct: 182 --------------LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVS 227
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL+A + L L+ GR IH+ + K +++ + +L MY++CG + A +F++MK +
Sbjct: 228 VLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPN 287
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ +N++I+G A +G + EA++MF EMIN+ +RP ++ ++AC+ G ++ +++
Sbjct: 288 LILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYE 347
Query: 242 SMTR-DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ R DY + I ++D+ ++ G E A + + + D ++ +++ +HG+
Sbjct: 348 YVGRSDYRDDVFIS--SALIDMFAKCGSVEGA-RLVFDRTLDRDVVVWSAMIVGYGLHGR 404
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 145/335 (43%), Gaps = 67/335 (20%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
++IH ++L LGL+ + KL+ G+ A Q+FD++P
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRP--------------- 82
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
++F W A+I G RN AL ++ MQ V P+ T +
Sbjct: 83 --------QIFP---------WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHL 125
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE--EMKER 180
L ACS L L++GR++H+ + + D + V LI +Y++C + A VFE + ER
Sbjct: 126 LKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPER 185
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------H 229
+ ++ ++++ A +G +EA+E+F +M ++P V V VLNA + H
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 230 GGLVDLGFEI----FQSMTRDYG---------------IEPQIEHYGCIVDLLSRVGRPE 270
+V +G EI S+ Y P + + ++ ++ G
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 271 EAYDF---ITNMKIAPDHIMLGSLLSACKIHGKLQ 302
EA D + N + PD I + S +SAC G L+
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLE 340
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/488 (41%), Positives = 288/488 (59%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
E R +H ++++GL SN S L+ Y KC A Q+F+E+
Sbjct: 238 EVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELG--------------- 282
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
K + W AMI G +N A LF MQ +NVRP+ T+V
Sbjct: 283 ----------------NKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLV 326
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+ A + + RWIH Y +H++D + V ALI+MYS+CG + A ++F+ ++R
Sbjct: 327 SVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDR 386
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
V T+N++I G HG AVE+F EM G P + TF+ VL ACSH GLVD G + F
Sbjct: 387 HVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYF 446
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM +DYG+EP +EHYG +VDLL R G+ +EA+ FI NM I P + G++L ACK+H
Sbjct: 447 ASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKN 506
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++L E+ A+ + + + +VLL+N YA++ WK+ ++R M++ G+QK PG S I+
Sbjct: 507 VELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKGLQKTPGWSIIQ 566
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+ NE+H F G H + IY ++ +L + +K GY P T+ + HD+ED K L H
Sbjct: 567 LKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIKDMGYVPDTDSI-HDVEDDVKAQLLNTH 625
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI YGLI T P TTI++ KNLRVCNDCH+ KLI+ +T R+II+RD RFHHF++G
Sbjct: 626 SEKLAIAYGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLLTGREIIMRDIQRFHHFKDG 685
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 686 KCSCGDYW 693
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 151/314 (48%), Gaps = 19/314 (6%)
Query: 47 CNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
++ +AST + N Y + +A VF R+ +D V W A++ G RNG + A++
Sbjct: 48 ASESIASTALANMYFKCRRPADARRVFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVR 107
Query: 107 MQRD--NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC 164
MQ + RP+ VT+V VL AC+ AL R +H++ + +D V A+++ Y +C
Sbjct: 108 MQGEEGGERPDSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKC 167
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL 224
G ++ A VF+ M R+ ++N++I G A +G + EA+ +F M+ +G+ T + + L
Sbjct: 168 GAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAAL 227
Query: 225 NACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM----- 279
AC G +D + + + R G+ + ++ ++ R + A +
Sbjct: 228 QACGELGYLDEVRRVHELLVR-VGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKT 286
Query: 280 KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL-LDCRSADSGTYVLLSNAYAS-----SG 333
+I+ + ++LG + C + E++ R+ L+ DS T V + A A
Sbjct: 287 RISWNAMILGFTQNECP-----EDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQA 341
Query: 334 KWKEAVQIRAKMKE 347
+W IR ++ +
Sbjct: 342 RWIHGYSIRHQLDQ 355
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 120/264 (45%), Gaps = 32/264 (12%)
Query: 32 GEFKDAMQLFDEMPECNDVVA----------------------STVMINCYVEHGLVENA 69
GE D++ L +P C D A ST +++ Y + G VE A
Sbjct: 114 GERPDSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAA 173
Query: 70 FEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQL 129
VF + V+++V W AMIDG NG A+ LF M ++ V + +++ L AC +L
Sbjct: 174 RAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGEL 233
Query: 130 GALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV-TTYNSL 188
G L+ R +H + + + N V ALI Y++C D A QVF E+ + ++N++
Sbjct: 234 GYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAM 293
Query: 189 IAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYG 248
I G + +A +F M + +RP T V V+ A + D+ + Y
Sbjct: 294 ILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPA-----VADISDPLQARWIHGYS 348
Query: 249 IEPQIEH----YGCIVDLLSRVGR 268
I Q++ ++D+ S+ GR
Sbjct: 349 IRHQLDQDVYVLTALIDMYSKCGR 372
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 3/166 (1%)
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T +L C+ L GR +H+ + + I AL NMY +C A +VF+ M
Sbjct: 18 TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ--GIRPTKVTFVGVLNACSHGGLVDL 235
RD +N+++AG A +G A+E M + G RP VT V VL AC+ +
Sbjct: 78 PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHA 137
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKI 281
E+ R G++ + ++D + G E A M +
Sbjct: 138 CREVHAFALR-AGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPV 182
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/492 (40%), Positives = 300/492 (60%), Gaps = 4/492 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEF---KDAMQLFDEMPECNDVVASTVMI 57
E + G++ + G+++N T + ++ +Y K +L E DVV +T ++
Sbjct: 291 EAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALM 350
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y A+++F + KD + WT M +NG AL LF+EMQ + RP
Sbjct: 351 SLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSA 410
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T+V VL C+ L AL+ GR IHS++ ++ + +V ALINMY +CG + +A VFE+M
Sbjct: 411 TLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKM 470
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
+RD+ +NS++ A HG E +++F +M G + V+FV VL+A SH G V G+
Sbjct: 471 AKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGY 530
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK-IAPDHIMLGSLLSACK 296
+ F +M +D+ I P E YGC+VDLL R GR +EA D + + PD I+ +LL AC+
Sbjct: 531 QYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACR 590
Query: 297 IHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGC 356
H K + A+++L+ + SG YV+LSN YA++G W ++R M+ GV+KEPG
Sbjct: 591 THNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGR 650
Query: 357 SSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWA 416
SSIE+ N +HEF+ GD HP+R IY ++ L ++ GY P T+++LHD+ED KE
Sbjct: 651 SSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDM 710
Query: 417 LAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHH 476
L HSERLAI +GL+ST P T +RV+KNLRVC+DCH+ K I+ + R+I+VRD +RFH+
Sbjct: 711 LFYHSERLAIAFGLMSTPPGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHN 770
Query: 477 FENGTCSCGDYW 488
F++G CSC DYW
Sbjct: 771 FKDGRCSCKDYW 782
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 169/355 (47%), Gaps = 16/355 (4%)
Query: 13 GLRSNRSTRLKLVELYGK---CGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENA 69
G+ N+ T + YG E K L +DV +N + GL+ +A
Sbjct: 202 GVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDA 261
Query: 70 FEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQL 129
+F + +D V W +I V+N A+ LF +Q+D ++ N++T V +L+ + L
Sbjct: 262 RRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSL 321
Query: 130 GALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLI 189
+L G+ IH + + D + +V AL+++Y RC +A ++F +M +DV T+ +
Sbjct: 322 TSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMC 381
Query: 190 AGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGI 249
A +G EA+++F+EM +G RPT T V VL+ C+H + G +I + + G
Sbjct: 382 VAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIEN-GF 440
Query: 250 EPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG----KLQLGE 305
++ ++++ + G+ EA M D ++ S+L A HG LQL
Sbjct: 441 RMEMVVETALINMYGKCGKMAEARSVFEKMA-KRDILVWNSMLGAYAQHGYYDETLQLFN 499
Query: 306 QIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQ-IRAKMKEAGVQKEP---GC 356
Q+ LD AD+ ++V + +A + SG + Q A +++ + P GC
Sbjct: 500 QMQ---LDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGC 551
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 156/361 (43%), Gaps = 51/361 (14%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H V G N L+++Y +CG +A Q+
Sbjct: 24 GRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV--------------------- 62
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
FE+ R KD WT MI + G+ RAL +F +MQ ++V P +VT V
Sbjct: 63 --------FEILER---KDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVA 111
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+AC+ +L+ G IH + + + + VG ALINMY++CG + A F+ ++ RD
Sbjct: 112 ILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRD 171
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ ++IA H + A ++R M G+ P K+T V NA + G I+
Sbjct: 172 VVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIY- 230
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---------YDFITNMKIAPDHIMLGSLL 292
S+ +E + +++ G +A D +T + ++ +
Sbjct: 231 SLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFG 290
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
A ++ G+LQ D A+ T+VL+ N Y S + I +KEAG +
Sbjct: 291 EAVRLFGRLQ---------QDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDR 341
Query: 353 E 353
+
Sbjct: 342 D 342
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 168/346 (48%), Gaps = 44/346 (12%)
Query: 20 TRLKLVELYGKCGE---FKDAMQLFDEMPECN---DVVASTVMINCYVEHGLVENAFEVF 73
T++ V + C KD M++ ++ + DV T +IN Y + G V A++ F
Sbjct: 105 TKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSF 164
Query: 74 SRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALE 133
R++ +D V WTAMI V++ + A A L+R MQ D V PN++T+ V +A L
Sbjct: 165 KRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLS 224
Query: 134 LGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLA 193
G++I+S + ++ + V + +NM+ G + A ++FE+M +RDV T+N +I
Sbjct: 225 EGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYV 284
Query: 194 MHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQI 253
+ EAV +F + GI+ +TFV +LN ++ S+T +
Sbjct: 285 QNENFGEAVRLFGRLQQDGIKANDITFVLMLN-------------VYTSLT-------SL 324
Query: 254 EHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
I +L+ G YD D ++ +L+S ++G+ + Q K +D
Sbjct: 325 AKGKVIHELVKEAG-----YD--------RDVVVATALMS---LYGRCEAPGQAWKIFVD 368
Query: 314 CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
S D T+ ++ AYA +G KEA+Q+ +M+ G + P +++
Sbjct: 369 MGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEG--RRPTSATL 412
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 127/263 (48%), Gaps = 3/263 (1%)
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
+P+ V +L CS ++ GR +H ++ + N++V G LI MY++CG + +A Q
Sbjct: 2 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
VFE ++ +DV + +I G A+ MF +M + + PTKVT+V +LNAC+
Sbjct: 62 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 121
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
+ G EI + + G E + ++++ ++ G A+D ++ D + +++
Sbjct: 122 LKDGMEIHGQILQQ-GFEGDVFVGTALINMYNKCGSVRGAWDSFKRLE-HRDVVSWTAMI 179
Query: 293 SACKIHGKLQLGEQIAKRL-LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
+AC H + L + +R+ LD + T + NAY E I + + ++
Sbjct: 180 AACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVME 239
Query: 352 KEPGCSSIEVNNEIHEFILGDIR 374
+ + +N + +LGD R
Sbjct: 240 SDVRVMNSAMNMFGNAGLLGDAR 262
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/440 (42%), Positives = 284/440 (64%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D++ +++ Y + G++++A F + KD+V ++A++ G V+NG A AL +FR MQ
Sbjct: 346 DILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQ 405
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ P+ T++ VL ACS L AL+ G H Y+ + ++ ALI+MYS+CG I
Sbjct: 406 LSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKIS 465
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +VF M D+ ++N++I G +HG +EA+ +F +++ G++P +TF+ +L++CS
Sbjct: 466 FAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCS 525
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLV G F +M+RD+ I P++EH C+VD+L R G +EA+ FI NM PD +
Sbjct: 526 HSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIW 585
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+LLSAC+IH ++LGE+++K++ +G +VLLSN Y+++G+W +A IR K+
Sbjct: 586 SALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDW 645
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
G++K PGCS IE+N +H F+ GD H Q QI +K++EL +K GY V D+
Sbjct: 646 GLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDV 705
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
E+ EKE L HSE+LAI +G+++ K I V KNLRVC DCH+ IK + ITKR+I V
Sbjct: 706 EEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKREITV 765
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD NRFHHF+NGTC+CGD+W
Sbjct: 766 RDANRFHHFKNGTCNCGDFW 785
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 138/254 (54%), Gaps = 5/254 (1%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
N VV T +++ Y + + A ++F + V++ V W+AMI G V + M AL+LF +M
Sbjct: 243 NGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQM 302
Query: 108 -QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
+D + P VT+ VL AC++L L GR +H Y+ K L+ ++G L++MY++CG
Sbjct: 303 ILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGV 362
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
ID A++ F+EM +D +++++++G +G + A+ +FR M GI P T +GVL A
Sbjct: 363 IDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPA 422
Query: 227 CSHGGLVDLGFEIFQSM-TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDH 285
CSH + GF + R + + I ++D+ S+ G+ A + M D
Sbjct: 423 CSHLAALQHGFCSHGYLIVRGFATDTLI--CNALIDMYSKCGKISFAREVFNRMD-RHDI 479
Query: 286 IMLGSLLSACKIHG 299
+ +++ IHG
Sbjct: 480 VSWNAMIIGYGIHG 493
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 106/224 (47%), Gaps = 32/224 (14%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
E ++IH LK ++ S KL LY C + A +LFDE+P
Sbjct: 26 EAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN-------------- 71
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ W +I NG A+DL+ M VRPN+ T
Sbjct: 72 ------------------PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYP 113
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL ACS L A+E G IHS+ ++ + V AL++ Y++CG + +A ++F M R
Sbjct: 114 FVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR 173
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL 224
DV +N++IAG +++G +AV++ +M +GI P T VGVL
Sbjct: 174 DVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVL 217
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 151/321 (47%), Gaps = 24/321 (7%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPEC---NDVVASTVMINCY 60
+++ +L LG+R N+ T +++ +D +++ +DV T +++ Y
Sbjct: 95 DLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFY 154
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ G++ A +FS + +D V W AMI G G A+ L +MQ + + PN TIV
Sbjct: 155 AKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIV 214
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL + AL G+ +H Y + D +VG L++MY++C + A ++F+ M R
Sbjct: 215 GVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVR 274
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMI-NQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+ +++++I G EA+E+F +MI + PT VT VL AC+ L DL
Sbjct: 275 NEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAK--LTDL---- 328
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLL---------SRVGRPEEAYDFITNMKIAPDHIMLGS 290
+R + I G ++D+L ++ G ++A F M D + +
Sbjct: 329 ----SRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMN-PKDSVSFSA 383
Query: 291 LLSACKIHGKLQLGEQIAKRL 311
++S C +G + I + +
Sbjct: 384 IVSGCVQNGNAAVALSIFRMM 404
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 2/178 (1%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L AC Q +L + IH + K+ + + V L +Y C + A ++F+E+
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +N +I A +G A++++ M++ G+RP K T+ VL ACS ++ G EI
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI-H 132
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
S + +G+E + +VD ++ G EA ++M D + ++++ C ++G
Sbjct: 133 SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMS-HRDVVAWNAMIAGCSLYG 189
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 113/250 (45%), Gaps = 42/250 (16%)
Query: 6 HGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGL 65
HG ++ G ++ L+++Y KCG+ A ++F+ M +D+V+ MI Y HGL
Sbjct: 436 HGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDR-HDIVSWNAMIIGYGIHGL 494
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
G+ AL LF ++ ++P+++T +C+LS+
Sbjct: 495 ------------------------GM-------EALGLFHDLLALGLKPDDITFICLLSS 523
Query: 126 CSQLGALELGR-WIHSYMGKHRI--DLNHIVGGALINMYSRCGDIDKALQVFEEMK-ERD 181
CS G + GR W + I + H + ++++ R G ID+A M E D
Sbjct: 524 CSHSGLVMEGRLWFDAMSRDFSIVPRMEHCI--CMVDILGRAGLIDEAHHFIRNMPFEPD 581
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKV-TFVGVLNACSHGGLVDLGFEIF 240
V +++L++ +H ++IE E + I Q + P FV + N S G D I
Sbjct: 582 VRIWSALLSACRIH-KNIELGEEVSKKI-QSLGPESTGNFVLLSNIYSAAGRWDDAAHI- 638
Query: 241 QSMTRDYGIE 250
+ +D+G++
Sbjct: 639 RITQKDWGLK 648
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/492 (39%), Positives = 292/492 (59%), Gaps = 5/492 (1%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
GR IHG ++ G+ N LV LY +C K A +FD MP DVV+ ++ Y
Sbjct: 251 SGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPH-RDVVSWNGVLTAY 309
Query: 61 VEHGLVENAFEVFSRVKVK----DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
+ + +FS++ K D W A+I G + NG+ +A+++ R+MQ +PN+
Sbjct: 310 FTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQ 369
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
+TI L ACS L +L +G+ +H Y+ +H + + AL+ MY++CGD++ + VF+
Sbjct: 370 ITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDM 429
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
+ +DV +N++I AMHG E + +F M+ GI+P VTF GVL+ CSH LV+ G
Sbjct: 430 ICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEG 489
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
+IF SM RD+ +EP HY C+VD+ SR GR EAY+FI M + P G+LL AC+
Sbjct: 490 LQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACR 549
Query: 297 IHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGC 356
++ ++L + A +L + + G YV L N ++ W EA + R MKE G+ K PGC
Sbjct: 550 VYKNVELAKISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGC 609
Query: 357 SSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWA 416
S ++V + +H F++GD + + ++IY + EL + +K GY P T+ VL DI+ EK +
Sbjct: 610 SWLQVGDRVHTFVVGDKNNMESDKIYNFLDELGEKMKSAGYKPDTDYVLQDIDQEEKAES 669
Query: 417 LAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHH 476
L HSE+LA+ +G+++ ++IRV KNLR+C DCH+ IK ++ + IIVRD RFHH
Sbjct: 670 LCSHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYVSKVVGVTIIVRDSLRFHH 729
Query: 477 FENGTCSCGDYW 488
F NG CSC D W
Sbjct: 730 FRNGNCSCQDLW 741
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 140/310 (45%), Gaps = 36/310 (11%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPEC---NDVVASTVMI 57
E ++ + G++ + S L + + G G+ ++ D+ C +D +I
Sbjct: 115 EAIRLYASLRARGIKPHNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALI 174
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y + VE A VF + VKD V WT+M V G L +F EM + V+PN V
Sbjct: 175 HAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSV 234
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T+ +L ACS+L L+ GR IH + +H + N V AL+++Y+RC + +A VF+ M
Sbjct: 235 TLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLM 294
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
RDV ++N ++ + + + +F +M ++G+ + T+ V+ C G +
Sbjct: 295 PHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAV 354
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
E+ + M N+ P+ I + S L AC I
Sbjct: 355 EMLRKM---------------------------------QNLGFKPNQITISSFLPACSI 381
Query: 298 HGKLQLGEQI 307
L++G+++
Sbjct: 382 LESLRMGKEV 391
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/363 (20%), Positives = 155/363 (42%), Gaps = 50/363 (13%)
Query: 22 LKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDT 81
L+L++ G+F+ A QLFD +P+ + ST +I+ + GL A +++ ++ +
Sbjct: 70 LRLLKAALNVGDFRRAQQLFDNIPQPDPTTCST-LISAFTTRGLPNEAIRLYASLRAR-- 126
Query: 82 VCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSY 141
++P+ + V AC G + +H
Sbjct: 127 -----------------------------GIKPHNSVFLTVAKACGASGDASRVKEVHDD 157
Query: 142 MGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEA 201
+ + + +G ALI+ Y +C ++ A +VF+++ +DV ++ S+ + G
Sbjct: 158 AIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLG 217
Query: 202 VEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVD 261
+ +F EM G++P VT +L ACS + G I R +G+ + +V
Sbjct: 218 LAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVR-HGMIENVFVCSALVS 276
Query: 262 LLSR---VGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSAD 318
L +R V + +D + + + + +L + + + L L Q++ + ++ AD
Sbjct: 277 LYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVE---AD 333
Query: 319 SGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE--------PGCS---SIEVNNEIHE 367
T+ + +G+ ++AV++ KM+ G + P CS S+ + E+H
Sbjct: 334 EATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHC 393
Query: 368 FIL 370
++
Sbjct: 394 YVF 396
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 90/241 (37%), Gaps = 50/241 (20%)
Query: 153 VGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG 212
+G L+ GD +A Q+F+ + + D TT ++LI+ G EA+ ++ + +G
Sbjct: 68 LGLRLLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARG 127
Query: 213 IRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
I+P F+ V AC G R +E
Sbjct: 128 IKPHNSVFLTVAKACGASG---------------------------------DASRVKEV 154
Query: 273 YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASS 332
+D + D + +L+ A +GK + E + D D ++ +S+ Y +
Sbjct: 155 HDDAIRCGMMSDAFLGNALIHA---YGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVNC 211
Query: 333 GKWKEAVQIRAKMKEAGVQKE--------PGCS---SIEVNNEIHEFILGDIRHPQREQI 381
G + + + +M GV+ P CS ++ IH F +RH E +
Sbjct: 212 GLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFA---VRHGMIENV 268
Query: 382 Y 382
+
Sbjct: 269 F 269
>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 643
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/519 (40%), Positives = 311/519 (59%), Gaps = 32/519 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINC-- 59
G ++H Q LK GL S+ L+ +YG CG + A ++FDEM + N V + V+ C
Sbjct: 125 GFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFR 184
Query: 60 ----------------------------YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGL 91
Y++ G +E+A +FS + +D V W+ MI G+
Sbjct: 185 GNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGI 244
Query: 92 VRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH 151
NG + FRE+QR + PNEV++ VLSACSQ G+ E G+ +H ++ K
Sbjct: 245 AHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIV 304
Query: 152 IVGGALINMYSRCGDIDKALQVFEEMKE-RDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
V ALI+MYSRCG++ A VFE M+E R + ++ S+IAGLAMHG+ EAV +F EM
Sbjct: 305 SVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTA 364
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
G+ P ++F+ +L+ACSH GL++ G + F M R Y IEP+IEHYGC+VDL R G+ +
Sbjct: 365 YGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQ 424
Query: 271 EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYA 330
+AYDFI M I P I+ +LL AC HG ++L EQ+ +RL + +SG VLLSNAYA
Sbjct: 425 KAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYA 484
Query: 331 SSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQ 390
++GKWK+ IR M ++K S +EV +++F G+ + + ++K++E+
Sbjct: 485 TAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIIL 544
Query: 391 IVKLE-GYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCN 449
+K E GY+P L+D+E+ EKE ++ HSE+LA+ + L IR+VKNLR+C
Sbjct: 545 RLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICR 604
Query: 450 DCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
DCH+++KL + + +I+VRDRNRFH F++G+CSC DYW
Sbjct: 605 DCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 102/230 (44%), Gaps = 13/230 (5%)
Query: 80 DTVCWTAMIDGLVRNGEMARALDLFREMQRDN-VRPNEVTIVCVLSACSQLGALELGRWI 138
D + ++ G + E ++ +F EM R V P+ + V+ A +L G +
Sbjct: 69 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 128
Query: 139 HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRS 198
H KH ++ + VG LI MY CG ++ A +VF+EM + ++ +N++I
Sbjct: 129 HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDV 188
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGC 258
A E+F +M+ + V G + A G ++ IF M + +
Sbjct: 189 AGAREIFDKMLVRNHTSWNVMLAGYIKA----GELESAKRIFSEMPHRDDVS-----WST 239
Query: 259 IVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGE 305
++ ++ G E++ + ++ ++P+ + L +LSAC G + G+
Sbjct: 240 MIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGK 289
>gi|357125571|ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 600
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/488 (41%), Positives = 299/488 (61%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+++H Q GL + + L+ LY +C E A +FD
Sbjct: 145 EGQQLHAQAFGHGLEPSPYVQTGLLNLYARCEEVALARNVFD------------------ 186
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G+VE+ K+ V W++MI G R G + AL LFR+MQ V P+EVT+V
Sbjct: 187 ---GMVED----------KNLVAWSSMIGGYSRMGMVNEALGLFRDMQAVGVNPDEVTMV 233
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+SAC++ GAL+LG+W+H+++ + I ++ + ALI+MY++CG I++A VF+ M ER
Sbjct: 234 SVISACAKAGALDLGKWVHAFIDRKGITVDLELSTALIDMYAKCGLIERAKSVFDSMVER 293
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++++I GLAMHG + +A+ +F M+ +RP VTFVGVL+AC+H GLVD G +
Sbjct: 294 DTKAWSAMIVGLAMHGLAEDALGLFSRMLQLKVRPNNVTFVGVLSACAHSGLVDDGRRYW 353
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+M ++ GIE +E+YGC+VDLL R G +EA+ F+T M I+P+ ++ +LL A K +
Sbjct: 354 CTM-QELGIEASMENYGCMVDLLCRSGLLDEAFSFVTGMPISPNSVIWRNLLVASKSSNR 412
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+ + E ++RL + + YVLLSN YA + +W +R KMK+ V GCSSIE
Sbjct: 413 IDIVELASRRLFELEPQNPENYVLLSNLYALNSQWDRVRYMRKKMKDNNVTVVAGCSSIE 472
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+N +H+F++ D HP+ ++I ++E+ V G+ P T VLHD+ + EKE AL H
Sbjct: 473 INGYLHKFVVSDGSHPEIKKIRLVLREIADRVLCAGHKPWTAAVLHDVVEEEKEVALCEH 532
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLAI YGL+ TK IRVVKNLR C DCH + K+I+ R+IIVRDR RFH F G
Sbjct: 533 SERLAIAYGLLKTKAPHVIRVVKNLRFCPDCHEVTKIISKSYGREIIVRDRVRFHRFIGG 592
Query: 481 TCSCGDYW 488
+CSC D+W
Sbjct: 593 SCSCNDFW 600
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 130/252 (51%), Gaps = 8/252 (3%)
Query: 103 LFREM-QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMY 161
L+R M + PN T+ VL AC+ LG G+ +H+ H ++ + V L+N+Y
Sbjct: 116 LYRRMLHAGSPAPNSFTLAFVLKACTALGE---GQQLHAQAFGHGLEPSPYVQTGLLNLY 172
Query: 162 SRCGDIDKALQVFEEMKE-RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTF 220
+RC ++ A VF+ M E +++ ++S+I G + G EA+ +FR+M G+ P +VT
Sbjct: 173 ARCEEVALARNVFDGMVEDKNLVAWSSMIGGYSRMGMVNEALGLFRDMQAVGVNPDEVTM 232
Query: 221 VGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
V V++AC+ G +DLG + + R GI +E ++D+ ++ G E A +M
Sbjct: 233 VSVISACAKAGALDLGKWVHAFIDRK-GITVDLELSTALIDMYAKCGLIERAKSVFDSM- 290
Query: 281 IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNAYASSGKWKEAV 339
+ D +++ +HG + + R+L + ++ T+V + +A A SG +
Sbjct: 291 VERDTKAWSAMIVGLAMHGLAEDALGLFSRMLQLKVRPNNVTFVGVLSACAHSGLVDDGR 350
Query: 340 QIRAKMKEAGVQ 351
+ M+E G++
Sbjct: 351 RYWCTMQELGIE 362
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 71/179 (39%), Gaps = 45/179 (25%)
Query: 170 ALQVFEEMKERDVTTYNSLIAGL-----AMHGRSIEAVEMFREMINQG-IRPTKVTFVGV 223
A +F+++ E YNSLI + + + + + ++R M++ G P T V
Sbjct: 77 ARALFDQIPEPTAFCYNSLIRAVSGSGSSSNSGTTDTFLLYRRMLHAGSPAPNSFTLAFV 136
Query: 224 LNACS--------------HG---------GL---------VDLGFEIFQSMTRDYGIEP 251
L AC+ HG GL V L +F M D
Sbjct: 137 LKACTALGEGQQLHAQAFGHGLEPSPYVQTGLLNLYARCEEVALARNVFDGMVED----K 192
Query: 252 QIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQI 307
+ + ++ SR+G EA +M+ + PD + + S++SAC G L LG+ +
Sbjct: 193 NLVAWSSMIGGYSRMGMVNEALGLFRDMQAVGVNPDEVTMVSVISACAKAGALDLGKWV 251
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/515 (38%), Positives = 296/515 (57%), Gaps = 39/515 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+IH +LGL N + +Y +CG DA Q+F+EM + DVV+ MI+ +
Sbjct: 141 GRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEM-QYRDVVSWNAMISGFA 199
Query: 62 EHGLVENAFEVF-------------------------SRV-------------KVKDTVC 83
GL A +VF +RV + K +
Sbjct: 200 HAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGKARVEDIALLKGVFDEMRFKGLIS 259
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W AM+ N A++LF MQ+D + P+ VT+ VL +C ++ AL LG+ IH +
Sbjct: 260 WNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIK 319
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
+ R+ + ++ AL++MY+ CG + +A VF+ M RDV ++ S+I+ HG EA++
Sbjct: 320 RRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAID 379
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
+F +M QG+ P + FV +L ACSH GL+D+G F SMT ++ I P++EHY C+VDLL
Sbjct: 380 LFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLL 439
Query: 264 SRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV 323
R G EAYDFI M I P+ + G+LL AC+IH + +G A LL +G YV
Sbjct: 440 GRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYV 499
Query: 324 LLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYK 383
LLSN YA +G+W + +R+ M+ G++K PG S+ E+ + +H F +GD HPQ + IYK
Sbjct: 500 LLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSKMIYK 559
Query: 384 KMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVK 443
K+ EL + ++ GY+P E LHD+E+ +KE L++HSE+LAI + LI+T P T IR+
Sbjct: 560 KLSELLRRIREMGYNPEVEATLHDVEEEDKEGHLSVHSEKLAIAFLLINTNPGTPIRITM 619
Query: 444 NLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFE 478
NLR C+DCH KLI+ I R+II++D NR H+ +
Sbjct: 620 NLRTCSDCHHAAKLISTIAGREIILKDVNRIHYMK 654
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 131/279 (46%), Gaps = 20/279 (7%)
Query: 79 KDTVCWTAMIDGLVRNGEMARALDLFREM--QRDNVRPNEVTIVCVLSACSQLGALELGR 136
+ TV + ++ GL AL LF M Q P+ T L +C+ L LGR
Sbjct: 83 RTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAATDGLVLGR 142
Query: 137 WIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHG 196
IHS + +D N V + I+MY+RCG D A Q+FEEM+ RDV ++N++I+G A G
Sbjct: 143 QIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAHAG 202
Query: 197 RSIEAVEMFREMIN-QGIRPTKVTFVGVLNACSHGGLVDLGF--EIFQSMTRDYGIEPQI 253
A+++FRE++ Q +P T +L + + D+ +F M I
Sbjct: 203 LFGRAMDVFRELVALQCPKPDAGTMASILPSMGKARVEDIALLKGVFDEMRFKGLIS--- 259
Query: 254 EHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKR 310
+ ++ + + EA + M+ I PD + L ++L +C L LG++I +
Sbjct: 260 --WNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEV 317
Query: 311 LLDCRSADSGTYVLLSNA----YASSGKWKEAVQIRAKM 345
+ R S +LL NA YA+ G KEA + M
Sbjct: 318 IKRRRMCSS---MLLENALMDMYANCGCLKEARDVFDSM 353
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/489 (40%), Positives = 292/489 (59%), Gaps = 34/489 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G++IHG K G + N LV++Y +CGE +++ +FDE+
Sbjct: 213 DGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDEL---------------- 256
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ K+ V W A+I G R GE AL LF +MQR+ E T
Sbjct: 257 ----------------ESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYS 300
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L + S G+LE G+W+H++M K L VG L++MY++ G+I A +VF+ + +
Sbjct: 301 ALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKV 360
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQ-GIRPTKVTFVGVLNACSHGGLVDLGFEI 239
DV + NS++ G A HG EAVE+F EM+ I P +TF+ VL ACSH GL+D G
Sbjct: 361 DVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYY 420
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F+ M + YG+EP++ HY +VDL R G ++A FI M I P+ + G+LL A K+H
Sbjct: 421 FELM-KKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHK 479
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
++G A+++L+ G + LLSN YAS+G+WK+ ++R +MK++G++KEP CS +
Sbjct: 480 NTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWV 539
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E+ N +H F DI HPQ+ ++Y+ + L Q +K GY P T V ++ EKE L
Sbjct: 540 EIENSVHIFSANDISHPQKNKVYEMWENLNQKIKEIGYVPDTSHVHVFVDQQEKELNLQY 599
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LA+ + L++TKP + IR++KN+RVC DCHS IK ++ + KR+IIVRD NRFHHF +
Sbjct: 600 HSEKLALAFALLNTKPGSVIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFRD 659
Query: 480 GTCSCGDYW 488
G+CSC DYW
Sbjct: 660 GSCSCRDYW 668
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 184/409 (44%), Gaps = 58/409 (14%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNG---EMARALDLF 104
ND+V ++ Y + G +E A +VF + VKD V WT+MI G ++G AL LF
Sbjct: 124 NDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLF 183
Query: 105 REMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC 164
EM RD +RPNE + ++ C LG+ G+ IH K+ N VG +L++MY+RC
Sbjct: 184 LEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARC 243
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL 224
G++ ++ VF+E++ ++ ++N+LI+G A G EA+ +F +M +G T+ T+ +L
Sbjct: 244 GELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALL 303
Query: 225 NACSHGGLVDLGFEIFQSMTRD---------------YGIEPQIEHYGCIVDLLSRV--- 266
+ S G ++ G + M + Y I + D L +V
Sbjct: 304 CSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVV 363
Query: 267 ------------GRPEEAYDFITNM----KIAPDHIMLGSLLSACKIHGKLQLG----EQ 306
G +EA + M +I P+ I S+L+AC G L G E
Sbjct: 364 SCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFEL 423
Query: 307 IAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIH 366
+ K L+ + + Y + + + +G +A +M IE N I
Sbjct: 424 MKKYGLEPKLSH---YTTVVDLFGRAGLLDQAKSFIEEM------------PIEPNATIW 468
Query: 367 EFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
+LG + + ++ +++++L+ + P +L +I +W
Sbjct: 469 GALLGASKMHKNTEM--GAYAAQKVLELDPFYPGAHTLLSNIYASAGQW 515
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 123/261 (47%), Gaps = 8/261 (3%)
Query: 94 NGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIV 153
N L + + ++ P+ +L C+ LG L+ G+ +H+++ + + ++
Sbjct: 69 NPNSTTGLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVI 128
Query: 154 GGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHG---RSIEAVEMFREMIN 210
+++ MY++CG ++ A QVF+EM +DV T+ S+I G + G + A+ +F EM+
Sbjct: 129 KNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVR 188
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
G+RP + ++ C G G +I YG + + +VD+ +R G
Sbjct: 189 DGLRPNEFALSSLVKCCGFLGSCVDGKQI-HGCCWKYGFQENVFVGSSLVDMYARCGELR 247
Query: 271 EAYDFITNMKIAPDHIMLGSLLS--ACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNA 328
E+ ++ + + + +L+S A K G+ LG K + A TY L +
Sbjct: 248 ESRLVFDELE-SKNEVSWNALISGFARKGEGEEALG-LFVKMQREGFGATEFTYSALLCS 305
Query: 329 YASSGKWKEAVQIRAKMKEAG 349
+++G ++ + A M ++G
Sbjct: 306 SSTTGSLEQGKWLHAHMMKSG 326
>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
Length = 635
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/519 (40%), Positives = 311/519 (59%), Gaps = 32/519 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINC-- 59
G ++H Q LK GL S+ L+ +YG CG + A ++FDEM + N V + V+ C
Sbjct: 117 GFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFR 176
Query: 60 ----------------------------YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGL 91
Y++ G +E+A +FS + +D V W+ MI G+
Sbjct: 177 GNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGI 236
Query: 92 VRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH 151
NG + FRE+QR + PNEV++ VLSACSQ G+ E G+ +H ++ K
Sbjct: 237 AHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIV 296
Query: 152 IVGGALINMYSRCGDIDKALQVFEEMKE-RDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
V ALI+MYSRCG++ A VFE M+E R + ++ S+IAGLAMHG+ EAV +F EM
Sbjct: 297 SVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTA 356
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
G+ P ++F+ +L+ACSH GL++ G + F M R Y IEP+IEHYGC+VDL R G+ +
Sbjct: 357 YGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQ 416
Query: 271 EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYA 330
+AYDFI M I P I+ +LL AC HG ++L EQ+ +RL + +SG VLLSNAYA
Sbjct: 417 KAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYA 476
Query: 331 SSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQ 390
++GKWK+ IR M ++K S +EV +++F G+ + + ++K++E+
Sbjct: 477 TAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIIL 536
Query: 391 IVKLE-GYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCN 449
+K E GY+P L+D+E+ EKE ++ HSE+LA+ + L IR+VKNLR+C
Sbjct: 537 RLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICR 596
Query: 450 DCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
DCH+++KL + + +I+VRDRNRFH F++G+CSC DYW
Sbjct: 597 DCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 635
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 102/230 (44%), Gaps = 13/230 (5%)
Query: 80 DTVCWTAMIDGLVRNGEMARALDLFREMQRDN-VRPNEVTIVCVLSACSQLGALELGRWI 138
D + ++ G + E ++ +F EM R V P+ + V+ A +L G +
Sbjct: 61 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 120
Query: 139 HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRS 198
H KH ++ + VG LI MY CG ++ A +VF+EM + ++ +N++I
Sbjct: 121 HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDV 180
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGC 258
A E+F +M+ + V G + A G ++ IF M + +
Sbjct: 181 AGAREIFDKMLVRNHTSWNVMLAGYIKA----GELESAKRIFSEMPHRDDVS-----WST 231
Query: 259 IVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGE 305
++ ++ G E++ + ++ ++P+ + L +LSAC G + G+
Sbjct: 232 MIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGK 281
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/438 (43%), Positives = 283/438 (64%), Gaps = 4/438 (0%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ---RD 110
T +++ Y G V A VF + VK+ V W+AMI +NG+ AL+LFREM D
Sbjct: 213 TTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHD 272
Query: 111 NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
+V PN VT+V VL AC+ ALE G+ IH+Y+ + +D V ALI MY+RCG ++
Sbjct: 273 SV-PNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESG 331
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
+F+ M ++DV +NSLI+ +HG +A+++F EMI+ G P+ ++F+ VL ACSH
Sbjct: 332 QLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHT 391
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGS 290
GLV+ G ++F+SM +++GI+P +EHY C+VDLL R R +EA I +++I P + GS
Sbjct: 392 GLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGS 451
Query: 291 LLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
LL AC+IH ++L E+ +KRL ++G YVLL++ YA + W E +++ + +
Sbjct: 452 LLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSREL 511
Query: 351 QKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIED 410
QK PG S IEV +I+ F D +PQ EQ++ + L +K GY+P T++VL+D++
Sbjct: 512 QKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQ 571
Query: 411 WEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRD 470
EKE + HSE+LA+ +GLI+T TIR+ KNLR+C DCHS+ K I+ R+I+VRD
Sbjct: 572 EEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRD 631
Query: 471 RNRFHHFENGTCSCGDYW 488
NRFHHF++G CSCGDYW
Sbjct: 632 LNRFHHFKDGVCSCGDYW 649
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 158/324 (48%), Gaps = 10/324 (3%)
Query: 36 DAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNG 95
D QL + D +T +IN + E V+NA +VF + + + W A+ L G
Sbjct: 90 DVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAG 149
Query: 96 EMARALDLFREMQRDNVRPNEVTIVCVLSACSQ----LGALELGRWIHSYMGKHRIDLNH 151
L+L+ M V + T +L AC + L+ G+ IH+++ +H +
Sbjct: 150 RGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHV 209
Query: 152 IVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI-- 209
V L++MY+R G + A VF+EM ++V +++++IA A +G+ EA+E+FREM+
Sbjct: 210 HVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLN 269
Query: 210 NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRP 269
P VT V VL AC+ ++ G I + R G++ + ++ + +R G+
Sbjct: 270 THDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRR-GLDSILPVISALITMYARCGKL 328
Query: 270 EEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG-TYVLLSNA 328
E M D ++ SL+S+ +HG + +I + ++D + S +++ + A
Sbjct: 329 ESGQLIFDRMH-KKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGA 387
Query: 329 YASSGKWKEAVQIRAKM-KEAGVQ 351
+ +G +E ++ M KE G+Q
Sbjct: 388 CSHTGLVEEGKKLFESMVKEHGIQ 411
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 123/305 (40%), Gaps = 46/305 (15%)
Query: 87 MIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHR 146
+I L + G + +AL L + E+ I+ S AL+ +H +
Sbjct: 44 LIQSLCKQGNLKQALYLLSHESNPTQQTCELLILSAARRNSLSDALD----VHQLLVDGG 99
Query: 147 IDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
D + + LINM+S +D A +VF++ ++R + +N+L LA+ GR + +E++
Sbjct: 100 FDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYP 159
Query: 207 EMINQGIRPTKVTFVGVLNACSHG----GLVDLGFEIFQSMTRD-YGIEPQI-------- 253
M G+ + T+ +L AC + G EI + R YG +
Sbjct: 160 RMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMY 219
Query: 254 EHYGCI---------------------VDLLSRVGRPEEAYDFITNMKI-----APDHIM 287
+GC+ + ++ G+P EA + M + P+ +
Sbjct: 220 ARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVT 279
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVL--LSNAYASSGKWKEAVQIRAKM 345
+ S+L AC L+ G+ I +L R DS V+ L YA GK + I +M
Sbjct: 280 MVSVLQACAAFAALEQGKLIHAYILR-RGLDSILPVISALITMYARCGKLESGQLIFDRM 338
Query: 346 KEAGV 350
+ V
Sbjct: 339 HKKDV 343
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/470 (43%), Positives = 291/470 (61%), Gaps = 6/470 (1%)
Query: 25 VELYGKCGEFKD---AMQLFDEMPECN---DVVASTVMINCYVEHGLVENAFEVFSRVKV 78
V +G C KD +Q+ M D S+ +I+ Y + G + NA +VF+R++
Sbjct: 234 VTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQT 293
Query: 79 KDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWI 138
K+ V WTA++ +NG AL+ F EM+ D + PNE T +L++C+ + AL G+ +
Sbjct: 294 KNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLL 353
Query: 139 HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRS 198
H+ + K + + IVG ALINMYS+ G I+ A +VF EM RD T++++I GL+ HG
Sbjct: 354 HTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLG 413
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGC 258
EA+ +F+EM+ P VTFVGVL+AC+H G V GF + + GIEP +EHY C
Sbjct: 414 REALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTC 473
Query: 259 IVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSAD 318
IV LL + GR +EA +F+ + + D + +LLSAC +H LG+++A+ +L D
Sbjct: 474 IVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGD 533
Query: 319 SGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQR 378
GTY+LLSN YA + +W V+IR M+E V+KEPG S IE+ N IH F+ HP+
Sbjct: 534 VGTYILLSNMYAKAKRWDGVVKIRKLMRERNVKKEPGASWIEIRNSIHVFVSEGKTHPES 593
Query: 379 EQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTT 438
QIY+K+QEL +++ GY P V HD+ED +K ++ HSE+LAI YGL+ T
Sbjct: 594 NQIYEKVQELLTMIRPMGYVPDIAAVFHDVEDEQKREYVSYHSEKLAIAYGLMKTPSGAP 653
Query: 439 IRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
IRV+KNLR+C DCHS +KLI+ +T R IIVRD NRFH F +G CSC DYW
Sbjct: 654 IRVIKNLRMCVDCHSAVKLISKVTNRMIIVRDANRFHCFGDGGCSCADYW 703
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 157/356 (44%), Gaps = 45/356 (12%)
Query: 30 KCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMID 89
K G+ A + +++V +IN Y + + A +F ++ ++ V W A++
Sbjct: 42 KFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMA 101
Query: 90 GLVRNGEMARALDLFREM-QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRID 148
G NG + L LF+ M D +RPNE ++S+CS G + G H Y K +
Sbjct: 102 GYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLV 161
Query: 149 LNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM 208
+ V ALI MYSR D+ A+ V+ E+ DV +YN +I GL +G EA+E+ M
Sbjct: 162 FHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRM 221
Query: 209 INQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR------DYGIEPQIEHYG----- 257
+++ I VT+V CSH + LG ++ M R + I+ YG
Sbjct: 222 VDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNI 281
Query: 258 -------------------CIVDLLSRVGRPEEAYDFITNMKI---APDHIMLGSLLSAC 295
I+ S+ G EEA +F M++ P+ LL++C
Sbjct: 282 LNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSC 341
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSG--TYVLLSNA----YASSGKWKEAVQIRAKM 345
G LG +LL R SG ++++ NA Y+ SG + A ++ +M
Sbjct: 342 A--GISALGH---GKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEM 392
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/458 (41%), Positives = 288/458 (62%), Gaps = 10/458 (2%)
Query: 31 CGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDG 90
CG K+ ++ +DV + +I+ + + G E+A VF + D + W ++I G
Sbjct: 183 CGIIKEGLE--------SDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGG 234
Query: 91 LVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLN 150
+N AL+LF+ M+R + T+ VL AC+ L LELG H ++ K+ DL
Sbjct: 235 FAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDL- 293
Query: 151 HIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
I+ AL++MY +CG ++ AL+VF +MKERDV T++++I+GLA +G S EA+++F M +
Sbjct: 294 -ILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKS 352
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
G +P +T VGVL ACSH GL++ G+ F+SM + YGI+P EHYGC++DLL + G+ +
Sbjct: 353 SGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLD 412
Query: 271 EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYA 330
+A + M+ PD + +LL AC++ + L E AK+++ D+GTY LLSN YA
Sbjct: 413 DAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYA 472
Query: 331 SSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQ 390
+S KW +IR +M++ G++KEPGCS IEVN +IH FI+GD HPQ ++ KK+ +L
Sbjct: 473 NSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIH 532
Query: 391 IVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCND 450
+ GY P T VL D+E + E +L HSE+LA+ +GL++ IR+ KNLR+C D
Sbjct: 533 RLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGD 592
Query: 451 CHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
CH KL + + R I++RD R+HHF++G CSCGDYW
Sbjct: 593 CHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 133/258 (51%), Gaps = 7/258 (2%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
V+IN YV+ L+ +A ++F ++ ++ + WT MI + +AL+L M RDNVR
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
PN T VL +C+ + + R +H + K ++ + V ALI+++++ G+ + AL V
Sbjct: 160 PNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 216
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV 233
F+EM D +NS+I G A + RS A+E+F+ M G + T VL AC+ L+
Sbjct: 217 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 276
Query: 234 DLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLS 293
+LG + + + + + +VD+ + G E+A MK D I +++S
Sbjct: 277 ELGMQAHVHIVK---YDQDLILNNALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMIS 332
Query: 294 ACKIHGKLQLGEQIAKRL 311
+G Q ++ +R+
Sbjct: 333 GLAQNGYSQEALKLFERM 350
>gi|356550382|ref|XP_003543566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 572
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/444 (43%), Positives = 287/444 (64%), Gaps = 4/444 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D+ V+++ Y E G + A +F R+ +D V WT+MI GLV + A++LF M
Sbjct: 129 DLYIQNVLLHMYSEFGDLLLARSLFDRMPHRDVVSWTSMIGGLVNHDLPVEAINLFERML 188
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHI--VGGALINMYSRCGD 166
+ V NE T++ VL AC+ GAL +GR +H+ + + I+++ V AL++MY++ G
Sbjct: 189 QCGVEVNEATVISVLRACADSGALSMGRKVHANLEEWGIEIHSKSNVSTALVDMYAKGGC 248
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
I A +VF+++ RDV + ++I+GLA HG +A++MF +M + G++P + T VL A
Sbjct: 249 IASARKVFDDVVHRDVFVWTAMISGLASHGLCKDAIDMFVDMESSGVKPDERTVTAVLTA 308
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
C + GL+ GF +F + R YG++P I+H+GC+VDLL+R GR +EA DF+ M I PD +
Sbjct: 309 CRNAGLIREGFMLFSDVQRRYGMKPSIQHFGCLVDLLARAGRLKEAEDFVNAMPIEPDTV 368
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRL--LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAK 344
+ +L+ ACK+HG E++ K L D R+ DSG+Y+L SN YAS+GKW ++R
Sbjct: 369 LWRTLIWACKVHGDADRAERLMKHLEIQDMRADDSGSYILASNVYASTGKWCNKAEVREL 428
Query: 345 MKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVV 404
M + G+ K PG S IEV+ +HEF++GD HP+ E+I+ ++ E+ ++ EGY P V
Sbjct: 429 MNKKGLVKPPGTSRIEVDGGVHEFVMGDYNHPEAEEIFVELAEVVDKIRKEGYDPRVSEV 488
Query: 405 LHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKR 464
L +++D EK L HSE+LA+ YGLI +TIR+VKNLR C DCH +KLI+ I KR
Sbjct: 489 LLEMDDEEKAVQLLHHSEKLALAYGLIRIGHGSTIRIVKNLRSCEDCHEFMKLISKIYKR 548
Query: 465 KIIVRDRNRFHHFENGTCSCGDYW 488
IIVRDR RFHHF+NG CSC DYW
Sbjct: 549 DIIVRDRIRFHHFKNGECSCKDYW 572
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 150/340 (44%), Gaps = 65/340 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
E ++HGQV+KLG+ ++R KL +++ A+ F ++ ++++ +N Y
Sbjct: 8 EALQVHGQVVKLGMGHKDASR-KLSKVFTFA-----ALSPFGDLNYARLLLSTNPTLNSY 61
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ L+ FS+ + AL LF M P+ T
Sbjct: 62 YYNTLLR----AFSQTPLPTPPF---------------HALSLFLSMPSP---PDNFTFP 99
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L CS+ LG+ +H+ + K + + L++MYS GD+ A +F+ M R
Sbjct: 100 FLLKCCSRSKLPPLGKQLHALLTKLGFAPDLYIQNVLLHMYSEFGDLLLARSLFDRMPHR 159
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++ S+I GL H +EA+ +F M+ G+ + T + VL AC+ G + +G ++
Sbjct: 160 DVVSWTSMIGGLVNHDLPVEAINLFERMLQCGVEVNEATVISVLRACADSGALSMGRKVH 219
Query: 241 QSMTRDYGIEPQ---------IEHY---GCI---------------------VDLLSRVG 267
++ ++GIE ++ Y GCI + L+ G
Sbjct: 220 ANL-EEWGIEIHSKSNVSTALVDMYAKGGCIASARKVFDDVVHRDVFVWTAMISGLASHG 278
Query: 268 RPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLG 304
++A D +M+ + PD + ++L+AC+ G ++ G
Sbjct: 279 LCKDAIDMFVDMESSGVKPDERTVTAVLTACRNAGLIREG 318
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 44/221 (19%)
Query: 2 GREIHGQVLKLGL----RSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMI 57
GR++H + + G+ +SN ST LV++Y K G A ++FD++ DV T MI
Sbjct: 215 GRKVHANLEEWGIEIHSKSNVST--ALVDMYAKGGCIASARKVFDDVVH-RDVFVWTAMI 271
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ HGL ++ A+D+F +M+ V+P+E
Sbjct: 272 SGLASHGLCKD-------------------------------AIDMFVDMESSGVKPDER 300
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVF 174
T+ VL+AC G + G + S + + + + H G L+++ +R G + +A
Sbjct: 301 TVTAVLTACRNAGLIREGFMLFSDVQRRYGMKPSIQHF--GCLVDLLARAGRLKEAEDFV 358
Query: 175 EEMK-ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIR 214
M E D + +LI +HG + A + + + Q +R
Sbjct: 359 NAMPIEPDTVLWRTLIWACKVHGDADRAERLMKHLEIQDMR 399
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/504 (41%), Positives = 295/504 (58%), Gaps = 34/504 (6%)
Query: 17 NRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRV 76
N T +V Y K G A +LF+ MPE N+V + T M+ Y + G ++ AFE+F +
Sbjct: 206 NVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEV-SWTAMLMGYTQSGRMKEAFELFEAM 264
Query: 77 KVK-------------------------------DTVCWTAMIDGLVRNGEMARALDLFR 105
VK D W AMI R G AL LF
Sbjct: 265 PVKWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFA 324
Query: 106 EMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG 165
MQR+ V N +++ VLS C+ L +L+ GR +H+ + + D + V LI MY +CG
Sbjct: 325 RMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCG 384
Query: 166 DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
D+ +A +F +DV +NS+I G + HG EA+ +F +M + G++P +VTF+GVL+
Sbjct: 385 DLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLS 444
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDH 285
ACS+ G V GFEIF++M Y +EP IEHY C+VDLL R GR +EA + + M + PD
Sbjct: 445 ACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDA 504
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
I+ G+LL AC+ H KL L E ++L ++G YVLLS+ YA+ G+W++ +R K+
Sbjct: 505 IVWGALLGACRNHMKLDLAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKI 564
Query: 346 KEAGVQKEPGCSSIEVNNEIHEFILGDIR-HPQREQIYKKMQELKQIVKLEGYSPSTEVV 404
V K PGCS IEV ++H F GD + HP++ I + +++L ++ GY P V
Sbjct: 565 NRR-VIKFPGCSWIEVEKKVHMFTGGDSKSHPEQHMITQMLEKLSGFLREAGYCPDGSFV 623
Query: 405 LHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKR 464
LHD+++ EK +L HSERLA+ YGL+ IRV+KNLRVC DCHS IKLIA +T R
Sbjct: 624 LHDVDEEEKTHSLGYHSERLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGR 683
Query: 465 KIIVRDRNRFHHFENGTCSCGDYW 488
+II+RD NRFHHF++G+CSC D+W
Sbjct: 684 EIILRDANRFHHFKDGSCSCKDFW 707
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 153/318 (48%), Gaps = 42/318 (13%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
+V Y + + +DA+ LFD+MP+ N V+ MI+ YV++G+V +A +VF + ++ V
Sbjct: 58 MVSAYFESHKPRDALLLFDQMPQRN-TVSFNGMISGYVKNGMVADARKVFDVMPERNVVS 116
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
WT+M+ G V+ G + A LF EM R NV V I +L A +L I
Sbjct: 117 WTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPE--- 173
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
K + + +++GG Y + G +D+A ++F+EMK R+V T+ ++++G A +GR A +
Sbjct: 174 KDVVVVTNMIGG-----YCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARK 228
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT-----------RDYGIEPQ 252
+F M + +V++ +L + G + FE+F++M +G+ +
Sbjct: 229 LFEVMPER----NEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGE 284
Query: 253 IEH---------------YGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSA 294
+ + ++ + R G EA M+ +A + + S+LS
Sbjct: 285 MHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSV 344
Query: 295 CKIHGKLQLGEQIAKRLL 312
C L G Q+ RL+
Sbjct: 345 CASLASLDHGRQVHARLV 362
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 153/329 (46%), Gaps = 32/329 (9%)
Query: 28 YGKCGEFKDAMQLFDEMPECNDVVAS-TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTA 86
YG+ G+ +A ++FD P +AS M++ Y E +A +F ++ ++TV +
Sbjct: 29 YGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQRNTVSFNG 88
Query: 87 MIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHR 146
MI G V+NG +A A +F M NV V+ ++ Q G +E + M +
Sbjct: 89 MISGYVKNGMVADARKVFDVMPERNV----VSWTSMVRGYVQEGMVEEAEKLFWEMPRRN 144
Query: 147 -IDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMF 205
+ ++GG L + ID A ++F+ + E+DV ++I G GR EA E+F
Sbjct: 145 VVSWTVMIGGLL-----KESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELF 199
Query: 206 REMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSR 265
EM + + T+ +++ + G VD+ ++F+ M E + ++ ++
Sbjct: 200 DEMKVRNV----FTWTTMVSGYAKNGRVDVARKLFEVMP-----ERNEVSWTAMLMGYTQ 250
Query: 266 VGRPEEAYDFITNMK----IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT 321
GR +EA++ M +A + ++L L A ++H + E + +R D GT
Sbjct: 251 SGRMKEAFELFEAMPVKWIVACNEMILQFGL-AGEMHRARMMFEGMKER-------DEGT 302
Query: 322 YVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
+ + + G EA+ + A+M+ GV
Sbjct: 303 WNAMIKVFERKGLDLEALGLFARMQREGV 331
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 34/196 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H ++++ + L+ +Y KCG+ A +F+ DVV MI Y
Sbjct: 354 GRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFL-FKDVVMWNSMITGYS 412
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+HGL E AL++F +M V+P+EVT +
Sbjct: 413 QHGLGEE-------------------------------ALNVFHDMCSSGVQPDEVTFIG 441
Query: 122 VLSACSQLGALELGRWIHSYMG-KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VLSACS G ++ G I M ++++ ++++ R G +D+A+++ E+M E
Sbjct: 442 VLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPME 501
Query: 180 RDVTTYNSLIAGLAMH 195
D + +L+ H
Sbjct: 502 PDAIVWGALLGACRNH 517
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/440 (42%), Positives = 284/440 (64%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D++ +++ Y + G++++A F + KD+V ++A++ G V+NG A AL +FR MQ
Sbjct: 346 DILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQ 405
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ P+ T++ VL ACS L AL+ G H Y+ + ++ ALI+MYS+CG I
Sbjct: 406 LSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKIS 465
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +VF M D+ ++N++I G +HG +EA+ +F +++ G++P +TF+ +L++CS
Sbjct: 466 FAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCS 525
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLV G F +M+RD+ I P++EH C+VD+L R G +EA+ FI NM PD +
Sbjct: 526 HSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIW 585
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+LLSAC+IH ++LGE+++K++ +G +VLLSN Y+++G+W +A IR K+
Sbjct: 586 SALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDW 645
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
G++K PGCS IE+N +H F+ GD H Q QI +K++EL +K GY V D+
Sbjct: 646 GLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDV 705
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
E+ EKE L HSE+LAI +G+++ K I V KNLRVC DCH+ IK + ITKR+I V
Sbjct: 706 EEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHAAIKFMTVITKREITV 765
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD NRFHHF+NGTC+CGD+W
Sbjct: 766 RDANRFHHFKNGTCNCGDFW 785
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 137/254 (53%), Gaps = 5/254 (1%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
N VV T +++ Y + + A ++F + V++ V W+AMI G V + M AL+LF +M
Sbjct: 243 NGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQM 302
Query: 108 -QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
+D + P VT+ VL AC++L L GR +H Y+ K L+ ++G L++MY++CG
Sbjct: 303 ILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGV 362
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
ID A++ F+ M +D +++++++G +G + A+ +FR M GI P T +GVL A
Sbjct: 363 IDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPA 422
Query: 227 CSHGGLVDLGFEIFQSM-TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDH 285
CSH + GF + R + + I ++D+ S+ G+ A + M D
Sbjct: 423 CSHLAALQHGFCSHGYLIVRGFATDTLI--CNALIDMYSKCGKISFAREVFNRMD-RHDI 479
Query: 286 IMLGSLLSACKIHG 299
+ +++ IHG
Sbjct: 480 VSWNAMIIGYGIHG 493
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 106/224 (47%), Gaps = 32/224 (14%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
E ++IH LK ++ S KL LY C + A +LFDE+P
Sbjct: 26 EAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN-------------- 71
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ W +I NG A+DL+ M VRPN+ T
Sbjct: 72 ------------------PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYP 113
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL ACS L A+E G IHS+ ++ + V AL++ Y++CG + +A ++F M R
Sbjct: 114 FVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR 173
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL 224
DV +N++IAG +++G +AV++ +M +GI P T VGVL
Sbjct: 174 DVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVL 217
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 151/321 (47%), Gaps = 24/321 (7%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPEC---NDVVASTVMINCY 60
+++ +L LG+R N+ T +++ +D +++ +DV T +++ Y
Sbjct: 95 DLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFY 154
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ G++ A +FS + +D V W AMI G G A+ L +MQ + + PN TIV
Sbjct: 155 AKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIV 214
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL + AL G+ +H Y + D +VG L++MY++C + A ++F+ M R
Sbjct: 215 GVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVR 274
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMI-NQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+ +++++I G EA+E+F +MI + PT VT VL AC+ L DL
Sbjct: 275 NEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAK--LTDL---- 328
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLL---------SRVGRPEEAYDFITNMKIAPDHIMLGS 290
+R + I G ++D+L ++ G ++A F M D + +
Sbjct: 329 ----SRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMN-PKDSVSFSA 383
Query: 291 LLSACKIHGKLQLGEQIAKRL 311
++S C +G + I + +
Sbjct: 384 IVSGCVQNGNAAVALSIFRMM 404
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 2/178 (1%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L AC Q +L + IH + K+ + + V L +Y C + A ++F+E+
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +N +I A +G A++++ M++ G+RP K T+ VL ACS ++ G EI
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI-H 132
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
S + +G+E + +VD ++ G EA ++M D + ++++ C ++G
Sbjct: 133 SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMS-HRDVVAWNAMIAGCSLYG 189
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 113/250 (45%), Gaps = 42/250 (16%)
Query: 6 HGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGL 65
HG ++ G ++ L+++Y KCG+ A ++F+ M +D+V+ MI Y HGL
Sbjct: 436 HGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDR-HDIVSWNAMIIGYGIHGL 494
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
G+ AL LF ++ ++P+++T +C+LS+
Sbjct: 495 ------------------------GM-------EALGLFHDLLALGLKPDDITFICLLSS 523
Query: 126 CSQLGALELGR-WIHSYMGKHRI--DLNHIVGGALINMYSRCGDIDKALQVFEEMK-ERD 181
CS G + GR W + I + H + ++++ R G ID+A M E D
Sbjct: 524 CSHSGLVMEGRLWFDAMSRDFSIVPRMEHCI--CMVDILGRAGLIDEAHHFIRNMPFEPD 581
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKV-TFVGVLNACSHGGLVDLGFEIF 240
V +++L++ +H ++IE E + I Q + P FV + N S G D I
Sbjct: 582 VRIWSALLSACRIH-KNIELGEEVSKKI-QSLGPESTGNFVLLSNIYSAAGRWDDAAHI- 638
Query: 241 QSMTRDYGIE 250
+ +D+G++
Sbjct: 639 RITQKDWGLK 648
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/472 (42%), Positives = 288/472 (61%), Gaps = 1/472 (0%)
Query: 17 NRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRV 76
N T ++ Y +CG+ A++LF++ P VVA T MI Y++ G + A +F ++
Sbjct: 99 NVVTWNAMISGYVECGDLDSALKLFEKAP-FKSVVAWTAMITGYMKLGRIGLAERLFEKM 157
Query: 77 KVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGR 136
K+ V W AMI G + N + LFR M ++PN T+ L CS+L AL+LGR
Sbjct: 158 PEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGR 217
Query: 137 WIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHG 196
+H + K + + G +LI+MY +CG ++ ++F ++ RDV T+N++I+G A HG
Sbjct: 218 QVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQHG 277
Query: 197 RSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHY 256
+A+ +F EMI +G++P +TFV VL AC+H G DLG + F SM +DYG+ + +HY
Sbjct: 278 EGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHY 337
Query: 257 GCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRS 316
C+VDLL R G+ EA D I M P + G+LL AC+IH ++ E +++LL+
Sbjct: 338 TCMVDLLGRAGKLVEAVDLIEKMPFKPHAAVFGTLLGACRIHKNTEMAEFASQKLLNLDP 397
Query: 317 ADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHP 376
A + YV L+N YA++ +W ++R MK V K PG S IEV + H+F GD HP
Sbjct: 398 ASATGYVQLANVYAATKRWDHVARVRKSMKSCKVVKTPGYSWIEVKSMAHQFRSGDKFHP 457
Query: 377 QREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPY 436
+ I+ K++EL++ +KL GY P E LHD+ + +KE L HSE+LAI YGLI P
Sbjct: 458 ELASIHGKLKELEKKMKLAGYVPDLEFALHDVGEEQKEQLLLWHSEKLAIAYGLIKLPPG 517
Query: 437 TTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
T IRV KNLRVC DCH IK I+ I +R+IIVRD RFHHF++G CSC DYW
Sbjct: 518 TPIRVFKNLRVCGDCHRAIKYISQIERREIIVRDTTRFHHFKDGHCSCADYW 569
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 36/220 (16%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H V K L + + L+ +Y KCG +D +LF ++P DVV MI+ Y
Sbjct: 216 GRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPR-RDVVTWNAMISGYA 274
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+H GE +AL LF EM ++P+ +T V
Sbjct: 275 QH-------------------------------GEGKKALGLFDEMIEKGMKPDWITFVA 303
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL AC+ G +LG ++ HS + + ++++ R G + +A+ + E+M +
Sbjct: 304 VLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFK 363
Query: 181 D-VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVT 219
+ +L+ +H + A ++++N + P T
Sbjct: 364 PHAAVFGTLLGACRIHKNTEMAEFASQKLLN--LDPASAT 401
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/488 (38%), Positives = 290/488 (59%), Gaps = 33/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR IH V+K+GL + L +Y KCG+ A LFD+M
Sbjct: 240 QGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKM---------------- 283
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
K + + W AMI G +NG A+D+F EM +VRP+ ++I
Sbjct: 284 ----------------KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+SAC+Q+G+LE R ++ Y+G+ + + ALI+M+++CG ++ A VF+ +R
Sbjct: 328 SAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR 387
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++++I G +HGR+ EA+ ++R M G+ P VTF+G+L AC+H G+V G+ F
Sbjct: 388 DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF 447
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
M D+ I PQ +HY C++DLL R G ++AY+ I M + P + G+LLSACK H
Sbjct: 448 NLMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRH 506
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++LGE A++L +++G YV LSN YA++ W ++R +MKE G+ K+ GCS +E
Sbjct: 507 VELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVE 566
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
V + F +GD HP+ E+I ++++ ++ +K G+ + + LHD+ D E E L H
Sbjct: 567 VRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSH 626
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SER+AI YGLIST T +R+ KNLR C +CH+ KLI+ + R+I+VRD NRFHHF++G
Sbjct: 627 SERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDG 686
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 687 VCSCGDYW 694
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 155/300 (51%), Gaps = 34/300 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H QV +LG ++ + L+ LY KC A +F+ +P
Sbjct: 138 GRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLP---------------- 181
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ + V WTA++ +NGE AL++F M++ +V+P+ V +V
Sbjct: 182 --------------LPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVS 227
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL+A + L L+ GR IH+ + K +++ + +L MY++CG + A +F++MK +
Sbjct: 228 VLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPN 287
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ +N++I+G A +G + EA++MF EMIN+ +RP ++ ++AC+ G ++ +++
Sbjct: 288 LILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYE 347
Query: 242 SMTR-DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ R DY + I ++D+ ++ G E A + + + D ++ +++ +HG+
Sbjct: 348 YVGRSDYRDDVFIS--SALIDMFAKCGSVEGA-RLVFDRTLDRDVVVWSAMIVGYGLHGR 404
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 144/335 (42%), Gaps = 67/335 (20%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
++IH ++L LGL+ + KL+ G+ A Q+FD++P
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRP--------------- 82
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
++F W A+I G RN AL ++ MQ V P+ T +
Sbjct: 83 --------QIFP---------WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHL 125
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE--EMKER 180
L ACS L L++GR++H+ + + D + V LI +Y++C + A VFE + ER
Sbjct: 126 LKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPER 185
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------H 229
+ ++ ++++ A +G +EA+E+F M ++P V V VLNA + H
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 230 GGLVDLGFEI----FQSMTRDYG---------------IEPQIEHYGCIVDLLSRVGRPE 270
+V +G EI S+ Y P + + ++ ++ G
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 271 EAYDF---ITNMKIAPDHIMLGSLLSACKIHGKLQ 302
EA D + N + PD I + S +SAC G L+
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLE 340
>gi|222624541|gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
Length = 669
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/515 (38%), Positives = 294/515 (57%), Gaps = 39/515 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+IH +LGL N + +Y +CG DA Q+F+EM + DVV+ MI+ +
Sbjct: 31 GRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEM-QYRDVVSWNAMISGFA 89
Query: 62 EHGLVENAFEVF--------------------------------------SRVKVKDTVC 83
GL A +VF ++ K +
Sbjct: 90 HAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGKARVEDIALLKGVFDEMRFKGLIS 149
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W AM+ N A++LF MQ+D + P+ VT+ VL +C ++ AL LG+ IH +
Sbjct: 150 WNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIK 209
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
+ R+ + ++ AL++MY+ CG + +A VF+ M RDV ++ S+I+ HG EA++
Sbjct: 210 RRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAID 269
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
+F +M QG+ P + FV +L ACSH GL+D+G F SMT ++ I P++EHY C+VDLL
Sbjct: 270 LFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLL 329
Query: 264 SRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV 323
R G EAYDFI M I P+ + G+LL AC+IH + +G A LL +G YV
Sbjct: 330 GRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYV 389
Query: 324 LLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYK 383
LLSN YA +G+W + +R+ M+ G++K PG S+ E+ + +H F +GD HPQ + IYK
Sbjct: 390 LLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSKMIYK 449
Query: 384 KMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVK 443
K+ EL + ++ GY+P E LHD+E+ +KE L++HSE+LAI + LI+T P T IR+
Sbjct: 450 KLSELLRRIREMGYNPEVEATLHDVEEEDKEGHLSVHSEKLAIAFLLINTNPGTPIRITM 509
Query: 444 NLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFE 478
NLR C+DCH KLI+ I R+II++D NR H+ +
Sbjct: 510 NLRTCSDCHHAAKLISTIAGREIILKDVNRIHYMK 544
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 118/248 (47%), Gaps = 18/248 (7%)
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
Q + P + + +C+ L LGR IHS + +D N V + I+MY+RCG
Sbjct: 4 QGPGLLPGPLHLPVGFKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRP 63
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN-QGIRPTKVTFVGVLNA 226
D A Q+FEEM+ RDV ++N++I+G A G A+++FRE++ Q +P T +L +
Sbjct: 64 DDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPS 123
Query: 227 CSHGGLVDLGF--EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---I 281
+ D+ +F M I + ++ + + EA + M+ I
Sbjct: 124 MGKARVEDIALLKGVFDEMRFKGLIS-----WNAMLAVYTNNEMHVEAVELFMRMQKDGI 178
Query: 282 APDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNA----YASSGKWKE 337
PD + L ++L +C L LG++I + + R S +LL NA YA+ G KE
Sbjct: 179 EPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSS---MLLENALMDMYANCGCLKE 235
Query: 338 AVQIRAKM 345
A + M
Sbjct: 236 ARDVFDSM 243
>gi|242061934|ref|XP_002452256.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor]
gi|241932087|gb|EES05232.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor]
Length = 590
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/470 (42%), Positives = 299/470 (63%), Gaps = 6/470 (1%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECN-DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTV 82
L++LY G DA ++FD DVV+ M++ Y + G +E A EVF R+ + V
Sbjct: 122 LLKLYCALGMLPDARRVFDTSGATALDVVSWNTMVSGYGKCGDLEAAREVFVRMPERGLV 181
Query: 83 CWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM 142
W+AMID VR GE + AL +F +M + +P+ V +V VL C+ LGALE GRW+H ++
Sbjct: 182 SWSAMIDACVRTGEFSEALRVFDQMTGNGFKPDAVVLVSVLKTCAHLGALERGRWVHRFL 241
Query: 143 GKHRI---DLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSI 199
R+ N ++ AL++MY +CG +++A VF+ ++ DV +N++I GLAM+G
Sbjct: 242 KAERLGGRPGNVMLETALVDMYCKCGCMNEAWWVFDGVQSHDVVLWNAMIGGLAMNGHGK 301
Query: 200 EAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI 259
A+E+FR M+++G P + TFV L AC H G VD G ++F+SM RD+GIEP+ EHYGC+
Sbjct: 302 RALELFRRMLDKGFVPNESTFVVALCACIHTGRVDEGEDVFRSM-RDHGIEPRREHYGCL 360
Query: 260 VDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADS 319
DLL R G EEA + +M + P G+L+S+C +H + +GE++ K+L++ D
Sbjct: 361 ADLLGRAGLLEEAEGVLLDMPMEPHASQWGALMSSCLMHNNVGVGERVGKKLIELEPDDG 420
Query: 320 GTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQRE 379
G YV L N YA +G W++A +R M+E G +KE G S IE N +HEF GD RHPQ
Sbjct: 421 GRYVALFNLYAVNGLWEDAKALRKMMEERGAKKETGLSFIEWNGLVHEFRSGDTRHPQTR 480
Query: 380 QIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE-KEWALAIHSERLAICYGLISTKPYTT 438
IY +++++Q ++L GY T VL D+++ E K L+ HSERLA+ +G+++
Sbjct: 481 LIYALLEDMEQRLQLIGYVKDTSQVLLDMDNEEDKGNTLSYHSERLALAFGILNIPHDMP 540
Query: 439 IRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
IR+VKNLRVC DCH KL++ + +R+IIVRDR+RFH F +G CSC D+W
Sbjct: 541 IRIVKNLRVCRDCHVHAKLVSKLYQREIIVRDRHRFHLFRDGVCSCNDFW 590
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/469 (40%), Positives = 282/469 (60%), Gaps = 34/469 (7%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
L+++Y KC FK A +FD++P ++ ++ V
Sbjct: 307 LIDMYSKCRSFKAARSIFDDIP------------------------------LEERNVVT 336
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRD--NVRPNEVTIVCVLSACSQLGALELGRWIHSY 141
WT MI G + G+ AL LF EM + V PN TI C+L AC+ L A+ +G+ IH+Y
Sbjct: 337 WTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAY 396
Query: 142 MGKH-RIDLN-HIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSI 199
+ +H + D + + V LINMYS+CGD+D A VF+ M ++ ++ S++ G MHGR
Sbjct: 397 VLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGS 456
Query: 200 EAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI 259
EA+++F +M G P +TF+ VL ACSH G+VD G F SM+ DYG+ P+ EHY
Sbjct: 457 EALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYA 516
Query: 260 VDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADS 319
+DLL+R GR ++A+ + +M + P ++ +LLSAC++H ++L E +L++ + +
Sbjct: 517 IDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAEND 576
Query: 320 GTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQRE 379
G+Y L+SN YA++G+WK+ +IR MK++G++K PGCS ++ F +GD HP
Sbjct: 577 GSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSP 636
Query: 380 QIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTI 439
QIY ++ L +K GY P T LHD+++ EK L HSE+LA+ YGL++T P I
Sbjct: 637 QIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPI 696
Query: 440 RVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
R+ KNLRVC DCHS I+ I +I+VRD +RFHHF+NG+CSCG YW
Sbjct: 697 RITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 745
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 171/319 (53%), Gaps = 21/319 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+ +E+HG ++ G + L++ Y KCG ++A+++F+ M E DVV+ M+ Y
Sbjct: 138 QTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMM-EFKDVVSWNAMVAGY 196
Query: 61 VEHGLVENAFEVFSRVKVK----DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
+ G + AFE+F ++ + D V WTA+I G + G AL++FR+M PN
Sbjct: 197 SQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNC 256
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKH-RIDLNHIVGG---------ALINMYSRCGD 166
VTI+ VLSAC+ LGA G IH+Y K+ + L++ GG ALI+MYS+C
Sbjct: 257 VTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRS 316
Query: 167 IDKALQVFEE--MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ--GIRPTKVTFVG 222
A +F++ ++ER+V T+ +I G A +G S +A+++F EMI++ G+ P T
Sbjct: 317 FKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISC 376
Query: 223 VLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYG-CIVDLLSRVGRPEEAYDFITNMKI 281
+L AC+H + +G +I + R + + C++++ S+ G + A +M
Sbjct: 377 ILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMS- 435
Query: 282 APDHIMLGSLLSACKIHGK 300
I S+++ +HG+
Sbjct: 436 QKSAISWTSMMTGYGMHGR 454
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 171/437 (39%), Gaps = 120/437 (27%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G HG + G SN LV +Y +CG ++A +FDE+
Sbjct: 29 GSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEI----------------- 71
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM------QRDNVRPN 115
++ + D + W +++ V++ ALDLF +M + N R +
Sbjct: 72 ------------TQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 119
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
++IV +L AC L A+ + +H ++ L+ VG ALI+ Y++CG ++ A++VF
Sbjct: 120 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFN 179
Query: 176 EMKERDVTTYNSLIAGLAMHGR-----------------------------------SIE 200
M+ +DV ++N+++AG + G S E
Sbjct: 180 MMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHE 239
Query: 201 AVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI--------FQSMTRDYGIEPQ 252
A+ +FR+MI G P VT + VL+AC+ G G EI ++ D+G E +
Sbjct: 240 ALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDE 299
Query: 253 -IEHYGCIVDLLSR---------------------------------VGRPEEAYDFITN 278
+ Y ++D+ S+ G +A
Sbjct: 300 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 359
Query: 279 M-----KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVL---LSNAYA 330
M +AP+ + +L AC +++G+QI +L DS Y + L N Y+
Sbjct: 360 MISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYS 419
Query: 331 SSGKWKEAVQIRAKMKE 347
G A + M +
Sbjct: 420 KCGDVDTARHVFDSMSQ 436
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/501 (37%), Positives = 303/501 (60%), Gaps = 18/501 (3%)
Query: 1 EGR--EIHGQVLKL---GLRSNRSTRLKLVELYGKCGEFKDAMQL--------FDEMPEC 47
EGR E G V K+ G R + T ++ ++ +C + K +++ FD
Sbjct: 148 EGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRNGFD----- 202
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+DV + +I+ Y + + +VF + V+D + W +++ G +NG + AL +FR M
Sbjct: 203 SDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRM 262
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ VRP VT ++ C L +L G+ +H+Y+ + N + +LI+MY +CG+I
Sbjct: 263 LQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEI 322
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A +F++M DV ++ ++I G A+HG + EA+ +F M +P +TF+ VL AC
Sbjct: 323 SIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTAC 382
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SH GLVD G++ F+SM+ YGI P +EH+ + D L R G +EAY+FI+ M+I P +
Sbjct: 383 SHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASV 442
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+LL AC++H L E++AK++++ G++V+LSN Y++SG+W EA +R M++
Sbjct: 443 WSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRESMRK 502
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
G++K+P CS IEV +++H F+ D HP ++I + + + EG+ P+TE V D
Sbjct: 503 KGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMAREGHVPNTEDVFQD 562
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
IE+ K + L HSE+LAI +G+IST T IRV+KNLRVC DCH++ K I+ + R+I+
Sbjct: 563 IEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRVMKNLRVCIDCHTVTKFISKLADREIV 622
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
VRD NRFHHF++G CSCGD+W
Sbjct: 623 VRDANRFHHFKDGNCSCGDFW 643
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 193/458 (42%), Gaps = 70/458 (15%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H ++ G ++R T L+ LY K C+ + ++ V I V
Sbjct: 69 GASLHALAIRSGAFADRFTANALLNLYCKV--------------PCSYLDSTGVAI---V 111
Query: 62 EHGLVENAFE----VFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ AFE VF + +D V W ++ G G AL R+M R+ RP+
Sbjct: 112 DVPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSF 171
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T+ VL ++ ++ G +H + ++ D + VG +LI+MY+ C D +++VF+ +
Sbjct: 172 TLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNL 231
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS--------- 228
RD +NSL+AG A +G EA+ +FR M+ G+RP VTF ++ C
Sbjct: 232 PVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGK 291
Query: 229 --HGGLVDLGFE----IFQSMTRDYGIEPQIEHYGCIVDLLSRV---------------G 267
H ++ GFE I S+ Y +I CI D +S G
Sbjct: 292 QLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHG 351
Query: 268 RPEEAYDFITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT--Y 322
EA M++ P+HI ++L+AC G + G + K + + +
Sbjct: 352 PAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHF 411
Query: 323 VLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIY 382
L++ +G+ EA +KM+ I+ + +L R + +
Sbjct: 412 AALADTLGRAGELDEAYNFISKMQ------------IKPTASVWSTLLRACRVHKNTMLA 459
Query: 383 KKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+++ K+I++LE S + VVL ++ W A H
Sbjct: 460 EEVA--KKIMELEPRSIGSHVVLSNMYSASGRWNEAAH 495
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 108/250 (43%), Gaps = 23/250 (9%)
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV--TIVCVLSACSQLGALELGRWIHSY 141
W I G A+ LF M+ + V ++ L +C+ LG LG +H+
Sbjct: 16 WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75
Query: 142 MGKHRIDLNHIVGGALINMYSR--CGDIDKA-----------------LQVFEEMKERDV 182
+ + AL+N+Y + C +D +VF+EM ERDV
Sbjct: 76 AIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDV 135
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
++N+L+ G A GR EA+ R+M +G RP T VL + V G E+
Sbjct: 136 VSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGF 195
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
R+ G + + ++D+ + R + + N+ + DHI+ SLL+ C +G ++
Sbjct: 196 AFRN-GFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVR-DHILWNSLLAGCAQNGSVE 253
Query: 303 LGEQIAKRLL 312
I +R+L
Sbjct: 254 EALGIFRRML 263
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/491 (38%), Positives = 302/491 (61%), Gaps = 5/491 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GRE+HG +L+ + N LV +Y K A +FD M D+V+ VM+ Y
Sbjct: 195 GREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYH-RDIVSWNVMLTAYF 253
Query: 62 EHGLVENAFEVFSRVKVK----DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ E +F +++ + + W A I G ++NG+ AL + +MQ ++PN +
Sbjct: 254 LNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRI 313
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
TIV L C+ L +L G+ IH Y+ +H + + AL+ +Y++CGD++ + VF M
Sbjct: 314 TIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTM 373
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
+DV +N++I +MHG+ E++ +F +M++ G+ P VTF+GVL+ CSH L D G
Sbjct: 374 PRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGL 433
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
+F SM+ ++ I P +HY C+VD+LSR GR EEAYDFI M I P G+LL AC++
Sbjct: 434 LVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGACRV 493
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
+ ++LG A +L + ++G YVLLSN ++ KW EA +IR M++ G+ K PG S
Sbjct: 494 YKNVELGTLAASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPGRS 553
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
++V N+++ F+ GD + Q++ IY+ + E+ + ++L+GY P+T+ VL +++ ++E L
Sbjct: 554 WVQVKNKVYSFVTGDKSNEQKDMIYRFLDEIDEKMRLDGYQPNTDFVLQNVDQEQREETL 613
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSERLA+ +G++++ TT+RV KNLR+C DCH+ IKLIA I +IIVRD RFHHF
Sbjct: 614 CSHSERLAVAFGILNSSGKTTVRVFKNLRICGDCHNAIKLIAKIVGMQIIVRDSLRFHHF 673
Query: 478 ENGTCSCGDYW 488
+G C+C D+W
Sbjct: 674 RDGYCTCNDFW 684
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 127/252 (50%), Gaps = 6/252 (2%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPEC---NDVVASTVMINCY 60
+I+ +L +R ++ L + + G+ A ++ D+ + D+V +I+ +
Sbjct: 63 DIYSTLLSRNVRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMF 122
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ V A VF + VKD V WT+M V G + + LFREM + +R N +T+
Sbjct: 123 GKCKFVNGARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVS 182
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L AC+ ++LGR +H ++ ++ ++ N V AL+NMY+ + +A VF+ M R
Sbjct: 183 SILPACADY--IKLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHR 240
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D+ ++N ++ ++ + +F +M +GI+ + ++ ++ C G +L I
Sbjct: 241 DIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGIL 300
Query: 241 QSMTRDYGIEPQ 252
M +D GI+P
Sbjct: 301 CKM-QDSGIKPN 311
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 163/345 (47%), Gaps = 20/345 (5%)
Query: 40 LFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMAR 99
+ ++P S +I + G ++ A +F ++ D WT +I G ++G +
Sbjct: 1 MVSKLPANLQPCQSIKLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKK 60
Query: 100 ALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALIN 159
A+D++ + NVRP++ ++ V AC+ G L + + IH + + + ++G ALI+
Sbjct: 61 AIDIYSTLLSRNVRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALID 120
Query: 160 MYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVT 219
M+ +C ++ A VF++M +DV ++ S+ G + + +FREM GIR +T
Sbjct: 121 MFGKCKFVNGARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLT 180
Query: 220 FVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL-SRVGRPEE--AYDFI 276
+L AC+ + LG E+ + R+ +E + +V++ S +G + +D +
Sbjct: 181 VSSILPACAD--YIKLGREVHGFILRNE-MEGNVYVSSALVNMYASSLGLKQARLVFDSM 237
Query: 277 TNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWK 336
+ I ++ML + + L L Q+ K + A + + +G+ +
Sbjct: 238 YHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAI---SGCMQNGQHE 294
Query: 337 EAVQIRAKMKEAGVQKE--------PGCSSIEV---NNEIHEFIL 370
A+ I KM+++G++ PGC+++E EIH ++
Sbjct: 295 LALGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVF 339
>gi|357141422|ref|XP_003572219.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Brachypodium distachyon]
Length = 571
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/452 (42%), Positives = 283/452 (62%), Gaps = 6/452 (1%)
Query: 39 QLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKV--KDTVCWTAMIDGLVRNGE 96
LF E D S M++ Y G + A EVF R +D W +++ + G
Sbjct: 124 SLFRRGLESRDRFISASMLSFYAAAGDLPAAREVFDRSPPNQRDLALWNSLLHAYLSQGL 183
Query: 97 MARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGA 156
L LFR+M V +EVT++ V+SACS LGAL+ GRW H+Y + + +G A
Sbjct: 184 YTHVLRLFRQM----VATDEVTLLAVVSACSHLGALDTGRWAHAYHARTCRNTTRNLGTA 239
Query: 157 LINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPT 216
L+NMY RCGD++ A VF EM ++DV T++ +IAGLA++G +A+++F EM N G+ P
Sbjct: 240 LLNMYMRCGDVESAWSVFHEMLDKDVRTWSVMIAGLAVNGLPRDALKLFAEMKNIGVDPD 299
Query: 217 KVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFI 276
+T VL+ACSH G+VD G M +Y ++P IEHYGC+VDLL R G+ EEA I
Sbjct: 300 SITMTAVLSACSHAGMVDEGKMFLHCMPIEYHLQPTIEHYGCVVDLLGRAGQLEEALALI 359
Query: 277 TNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWK 336
+ D + G+LL AC+ H + +G+ A +L +G V LSNAYA++GKW
Sbjct: 360 ETVPFKADVALWGALLVACRAHKNVDMGQMAAMEILKLDPHHAGACVFLSNAYAAAGKWD 419
Query: 337 EAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEG 396
++R+ MKE + K PG S +E++ ++EF+ GD HPQ ++IY + E+ + + L+G
Sbjct: 420 LVQEVRSSMKEHRIYKPPGSSIVELDGVVYEFLSGDHSHPQSDRIYAMLDEVCKTLSLKG 479
Query: 397 YSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIK 456
+ PST+ V DI++ +KE ++ HSE+LA+ GLIST+ IR+VKNLR+C DCHS++K
Sbjct: 480 HRPSTKEVAFDIDEEDKEVCISQHSEKLALALGLISTRRGAVIRIVKNLRICEDCHSVMK 539
Query: 457 LIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
+++ + R I+VRDRNRFHHF+NG+CSC DYW
Sbjct: 540 IVSEVYDRVIVVRDRNRFHHFKNGSCSCLDYW 571
>gi|195609728|gb|ACG26694.1| pentatricopeptide repeat protein PPR986-12 [Zea mays]
Length = 551
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/454 (44%), Positives = 284/454 (62%), Gaps = 16/454 (3%)
Query: 50 VVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
V + +++ Y G A VF RV + V W +D L NG+ ALDLFREMQR
Sbjct: 99 TVVANSLVHFYASCGRPGAALAVFRRVPDRSLVSWNTAVDALAGNGDHLAALDLFREMQR 158
Query: 110 D--NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH--------IVGGALIN 159
D ++ P+ T+ VL AC+ GAL LG + H+ + + H ++ +L++
Sbjct: 159 DRPDLAPDAYTVQSVLGACAATGALSLGLYAHALLLRELGGAGHASPVSRDVLINNSLVD 218
Query: 160 MYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN-QGIRPTKV 218
+Y +CG ++ A QVF+ M ERD+ ++N+++ LA HGR +++++F M +G+ P +
Sbjct: 219 LYGKCGAVELARQVFDRMSERDLASWNAMVLALANHGRVQDSLDLFDRMTRVEGLVPNAI 278
Query: 219 TFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITN 278
TFV VL+AC+HGGLVD G F +M D+GI P+IEHYGC+VD+L+R G EEA D +
Sbjct: 279 TFVAVLSACNHGGLVDEGRRYFAAMVSDHGIRPRIEHYGCMVDILARAGFIEEALDVVAG 338
Query: 279 MKIAPDHIMLGSLLSAC-KIHGKLQLGEQIAKRLLDCRS-ADSGTYVLLSNAYASSGKWK 336
M PD I+ SLL AC K + L+L E +AK LD A SG YVLLS YAS+ +W
Sbjct: 339 MNCRPDSIIWRSLLDACCKRNAGLELSEAMAKLALDVPDDAVSGVYVLLSRVYASAQRWN 398
Query: 337 EAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEG 396
+ IR M + G +KEPG SSIE++ +H+F+ GD HPQ E+IY K+ E++Q + G
Sbjct: 399 DVGMIRQLMSQEGFKKEPGFSSIEMDGSVHQFVAGDTSHPQSEEIYVKLDEIQQRLTSAG 458
Query: 397 YSP--STEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSM 454
Y P S ++ DI D K L +HSERLAI +GL++ P IR++KNLRVC DCH++
Sbjct: 459 YKPDLSEAPMVADI-DRTKGATLRLHSERLAISFGLLNATPGAPIRILKNLRVCKDCHTI 517
Query: 455 IKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
KLI+ + +IIVRDR RFHHF++G+CSC DYW
Sbjct: 518 SKLISKLYNVEIIVRDRIRFHHFKDGSCSCKDYW 551
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 82/150 (54%), Gaps = 7/150 (4%)
Query: 45 PECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLF 104
P DV+ + +++ Y + G VE A +VF R+ +D W AM+ L +G + +LDLF
Sbjct: 205 PVSRDVLINNSLVDLYGKCGAVELARQVFDRMSERDLASWNAMVLALANHGRVQDSLDLF 264
Query: 105 REMQR-DNVRPNEVTIVCVLSACSQLGALELG-RWIHSYMGKH--RIDLNHIVGGALINM 160
M R + + PN +T V VLSAC+ G ++ G R+ + + H R + H G ++++
Sbjct: 265 DRMTRVEGLVPNAITFVAVLSACNHGGLVDEGRRYFAAMVSDHGIRPRIEHY--GCMVDI 322
Query: 161 YSRCGDIDKALQVFEEMKER-DVTTYNSLI 189
+R G I++AL V M R D + SL+
Sbjct: 323 LARAGFIEEALDVVAGMNCRPDSIIWRSLL 352
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 14/225 (6%)
Query: 99 RALDLFREMQ-RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH-IVGGA 156
RAL LFR + + P ++ LSA + L AL GR +H+ K + H +V +
Sbjct: 45 RALLLFRTLHASPSPPPPRYSLPAALSAAAFLAALPEGRQLHALAAKLALAPAHTVVANS 104
Query: 157 LINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ--GIR 214
L++ Y+ CG AL VF + +R + ++N+ + LA +G + A+++FREM +
Sbjct: 105 LVHFYASCGRPGAALAVFRRVPDRSLVSWNTAVDALAGNGDHLAALDLFREMQRDRPDLA 164
Query: 215 PTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYG-------IEPQIEHYGCIVDLLSRVG 267
P T VL AC+ G + LG + R+ G + + +VDL + G
Sbjct: 165 PDAYTVQSVLGACAATGALSLGLYAHALLLRELGGAGHASPVSRDVLINNSLVDLYGKCG 224
Query: 268 RPE---EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAK 309
E + +D ++ +A + M+ +L + ++ L L +++ +
Sbjct: 225 AVELARQVFDRMSERDLASWNAMVLALANHGRVQDSLDLFDRMTR 269
>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/489 (39%), Positives = 295/489 (60%), Gaps = 33/489 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG ++H +LKLGL ++ + L+ +YGKCGE + + C
Sbjct: 106 EGMQVHAHILKLGLENDVFVQNSLISMYGKCGE---------------------IGVCC- 143
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV-RPNEVTI 119
VF ++ + W+A+I G + L L +M + R E +
Sbjct: 144 ----------AVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESIL 193
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V VLSAC+ LGAL+LGR +H ++ ++ LN IV +LI MY +CG + K + +F++M +
Sbjct: 194 VSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGXLYKGMCLFQKMAK 253
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
++ +Y+ +I+GLAMHG E + +F EM+ QG+ P + +VGVLNACSH GLV G +
Sbjct: 254 KNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQC 313
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F M ++GIEP I+HYGC+VDL+ R G+ +EA + I +M + P+ ++ SLLSA K+H
Sbjct: 314 FNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVHN 373
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
LQ GE AK+L S + YV+LSN YA + +W++ + R M G+ + PG S +
Sbjct: 374 NLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVARTRTNMFSKGLSQRPGFSLV 433
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
EV ++H F+ D HPQ E +Y+ + +++ +K EGY P T VL D+++ EK+ L+
Sbjct: 434 EVKRKMHRFVSQDAGHPQSESVYEMLYQMEWQLKFEGYXPDTTQVLCDVDEEEKKQRLSG 493
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HS++LAI Y LI T + +R+V+NLR+CNDCH+ KLI+ I R+I VRDR+RFHHF++
Sbjct: 494 HSQKLAIAYALIHTSQGSPVRIVRNLRMCNDCHTYTKLISIIFDREITVRDRHRFHHFKD 553
Query: 480 GTCSCGDYW 488
G CSC DYW
Sbjct: 554 GACSCRDYW 562
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 194/424 (45%), Gaps = 29/424 (6%)
Query: 48 NDVVASTVMINCYV-EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
+ AS ++ C + + G ++ A +F ++ + + M+ G V++ AL ++E
Sbjct: 19 DSFCASNLVATCALSDWGSMDYACSIFRQMDEPGSFZFNTMMRGHVKDMNTEEALITYKE 78
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M V+P+ T +L AC++L A+E G +H+++ K ++ + V +LI+MY +CG+
Sbjct: 79 MAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLENDVFVQNSLISMYGKCGE 138
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGI-RPTKVTFVGVLN 225
I VFE+M ER V ++++LI A G + + + +M N+G R + V VL+
Sbjct: 139 IGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESILVSVLS 198
Query: 226 ACSHGGLVDLGFEIFQSMTRDY-GIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPD 284
AC+H G +DLG + + R+ G+ +E ++++ + G + M +
Sbjct: 199 ACTHLGALDLGRSVHGFLLRNVSGLNVIVE--TSLIEMYLKCGXLYKGMCLFQKMA-KKN 255
Query: 285 HIMLGSLLSACKIHGKLQLGEQIAKRLLD-CRSADSGTYVLLSNAYASSGKWKEAVQIRA 343
+ ++S +HG + G +I +L+ D YV + NA + +G +E +Q
Sbjct: 256 KLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFN 315
Query: 344 KMK-EAGVQ---KEPGCSSIEVN-----NEIHEFILGDIRHPQ---------REQIYKKM 385
+MK E G++ + GC + +E E I P +++ +
Sbjct: 316 RMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNL 375
Query: 386 Q----ELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRV 441
Q KQ+ KL+ S VVL ++ + W + GL ++ + V
Sbjct: 376 QAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVARTRTNMFSKGLSQRPGFSLVEV 435
Query: 442 VKNL 445
+ +
Sbjct: 436 KRKM 439
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/487 (41%), Positives = 287/487 (58%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
REIH QV G ++ LV +Y KCG KDA Q+FD MP DVV+ + MI YV
Sbjct: 379 AREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPR-RDVVSWSAMIGAYV 437
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
E+G AFE F M+R N+ P+ VT +
Sbjct: 438 ENGYGTEAFET-------------------------------FHLMKRSNIEPDGVTYIN 466
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+AC LGAL++G I++ K + + +G ALI M ++ G +++A +F+ M RD
Sbjct: 467 LLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRD 526
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V T+N++I G ++HG + EA+ +F M+ + RP VTFVGVL+ACS G VD G F
Sbjct: 527 VITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFT 586
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+ GI P ++ YGC+VDLL R G +EA I +M + P + SLL AC+IHG L
Sbjct: 587 YLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNL 646
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+ E+ A+R L D YV LS+ YA++G W+ ++R M+ G++KE GC+ IEV
Sbjct: 647 DVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEV 706
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
++H F++ D HP +IY ++ L +K EGY P T+ VLHD+ + +KE A++ HS
Sbjct: 707 AGKVHTFVVEDRSHPLVGEIYAELARLMNAIKREGYIPITQNVLHDVGEQQKEEAISYHS 766
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI YG++S T IR+ KNLRVC+DCHS K I+ +T R+II RD +RFHHF++G
Sbjct: 767 EKLAIAYGVLSLPSGTPIRIYKNLRVCSDCHSASKFISKVTGREIIARDASRFHHFKDGV 826
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 827 CSCGDYW 833
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 153/288 (53%), Gaps = 5/288 (1%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D+ +T +I Y G +E A VF +KV+D V WT MI+G NG + A LF M
Sbjct: 292 DDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATM 351
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
Q + ++P+ +T + +++AC+ L R IHS + + +V AL++MY++CG I
Sbjct: 352 QEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAI 411
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A QVF+ M RDV +++++I +G EA E F M I P VT++ +LNAC
Sbjct: 412 KDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNAC 471
Query: 228 SHGGLVDLGFEIF-QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
H G +D+G EI+ Q++ D + + ++ + ++ G E A +I + + D I
Sbjct: 472 GHLGALDVGMEIYTQAIKAD--LVSHVPLGNALIIMNAKHGSVERA-RYIFDTMVRRDVI 528
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNAYASSG 333
+++ +HG + + R+L R +S T+V + +A + +G
Sbjct: 529 TWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAG 576
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 173/379 (45%), Gaps = 48/379 (12%)
Query: 11 KLGLRSNRSTRLKLVELYGKCGEFKDAM---QLFDEMPECN---DVVASTVMINCYVEHG 64
+LG N V+L+ +C E +DA Q+ D + + ++ +I Y G
Sbjct: 47 RLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICG 106
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
V A ++F V+ K V W A+I G + G + A LFR+M + + P+ +T + VL
Sbjct: 107 NVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLD 166
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
ACS L G+ +H+ + + +G AL++MY + G +D A QVF+ + RDV+T
Sbjct: 167 ACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVST 226
Query: 185 YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA----------------CS 228
+N ++ G A G +A E+F M G++P K++F+ +L+ C
Sbjct: 227 FNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCM 286
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIE---------------HYGCIVDLLSRVGRPEEAY 273
+ GLVD + S+ R Y IE + +++ + G E+A+
Sbjct: 287 NAGLVD-DIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAF 345
Query: 274 DFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNA-- 328
M+ I PD I +++AC I L +I ++ A GT +L+S A
Sbjct: 346 GLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQV---DIAGFGTDLLVSTALV 402
Query: 329 --YASSGKWKEAVQIRAKM 345
YA G K+A Q+ M
Sbjct: 403 HMYAKCGAIKDARQVFDAM 421
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 159/365 (43%), Gaps = 78/365 (21%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+E+H QV+ G S+ LV +Y K G DA Q+FD + DV VM+ Y
Sbjct: 177 GKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGL-HIRDVSTFNVMVGGYA 235
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G E AFE+F R MQ+ ++PN+++ +
Sbjct: 236 KSGDWEKAFELFYR-------------------------------MQQVGLKPNKISFLS 264
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L C AL G+ +H+ + + V +LI MY+ CG I+ A +VF+ MK RD
Sbjct: 265 ILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRD 324
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HG 230
V ++ +I G A +G +A +F M +GI+P ++T++ ++NAC+ H
Sbjct: 325 VVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHS 384
Query: 231 GLVDLGF------------------------EIFQSMTRDYGIEPQIEHYGCIVDLLSRV 266
+ GF ++F +M R + + ++
Sbjct: 385 QVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRR-----DVVSWSAMIGAYVEN 439
Query: 267 GRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV 323
G EA++ MK I PD + +LL+AC G L +G +I + + AD ++V
Sbjct: 440 GYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAI---KADLVSHV 496
Query: 324 LLSNA 328
L NA
Sbjct: 497 PLGNA 501
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 115/234 (49%), Gaps = 36/234 (15%)
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T V + C++L LG+ + ++ + LN LI +YS CG++ +A Q+F+ +
Sbjct: 59 TYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSV 118
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
+ + V T+N+LIAG A G EA +FR+M+++G+ P+ +TF+ VL+ACS ++ G
Sbjct: 119 ENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGK 178
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
E+ Q+ G + D R+G + ++ GS+ A ++
Sbjct: 179 EV----------HAQVVTAGFVSDF--RIG-----------TALVSMYVKGGSMDDARQV 215
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
L + D T+ ++ YA SG W++A ++ +M++ G++
Sbjct: 216 FDGLHI-------------RDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLK 256
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/441 (42%), Positives = 280/441 (63%), Gaps = 2/441 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D + T +++ Y + G +++A +VF + +D W A+I G + + AL LF+ M+
Sbjct: 139 DALLGTTLLDVYAKVGEIDSAEKVFDEMVKRDIASWNALISGFAQGSKPTEALSLFKRME 198
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
D +PNE++++ LSAC+QLG + G IH Y+ R D+N V +I+MY++CG +D
Sbjct: 199 IDGFKPNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDMNAQVCNVVIDMYAKCGFVD 258
Query: 169 KALQVFEEMK-ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
KA VFE M +D+ T+N++I AMHG +A+E+F +M G+ P V+++ VL AC
Sbjct: 259 KAYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMDQSGVSPDDVSYLAVLCAC 318
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
+HGGLV+ GF +F SM + G++P ++HYG +VDLL R GR EAYD + +M PD ++
Sbjct: 319 NHGGLVEEGFRLFNSM-ENCGVKPNVKHYGSVVDLLGRAGRLHEAYDIVNSMPTVPDIVL 377
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+LL A + H +++ E ++++L++ S G +VLLSN YA+ +W + ++R MK
Sbjct: 378 WQTLLGASRTHRNVEIAETVSRKLVEMGSNHCGDFVLLSNVYAARERWADVGRVREAMKN 437
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
V+K PG S IE N IH+F D H +IY K+ E++ VK GY T VLHD
Sbjct: 438 RDVKKVPGLSYIEGNGVIHKFYNADKSHESWREIYAKLDEIRFRVKEYGYVAETSFVLHD 497
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
I + +KE L HSE+LA+ +GLIST T I+V+KNLR+C DCH +IKLI+ I R+II
Sbjct: 498 IGEEDKENVLGHHSEKLAVAFGLISTSEGTPIQVIKNLRICGDCHFVIKLISKIYDREII 557
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
VRDR RFH F+ G CSC DYW
Sbjct: 558 VRDRVRFHRFKEGFCSCRDYW 578
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 154/293 (52%), Gaps = 10/293 (3%)
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
G + A FS+++ T W A+I G +++ A ++ M + + + +T VL
Sbjct: 53 GNLSFAILTFSQIRTPSTNDWNAIIRGFIQSPNPTNAFAWYKSMISKSRKVDALTCSFVL 112
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
AC+++ A IH+++ + + ++G L+++Y++ G+ID A +VF+EM +RD+
Sbjct: 113 KACARVLARLESIQIHTHIVRKGFIADALLGTTLLDVYAKVGEIDSAEKVFDEMVKRDIA 172
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
++N+LI+G A + EA+ +F+ M G +P +++ +G L+AC+ G G +I +
Sbjct: 173 SWNALISGFAQGSKPTEALSLFKRMEIDGFKPNEISVLGALSACAQLGDFKEGEKIHGYI 232
Query: 244 TRD-YGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK-- 300
+ + + Q+ ++D+ ++ G ++AY +M D + +++ A +HG+
Sbjct: 233 KVERFDMNAQV--CNVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMIMAFAMHGEGC 290
Query: 301 --LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
L+L E++ + + S D +Y+ + A G +E ++ M+ GV+
Sbjct: 291 KALELFEKMDQSGV---SPDDVSYLAVLCACNHGGLVEEGFRLFNSMENCGVK 340
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 34/214 (15%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG +IHG + N ++++Y KCG A +F+ M D+V MI +
Sbjct: 224 EGEKIHGYIKVERFDMNAQVCNVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMIMAF 283
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
H GE +AL+LF +M + V P++V+ +
Sbjct: 284 AMH-------------------------------GEGCKALELFEKMDQSGVSPDDVSYL 312
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE- 179
VL AC+ G +E G + + M + N G+++++ R G + +A + M
Sbjct: 313 AVLCACNHGGLVEEGFRLFNSMENCGVKPNVKHYGSVVDLLGRAGRLHEAYDIVNSMPTV 372
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMF-REMINQG 212
D+ + +L+ H R++E E R+++ G
Sbjct: 373 PDIVLWQTLLGASRTH-RNVEIAETVSRKLVEMG 405
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/469 (40%), Positives = 282/469 (60%), Gaps = 34/469 (7%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
L+++Y KC FK A +FD++P ++ ++ V
Sbjct: 414 LIDMYSKCRSFKAARSIFDDIP------------------------------LEERNVVT 443
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRD--NVRPNEVTIVCVLSACSQLGALELGRWIHSY 141
WT MI G + G+ AL LF EM + V PN TI C+L AC+ L A+ +G+ IH+Y
Sbjct: 444 WTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAY 503
Query: 142 MGKH-RIDLN-HIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSI 199
+ +H + D + + V LINMYS+CGD+D A VF+ M ++ ++ S++ G MHGR
Sbjct: 504 VLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGS 563
Query: 200 EAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI 259
EA+++F +M G P +TF+ VL ACSH G+VD G F SM+ DYG+ P+ EHY
Sbjct: 564 EALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYA 623
Query: 260 VDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADS 319
+DLL+R GR ++A+ + +M + P ++ +LLSAC++H ++L E +L++ + +
Sbjct: 624 IDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAEND 683
Query: 320 GTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQRE 379
G+Y L+SN YA++G+WK+ +IR MK++G++K PGCS ++ F +GD HP
Sbjct: 684 GSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSP 743
Query: 380 QIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTI 439
QIY ++ L +K GY P T LHD+++ EK L HSE+LA+ YGL++T P I
Sbjct: 744 QIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPI 803
Query: 440 RVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
R+ KNLRVC DCHS I+ I +I+VRD +RFHHF+NG+CSCG YW
Sbjct: 804 RITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 852
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 171/319 (53%), Gaps = 21/319 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+ +E+HG ++ G + L++ Y KCG ++A+++F+ M E DVV+ M+ Y
Sbjct: 245 QTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMM-EFKDVVSWNAMVAGY 303
Query: 61 VEHGLVENAFEVFSRVKVK----DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
+ G + AFE+F ++ + D V WTA+I G + G AL++FR+M PN
Sbjct: 304 SQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNC 363
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKH-RIDLNHIVGG---------ALINMYSRCGD 166
VTI+ VLSAC+ LGA G IH+Y K+ + L++ GG ALI+MYS+C
Sbjct: 364 VTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRS 423
Query: 167 IDKALQVFEE--MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ--GIRPTKVTFVG 222
A +F++ ++ER+V T+ +I G A +G S +A+++F EMI++ G+ P T
Sbjct: 424 FKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISC 483
Query: 223 VLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYG-CIVDLLSRVGRPEEAYDFITNMKI 281
+L AC+H + +G +I + R + + C++++ S+ G + A +M
Sbjct: 484 ILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMS- 542
Query: 282 APDHIMLGSLLSACKIHGK 300
I S+++ +HG+
Sbjct: 543 QKSAISWTSMMTGYGMHGR 561
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 171/437 (39%), Gaps = 120/437 (27%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G HG + G SN LV +Y +CG ++A +FDE+
Sbjct: 136 GSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEI----------------- 178
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM------QRDNVRPN 115
++ + D + W +++ V++ ALDLF +M + N R +
Sbjct: 179 ------------TQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 226
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
++IV +L AC L A+ + +H ++ L+ VG ALI+ Y++CG ++ A++VF
Sbjct: 227 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFN 286
Query: 176 EMKERDVTTYNSLIAGLAMHGR-----------------------------------SIE 200
M+ +DV ++N+++AG + G S E
Sbjct: 287 MMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHE 346
Query: 201 AVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI--------FQSMTRDYGIEPQ 252
A+ +FR+MI G P VT + VL+AC+ G G EI ++ D+G E +
Sbjct: 347 ALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDE 406
Query: 253 -IEHYGCIVDLLSR---------------------------------VGRPEEAYDFITN 278
+ Y ++D+ S+ G +A
Sbjct: 407 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 466
Query: 279 M-----KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVL---LSNAYA 330
M +AP+ + +L AC +++G+QI +L DS Y + L N Y+
Sbjct: 467 MISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYS 526
Query: 331 SSGKWKEAVQIRAKMKE 347
G A + M +
Sbjct: 527 KCGDVDTARHVFDSMSQ 543
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 142/316 (44%), Gaps = 14/316 (4%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
T ++ Y+ G + A V RV V W +I ++ G + A+++ M R R
Sbjct: 55 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 114
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
+ T+ VL AC +L + G H + + + N + AL+ MYSRCG +++A +
Sbjct: 115 LDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 174
Query: 174 FEEMKER---DVTTYNSLIAGLAMHGRSIEAVEMFREM-INQGIRPTK-----VTFVGVL 224
F+E+ +R DV ++NS+++ + A+++F +M + +PT ++ V +L
Sbjct: 175 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL 234
Query: 225 NACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPD 284
AC V E+ + R+ G + ++D ++ G E A + NM D
Sbjct: 235 PACGSLKAVPQTKEVHGNAIRN-GTFLDVFVGNALIDAYAKCGLMENAVK-VFNMMEFKD 292
Query: 285 HIMLGSLLSACKIHGKLQLGEQIAKRLL-DCRSADSGTYVLLSNAYASSGKWKEAVQIRA 343
+ ++++ G + ++ K + + D T+ + Y+ G EA+ +
Sbjct: 293 VVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFR 352
Query: 344 KMKEAGVQKEPGCSSI 359
+M +G P C +I
Sbjct: 353 QMIFSG--SLPNCVTI 366
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 58/145 (40%), Gaps = 5/145 (3%)
Query: 153 VGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG 212
+G ++ Y CG D AL V E + +N LI GR A+ + M+ G
Sbjct: 53 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 112
Query: 213 IRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
R T VL AC G F + G E + +V + SR G EEA
Sbjct: 113 TRLDHFTLPHVLKACGELPSYRCG-SAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 171
Query: 273 ---YDFITNMKIAPDHIMLGSLLSA 294
+D IT I D I S++SA
Sbjct: 172 SMIFDEITQRGI-DDVISWNSIVSA 195
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/442 (43%), Positives = 282/442 (63%), Gaps = 1/442 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
N T + + Y + G A ++F + KD V W+AM+ G + G++ A+ +F ++
Sbjct: 425 NSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQL 484
Query: 108 QRDNVRPNEVTIVCVLSACSQ-LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
++ V PNE T VL+AC+ ++E G+ HS K V AL+ MY++ G+
Sbjct: 485 AKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGN 544
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
I+ A +VF+ +RD+ ++NS+I+G A HG +++++F EM ++ + +TF+GV++A
Sbjct: 545 IESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISA 604
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
C+H GLV+ G F M +DY I P +EHY C+VDL SR G E+A D I M
Sbjct: 605 CTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGAT 664
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
+ +LL+AC++H +QLGE A++L+ + DS YVLLSN YA++G W+E ++R M
Sbjct: 665 IWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMD 724
Query: 347 EAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH 406
V+KE G S IEV N+ F+ GD+ HPQ ++IY K++EL +K GY P T+ VLH
Sbjct: 725 MKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLH 784
Query: 407 DIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKI 466
D+E+ KE L+ HSERLAI +GLI+T P T I++VKNLRVC DCH++IKLI+ I R I
Sbjct: 785 DVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDI 844
Query: 467 IVRDRNRFHHFENGTCSCGDYW 488
+VRD NRFHHF+ G+CSCGDYW
Sbjct: 845 VVRDSNRFHHFKGGSCSCGDYW 866
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 158/331 (47%), Gaps = 45/331 (13%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV T +++ Y++ VE+ VF ++VK+ V WT+++ G +NG +AL LF +MQ
Sbjct: 126 DVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQ 185
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ ++PN T VL + GA+E G +H+ + K +D VG +++NMYS+ +
Sbjct: 186 LEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVS 245
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A VF+ M+ R+ ++NS+IAG +G +EA E+F M +G++ T+ F V+ C+
Sbjct: 246 DAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCA 305
Query: 229 -----------------HGGLVDL------------------GFEIFQSMTRDYGIEPQI 253
+G DL F++F M +G++ +
Sbjct: 306 NIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMM---HGVQ-NV 361
Query: 254 EHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKR 310
+ I+ + GR + A + M+ + P+H ++L+A Q+ + K
Sbjct: 362 VSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSPSQIHALVVKT 421
Query: 311 LLDCRSADSGTYVLLSNAYASSGKWKEAVQI 341
+ S GT LS++Y+ G EA +I
Sbjct: 422 NYE-NSPSVGT--ALSDSYSKIGDANEAAKI 449
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 150/299 (50%), Gaps = 38/299 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
+++H QV+K G + + + L+ Y KC E DA +LF M
Sbjct: 313 AKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMM----------------- 355
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG V++ V WTA+I G V+NG RA++LF +M+R+ VRPN T
Sbjct: 356 -HG-------------VQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYST 401
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+A + + + IH+ + K + + VG AL + YS+ GD ++A ++FE + E+D
Sbjct: 402 ILTANAAVSPSQ----IHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKD 457
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH-GGLVDLGFEIF 240
+ ++++++G A G AV++F ++ +G+ P + TF VLNAC+ V+ G + F
Sbjct: 458 IVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQ-F 516
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
S + G + +V + ++ G E A + + ++ D + S++S HG
Sbjct: 517 HSCSIKSGFSNALCVSSALVTMYAKRGNIESANE-VFKRQVDRDLVSWNSMISGYAQHG 574
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 126/258 (48%), Gaps = 9/258 (3%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
M+N Y + +V +A VF ++ ++ V W +MI G V NG A +LF M+ + V+
Sbjct: 234 MVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLT 293
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
+ V+ C+ + + + +H + K+ D + + AL+ YS+C +ID A ++F
Sbjct: 294 QTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFC 353
Query: 176 EMKE-RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
M ++V ++ ++I+G +GR+ A+ +F +M +G+RP T+ +L A +
Sbjct: 354 MMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSPSQ 413
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSL 291
+ + ++ +Y P + + D S++G EA ++ I I ML
Sbjct: 414 IHALVVKT---NYENSPSVG--TALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGY 468
Query: 292 LSACKIHGKLQLGEQIAK 309
I G +++ Q+AK
Sbjct: 469 AQMGDIEGAVKIFLQLAK 486
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 104/204 (50%), Gaps = 4/204 (1%)
Query: 93 RNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHI 152
RN + AL+LF ++R + ++ CVL C L +G+ +H K +
Sbjct: 69 RNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVS 128
Query: 153 VGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG 212
VG +L++MY + ++ +VF+EM+ ++V ++ SL+AG +G + +A+++F +M +G
Sbjct: 129 VGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEG 188
Query: 213 IRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSR---VGRP 269
I+P TF VL + G V+ G ++ +M G++ I +V++ S+ V
Sbjct: 189 IKPNPFTFAAVLGGLAADGAVEKGVQV-HTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDA 247
Query: 270 EEAYDFITNMKIAPDHIMLGSLLS 293
+ +D + N + M+ ++
Sbjct: 248 KAVFDSMENRNAVSWNSMIAGFVT 271
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/441 (43%), Positives = 290/441 (65%), Gaps = 2/441 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
++ S +IN Y + G + +A +VF + +KD V W +I G +NG + A++++ M+
Sbjct: 129 ELFVSNALINMYAKFGSLGHAQKVFGLL-IKDVVSWNTLITGYAQNGLASEAIEVYLLME 187
Query: 109 R-DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ + PN+ T V +L A S +GAL+ G IH + K+ + + VG LI+MY +CG +
Sbjct: 188 EHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKL 247
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
D A+ +F ++ ++ +N++I+ +HG +A+E+FREM + ++P +TFV +L+AC
Sbjct: 248 DDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSAC 307
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SH GLV F M +YGI+P ++HYGC+VDL R G E A++FI M I PD
Sbjct: 308 SHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQPDASA 367
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
G+LL+AC+IHG ++LG+ ++RL + S + G YVLLSN YA+ GKW+ +R+ ++
Sbjct: 368 WGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGVDDVRSLARD 427
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
G++K PG SSI +NN++ F G+ HP+ E+IY+++++L +K GY P VL D
Sbjct: 428 RGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIKTIGYVPDFCFVLQD 487
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
+E+ EKE L HSERLAI YG+IST P T IR+ KNLRVC DCH++ K I+ IT+R+II
Sbjct: 488 VEEDEKEHILMGHSERLAIAYGIISTSPKTPIRIFKNLRVCGDCHTVTKFISIITEREII 547
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
VRD +RFHHF+ GTCSCGDYW
Sbjct: 548 VRDSSRFHHFKGGTCSCGDYW 568
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 144/286 (50%), Gaps = 37/286 (12%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV + +++ Y GLV +A ++F + +D W AMI G +NG A ALD+ EM+
Sbjct: 28 DVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMISGYCQNGNAAEALDIADEMR 87
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ V+ + +T+ VL C+Q+G + G+ IH Y+ KH ++ V ALINMY++ G +
Sbjct: 88 LEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGSLG 147
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM-INQGIRPTKVTFVGVLNAC 227
A +VF + +DV ++N+LI G A +G + EA+E++ M ++ I P + T+V +L A
Sbjct: 148 HAQKVFGLLI-KDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAY 206
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGR------------------- 268
SH G + G I + ++ + + C++D+ + G+
Sbjct: 207 SHVGALQQGMRIHGQVIKNC-LYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPW 265
Query: 269 ------------PEEAYDFITNMK---IAPDHIMLGSLLSACKIHG 299
E+A + MK + PDHI SLLSAC G
Sbjct: 266 NAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSACSHSG 311
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 38/200 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G IHGQV+K L S+ L+++YGKCG+ DA+ LF ++P N V MI+CY
Sbjct: 214 QGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNS-VPWNAMISCY 272
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG +GE +AL+LFREM+ + V+P+ +T V
Sbjct: 273 GVHG-----------------------------DGE--KALELFREMKAERVKPDHITFV 301
Query: 121 CVLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+LSACS G + +W + M + + L H G +++++ R G+++ A ++M
Sbjct: 302 SLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHY--GCMVDLFGRAGELEMAFNFIKKM 359
Query: 178 K-ERDVTTYNSLIAGLAMHG 196
+ D + + +L+ +HG
Sbjct: 360 PIQPDASAWGALLNACRIHG 379
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 115/254 (45%), Gaps = 37/254 (14%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V+ AC G L G+ IH + K + + V +L++MYSR G + A ++F++M RD
Sbjct: 3 VVKAC---GDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARD 59
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV-------- 233
++N++I+G +G + EA+++ EM +G++ +T VL C+ G +
Sbjct: 60 RGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHL 119
Query: 234 -----DLGFEIFQS-----MTRDYG-----------IEPQIEHYGCIVDLLSRVGRPEEA 272
L FE+F S M +G + + + ++ ++ G EA
Sbjct: 120 YVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLIKDVVSWNTLITGYAQNGLASEA 179
Query: 273 YDFITNM----KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL-DCRSADSGTYVLLSN 327
+ M +I P+ S+L A G LQ G +I +++ +C +D L +
Sbjct: 180 IEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLID 239
Query: 328 AYASSGKWKEAVQI 341
Y GK +A+ +
Sbjct: 240 MYGKCGKLDDAISL 253
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/523 (37%), Positives = 315/523 (60%), Gaps = 37/523 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEM----------------- 44
G++IHG+++ L N L +LY +CGE A +LFD M
Sbjct: 174 GKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLK 233
Query: 45 ---PE-CNDV-------------VASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAM 87
PE C D+ V ++ ++ Y++ G ++ A +VF ++ KD VCWT M
Sbjct: 234 NRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIM 293
Query: 88 IDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRI 147
I G +NG+ AL LF EM +N RP+ TI V+S+C++L +L G+ +H +
Sbjct: 294 IVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGV 353
Query: 148 DLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
+ + +V AL++MY +CG A +F M+ R+V ++NS+I G A++G+ +EA+ ++
Sbjct: 354 NDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYEN 413
Query: 208 MINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
M+ + ++P VTFVGVL+AC H GLV+ G E F SM+ +G+EP +HY C+V+L R G
Sbjct: 414 MLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSG 473
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSN 327
++A D I++M P+ ++ ++LS C + G ++ GE A+ L++ ++ Y++LSN
Sbjct: 474 HMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIMLSN 533
Query: 328 AYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQE 387
YA+ G+WK+ IR+ MK V+K S IE++NE+H+F+ D HP + I+ ++
Sbjct: 534 MYAARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQLNR 593
Query: 388 LKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPY--TTIRVVKNL 445
L + ++ G+SP+T +VLHD + EK ++ HSE+LA+ YGLI KP+ T IR++KN+
Sbjct: 594 LIRKLQEAGFSPNTNLVLHDFGEDEKLESINYHSEKLALAYGLIK-KPHGVTPIRIIKNI 652
Query: 446 RVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
R C DCH +K ++NIT+R +I+RD NRFHHF G CSC DYW
Sbjct: 653 RTCADCHIFMKFVSNITRRPVILRDSNRFHHFVEGKCSCKDYW 695
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 169/332 (50%), Gaps = 10/332 (3%)
Query: 23 KLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTV 82
+L+ LY K GE A +LFDEM + D + M++ Y + GLVE+ +F + +D+V
Sbjct: 63 RLLNLYAKSGEISHARKLFDEMTQ-RDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSV 121
Query: 83 CWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM 142
+ +I G NG AL +F MQ++ ++P E T V VL+AC+QL L G+ IH +
Sbjct: 122 SYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRI 181
Query: 143 GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAV 202
+ N V AL ++Y+RCG+ID+A ++F+ M R+V T+N +I+G + + + +
Sbjct: 182 IICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCI 241
Query: 203 EMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDL 262
++F EM ++P +VT VL A G +D ++F + + I GC
Sbjct: 242 DLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIVGC---- 297
Query: 263 LSRVGRPEEAYDFITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQI-AKRLLDCRSAD 318
++ G+ E+A + M + PD + S++S+C L G+ + K L + D
Sbjct: 298 -AQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDD 356
Query: 319 SGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
L + Y G ++A I + M+ V
Sbjct: 357 LLVSSALVDMYCKCGVTRDAWTIFSTMQTRNV 388
>gi|23617093|dbj|BAC20776.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
Length = 681
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/469 (41%), Positives = 283/469 (60%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H +K G + R LV YG G+ ++FDE+P DV+ ++ YV
Sbjct: 165 GSHVHALAVKAGAAGDLFVRNALVHFYGVSGDVGAMRRVFDELPRVRDVLTWNEVLAGYV 224
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G++ A EVF + V+D + W+ ++ G V+ E+ AL +FR M VRPN+ +V
Sbjct: 225 RAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGVRPNQAAVVT 284
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
LSA ++LG LE G+++H+ + + + + VG AL++MY++CG + A +VF+ M+ RD
Sbjct: 285 ALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKCGCVAVAREVFDGMRRRD 344
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +N++I GLA HG +AVE+F I++G+ PT VTFVGVLN CS GLV G F+
Sbjct: 345 VFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFK 404
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+ Y IEP++EHYGC+VDLL R G EA + I M IAPD ++ G++LS+CK HG +
Sbjct: 405 LIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPVLWGTILSSCKTHGLV 464
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
LG + +L++ SG YVLLS YA + KW E ++R M G K G S +E
Sbjct: 465 DLGVSVGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREVRKLMSSRGTNKSAGWSLMEA 524
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ ++H+F++GD H QIY + + + + GY P VLHDI + EK A+ +HS
Sbjct: 525 HGKVHKFLVGDTYHKDSVQIYDTLDMINKRLTEAGYVPDVSSVLHDIGEEEKVHAVKVHS 584
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRD 470
ERLAI YG I + + IR+VKNLRVC DCH K++ + +R+IIVRD
Sbjct: 585 ERLAIAYGFIVLEAGSPIRIVKNLRVCGDCHEFSKMVTMVFQREIIVRD 633
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 112/278 (40%), Gaps = 54/278 (19%)
Query: 101 LDLFREMQRDNVRPNEVTIVCV------------LSACSQLGALELGRWIHSYMGKHRID 148
L LF +R N P+ T + SACS LG+ +H+ K
Sbjct: 126 LTLFSRFRRRN--PHSFTFLLASISNHLNAAGPSASACSFLGS-----HVHALAVKAGAA 178
Query: 149 LNHIVGGALINMYSRCGDIDKALQVFEEMKE-RDVTTYNSLIAGLAMHGRSIEAVE---- 203
+ V AL++ Y GD+ +VF+E+ RDV T+N ++AG G A E
Sbjct: 179 GDLFVRNALVHFYGVSGDVGAMRRVFDELPRVRDVLTWNEVLAGYVRAGMMTVAREVFDE 238
Query: 204 ---------------------------MFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
+FR M+ QG+RP + V L+A + GL++ G
Sbjct: 239 MPVRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGVRPNQAAVVTALSAAARLGLLEHG 298
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
+ ++ + G+ + +VD+ ++ G A + M+ D +++
Sbjct: 299 -KFVHNVVQRSGMPVCMNVGAALVDMYAKCGCVAVAREVFDGMR-RRDVFAWNAMICGLA 356
Query: 297 IHGKLQLGEQIAKRLL-DCRSADSGTYVLLSNAYASSG 333
HG + ++ +R + + S + T+V + N + SG
Sbjct: 357 AHGLGRDAVELFERFISEGLSPTNVTFVGVLNGCSRSG 394
>gi|302793743|ref|XP_002978636.1| hypothetical protein SELMODRAFT_109283 [Selaginella moellendorffii]
gi|300153445|gb|EFJ20083.1| hypothetical protein SELMODRAFT_109283 [Selaginella moellendorffii]
Length = 438
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/435 (43%), Positives = 277/435 (63%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
+++ + + G + A +F+R W AMI V++G+ +A+ LF E+ +
Sbjct: 4 VTVLSAFAKVGNLHLAARIFARTDRSYIFPWNAMIAAYVQHGDSRQAIRLFDELLARRIE 63
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
PN VT++ VL AC+ L AL G+ +H+ H +D V A+++MYS+CG +D+A++
Sbjct: 64 PNSVTLMEVLDACASLAALRDGKRVHAIARDHGVDSEVAVATAIVDMYSKCGCLDEAVEA 123
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV 233
F ++ D ++ +++A A HG A+ F+ M QG +P VTFV +L+ACSH GLV
Sbjct: 124 FARIERHDTVSWTAMLAAFAQHGHIDRALATFQRMQEQGHKPNYVTFVHLLSACSHKGLV 183
Query: 234 DLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLS 293
+ G + F MT YGI P +HY C+VDLL R G +EA DF+ M AP +L SLLS
Sbjct: 184 EEGRKYFDLMTARYGIAPDAQHYACMVDLLGRAGYLDEAEDFLNRMPGAPHAAVLKSLLS 243
Query: 294 ACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
AC+ + + GE+IAKR+L+ +S YV+L++ Y ++GKW+EA +IR+ M E GV+K+
Sbjct: 244 ACRSYKDVDRGERIAKRMLESFWDESMPYVVLASIYRAAGKWEEAARIRSLMVERGVRKD 303
Query: 354 PGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEK 413
PG S+IEV + EF+ GD+ H Q I K+QEL +K GY P T +VLHD+ + EK
Sbjct: 304 PGRSAIEVEGRVFEFVAGDMSHVQMNPIRAKLQELSSAMKEAGYVPDTSLVLHDVAEEEK 363
Query: 414 EWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNR 473
E L HSE+LA+ +GL++T + IRV+KNLRVC DCH KLI+ I +R+I+ RD +R
Sbjct: 364 EQVLLWHSEKLAVAFGLLNTPAGSPIRVIKNLRVCKDCHDAAKLISAIEQRRIVFRDLSR 423
Query: 474 FHHFENGTCSCGDYW 488
FHHFENG CSCGDYW
Sbjct: 424 FHHFENGVCSCGDYW 438
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 1/131 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
++V +T +++ Y + G ++ A E F+R++ DTV WTAM+ ++G + RAL F+ M
Sbjct: 99 SEVAVATAIVDMYSKCGCLDEAVEAFARIERHDTVSWTAMLAAFAQHGHIDRALATFQRM 158
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM-GKHRIDLNHIVGGALINMYSRCGD 166
Q +PN VT V +LSACS G +E GR M ++ I + ++++ R G
Sbjct: 159 QEQGHKPNYVTFVHLLSACSHKGLVEEGRKYFDLMTARYGIAPDAQHYACMVDLLGRAGY 218
Query: 167 IDKALQVFEEM 177
+D+A M
Sbjct: 219 LDEAEDFLNRM 229
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/488 (39%), Positives = 290/488 (59%), Gaps = 33/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR++HG L+ G SN ++++Y +C ++A +FD VM++
Sbjct: 136 QGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFD------------VMVS-- 181
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
K+ V W A+I G R G+ +A LF M R+NV+P T
Sbjct: 182 ------------------KNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYS 223
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL AC+ +G+LE G+W+H+ M K L VG L++MY++ G I+ A +VF+ + +R
Sbjct: 224 SVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKR 283
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++NS++ G + HG A++ F EM+ I P +TF+ VL ACSH GL+D G F
Sbjct: 284 DVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYF 343
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
M + Y +EPQI HY +VDLL R G + A FI+ M I P + G+LL AC++H
Sbjct: 344 -DMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMHKN 402
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++LG A+ + + S GT+VLL N YA +G+W +A ++R MKE+GV+KEP CS +E
Sbjct: 403 MELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKMMKESGVKKEPACSWVE 462
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+ NE+H F+ D HPQR +I+ +++ +K GY P + VL ++ E+E L H
Sbjct: 463 MENEVHVFVADDDAHPQRREIHNMWEQISDKIKEIGYVPDSSHVLLCMDQQEREAKLQYH 522
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LA+ + L++T P +TIR+ KN+R+C DCHS K ++ + +R+IIVRD NRFHHF +G
Sbjct: 523 SEKLALAFALLNTPPGSTIRIKKNIRICGDCHSAFKFVSKLVEREIIVRDTNRFHHFCDG 582
Query: 481 TCSCGDYW 488
CSC DYW
Sbjct: 583 ACSCEDYW 590
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 161/310 (51%), Gaps = 7/310 (2%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D+V ++N Y + G + A ++F + +D V WTA+I G ++ AL L EM
Sbjct: 48 DDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEM 107
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALEL--GRWIHSYMGKHRIDLNHIVGGALINMYSRCG 165
R ++PN+ T+ +L A S +G+ ++ GR +H ++ D N V A+++MY+RC
Sbjct: 108 LRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCH 167
Query: 166 DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
+++A +F+ M ++ ++N+LIAG A G+ +A +F M+ + ++PT T+ VL
Sbjct: 168 HLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLC 227
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYG-CIVDLLSRVGRPEEAYDFITNMKIAPD 284
AC+ G ++ G + M + +G E + G ++D+ ++ G E+A + D
Sbjct: 228 ACASMGSLEQGKWVHALMIK-WG-EKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLA-KRD 284
Query: 285 HIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG-TYVLLSNAYASSGKWKEAVQIRA 343
+ S+L+ HG ++ Q + +L R A + T++ + A + +G E
Sbjct: 285 VVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFD 344
Query: 344 KMKEAGVQKE 353
MK+ V+ +
Sbjct: 345 MMKKYNVEPQ 354
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 130/288 (45%), Gaps = 41/288 (14%)
Query: 101 LDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINM 160
++L R+ ++N E+ +L C+ L L G+ IH+ + R + ++ L+N+
Sbjct: 1 MELIRQQCKNNAGAREICHT-LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNL 59
Query: 161 YSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTF 220
Y++CGD+ A ++F+EM RDV T+ +LI G + H R +A+ + EM+ G++P + T
Sbjct: 60 YAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTL 119
Query: 221 VGVLNACSHGGLVD-LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRV------------- 266
+L A S G D L + YG + + I+D+ +R
Sbjct: 120 ASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVM 179
Query: 267 ------------------GRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGE 305
G+ ++A+ +NM + P H S+L AC G L+ G+
Sbjct: 180 VSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGK 239
Query: 306 QIAKRLLDCRS---ADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
+ ++ A G +L + YA SG ++A ++ ++ + V
Sbjct: 240 WVHALMIKWGEKLVAFVGNTLL--DMYAKSGSIEDAKKVFDRLAKRDV 285
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/487 (40%), Positives = 291/487 (59%), Gaps = 52/487 (10%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ H +L+ G + + L+++YGKCG+
Sbjct: 311 GKWFHAYLLRNGFGMSLALVTALIDMYGKCGQ---------------------------- 342
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
V A +F+ VK KD W+ +I M + +LF EM ++V+PN VT+V
Sbjct: 343 ----VGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVS 398
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+LS C++ GAL+LG+W H+Y+ +H ++++ I+ ALINMY++CGD+ A +F E +RD
Sbjct: 399 LLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRD 458
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ +N+++AG +MHG EA+E+F EM + G+ P +TFV + +ACSH GL
Sbjct: 459 IRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGL--------- 509
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+EHYGC+VDLL R G +EA++ I NM + P+ I+ G+LL+ACK+H L
Sbjct: 510 -----------MEHYGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNL 558
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
LGE A+++L+ + G VL SN YAS+ +W + +R M +G++KEPG S IEV
Sbjct: 559 ALGEVAARKILELDPQNCGYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEV 618
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ +H F GD Q ++Y+ + E+ ++ GY+P+T VL +I++ EKE AL+ HS
Sbjct: 619 SGSVHHFKSGDKACTQTTKVYEMVTEMCIKLRESGYTPNTAAVLLNIDEEEKESALSYHS 678
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA +GLIST P T IR+VKNLR+C+DCH+ KL++ I R IIVRDRNRFHHF G
Sbjct: 679 EKLATAFGLISTAPGTPIRIVKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGY 738
Query: 482 CSCGDYW 488
CSC YW
Sbjct: 739 CSCMGYW 745
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 134/251 (53%), Gaps = 2/251 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
+V +T +I+ Y + G + +A +F R+ + V WT MI G +R+ + F M
Sbjct: 225 EVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRML 284
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ + PNE+T++ +++ C +G L+LG+W H+Y+ ++ ++ + ALI+MY +CG +
Sbjct: 285 EEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVG 344
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +F +K++DV ++ LI+ A + +F EM+N ++P VT V +L+ C+
Sbjct: 345 YARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCA 404
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
G +DLG + R +G+E + ++++ ++ G A N + D M
Sbjct: 405 EAGALDLGKWTHAYINR-HGLEVDVILETALINMYAKCGDVTIARSLF-NEAMQRDIRMW 462
Query: 289 GSLLSACKIHG 299
++++ +HG
Sbjct: 463 NTMMAGFSMHG 473
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 138/295 (46%), Gaps = 39/295 (13%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+DV ++N Y + G + +A VF ++ +D V WT M+ VR+ AL L REM
Sbjct: 121 SDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREM 180
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM----GKHRIDLNHIVGGALINMYSR 163
Q V+ + V ++ +++ L ++ GR +H Y+ G +++++ + ALI+MY +
Sbjct: 181 QFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVS--MTTALIDMYCK 238
Query: 164 CGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGV 223
G + A ++F+ + +R V ++ +IAG R E + F M+ + + P ++T + +
Sbjct: 239 GGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSL 298
Query: 224 LNACSHGGLVDLGFEIFQSMTRD-YG-----IEPQIEHYG-------------------- 257
+ C G +DLG + R+ +G + I+ YG
Sbjct: 299 ITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDV 358
Query: 258 ----CIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGE 305
++ + V ++ ++ M + P+++ + SLLS C G L LG+
Sbjct: 359 KIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGK 413
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 119/283 (42%), Gaps = 40/283 (14%)
Query: 68 NAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ-RDNVRPNEVTIVCVLSAC 126
N FS+ + +I N + + + M+ D + + +L AC
Sbjct: 39 NPHPFFSQSHFTPEANYNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKAC 98
Query: 127 SQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYN 186
+Q + +LGR +H + K+ + V AL+NMY +CG + A VF++M ERDV ++
Sbjct: 99 AQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWT 158
Query: 187 SLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL--GFEIFQSMT 244
+++ EA+ + REM G++ + V + ++ G L+D+ G + +
Sbjct: 159 TMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAV--FGNLLDMKSGRAVHGYIV 216
Query: 245 RDYGIEPQ--------IEHY---GCIV------DLLS------------------RVGRP 269
R+ G E I+ Y GC+ D LS R+
Sbjct: 217 RNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEG 276
Query: 270 EEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
+ ++ + K+ P+ I L SL++ C G L LG+ LL
Sbjct: 277 AKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLL 319
>gi|357141490|ref|XP_003572243.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Brachypodium distachyon]
Length = 884
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/483 (40%), Positives = 285/483 (59%), Gaps = 9/483 (1%)
Query: 12 LGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEM---PECNDVVASTVMINCYVEHGLVEN 68
LG R N L L C A QL + D + +T ++ Y G+ +
Sbjct: 405 LGRRGNA---FSLAILLKPCRTLSHARQLHANVVIEGHLRDSLLATSLMRSYAICGVGDC 461
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR--DNVRPNEVTIVCVLSAC 126
A +VF + +KDTV W +I RN L LF EM+R V+P+EVT + +L AC
Sbjct: 462 ARKVFDEMVMKDTVAWNVLITCYARNKRTKDTLWLFDEMRRGESEVKPDEVTCILLLQAC 521
Query: 127 SQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYN 186
+ LGAL+ G I Y +H V ++I MY+RCG ++KA QVF ++ V T++
Sbjct: 522 TSLGALDFGEQIWEYAVEHGYGCELKVRNSVITMYTRCGCVEKAYQVFCHTPQKSVVTWS 581
Query: 187 SLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRD 246
++I GLA +G +A+ F EM G+ P TF GVL+ACSH GLVD GF F M +
Sbjct: 582 AMIMGLAANGFGEDAISAFEEMSRSGVVPDGQTFTGVLSACSHSGLVDEGFRFFDMMRYE 641
Query: 247 YGIEPQIEHYGCIVDLLSRVGRPEEAYDFITN-MKIAPDHIMLGSLLSACKIHGKLQLGE 305
Y + P + HYGCIVDL+ R G +EAY+ + MK+APD + +LL AC+IHG + LGE
Sbjct: 642 YKMMPNVRHYGCIVDLMGRAGLLDEAYELVVKEMKVAPDATIWRTLLGACRIHGHVDLGE 701
Query: 306 QIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEI 365
++ L++ ++ +G YVLL N YA++G W++ ++R M+E +Q PGC+++E+N E+
Sbjct: 702 KVISHLIELKAQQAGDYVLLLNTYAAAGDWEKVAEVRKLMRENEIQTTPGCTTVELNGEL 761
Query: 366 HEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLA 425
HEFI D HP++ +IY K+ E+ + +++ GY P LHD++ KE AL HSE+LA
Sbjct: 762 HEFIADDASHPRKAEIYGKLDEINRHLRIAGYVPHVSSDLHDLDSEGKECALTYHSEKLA 821
Query: 426 ICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCG 485
I + L+ IR+ KNLRVC DCH+ K+ + + R +IVRDR RFHHF G CSC
Sbjct: 822 IAFALLVMPQRRPIRLAKNLRVCVDCHNFTKVFSGVYNRLVIVRDRTRFHHFNGGQCSCN 881
Query: 486 DYW 488
DYW
Sbjct: 882 DYW 884
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/454 (41%), Positives = 283/454 (62%), Gaps = 1/454 (0%)
Query: 35 KDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRN 94
KD E +D+ S +++ Y + G + +A VFS ++VKD V W MI G +N
Sbjct: 372 KDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKN 431
Query: 95 GEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG 154
AL+LF EMQ N +PN +T+ C+L AC+ L ALE G+ IH ++ ++ L+ V
Sbjct: 432 SLPNEALNLFVEMQY-NSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVA 490
Query: 155 GALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIR 214
AL++MY +CG + A +F+ + E+D+ ++ +IAG MHG EA+ F EM N GI
Sbjct: 491 NALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIE 550
Query: 215 PTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYD 274
P +V+F+ +L ACSH GL+D G+ F M + IEP+ EHY CIVDLL+R G +AY
Sbjct: 551 PDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYK 610
Query: 275 FITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGK 334
FI M I PD + G+LL C+I+ ++L E++A+ + + ++G YVLL+N YA + K
Sbjct: 611 FIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEK 670
Query: 335 WKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKL 394
W+E ++R ++ G++K PGCS IE+ ++H F+ GD HP +I +++ + +K
Sbjct: 671 WEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKE 730
Query: 395 EGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSM 454
EG+ P L +D EKE AL HSE++A+ +G++S P T+RV KNLRVC DCH M
Sbjct: 731 EGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEM 790
Query: 455 IKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
K ++ + KR II+RD NRFHHF++G+CSC +W
Sbjct: 791 AKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 824
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 168/363 (46%), Gaps = 53/363 (14%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR IH + + + KLV +Y CG+ ++ ++FD++ V +++N Y
Sbjct: 119 DGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVAN-EKVFLWNLLMNGY 177
Query: 61 VEHG------------------LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALD 102
+ G VE+A ++F + +D + W +MI G V NG + LD
Sbjct: 178 AKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLD 237
Query: 103 LFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYS 162
LF +M + + T+V V++ CS G L LGR +H Y K + L++MYS
Sbjct: 238 LFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYS 297
Query: 163 RCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVG 222
+ G+++ A+QVFE M ER V ++ S+IAG A G S +V +F EM +GI P T
Sbjct: 298 KSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITT 357
Query: 223 VLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGR-------------- 268
+L+AC+ GL++ G ++ + ++ ++ + ++D+ ++ G
Sbjct: 358 ILHACACTGLLENGKDV-HNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVK 416
Query: 269 -----------------PEEAYDFITNMKI--APDHIMLGSLLSACKIHGKLQLGEQIAK 309
P EA + M+ P+ I + +L AC L+ G++I
Sbjct: 417 DIVSWNTMIGGYSKNSLPNEALNLFVEMQYNSKPNSITMACILPACASLAALERGQEIHG 476
Query: 310 RLL 312
+L
Sbjct: 477 HIL 479
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 179/381 (46%), Gaps = 43/381 (11%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMI 57
+G ++ Q+L LG+ ++ +T + +V G L + + ++ + ++
Sbjct: 234 KGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLL 293
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y + G + +A +VF + + V WT+MI G R G ++ LF EM+++ + P+
Sbjct: 294 DMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIF 353
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
TI +L AC+ G LE G+ +H+Y+ ++++ + V AL++MY++CG + A VF EM
Sbjct: 354 TITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEM 413
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
+ +D+ ++N++I G + + EA+ +F EM +P +T +L AC+ ++ G
Sbjct: 414 QVKDIVSWNTMIGGYSKNSLPNEALNLFVEM-QYNSKPNSITMACILPACASLAALERGQ 472
Query: 238 EIFQSMTRD-YGIEPQIEHYGCIVDLLSRVGR-----------PEE-------------- 271
EI + R+ + ++ + + +VD+ + G PE+
Sbjct: 473 EIHGHILRNGFSLDRHVAN--ALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGM 530
Query: 272 ---------AYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD--CRSADSG 320
A++ + N I PD + S+L AC G L G + + C S
Sbjct: 531 HGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSE 590
Query: 321 TYVLLSNAYASSGKWKEAVQI 341
Y + + A +G +A +
Sbjct: 591 HYACIVDLLARAGNLSKAYKF 611
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 140/338 (41%), Gaps = 91/338 (26%)
Query: 95 GEMARALDLFREMQRDNVRPNEVTIVC-VLSACSQLGALELGRWIHSYMGKHRIDLNHIV 153
G + RA++L + + ++ E+ C VL C+ L +++ GR IHS + + ++++ ++
Sbjct: 82 GNLRRAMELINQSPKPDL---ELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVL 138
Query: 154 GGALINMYSRCGD----------------------------------------------- 166
G L+ MY CGD
Sbjct: 139 GSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGI 198
Query: 167 --IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL 224
++ A ++F+E+ +RDV ++NS+I+G +G S + +++F +M+ GI T V V+
Sbjct: 199 RRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVV 258
Query: 225 NACSHGGLVDLGFEIF-QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM---- 279
CS+ G++ LG + ++ +G E + + C++D+ S+ G A M
Sbjct: 259 AGCSNTGMLLLGRALHGYAIKASFGKELTLNN--CLLDMYSKSGNLNSAIQVFETMGERS 316
Query: 280 ------------------------------KIAPDHIMLGSLLSACKIHGKLQLGEQIAK 309
I+PD + ++L AC G L+ G+ +
Sbjct: 317 VVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHN 376
Query: 310 RLLDCR-SADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
+ + + +D L + YA G +A + ++M+
Sbjct: 377 YIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQ 414
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 36/193 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIHG +L+ G +R LV++Y KCG A LFD +PE D+V+ TVMI Y
Sbjct: 471 GQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPE-KDLVSWTVMIAGYG 529
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG + A+ F EM+ + P+EV+ +
Sbjct: 530 MHGY-------------------------------GSEAIAAFNEMRNSGIEPDEVSFIS 558
Query: 122 VLSACSQLGALELGRWIHSYMGKHR--IDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
+L ACS G L+ G W M ++ I+ ++++ +R G++ KA + + M
Sbjct: 559 ILYACSHSGLLDEG-WGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPI 617
Query: 179 ERDVTTYNSLIAG 191
E D T + +L+ G
Sbjct: 618 EPDATIWGALLCG 630
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/483 (39%), Positives = 297/483 (61%), Gaps = 7/483 (1%)
Query: 13 GLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMP----ECNDVVASTVMINCYVEHGLVEN 68
G+ + T L L +CG+ + M + D++A +++ Y + +E
Sbjct: 266 GVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEA 325
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR-DNVRPNEVTIVCVLSACS 127
A +F + V+D V W +I G ++NG + A+ ++ MQ+ + ++P + T V VL A S
Sbjct: 326 AQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYS 385
Query: 128 QLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNS 187
LGAL+ G +H+ K ++L+ VG +I++Y++CG +D+A+ +FE+ R +N+
Sbjct: 386 HLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNA 445
Query: 188 LIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDY 247
+I+G+ +HG +A+ +F +M +GI P VTFV +L ACSH GLVD G F M Y
Sbjct: 446 VISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAY 505
Query: 248 GIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQI 307
GI+P +HY C+VD+ R G+ ++A+DFI NM I PD + G+LL AC+IHG +++G+
Sbjct: 506 GIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVA 565
Query: 308 AKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHE 367
++ L + + G YVL+SN YA GKW ++R+ ++ +QK PG SSIEV ++
Sbjct: 566 SQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNV 625
Query: 368 FILGDIR--HPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLA 425
F G+ HPQ E+I +++ +L ++ GY P VL D+E+ EKE L HSERLA
Sbjct: 626 FYSGNQMNIHPQHEEIQRELLDLLAKIRSLGYVPDYSFVLQDVEEDEKEQILNNHSERLA 685
Query: 426 ICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCG 485
I +G+I+T P T + + KNLRVC DCH+ K I+ IT+R+IIVRD NRFHHF++G CSCG
Sbjct: 686 IAFGIINTPPRTPLHIYKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGYCSCG 745
Query: 486 DYW 488
D+W
Sbjct: 746 DFW 748
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 154/304 (50%), Gaps = 43/304 (14%)
Query: 40 LFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMAR 99
L DE+ CN MI+ Y + G++E +VF + +D V W ++I G + G++A
Sbjct: 201 LDDELFVCN------AMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVAS 254
Query: 100 ALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGG-ALI 158
A+++F M+ V P+ +T++ + SA +Q G + GR +H YM + D+ I+ G A++
Sbjct: 255 AVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIV 314
Query: 159 NMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM-INQGIRPTK 217
+MY++ I+ A ++F+ M RD ++N+LI G +G + EA+ ++ M ++G++P +
Sbjct: 315 DMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQ 374
Query: 218 VTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEE------ 271
TFV VL A SH G + G + +++ G+ + C++DL ++ G+ +E
Sbjct: 375 GTFVSVLPAYSHLGALQQGTRM-HALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFE 433
Query: 272 -------------------------AYDFITNMK---IAPDHIMLGSLLSACKIHGKLQL 303
A + M+ I+PDH+ SLL+AC G +
Sbjct: 434 QTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQ 493
Query: 304 GEQI 307
G
Sbjct: 494 GRNF 497
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 149/307 (48%), Gaps = 7/307 (2%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D AS +++ Y+ G V +A+ F ++ +D W AM+ GL RN A A+ LF M
Sbjct: 103 DAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMV 162
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ V + VT+ VL C LG L +H Y KH +D V A+I++Y + G ++
Sbjct: 163 MEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLE 222
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+ +VF+ M RD+ T+NS+I+G G+ AVEMF M + G+ P +T + + +A +
Sbjct: 223 EVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIA 282
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
G + G + M R I IVD+ +++ + E A +M + D +
Sbjct: 283 QCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVR-DAVSW 341
Query: 289 GSLLSACKIHG----KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAK 344
+L++ +G + + + + K + GT+V + AY+ G ++ ++ A
Sbjct: 342 NTLITGYMQNGLASEAIHVYDHMQKH--EGLKPIQGTFVSVLPAYSHLGALQQGTRMHAL 399
Query: 345 MKEAGVQ 351
+ G+
Sbjct: 400 SIKTGLN 406
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 40/201 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G +H +K GL + +++LY KCG+ +AM LF++ P
Sbjct: 392 QGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPR-------------- 437
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ T W A+I G+ +G A+AL LF +MQ++ + P+ VT V
Sbjct: 438 ------------------RSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFV 479
Query: 121 CVLSACSQLGALELGRWIHSYM----GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
+L+ACS G ++ GR + M G I ++ +++M+ R G +D A
Sbjct: 480 SLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHY---ACMVDMFGRAGQLDDAFDFIRN 536
Query: 177 MK-ERDVTTYNSLIAGLAMHG 196
M + D + +L+ +HG
Sbjct: 537 MPIKPDSAIWGALLGACRIHG 557
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/451 (41%), Positives = 282/451 (62%)
Query: 38 MQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEM 97
++ +EM + T ++N Y + G +E A VF + KD V W+ MI G N
Sbjct: 235 VKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFP 294
Query: 98 ARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGAL 157
++LF +M ++N++P++ +IV LS+C+ LGAL+LG W S + +H N + AL
Sbjct: 295 KEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANAL 354
Query: 158 INMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTK 217
I+MY++CG + + +VF+EMKE+D+ N+ I+GLA +G + +F + GI P
Sbjct: 355 IDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDG 414
Query: 218 VTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFIT 277
TF+G+L C H GL+ G F +++ Y ++ +EHYGC+VDL R G ++AY I
Sbjct: 415 STFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLIC 474
Query: 278 NMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKE 337
+M + P+ I+ G+LLS C++ QL E + K L+ ++G YV LSN Y+ G+W E
Sbjct: 475 DMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDE 534
Query: 338 AVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGY 397
A ++R M + G++K PG S IE+ ++HEF+ D HP ++IY K+++L ++L G+
Sbjct: 535 AAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGF 594
Query: 398 SPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKL 457
P+TE V D+E+ EKE L HSE+LA+ GLIST IRVVKNLRVC DCH ++KL
Sbjct: 595 VPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKL 654
Query: 458 IANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
I+ IT+R+I+VRD NRFH F NG+CSC DYW
Sbjct: 655 ISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 160/307 (52%), Gaps = 20/307 (6%)
Query: 2 GREIHGQVLKLGLR-----SNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVM 56
G +HG L L+ S+R + L L KCG F+ +DV A T +
Sbjct: 106 GLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCG--------FN-----HDVAAMTSL 152
Query: 57 INCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
++ Y G + +A ++F + + V WTA+ G +G A+DLF++M V+P+
Sbjct: 153 LSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDS 212
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
IV VLSAC +G L+ G WI YM + + N V L+N+Y++CG ++KA VF+
Sbjct: 213 YFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDS 272
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
M E+D+ T++++I G A + E +E+F +M+ + ++P + + VG L++C+ G +DLG
Sbjct: 273 MVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLG 332
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
E S+ + + ++D+ ++ G ++ MK D +++ + +S
Sbjct: 333 -EWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAISGLA 390
Query: 297 IHGKLQL 303
+G ++L
Sbjct: 391 KNGHVKL 397
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 153/340 (45%), Gaps = 48/340 (14%)
Query: 54 TVMINCYVEHGL----VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
T ++N ++ L + ++ +FS + + + ++I+G V N LDLF +++
Sbjct: 45 TFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRK 104
Query: 110 DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGG--ALINMYSRCGDI 167
+ + T VL AC++ + +LG +HS + K NH V +L+++YS G +
Sbjct: 105 HGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVK--CGFNHDVAAMTSLLSIYSGSGRL 162
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+ A ++F+E+ +R V T+ +L +G GR EA+++F++M+ G++P V VL+AC
Sbjct: 163 NDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSAC 222
Query: 228 SHGGLVDLGFEIFQSMTR------------------------------DYGIEPQIEHYG 257
H G +D G I + M D +E I +
Sbjct: 223 VHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWS 282
Query: 258 CIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC 314
++ + P+E + M + PD + LS+C G L LGE L+D
Sbjct: 283 TMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEW-GISLID- 340
Query: 315 RSADSGTYVLLSNA----YASSGKWKEAVQIRAKMKEAGV 350
+ T + ++NA YA G ++ +MKE +
Sbjct: 341 -RHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDI 379
>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
Length = 613
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/466 (42%), Positives = 280/466 (60%), Gaps = 1/466 (0%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
+V + G+ A + F PE D V T M++ Y++ G V A + F + V++ V
Sbjct: 148 MVSGFACSGDMSTAEEWFRNAPEKEDAVLWTAMVSGYMDIGNVVKAIKYFEAMPVRNLVS 207
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTIVCVLSACSQLGALELGRWIHSYM 142
W A++ G V+N AL LFR M R+ NV+PN T+ VL CS L AL G+ IH +
Sbjct: 208 WNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWC 267
Query: 143 GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAV 202
K + N VG +L++MY +CGD+ A +F EM RDV +N++I+G A HG EA+
Sbjct: 268 MKLLLSRNLTVGTSLVSMYCKCGDLSSACILFGEMHTRDVVAWNAMISGYAQHGDGKEAI 327
Query: 203 EMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDL 262
+F M ++G+ P +TFV VL AC H GL D G + F+ M YGIEP+++HY C+VDL
Sbjct: 328 NLFERMKDEGVEPNWITFVVVLTACIHTGLCDFGIQCFEGMQELYGIEPRVDHYSCMVDL 387
Query: 263 LSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTY 322
L R G+ E A DFI +M P G+LL+AC+++ L+ E A +L++ +G Y
Sbjct: 388 LCRAGKLERAVDFIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAY 447
Query: 323 VLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIY 382
V L+N YA + +W + ++R MK+ V K PG S IE+ +HEF D HPQ I+
Sbjct: 448 VQLANIYAVANQWDDVSRVRRWMKDNTVVKTPGYSWIEIKGVLHEFRSNDRLHPQLYLIH 507
Query: 383 KKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVV 442
+K+ +L + +K GY P + VLHD+++ K L HSE+LAI +GLIST T+R+
Sbjct: 508 EKLGQLAERMKEMGYVPDLDFVLHDVDETMKVQMLMRHSEKLAIAFGLISTAHGMTLRIF 567
Query: 443 KNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
KNLRVC DCH+ K+I+ I R+II+RD RFHHF G CSC DYW
Sbjct: 568 KNLRVCGDCHNAAKVISMIEDREIILRDTTRFHHFRGGHCSCDDYW 613
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 153/340 (45%), Gaps = 48/340 (14%)
Query: 15 RSNRSTRLKLVELYGKC-GEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVF 73
R +T L+ Y + G DA LFD +P DVV+ ++ C+ G + A +F
Sbjct: 45 RKTTATYNCLLAGYARAPGRLADARHLFDRIPT-PDVVSYNTLLLCHFASGDADGARRLF 103
Query: 74 SRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALE 133
+ + V+D W M+ GL ++G + A +F M VR N V+ ++S + G +
Sbjct: 104 ASMPVRDVASWNTMVSGLSKSGAVEEAKVVFLAMP---VR-NSVSWNAMVSGFACSGDMS 159
Query: 134 LG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGL 192
W + K + ++ A+++ Y G++ KA++ FE M R++ ++N+++AG
Sbjct: 160 TAEEWFRNAPEKE----DAVLWTAMVSGYMDIGNVVKAIKYFEAMPVRNLVSWNAVVAGY 215
Query: 193 AMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEP 251
+ + +A+ +FR M+ + ++P T VL CS+ + G +I
Sbjct: 216 VKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQI------------ 263
Query: 252 QIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
H C+ LLSR + + + G L SAC + G++ + +A
Sbjct: 264 ---HQWCMKLLLSR--------NLTVGTSLVSMYCKCGDLSSACILFGEMHTRDVVA--- 309
Query: 312 LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
+ + + YA G KEA+ + +MK+ GV+
Sbjct: 310 ----------WNAMISGYAQHGDGKEAINLFERMKDEGVE 339
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 43/209 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G++IH +KL L N + LV +Y KCG+ A LF EM DVVA MI+ Y
Sbjct: 260 GKQIHQWCMKLLLSRNLTVGTSLVSMYCKCGDLSSACILFGEM-HTRDVVAWNAMISGYA 318
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+HG DG A++LF M+ + V PN +T V
Sbjct: 319 QHG------------------------DG-------KEAINLFERMKDEGVEPNWITFVV 347
Query: 122 VLSACSQLGALELGRWIHSYMGKHRI-----DLNHIVGGALINMYSRCGDIDKALQVFEE 176
VL+AC G + G I + G + ++H ++++ R G +++A+
Sbjct: 348 VLTACIHTGLCDFG--IQCFEGMQELYGIEPRVDHY--SCMVDLLCRAGKLERAVDFIRS 403
Query: 177 MK-ERDVTTYNSLIAGLAMHGRSIEAVEM 204
M E + Y +L+A ++ +++E E+
Sbjct: 404 MPFEPHPSAYGTLLAACRVY-KNLEFAEL 431
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/440 (43%), Positives = 284/440 (64%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D+ A +++ Y + GL++ A +F + VKDTV ++A++ G V+NG A +F++MQ
Sbjct: 259 DLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQ 318
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
NV P+ T+V ++ ACS L AL+ GR H + + + ALI+MY++CG ID
Sbjct: 319 ACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRID 378
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+ QVF M RD+ ++N++IAG +HG EA +F EM N G P VTF+ +L+ACS
Sbjct: 379 LSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACS 438
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLV G F M YG+ P++EHY C+VDLLSR G +EAY+FI +M + D +
Sbjct: 439 HSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVW 498
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+LL AC+++ + LG+++++ + + +G +VLLSN Y+++G++ EA ++R K
Sbjct: 499 VALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQ 558
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
G +K PGCS IE+N +H F+ GD HPQ +IY+++ + +K GY P T VL D+
Sbjct: 559 GFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDL 618
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
E+ EKE AL HSE+LAI YG++S TI V KNLRVC DCH++IK I+ + +R IIV
Sbjct: 619 EEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIV 678
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD NRFHHF+NG CSCGD+W
Sbjct: 679 RDANRFHHFKNGQCSCGDFW 698
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 163/338 (48%), Gaps = 32/338 (9%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G +H ++ L NR+++ KL + V+ T +++ Y
Sbjct: 131 QGTSVHAYCIRACLHPNRNSKSKLTD----------------------GVLLGTALLDMY 168
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV-RPNEVTI 119
+ G + A VF + ++ V W+A+I G V M +A LF+ M + + +I
Sbjct: 169 AKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSI 228
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
L AC+ L L +G +H+ + K + + G +L++MY++ G ID+A+ +F+EM
Sbjct: 229 ASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV 288
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+D +Y++L++G +GR+ EA +F++M + P T V ++ ACSH + G
Sbjct: 289 KDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCS 348
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
S+ G+ + ++D+ ++ GR + + + NM + D + ++++ IHG
Sbjct: 349 HGSVIIR-GLASETSICNALIDMYAKCGRIDLSRQ-VFNMMPSRDIVSWNTMIAGYGIHG 406
Query: 300 KLQLGEQIAKRLLDCRS----ADSGTYVLLSNAYASSG 333
LG++ L+ + D T++ L +A + SG
Sbjct: 407 ---LGKEATALFLEMNNLGFPPDGVTFICLLSACSHSG 441
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 144/296 (48%), Gaps = 20/296 (6%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALD--LFRE 106
D+ ST +++ YV+ + +A +F+ + +D V W AM+ G +G A+ L +
Sbjct: 44 DLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQ 103
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM----------GKHRIDLNHIVGGA 156
MQ +RPN T+V +L +Q GAL G +H+Y K ++ ++G A
Sbjct: 104 MQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTA 163
Query: 157 LINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG---I 213
L++MY++CG + A +VF+ M R+ T+++LI G + R +A +F+ M+ QG +
Sbjct: 164 LLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFL 223
Query: 214 RPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAY 273
PT + L AC+ + +G E ++ G+ + ++ + ++ G ++A
Sbjct: 224 SPTSIA--SALRACASLDHLRMG-EQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAI 280
Query: 274 DFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNA 328
M + D + +L+S +G+ + + K++ C D+ T V L A
Sbjct: 281 ALFDEMAV-KDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPA 335
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 2/135 (1%)
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M R V PN T L ACS L GR IH + + + V AL++MY +C
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ--GIRPTKVTFVGVL 224
+ A +F M RD+ +N+++AG A HG AV M Q +RP T V +L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 225 NACSHGGLVDLGFEI 239
+ G + G +
Sbjct: 121 PLLAQQGALAQGTSV 135
>gi|357124715|ref|XP_003564043.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Brachypodium distachyon]
Length = 599
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/467 (41%), Positives = 290/467 (62%), Gaps = 2/467 (0%)
Query: 24 LVELYGKCGEFKDAMQLFDE--MPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDT 81
L+ Y G A +LF P DVV+ T M+ GLV++A ++F + ++
Sbjct: 133 LLAAYLANGRADLASRLFGSCSSPGDLDVVSWTTMVGGLCRLGLVDDARKLFDGMPERNL 192
Query: 82 VCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSY 141
+ W AMI G V+ G AL++F +M+ + N + AC+ G L GR +H +
Sbjct: 193 ISWNAMISGYVKAGRFLDALEVFDQMRALGIEGNGFVAASAVVACTGAGVLARGREVHRW 252
Query: 142 MGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEA 201
+ + I ++ + A+++MY +CG +++A VF+ + + +T++N +I GLA+HGR +A
Sbjct: 253 VEQSGITMDEKLATAVVDMYCKCGSVEEAWHVFKVLPTKGLTSWNCMIGGLAVHGRCKDA 312
Query: 202 VEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVD 261
+E+F EM + + P VT V VL AC+H G+V G F + + YGIEP++EHYGC+VD
Sbjct: 313 IELFHEMEREDVAPDDVTLVNVLTACAHTGMVSDGHNYFNYIVQRYGIEPKMEHYGCMVD 372
Query: 262 LLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT 321
L R G +EA I +M + PD +LG+L ACKIH L LGE I R+++ +SG
Sbjct: 373 LFGRAGLLDEAKKVIDDMPMEPDIGVLGALFGACKIHRDLDLGEAIGWRVIELDPQNSGR 432
Query: 322 YVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQI 381
YVLL+N AS+G+W + ++R M E V KE G S IE++ E+ EF G + H Q ++I
Sbjct: 433 YVLLANLLASAGQWVDVAKVRRLMDERNVSKEAGRSVIEIDGEVCEFQCGSLCHAQEKEI 492
Query: 382 YKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRV 441
+ ++++ + ++LEGY P T VLHDI + EKE L HSE+LAI +GL+ T+P T+R+
Sbjct: 493 FAAVKDMMRKIRLEGYMPDTSDVLHDITEEEKEVPLQYHSEKLAIAFGLLRTRPGDTVRI 552
Query: 442 VKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
KNLRVC DCH K I+ + +R+I+VRDRNRFHHF++GTCSC DYW
Sbjct: 553 TKNLRVCRDCHEATKFISRVFEREIVVRDRNRFHHFKDGTCSCRDYW 599
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 34/196 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GRE+H V + G+ + +V++Y KCG
Sbjct: 246 GREVHRWVEQSGITMDEKLATAVVDMYCKCGS---------------------------- 277
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
VE A+ VF + K W MI GL +G A++LF EM+R++V P++VT+V
Sbjct: 278 ----VEEAWHVFKVLPTKGLTSWNCMIGGLAVHGRCKDAIELFHEMEREDVAPDDVTLVN 333
Query: 122 VLSACSQLGALELGRWIHSYM-GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VL+AC+ G + G +Y+ ++ I+ G +++++ R G +D+A +V ++M E
Sbjct: 334 VLTACAHTGMVSDGHNYFNYIVQRYGIEPKMEHYGCMVDLFGRAGLLDEAKKVIDDMPME 393
Query: 180 RDVTTYNSLIAGLAMH 195
D+ +L +H
Sbjct: 394 PDIGVLGALFGACKIH 409
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/491 (39%), Positives = 295/491 (60%), Gaps = 6/491 (1%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+++H + + + + LV++Y KCG +FD + N + + T MI+ Y
Sbjct: 123 QGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSI-SWTAMISGY 181
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR---DNVRPNEV 117
+ G +A ++F ++ VK+ + WTA+I GLV++G + LF EM+ D V P
Sbjct: 182 AQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDP--F 239
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+ ++ A + L L LG+ IH + + + V AL++MY++C D+ A ++F M
Sbjct: 240 ILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRM 299
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
+RD+ ++ S+I G A HG + EA+ ++ M++ G++P +VTFVG++ ACSH GLV G
Sbjct: 300 VQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGR 359
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F SM +DYGI P ++HY C++DLLSR G EEA + I M PD +LLSAC
Sbjct: 360 YFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNH 419
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
H +G ++A LL + D TY+LLSN YAS+ W+ ++R M V+KEPG S
Sbjct: 420 HRNTLIGIRVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYS 479
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
I + E F+ G+ HP +E+I+ ++EL +K GY P T VLHD+E EKE L
Sbjct: 480 CIVLGKESQVFLAGETSHPAKEEIFGLLEELDAEMKKRGYIPDTSSVLHDLEQQEKERQL 539
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSERLA+ YGL+ P + +VKNLRVC DCH+++K I+ I KR+I+VRD NR+HHF
Sbjct: 540 FWHSERLAVAYGLLKGIPGMVLHIVKNLRVCGDCHTVLKFISIIVKREIVVRDANRYHHF 599
Query: 478 ENGTCSCGDYW 488
++G CSC ++W
Sbjct: 600 KDGKCSCNNFW 610
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 123/250 (49%), Gaps = 38/250 (15%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H ++K G+ +S L+ +YGKCG +DA+ LF+++P
Sbjct: 22 GKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPH--------------- 66
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPNEVTIV 120
+D + W +++ + L +F M ++D ++P+
Sbjct: 67 -----------------RDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFA 109
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
C++ AC+ LGA++ G+ +H+ + + +V +L++MY++CG D VF+ + +
Sbjct: 110 CLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSK 169
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+ ++ ++I+G A GR ++A+++F++M + + G++ + G VD F +F
Sbjct: 170 NSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQS---GNWVD-SFYLF 225
Query: 241 QSMTRDYGIE 250
M R GI+
Sbjct: 226 MEM-RSKGID 234
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 106/237 (44%), Gaps = 14/237 (5%)
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
+V L AC++ + +G+ +H ++ K ID + LINMY +CG I AL +F ++
Sbjct: 6 LVYQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLP 65
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ-GIRPTKVTFVGVLNACSHGGLVDLGF 237
RD ++ S++ + MF M Q G++P F ++ AC+ G + G
Sbjct: 66 HRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGK 125
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE---EAYDFITNMKIAPDHIMLGSLLSA 294
++ + + + +VD+ ++ G P+ +D I++ M+ +
Sbjct: 126 QVHATFIVSPVSDDDVVK-SSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQS 184
Query: 295 CKIHGKLQLGEQIA-KRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
+ +QL +++ K LL ++ L + SG W ++ + +M+ G+
Sbjct: 185 GRKLDAIQLFQKMPVKNLL--------SWTALISGLVQSGNWVDSFYLFMEMRSKGI 233
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/440 (43%), Positives = 284/440 (64%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D+ A +++ Y + GL++ A +F + VKDTV ++A++ G V+NG A +F++MQ
Sbjct: 374 DLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQ 433
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
NV P+ T+V ++ ACS L AL+ GR H + + + ALI+MY++CG ID
Sbjct: 434 ACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRID 493
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+ QVF M RD+ ++N++IAG +HG EA +F EM N G P VTF+ +L+ACS
Sbjct: 494 LSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACS 553
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLV G F M YG+ P++EHY C+VDLLSR G +EAY+FI +M + D +
Sbjct: 554 HSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVW 613
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+LL AC+++ + LG+++++ + + +G +VLLSN Y+++G++ EA ++R K
Sbjct: 614 VALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQ 673
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
G +K PGCS IE+N +H F+ GD HPQ +IY+++ + +K GY P T VL D+
Sbjct: 674 GFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDL 733
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
E+ EKE AL HSE+LAI YG++S TI V KNLRVC DCH++IK I+ + +R IIV
Sbjct: 734 EEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIV 793
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD NRFHHF+NG CSCGD+W
Sbjct: 794 RDANRFHHFKNGQCSCGDFW 813
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 163/338 (48%), Gaps = 32/338 (9%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G +H ++ L NR+++ KL + V+ T +++ Y
Sbjct: 246 QGTSVHAYCIRACLHPNRNSKSKLTD----------------------GVLLGTALLDMY 283
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV-RPNEVTI 119
+ G + A VF + ++ V W+A+I G V M +A LF+ M + + +I
Sbjct: 284 AKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSI 343
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
L AC+ L L +G +H+ + K + + G +L++MY++ G ID+A+ +F+EM
Sbjct: 344 ASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV 403
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+D +Y++L++G +GR+ EA +F++M + P T V ++ ACSH + G
Sbjct: 404 KDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCS 463
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
S+ G+ + ++D+ ++ GR + + + NM + D + ++++ IHG
Sbjct: 464 HGSVIIR-GLASETSICNALIDMYAKCGRIDLSRQ-VFNMMPSRDIVSWNTMIAGYGIHG 521
Query: 300 KLQLGEQIAKRLLDCRS----ADSGTYVLLSNAYASSG 333
LG++ L+ + D T++ L +A + SG
Sbjct: 522 ---LGKEATALFLEMNNLGFPPDGVTFICLLSACSHSG 556
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 144/296 (48%), Gaps = 20/296 (6%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALD--LFRE 106
D+ ST +++ YV+ + +A +F+ + +D V W AM+ G +G A+ L +
Sbjct: 159 DLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQ 218
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM----------GKHRIDLNHIVGGA 156
MQ +RPN T+V +L +Q GAL G +H+Y K ++ ++G A
Sbjct: 219 MQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTA 278
Query: 157 LINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG---I 213
L++MY++CG + A +VF+ M R+ T+++LI G + R +A +F+ M+ QG +
Sbjct: 279 LLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFL 338
Query: 214 RPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAY 273
PT + L AC+ + +G E ++ G+ + ++ + ++ G ++A
Sbjct: 339 SPTSIA--SALRACASLDHLRMG-EQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAI 395
Query: 274 DFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNA 328
M + D + +L+S +G+ + + K++ C D+ T V L A
Sbjct: 396 ALFDEMAVK-DTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPA 450
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 4/184 (2%)
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARA--LDLFREMQRDNVRPNEV 117
++ G + A +F ++ D + +I + A A L L+R M R V PN
Sbjct: 67 HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T L ACS L GR IH + + + V AL++MY +C + A +F M
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ--GIRPTKVTFVGVLNACSHGGLVDL 235
RD+ +N+++AG A HG AV M Q +RP T V +L + G +
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246
Query: 236 GFEI 239
G +
Sbjct: 247 GTSV 250
>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/487 (39%), Positives = 282/487 (57%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIHG +++ GL S+ L+++YGKCG
Sbjct: 237 GKEIHGHIVRAGLDSDEVLWSSLMDMYGKCG----------------------------- 267
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ A +F ++ KD V WT+MID ++ LF E+ RPNE T
Sbjct: 268 ---CIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAG 324
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL+AC+ L ELG+ +H YM + D +L++MY++CG+I+ A V + + D
Sbjct: 325 VLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPD 384
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++ SLI G A +G+ EA++ F ++ G +P VTFV VL+AC+H GLV+ G E F
Sbjct: 385 LVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFY 444
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
S+T + + +HY C+VDLL+R GR E+ I+ M + P + S+L C +G +
Sbjct: 445 SITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNI 504
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
L E+ A+ L + TYV ++N YA++GKW+E ++R +M+E GV K PG S E+
Sbjct: 505 DLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEI 564
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ H FI D HP QI + ++EL++ +K EGY P+T +VLHD+ED +KE L HS
Sbjct: 565 KRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHS 624
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ + ++ST+ T I+V KNLR C DCH IK I+NITKRKI VRD RFH FENG
Sbjct: 625 EKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQ 684
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 685 CSCGDYW 691
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 117/271 (43%), Gaps = 19/271 (7%)
Query: 87 MIDGLVRNGEMARALDLF--REMQRDNV-------RPNEVTIVCVLSACSQLGALELGRW 137
+++ L R A+D+ +++ R+ V +P T ++ CSQ ALE G+
Sbjct: 47 VVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKK 106
Query: 138 IHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR 197
+H ++ ++ L+ MY++CG + A +VF+EM RD+ ++N ++ G A G
Sbjct: 107 VHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGL 166
Query: 198 SIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYG 257
EA ++F EM + ++ ++ + ++ M R P I
Sbjct: 167 LEEARKLFDEMTEK----DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVS 222
Query: 258 CIVDLLSR---VGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC 314
V + + R +E + I + D ++ SL+ G + I ++++
Sbjct: 223 IAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVE- 281
Query: 315 RSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
D ++ + + Y S +W+E + +++
Sbjct: 282 --KDVVSWTSMIDRYFKSSRWREGFSLFSEL 310
>gi|356573508|ref|XP_003554900.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Glycine max]
Length = 629
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/498 (41%), Positives = 305/498 (61%), Gaps = 15/498 (3%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
++H V+K G + +++ Y KCG +A ++F+E+ E VV+ TV++ V+
Sbjct: 134 QMHVGVVKFGFLRHTKVLNGVMDGYVKCGLVGEARRVFEEIEE-PSVVSWTVVLEGVVKC 192
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD---NVRPNEVTIV 120
VE+ VF + ++ V WT +I G V +G A L +EM N +T+
Sbjct: 193 EGVESGKVVFDEMPERNEVAWTVLIKGYVGSGFTKEAFLLLKEMVFGCGFGFGLNSITLC 252
Query: 121 CVLSACSQLGALELGRWIHSYMGKH-RIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
VLSACSQ G + +GRW+H Y K DL +VG +L++MY++CG I AL VF M
Sbjct: 253 SVLSACSQSGDVSVGRWVHCYAVKAVGWDLGVMVGTSLVDMYAKCGRISAALMVFRHMPR 312
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
R+V +N+++ GLAMHG VEMF M+ + ++P VTF+ +L++CSH GLV+ G++
Sbjct: 313 RNVVAWNAMLCGLAMHGMGKVVVEMFACMVEE-VKPDAVTFMALLSSCSHSGLVEQGWQY 371
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F + R YGI P+IEHY C+VDLL R GR EEA D + + I P+ ++LGSLL AC HG
Sbjct: 372 FHDLERAYGIRPEIEHYACMVDLLGRAGRLEEAEDLVKKLPIPPNEVVLGSLLGACYAHG 431
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
KL+LGE+I + L+ ++ ++LLSN YA GK +A +R +K G++K PG SSI
Sbjct: 432 KLRLGEKIMRELVQMDPLNTEYHILLSNMYALCGKADKANSLRKVLKNRGIRKVPGMSSI 491
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEV-VLHDIEDW------- 411
V+ ++H FI GD HP+ IY K+ ++ ++L GY P+T VL +
Sbjct: 492 YVDGQLHRFIAGDKSHPRTADIYMKLDDMICKLRLAGYVPNTNCQVLFGCSNGDDCMEAF 551
Query: 412 -EKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRD 470
E E L HSE+LA+C+GL+ST + + + KNLR+C DCHS IK+ ++I KR+I+VRD
Sbjct: 552 EEVEQVLFTHSEKLALCFGLMSTPSSSPLCIFKNLRICQDCHSAIKIASDIYKREIVVRD 611
Query: 471 RNRFHHFENGTCSCGDYW 488
R RFH F+ G+CSC DYW
Sbjct: 612 RYRFHSFKQGSCSCSDYW 629
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 157/389 (40%), Gaps = 72/389 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRL--KLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINC 59
G ++H GL + S+ L L+ LY C A +LFD +P +
Sbjct: 31 GEQLHAAATVSGLLFSPSSFLLNALLHLYASCPLPSHARKLFDRIPHSH----------- 79
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
KD+V +TA L+R AL + +M++ + + V +
Sbjct: 80 -------------------KDSVDYTA----LIRCSHPLDALRFYLQMRQRALPLDGVAL 116
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE---- 175
+C L ACS+LG L +H + K + V +++ Y +CG + +A +VFE
Sbjct: 117 ICALGACSKLGDSNLVPQMHVGVVKFGFLRHTKVLNGVMDGYVKCGLVGEARRVFEEIEE 176
Query: 176 ---------------------------EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM 208
EM ER+ + LI G G + EA + +EM
Sbjct: 177 PSVVSWTVVLEGVVKCEGVESGKVVFDEMPERNEVAWTVLIKGYVGSGFTKEAFLLLKEM 236
Query: 209 I---NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSR 265
+ G +T VL+ACS G V +G + + G + + +VD+ ++
Sbjct: 237 VFGCGFGFGLNSITLCSVLSACSQSGDVSVGRWVHCYAVKAVGWDLGVMVGTSLVDMYAK 296
Query: 266 VGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLL 325
GR A +M + + ++L +HG ++ ++ +++ D+ T++ L
Sbjct: 297 CGRISAALMVFRHMP-RRNVVAWNAMLCGLAMHGMGKVVVEMFACMVEEVKPDAVTFMAL 355
Query: 326 SNAYASSGKWKEAVQIRAKMKEA-GVQKE 353
++ + SG ++ Q ++ A G++ E
Sbjct: 356 LSSCSHSGLVEQGWQYFHDLERAYGIRPE 384
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/460 (40%), Positives = 289/460 (62%), Gaps = 4/460 (0%)
Query: 32 GEFKDAMQLFDEMPECN---DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMI 88
G K + D + E N + S + + Y + G +++A +VFS +K KD + W MI
Sbjct: 468 GNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMI 527
Query: 89 DGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRID 148
G +N AL LF EMQR++ +P+ T+ C+L AC+ L AL+ GR IH Y ++
Sbjct: 528 GGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACASLAALDKGREIHGYALRNGYS 586
Query: 149 LNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM 208
+ V A+++MY +CG + A +F+ + +D+ ++ +IAG MHG EA+ F +M
Sbjct: 587 EDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQM 646
Query: 209 INQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGR 268
GI P +V+F+ +L ACSH GL+D G++IF M ++ IEP +EHY C+VDLL+R G
Sbjct: 647 RMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGN 706
Query: 269 PEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNA 328
+A+ FI M I PD + G+LL C+IH ++L E++A+R+ + ++G YVLL+N
Sbjct: 707 LVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANI 766
Query: 329 YASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQEL 388
YA + KW+E ++R K+ + G++K PGCS IE+ +I+ F+ GD PQ ++I ++ L
Sbjct: 767 YAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRL 826
Query: 389 KQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVC 448
+ +K EGYSP T L + ++ EKE AL HSE+LA+ +G+++ P TIRV KNLRVC
Sbjct: 827 RSKMKEEGYSPKTAYALLNADEREKEVALCGHSEKLAMAFGMLNLPPGKTIRVTKNLRVC 886
Query: 449 NDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
DCH M K ++ R+II+RD +RFHHF++G+CSC YW
Sbjct: 887 GDCHEMAKFMSKSASREIILRDSSRFHHFKDGSCSCRGYW 926
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 141/281 (50%), Gaps = 34/281 (12%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR++HG + KLG S + L+ Y + + A +LFDE+ + DV++ MI+ Y
Sbjct: 269 EGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTD-RDVISWNSMISGY 327
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V++GL + E+F ++ V +DL T+V
Sbjct: 328 VKNGLDDRGIEIFIKMLV------------------FGVDIDL-------------ATMV 356
Query: 121 CVLSACSQLGALELGRWIHSYMGK-HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V AC+ +G L LG+ +HSY K +D L++MYS+CGD++ A++VFE M E
Sbjct: 357 NVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDE 416
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+ V ++ S+I G G S A+++F EM ++G+ P +LNAC+ G + G +I
Sbjct: 417 KTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSG-KI 475
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
R+ +E + D+ ++ G ++A+D ++MK
Sbjct: 476 VHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMK 516
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 140/292 (47%), Gaps = 34/292 (11%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
+V + +++ Y + G + +A VF R+ K V WT+MI G VR G A+ LF EM+
Sbjct: 387 EVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMK 446
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
V P+ + +L+AC+ G L+ G+ +H Y+ ++ ++ N V AL +MY++CG +
Sbjct: 447 SRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMK 506
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A VF MK++DV ++N++I G + EA+ +F EM + +P T +L AC+
Sbjct: 507 DAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACA 565
Query: 229 HGGLVDLGFEIFQSMTRD------YGIEPQIEHY---GCIV------------DLLSRV- 266
+D G EI R+ Y ++ Y G +V DL+S
Sbjct: 566 SLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTV 625
Query: 267 --------GRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQI 307
G EA + M+ I PD + S+L AC G L G +I
Sbjct: 626 MIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKI 677
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 167/386 (43%), Gaps = 69/386 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR + + G+ + +KLV +Y KCG+ K+ +FD++ E
Sbjct: 168 DGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSES------------- 214
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++F W MI +G +++LF++M ++PN T
Sbjct: 215 ----------KIF---------LWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFS 255
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L + + +E GR +H + K + + V +LI+ Y + A ++F+E+ +R
Sbjct: 256 SILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDR 315
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++NS+I+G +G +E+F +M+ G+ T V V AC++ G + LG +
Sbjct: 316 DVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLH 375
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---------------------------- 272
+ ++ ++ ++D+ S+ G A
Sbjct: 376 SYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLS 435
Query: 273 ------YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV--L 324
+D + + + PD + S+L+AC I+G L+ G +I + + ++ ++V
Sbjct: 436 DGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSG-KIVHDYIRENNLETNSFVSNA 494
Query: 325 LSNAYASSGKWKEAVQIRAKMKEAGV 350
L++ YA G K+A + + MK+ V
Sbjct: 495 LTDMYAKCGSMKDAHDVFSHMKKKDV 520
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 34/197 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GREIHG L+ G ++ +V++Y KCG A LFD +P D+V+ TVMI Y
Sbjct: 572 KGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPN-KDLVSWTVMIAGY 630
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG + A++ F +M+ + P+EV+ +
Sbjct: 631 GMHGY-------------------------------GSEAINTFNQMRMTGIEPDEVSFI 659
Query: 121 CVLSACSQLGALELGRWIHSYMGKH-RIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
+L ACS G L+ G I + M K +I+ N ++++ +R G++ KA + + M
Sbjct: 660 SILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPI 719
Query: 179 ERDVTTYNSLIAGLAMH 195
+ D T + +L+ G +H
Sbjct: 720 KPDATIWGALLCGCRIH 736
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 81/161 (50%), Gaps = 15/161 (9%)
Query: 95 GEMARALDLFREMQRDNVRPNEVTIVC-VLSACSQLGALELGRWIHSYMGKHRIDLNHIV 153
G++ A++L Q N ++ C +L C++ ++ GR + S + + ++ I+
Sbjct: 131 GDLKNAMELLCSSQNSNF---DLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGIL 187
Query: 154 GGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGI 213
G L+ MY +CGD+ + VF+++ E + +N +I+ + G E++ +F++M+ GI
Sbjct: 188 GVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGI 247
Query: 214 RPTKVTFVGVLNACS-----------HGGLVDLGFEIFQSM 243
+P TF +L + HG + LGF + ++
Sbjct: 248 KPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTV 288
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/440 (43%), Positives = 284/440 (64%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D+ A +++ Y + GL++ A +F + VKDTV ++A++ G V+NG A +F++MQ
Sbjct: 374 DLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQ 433
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
NV P+ T+V ++ ACS L AL+ GR H + + + ALI+MY++CG ID
Sbjct: 434 ACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRID 493
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+ QVF M RD+ ++N++IAG +HG EA +F EM N G P VTF+ +L+ACS
Sbjct: 494 LSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACS 553
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLV G F M YG+ P++EHY C+VDLLSR G +EAY+FI +M + D +
Sbjct: 554 HSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVW 613
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+LL AC+++ + LG+++++ + + +G +VLLSN Y+++G++ EA ++R K
Sbjct: 614 VALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQ 673
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
G +K PGCS IE+N +H F+ GD HPQ +IY+++ + +K GY P T VL D+
Sbjct: 674 GFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDL 733
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
E+ EKE AL HSE+LAI YG++S TI V KNLRVC DCH++IK I+ + +R IIV
Sbjct: 734 EEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLLKRRAIIV 793
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD NRFHHF+NG CSCGD+W
Sbjct: 794 RDANRFHHFKNGQCSCGDFW 813
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 164/338 (48%), Gaps = 32/338 (9%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G +H ++ L SNR+++ KL + V+ T +++ Y
Sbjct: 246 QGTSVHAYRIRACLHSNRNSKSKLTD----------------------GVLLGTALLDMY 283
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV-RPNEVTI 119
+ G + A VF + ++ V W+A+I G V M +A LF+ M + + +I
Sbjct: 284 AKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSI 343
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
L AC+ L L +G +H+ + K + + G +L++MY++ G ID+A+ +F+EM
Sbjct: 344 ASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV 403
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+D +Y++L++G +GR+ EA +F++M + P T V ++ ACSH + G
Sbjct: 404 KDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCS 463
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
S+ G+ + ++D+ ++ GR + + + NM + D + ++++ IHG
Sbjct: 464 HGSVIIR-GLASETSICNALIDMYAKCGRIDLSRQ-VFNMMPSRDIVSWNTMIAGYGIHG 521
Query: 300 KLQLGEQIAKRLLDCRS----ADSGTYVLLSNAYASSG 333
LG++ L+ + D T++ L +A + SG
Sbjct: 522 ---LGKEATALFLEMNNLGFPPDGVTFICLLSACSHSG 556
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 144/296 (48%), Gaps = 20/296 (6%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALD--LFRE 106
D+ ST +++ YV+ + +A +F+ + +D V W AM+ G +G A+ L +
Sbjct: 159 DLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQ 218
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM----------GKHRIDLNHIVGGA 156
MQ +RPN T+V +L +Q GAL G +H+Y K ++ ++G A
Sbjct: 219 MQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTA 278
Query: 157 LINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG---I 213
L++MY++CG + A +VF+ M R+ T+++LI G + R +A +F+ M+ QG +
Sbjct: 279 LLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFL 338
Query: 214 RPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAY 273
PT + L AC+ + +G E ++ G+ + ++ + ++ G ++A
Sbjct: 339 SPTSIA--SALRACASLDHLRMG-EQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAI 395
Query: 274 DFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNA 328
M + D + +L+S +G+ + + K++ C D+ T V L A
Sbjct: 396 ALFDEMAVK-DTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPA 450
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 4/184 (2%)
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARA--LDLFREMQRDNVRPNEV 117
++ G + A +F ++ D + +I + A A L L+R M R V PN
Sbjct: 67 HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T L ACS L GR IH + + + V AL++MY +C + A +F M
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ--GIRPTKVTFVGVLNACSHGGLVDL 235
RD+ +N+++AG A HG AV M Q +RP T V +L + G +
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246
Query: 236 GFEI 239
G +
Sbjct: 247 GTSV 250
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/523 (38%), Positives = 298/523 (56%), Gaps = 37/523 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN------------- 48
G++IHG ++ N L ++Y KCGE + A LFD + + N
Sbjct: 174 GKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAK 233
Query: 49 ---------------------DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAM 87
D V + +I Y + G V+ A VFS K KD VCWTAM
Sbjct: 234 NGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAM 293
Query: 88 IDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRI 147
+ G +NG AL LF EM +++ P+ T+ V+S+C++L +L G+ +H +
Sbjct: 294 MVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGL 353
Query: 148 DLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
+ N +V ALI+MYS+CG ID A VF M R+V ++N++I G A +G +A+E+F
Sbjct: 354 NNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFEN 413
Query: 208 MINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
M+ Q +P VTF+G+L+AC H ++ G E F S+T +G+ P ++HY C+V+LL R G
Sbjct: 414 MLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTG 473
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSN 327
R E+A I NM PD ++ +LLS C G + E A+ L + + Y++LSN
Sbjct: 474 RIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSN 533
Query: 328 AYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQE 387
YAS G+WK+ +R MK V+K G S IE++NE+H F D HP+ E IY+K+
Sbjct: 534 MYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNM 593
Query: 388 LKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKP--YTTIRVVKNL 445
L ++ EG++P+T +VLHD+ + EK ++ HSE+LA+ +GLI KP + IR++KN+
Sbjct: 594 LIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIK-KPNGISPIRIIKNI 652
Query: 446 RVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
R+CNDCH +K + I R+II+RD NRFHHF G CSC D W
Sbjct: 653 RICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 148/288 (51%), Gaps = 9/288 (3%)
Query: 23 KLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTV 82
+L+ LY K G+ +DA LFD+M + D+ + +++ Y + G ++N F R+ +D+V
Sbjct: 63 QLLHLYAKFGKLRDAQNLFDKMLK-RDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSV 121
Query: 83 CWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM 142
+ I G N +L+LF+ MQR+ P E TIV +L+A +QL L G+ IH +
Sbjct: 122 SYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSI 181
Query: 143 GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAV 202
N + AL +MY++CG+I++A +F+ + ++++ ++N +I+G A +G+ + +
Sbjct: 182 IVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCI 241
Query: 203 EMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDL 262
+ +M G P +VT ++ A G VD +F E I + ++
Sbjct: 242 GLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFK-----EKDIVCWTAMMVG 296
Query: 263 LSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQI 307
++ GR E+A M I PD L S++S+C L G+ +
Sbjct: 297 YAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAV 344
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/487 (40%), Positives = 289/487 (59%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIHG +L+ G + + LV LY +CG+ A FD M E
Sbjct: 521 GKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEE--------------- 565
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K+ VCW MI+G +N ALD+F +M + P+E++I+
Sbjct: 566 -----------------KNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIG 608
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
L ACSQ+ AL LG+ +H + K + + V +LI+MY++CG ++++ +F+ + +
Sbjct: 609 ALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKG 668
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
T+N LI G +HG +A+E+F+ M N G RP VTF+ +L AC+H GLV G E
Sbjct: 669 EVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLG 728
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M +GI+P++EHY C+VD+L R GR EA + + + PD + SLLS+C+ + L
Sbjct: 729 QMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDL 788
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+GE++A +LL+ + YVL+SN YA GKW E ++R +MKE G+QK+ GCS IE+
Sbjct: 789 DIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEI 848
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
++ F++GD Q +I + EL++ + GY P T VLH++E+ EK L HS
Sbjct: 849 GGKVSRFLVGDESLLQSMKIQQTWIELEKKINKIGYKPDTSCVLHELEEDEKIKILRNHS 908
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GL++T TT+RV KNLR+C DCH+ IKL++ I KR+IIVRD RFHHF+NG
Sbjct: 909 EKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKIDKREIIVRDNKRFHHFKNGF 968
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 969 CSCGDYW 975
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 185/416 (44%), Gaps = 73/416 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCG----------------------------- 32
G HG LKLGL L+++Y KCG
Sbjct: 318 GMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTNEKNVISWNSMIGGYSKD 377
Query: 33 -EFKDAMQLFDEMP-----ECNDVVASTVMINCYVE---------------HG------L 65
+F+ A +L +M + N+V V+ C E HG L
Sbjct: 378 RDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDEL 437
Query: 66 VENAF--------------EVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN 111
V NAF VF ++ K W A+I G V+NG +ALDL+ M+
Sbjct: 438 VANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSG 497
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
+ P+ TI +LSAC++L +L G+ IH M ++ +L+ + +L+++Y +CG I A
Sbjct: 498 LEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAK 557
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
F+ M+E+++ +N++I G + + +A++MF +M++ I P +++ +G L ACS
Sbjct: 558 LFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVS 617
Query: 232 LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSL 291
+ LG E+ + + E ++D+ ++ G E++ + + + + + L
Sbjct: 618 ALRLGKELHCFAVKSHLTEHSFVTCS-LIDMYAKCGCMEQSQNIFDRVHLKGE-VTWNVL 675
Query: 292 LSACKIHGKLQLGEQIAKRLLDC-RSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
++ IHG + ++ K + + DS T++ L A +G E ++ +M+
Sbjct: 676 ITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQ 731
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 132/267 (49%), Gaps = 11/267 (4%)
Query: 16 SNRSTRLKLVELYGKCGEFKDA------MQLFDEMPEC-NDVVASTVMINCYVEHGLVEN 68
SN + + L CGE+K+ P NDVV T ++ Y +
Sbjct: 88 SNSKPKQLIGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYD 147
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPNEVTIVCVLSACS 127
+ VF+ + K+ W A++ G +RN A+ +F EM P+ T+ CV+ AC
Sbjct: 148 SCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACV 207
Query: 128 QLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNS 187
+ + LG +H + K ++ + VG ALI MY + G ++ A++VF++M +R++ ++NS
Sbjct: 208 GVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNS 267
Query: 188 LIAGLAMHGRSIEAVEMFREMIN--QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR 245
++ +G E+ +F+ ++N +G+ P T V V+ C+ G V LG +F +
Sbjct: 268 VMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGM-VFHGLAL 326
Query: 246 DYGIEPQIEHYGCIVDLLSRVGRPEEA 272
G+ +++ ++D+ S+ G EA
Sbjct: 327 KLGLCGELKVNSSLLDMYSKCGYLCEA 353
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 163/369 (44%), Gaps = 67/369 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +HG LK + S+ L+ +YGK G + A+++FD+MP+ N V ++VM C +
Sbjct: 215 GEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYAC-L 273
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
E+G+ E ++ +F GL+ NG+ + + P+ T+V
Sbjct: 274 ENGVFEESYGLFK---------------GLL-NGD-------------EGLMPDVATMVT 304
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V+ C++ G + LG H K + V +L++MYS+CG + +A +F+ E++
Sbjct: 305 VIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDT-NEKN 363
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREM-INQGIRPTKVTFVGVLNACS-----------H 229
V ++NS+I G + A E+ R+M + ++ +VT + VL C H
Sbjct: 364 VISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIH 423
Query: 230 GGLVDLGF-----EIFQSMTRDY--------------GIEPQ-IEHYGCIVDLLSRVGRP 269
G + GF + + Y G+E + + + ++ + G P
Sbjct: 424 GYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFP 483
Query: 270 EEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL-DCRSADSGTYVLL 325
+A D M+ + PD + SLLSAC L G++I +L + D + L
Sbjct: 484 RKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISL 543
Query: 326 SNAYASSGK 334
+ Y GK
Sbjct: 544 VSLYVQCGK 552
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/458 (41%), Positives = 287/458 (62%), Gaps = 10/458 (2%)
Query: 31 CGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDG 90
CG K+ ++ +DV + +I+ + + G E+A VF + D + W ++I G
Sbjct: 183 CGIIKEGLE--------SDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGG 234
Query: 91 LVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLN 150
+N AL+LF+ M+R + T+ VL AC+ L LELG H ++ K+ DL
Sbjct: 235 FAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDL- 293
Query: 151 HIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
I+ AL++MY +CG ++ AL+VF +MKERDV T++++I+GLA +G S EA+++F M +
Sbjct: 294 -ILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKS 352
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
G +P +T VGVL ACSH GL++ G+ F+SM + YGI+P EHYGC++DLL + G+ +
Sbjct: 353 SGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLD 412
Query: 271 EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYA 330
+A + M+ PD + +LL AC++ + L E AK+++ D+GTY LLSN YA
Sbjct: 413 DAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYA 472
Query: 331 SSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQ 390
+S KW +IR +M++ G++KEPGCS IEVN +IH FI+GD HPQ ++ KK+ +L
Sbjct: 473 NSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIH 532
Query: 391 IVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCND 450
+ GY P T VL D+E + E +L HSE+LA+ +GL++ IR+ KNLR+C D
Sbjct: 533 RLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGD 592
Query: 451 CHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
CH KL + + R I++R R+HHF++G CSCGDYW
Sbjct: 593 CHVFCKLASKLEIRSIVIRGPIRYHHFQDGKCSCGDYW 630
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 133/258 (51%), Gaps = 7/258 (2%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
V+IN YV+ L+ +A ++F ++ ++ + WT MI + +AL+L M RDNVR
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
PN T VL +C+ + + R +H + K ++ + V ALI+++++ G+ + AL V
Sbjct: 160 PNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 216
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV 233
F+EM D +NS+I G A + RS A+E+F+ M G + T VL AC+ L+
Sbjct: 217 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 276
Query: 234 DLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLS 293
+LG + + + + + +VD+ + G E+A MK D I +++S
Sbjct: 277 ELGMQAHVHIVK---YDQDLILNNALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMIS 332
Query: 294 ACKIHGKLQLGEQIAKRL 311
+G Q ++ +R+
Sbjct: 333 GLAQNGYSQEALKLFERM 350
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/483 (39%), Positives = 296/483 (61%), Gaps = 32/483 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H ++K L N L+++Y KC +DA DV
Sbjct: 535 GRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDA-----------DVA---------- 573
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
F+R+ V+D WT +I + + +AL+ FR+MQ++ V+PNE T+
Sbjct: 574 -----------FNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAG 622
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
LS CS L +LE G+ +HS + K + VG AL++MY++CG +++A +FE + RD
Sbjct: 623 CLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRD 682
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+N++I G A +G+ +A+ FR M+++GI P VTF G+L+ACSH GLV+ G E F
Sbjct: 683 TIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFN 742
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM RD+GI P ++H C+VD+L RVG+ +E DFI M+++ + ++ ++L A K+H L
Sbjct: 743 SMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNL 802
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
LGE+ A +L + + + +Y+LLSN +A+ G+W + ++R+ M GV+KEPGCS +E
Sbjct: 803 VLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEA 862
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N ++H F+ D HPQ ++I+ K+ EL + + Y P TE VLH++ + EK+ L HS
Sbjct: 863 NGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHS 922
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ERLA+ + LIST IR+ KNLR+C DCH ++K I++IT ++I+VRD RFHHF+NG
Sbjct: 923 ERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGA 982
Query: 482 CSC 484
CSC
Sbjct: 983 CSC 985
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 140/290 (48%), Gaps = 43/290 (14%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
++N Y + A V +++ +D V WTA+I GLV G ++ LF+EMQ + + PN
Sbjct: 153 LVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPN 212
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
E T+ L ACS AL+LG+ +H+ K + L+ VG AL+++Y++CG+I+ A ++F
Sbjct: 213 EFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFI 272
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG----- 230
M E++ T+N L+ G A G +++F M+ ++ + T VL C++
Sbjct: 273 GMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQ 332
Query: 231 ---------------------GLVDL---------GFEIFQSMTRDYGIEPQIEHYGCIV 260
GLVD+ +F+++ + P I + ++
Sbjct: 333 GQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKK-----PDIVVWSALI 387
Query: 261 DLLSRVGRPEEAYDFITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQI 307
L + G+ EE+ M++ P+ + SLLSA G LQ G+ I
Sbjct: 388 TCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSI 437
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 127/266 (47%), Gaps = 33/266 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H Q KLGL + LV+LY KCGE + A ++F MPE NDV
Sbjct: 232 GKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVT---------- 281
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
W +++G + G++ L LF M +V+ NE T+
Sbjct: 282 ----------------------WNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTT 319
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL C+ L+ G+ IHS + K + N +G L++MYS+CG A+ VF+ +K+ D
Sbjct: 320 VLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPD 379
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ +++LI L G+S E++++F M P + T +L+A ++ G + G I
Sbjct: 380 IVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHA 439
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVG 267
+ + YG E + +V + + G
Sbjct: 440 CVWK-YGFETDVAVSNALVTMYMKNG 464
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 137/292 (46%), Gaps = 35/292 (11%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV S ++ Y+++G V + +++ + +D + W A + GL G R L +F M
Sbjct: 449 DVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHML 508
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ PN T + +L +CS L + GR +H+++ K+++D N+ V ALI+MY++C ++
Sbjct: 509 EEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLE 568
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A F + RD+ T+ +I A + +A+ FR+M +G++P + T G L+ CS
Sbjct: 569 DADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCS 628
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEE----------------- 271
++ G ++ SM G + +VD+ ++ G EE
Sbjct: 629 SLASLEGGQQL-HSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWN 687
Query: 272 -----------------AYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQ 306
A+ + + I+PD + +LSAC G ++ G++
Sbjct: 688 TIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKE 739
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 158/372 (42%), Gaps = 66/372 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ IH ++K G N LV++Y KCG DA+ +F + + D+V + +I C
Sbjct: 332 QGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKK-PDIVVWSALITCL 390
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ G E + ++F +++ DT+ PN+ TI
Sbjct: 391 DQQGQSEESIKLFHLMRLGDTL-------------------------------PNQYTIC 419
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+LSA + G L+ G+ IH+ + K+ + + V AL+ MY + G + +++E M +R
Sbjct: 420 SLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDR 479
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D+ ++N+ ++GL G + +F M+ +G P TF+ +L +CS V G ++
Sbjct: 480 DLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVH 539
Query: 241 QSMTR------DYGIEPQIEHYG------------------------CIVDLLSRVGRPE 270
+ + ++ I+ Y I+ ++ + E
Sbjct: 540 AHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGE 599
Query: 271 EAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC-RSADSGTYVLLS 326
+A ++ M+ + P+ L LS C L+ G+Q+ + +D L
Sbjct: 600 KALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALV 659
Query: 327 NAYASSGKWKEA 338
+ YA G +EA
Sbjct: 660 DMYAKCGCMEEA 671
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 91/185 (49%), Gaps = 4/185 (2%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L C+ +L + + IH + K I+ + + +L+N+Y++C A V +M +RD
Sbjct: 118 MLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRD 177
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ +LI GL G + +++ +F+EM N+GI P + T L ACS +DLG ++
Sbjct: 178 VVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQM-H 236
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPD---HIMLGSLLSACKIH 298
+ G+ + +VDL ++ G E A M D +++L +
Sbjct: 237 AQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVT 296
Query: 299 GKLQL 303
G L+L
Sbjct: 297 GVLKL 301
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/438 (42%), Positives = 292/438 (66%), Gaps = 5/438 (1%)
Query: 55 VMINCYVEHGL--VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR--D 110
M++ Y + G +E A +VF ++ +D V W +MI +NG A A+ L+ +M
Sbjct: 237 TMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGG 295
Query: 111 NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
++ N V + VL AC+ GA++ G+ IH+ + + ++ N VG ++++MYS+CG ++ A
Sbjct: 296 GIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMA 355
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
+ F ++KE+++ +++++I G MHGR EA+E+F EM G+RP +TF+ VL ACSH
Sbjct: 356 SRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHA 415
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGS 290
GL+D G + +M +++GIE +EHYGC+VDLL R G +EAY I MK+ PD + G+
Sbjct: 416 GLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGA 475
Query: 291 LLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
LLSAC+IH ++L E KRL + +++SG YVLLSN YA + WK+ +IR +K +
Sbjct: 476 LLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLVKTRRI 535
Query: 351 QKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIED 410
+K PG SS E+ +I+ F +GD HPQ +IY +++L + ++ GY P+T VLHD+++
Sbjct: 536 EKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDE 595
Query: 411 WEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRD 470
EKE AL IHSE+LA+ + L+++ P + I ++KNLRVC+DCH+ +K I IT+R+II+RD
Sbjct: 596 EEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITEREIIIRD 655
Query: 471 RNRFHHFENGTCSCGDYW 488
RFHHF++G CSC DYW
Sbjct: 656 LQRFHHFKDGLCSCRDYW 673
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 149/342 (43%), Gaps = 75/342 (21%)
Query: 4 EIHGQVLKLGL-RSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
++H L+ GL S+ + L+ +Y C DA + FDE+P+ N V+
Sbjct: 114 QLHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIV---------- 163
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP--NEVTIV 120
TAM G VRN + +L+LFR M + +E +
Sbjct: 164 ----------------------TAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAAL 201
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG--DIDKALQVFEEMK 178
SA +++ + +H+ + K + N V +++ Y++ G D++ A +VF+ M
Sbjct: 202 VAFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM- 260
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN--QGIRPTKVTFVGVLNACSHGGLVDLG 236
ERDV ++NS+IA A +G S EA+ ++ +M+N GI+ V VL AC+H G + G
Sbjct: 261 ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTG 320
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE-------------------------- 270
I + R G+E + IVD+ S+ GR E
Sbjct: 321 KRIHNQVVR-MGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGM 379
Query: 271 -----EAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLG 304
EA + T MK + P++I S+L+AC G L G
Sbjct: 380 HGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEG 421
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 35/205 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ IH QV+++GL N +V++Y KCG + A + F ++ E N +++ + MI Y
Sbjct: 320 GKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKN-ILSWSAMITGYG 378
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG + A E+F+ EM+R +RPN +T +
Sbjct: 379 MHGRGQEALEIFT-------------------------------EMKRSGLRPNYITFIS 407
Query: 122 VLSACSQLGALELGR-WIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL+ACS G L+ GR W ++ + I+ G ++++ R G +D+A + +EMK +
Sbjct: 408 VLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVK 467
Query: 181 -DVTTYNSLIAGLAMHGRSIEAVEM 204
D + +L++ +H +++E EM
Sbjct: 468 PDAAIWGALLSACRIH-KNVELAEM 491
>gi|297739678|emb|CBI29860.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/483 (41%), Positives = 295/483 (61%), Gaps = 33/483 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+++H VLK G S+ LV Y KC + A ++FDE+ +
Sbjct: 179 EGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITD-------------- 224
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++ V W+ MI G R G + AL LFR+MQ+ V P+EVT+V
Sbjct: 225 ------------------RNLVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMV 266
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+SAC+ GAL+ G+W+H+Y+ K I+ + + AL+NMY++CG I++A +VF+ M +
Sbjct: 267 SVISACAASGALDTGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVK 326
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++S+I GLA++G + +A+E F M ++P VTF+GVL+AC+H GLV G +
Sbjct: 327 DTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYW 386
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM ++GI P +E YGC+VDLL R E+A + M I+P+ ++ +LL CK
Sbjct: 387 SSML-EFGIVPSMELYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKN 445
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
L E +A+RLL+ ++ Y+LLSN YAS +W++ Q+R KMK G++ PGCSSIE
Sbjct: 446 LDKSEVVAQRLLELEPHNAENYILLSNLYASMSQWEKMSQVRKKMKGMGIKAVPGCSSIE 505
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
V+ +HEF++GD HP+ ++ + ++++ + V G+ P VLH++ D EKE AL H
Sbjct: 506 VDGLVHEFVMGDWSHPEAMEVREILRDISKRVHAVGHQPGISDVLHNVVDEEKENALCEH 565
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLAI YGL+ TK IR+VKNLRVC DCH + K+I+ +R+IIVRDR RFH F NG
Sbjct: 566 SERLAIAYGLLKTKTPMAIRIVKNLRVCGDCHEVTKIISAEYRREIIVRDRVRFHKFVNG 625
Query: 481 TCS 483
+CS
Sbjct: 626 SCS 628
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 156/291 (53%), Gaps = 5/291 (1%)
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMAR-ALDLFREM-QRDNVRPNEVTIV 120
+G ++ A ++FS+++ + W +MI G ++ ++ + LFR+M +R PN T+
Sbjct: 106 YGDIDYARKLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMA 165
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL ACS + ALE G+ +H+ + K + V AL+N Y++C DI A +VF+E+ +R
Sbjct: 166 FVLKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDR 225
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
++ ++++I+G A G EA+ +FR+M G+ P +VT V V++AC+ G +D G +
Sbjct: 226 NLVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVH 285
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ + IE +E +V++ ++ G E A + M + D S++ I+G
Sbjct: 286 AYINKQL-IETDLELSTALVNMYAKCGCIERAKEVFDAMPVK-DTKAWSSMIVGLAINGL 343
Query: 301 LQLGEQIAKRLLDCR-SADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
+ + R+ + + + T++ + +A A SG E + + M E G+
Sbjct: 344 AEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSMLEFGI 394
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 179/438 (40%), Positives = 277/438 (63%)
Query: 51 VASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD 110
+ + +I+ Y + G ++ A VFS++ KD V WT+++ G NG A+ LF +M+
Sbjct: 77 LVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRIS 136
Query: 111 NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
V P+++ + VLSAC++L ++ G+ IH+ + K ++ + V +L+ MY++CG I A
Sbjct: 137 GVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDA 196
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
+ F+ M RDV ++ +LI G A +GR +++ + +MI G +P +TF+G+L ACSH
Sbjct: 197 NRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHN 256
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGS 290
GL+ G F++M + YGI+P EHY C++DLL R G+ EA + M +APD ++ +
Sbjct: 257 GLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVVAPDAVVWKA 316
Query: 291 LLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
LL+AC++H +L+LGE AK L + +S YV+LSN Y+++GKW++A +IR M+ G+
Sbjct: 317 LLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDAARIRRLMRSRGI 376
Query: 351 QKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIED 410
KEPG S IE N+++ F+ D HP R +IY K+ E+ ++K GY P LHD +D
Sbjct: 377 CKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKEAGYVPDMSFALHDTDD 436
Query: 411 WEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRD 470
KE LA HSE+LA+ +GL++ IR+ KNLRVC DCH+ +K + + R II+RD
Sbjct: 437 EVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGDCHTAMKYTSKVYARHIILRD 496
Query: 471 RNRFHHFENGTCSCGDYW 488
N FHHF G CSCGDYW
Sbjct: 497 SNCFHHFTEGRCSCGDYW 514
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 35/205 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G++IH ++K GL S+ S LV +Y KCG DA + FD MP DV++
Sbjct: 161 GQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMPT-RDVIS--------- 210
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
WTA+I G +NG +L + +M +P+ +T +
Sbjct: 211 ----------------------WTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIG 248
Query: 122 VLSACSQLGALELGRWIHSYMGK-HRIDLNHIVGGALINMYSRCGDIDKALQVFEEM-KE 179
+L ACS G L GR M K + I +I++ R G + +A + +M
Sbjct: 249 LLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVVA 308
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEM 204
D + +L+A +H + +E EM
Sbjct: 309 PDAVVWKALLAACRVH-KELELGEM 332
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 33/169 (19%)
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-------- 228
M+ D ++NSLI G G +A+ F++M ++ ++ + T VLN+ +
Sbjct: 1 MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNA 60
Query: 229 ---HGGLVDLGFEIFQS-------------------MTRDYGIEPQIEHYGCIVDLLSRV 266
H ++ GFE ++ M ++ + + +V S
Sbjct: 61 ISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHN 120
Query: 267 GRPEEAYDFITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
G EEA M+I+ PD I + S+LSAC + G+QI L+
Sbjct: 121 GSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLV 169
>gi|45935146|gb|AAS79604.1| putative pentatricopeptide repeat-containing protein [Ipomoea
trifida]
gi|118562903|dbj|BAF37793.1| hypothetical protein [Ipomoea trifida]
Length = 575
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/489 (40%), Positives = 293/489 (59%), Gaps = 35/489 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G++IHG V K G+ S+R L+ LY GE P
Sbjct: 120 GKQIHGLVFKSGVGSDRYINNALIHLYSVSGE-----------PNL-------------- 154
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
A++VF ++ +D V WT++IDG V N A+ LF M + + PNEVT+
Sbjct: 155 -------AYKVFDKMPDRDVVSWTSIIDGFVDNDRPIEAIRLFTHMIENGIEPNEVTVAS 207
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL AC+ GAL G IHS++ + N V ALI+MY++CG ID AL+VF+E E+D
Sbjct: 208 VLRACADTGALNTGERIHSFVKEKNFSSNANVSTALIDMYAKCGCIDGALEVFDETLEKD 267
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V + ++IAGLA HG ++A+E F M ++ + VL+A + GLV G F+
Sbjct: 268 VYVWTAIIAGLASHGLCMKAIEFFENMKKSDVKMDERAITAVLSAYRNAGLVSEGLLFFR 327
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+ + + I+P I+HYGC+VD+L+R GR ++A +FI M I PD ++ +L+ CKI G +
Sbjct: 328 RLKK-HKIKPTIQHYGCVVDMLTRAGRLKDAEEFIRKMPIEPDAVLWRTLIWGCKILGDV 386
Query: 302 QLGEQIAKRL--LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+ E++ + L L+ S D+G+YVLL N YA++GKW+E + R M + G+ K P CS I
Sbjct: 387 ERSERLVRELELLNMDSRDTGSYVLLENVYAATGKWEEKAKTRELMYQRGLMKPPACSRI 446
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E++ +HEF GD RH + +Y+K++++++ ++ EGY+P VL +I+D EK L
Sbjct: 447 EIDGVVHEFTAGDSRHDEATAVYEKLEDVEERLRGEGYNPIVSEVLLEIDDDEKASQLLH 506
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LA+ +GL+ + P + IR+VKNLR C DCHS +KLI+ + +R IIVRDR RFHHF
Sbjct: 507 HSEKLAVSFGLVKSSPGSVIRIVKNLRSCEDCHSFMKLISKVYQRDIIVRDRIRFHHFSG 566
Query: 480 GTCSCGDYW 488
G CSCGD W
Sbjct: 567 GNCSCGDRW 575
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 140/298 (46%), Gaps = 15/298 (5%)
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN------VRPNEV 117
G + A + + ++ + MI + + RA LF MQ + RP+
Sbjct: 43 GDLNYARHILRTLHTPNSFYYNTMIRAYSDSTDPTRAFTLFLYMQNPDDASVAVPRPDHF 102
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T VL ACS+ G G+ IH + K + + + ALI++YS G+ + A +VF++M
Sbjct: 103 TYPFVLKACSKSGHARFGKQIHGLVFKSGVGSDRYINNALIHLYSVSGEPNLAYKVFDKM 162
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
+RDV ++ S+I G + R IEA+ +F MI GI P +VT VL AC+ G ++ G
Sbjct: 163 PDRDVVSWTSIIDGFVDNDRPIEAIRLFTHMIENGIEPNEVTVASVLRACADTGALNTG- 221
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
E S ++ ++D+ ++ G + A + + + + D + ++++
Sbjct: 222 ERIHSFVKEKNFSSNANVSTALIDMYAKCGCIDGALE-VFDETLEKDVYVWTAIIAGLAS 280
Query: 298 HG----KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
HG ++ E + K D + + +LS AY ++G E + ++K+ ++
Sbjct: 281 HGLCMKAIEFFENMKKS--DVKMDERAITAVLS-AYRNAGLVSEGLLFFRRLKKHKIK 335
>gi|115473893|ref|NP_001060545.1| Os07g0662700 [Oryza sativa Japonica Group]
gi|24414187|dbj|BAC22429.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113612081|dbj|BAF22459.1| Os07g0662700 [Oryza sativa Japonica Group]
gi|125559498|gb|EAZ05034.1| hypothetical protein OsI_27217 [Oryza sativa Indica Group]
gi|125601406|gb|EAZ40982.1| hypothetical protein OsJ_25464 [Oryza sativa Japonica Group]
Length = 544
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/518 (39%), Positives = 306/518 (59%), Gaps = 38/518 (7%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
+H ++KLGL+ L++ Y G DA ++FD M D V+ MI+ + G
Sbjct: 31 LHALLVKLGLQPYARVHNALIQAYAASGLVDDARRVFDGMSH-RDTVSFNSMIHAHAMSG 89
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMA-------------------------- 98
V +A +F RV V WT+M+ GL R G++A
Sbjct: 90 DVVSARRLFERVPSPTPVTWTSMVAGLCRAGDVAAARRLFEEMPVRDLVSWNAMMSGLAG 149
Query: 99 -----RALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRID--LNH 151
AL LFR M + PN T++ L+AC+ GALE G+WIH+++ + R+ +
Sbjct: 150 NRRPVEALCLFRRMMAEGFAPNRGTVLSALAACAGAGALETGKWIHAFVERKRLFRWWDE 209
Query: 152 IVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM-IN 210
+G AL++MY++CG ++ AL VF +++ R+ T+N++I GLAM+G S +A++MFR+M ++
Sbjct: 210 FLGTALLDMYAKCGAVELALDVFTKLRSRNTCTWNAMINGLAMNGYSAKALDMFRKMELD 269
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
+ + P +VTFVGVL ACSHGG VD+G E F + + YGI +EHY C+VDLL+R G +
Sbjct: 270 RTVVPDEVTFVGVLLACSHGGFVDVGREHFHMIEKKYGIRLILEHYACMVDLLARSGHLQ 329
Query: 271 EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYA 330
EA+ I M + PD ++ +LL C++H +++ E + + SG +VLLSN YA
Sbjct: 330 EAHKIIAGMPMKPDAVVWRALLGGCRLHKDVKMAETAISEM---EATCSGDHVLLSNLYA 386
Query: 331 SSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQ 390
+ G+W +R M+ G++K PGCSSIE+N+ IHEF+ GD HP I+ K+ E+
Sbjct: 387 AVGRWSGVEDVRRTMRSKGIEKIPGCSSIEINDSIHEFVSGDKSHPSYNDIHAKLAEISA 446
Query: 391 IVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCND 450
++ +GY T V +D+E+ EKE AL HSE+LAI +GLI P IR+VKNLR C D
Sbjct: 447 RMQQQGYVTETAEVFYDVEEEEKEQALGHHSEKLAIAFGLIGGPPNVAIRIVKNLRFCAD 506
Query: 451 CHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
CH KL++ I +I+VRDR RFHHF G CSC D+W
Sbjct: 507 CHKFAKLVSQIYHWEIVVRDRARFHHFTEGACSCNDFW 544
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/439 (42%), Positives = 287/439 (65%), Gaps = 3/439 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DVV ++N Y + G + A VF ++ KDT+ W ++ G +NG + A+D + M+
Sbjct: 358 DVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMME 417
Query: 109 --RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
RD + PN+ T V ++ A S +GAL+ G IH+ + K+ + L+ V LI++Y +CG
Sbjct: 418 ECRDTI-PNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGR 476
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
++ A+ +F E+ +N++IA L +HGR EA+++F++M+ + ++ +TFV +L+A
Sbjct: 477 LEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSA 536
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
CSH GLVD G + F M ++YGI+P ++HYGC+VDLL R G E+AY+ + NM I PD
Sbjct: 537 CSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDAS 596
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
+ G+LLSACKI+G +LG + RLL+ S + G YVLLSN YA++ KW+ +++R+ +
Sbjct: 597 IWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLAR 656
Query: 347 EAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH 406
+ G++K PG SS+ V ++ F G+ HP+ +IYK+++ L +K GY P V
Sbjct: 657 DRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQ 716
Query: 407 DIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKI 466
DIE+ EKE L HSERLAI +G+IST P + IR+ KNLRVC DCH+ K I+ I++R+I
Sbjct: 717 DIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISRISEREI 776
Query: 467 IVRDRNRFHHFENGTCSCG 485
+VRD NRFHHF++G CSC
Sbjct: 777 VVRDSNRFHHFKDGICSCA 795
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 175/362 (48%), Gaps = 41/362 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G IH VLK GL S+ L+ +Y K G +DA +FD+M
Sbjct: 241 GVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQM----------------- 283
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+V+D V W ++I +N + + AL F+ MQ +RP+ +T+V
Sbjct: 284 ---------------EVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVS 328
Query: 122 VLSACSQLGALELGRWIHSYMGKHR-IDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+ S SQL + R I ++ + +D + ++G AL+NMY++ G ++ A VF+++ +
Sbjct: 329 LTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRK 388
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMIN-QGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
D ++N+L+ G +G + EA++ + M + P + T+V ++ A SH G + G +I
Sbjct: 389 DTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKI 448
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+ ++ + + C++DL + GR E+A + + +++++ IHG
Sbjct: 449 HAKLIKN-SLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIP-RDTSVPWNAIIASLGIHG 506
Query: 300 KLQLGEQIAKRLLDCR-SADSGTYVLLSNAYASSGKWKEAVQIRAKM-KEAGVQ---KEP 354
+ + Q+ K +L R AD T+V L +A + SG E + M KE G++ K
Sbjct: 507 RGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHY 566
Query: 355 GC 356
GC
Sbjct: 567 GC 568
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 150/300 (50%), Gaps = 3/300 (1%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+DV + +++ Y +G+++ A +VF + VKD W AMI G +NG A AL + M
Sbjct: 154 DDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRM 213
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ + V+ + +T+ +L C+Q + G IH ++ KH +D + V ALINMYS+ G +
Sbjct: 214 KGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRL 273
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A VF++M+ RD+ ++NS+IA + A+ F+ M GIRP +T V + +
Sbjct: 274 QDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIF 333
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
S + I + R ++ + +V++ +++G A+ + D I
Sbjct: 334 SQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLP-RKDTIS 392
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSA--DSGTYVLLSNAYASSGKWKEAVQIRAKM 345
+L++ +G + +CR + GT+V + AY+ G ++ ++I AK+
Sbjct: 393 WNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKL 452
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 128/253 (50%), Gaps = 9/253 (3%)
Query: 46 ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALD--- 102
+ ++V ST +IN YV HG + + F + K+ W ++I VR G+ A++
Sbjct: 50 KSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVN 109
Query: 103 -LFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMY 161
LF ++RP+ T +L AC L G+ +H + K + + V +L+++Y
Sbjct: 110 QLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLY 166
Query: 162 SRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFV 221
SR G +D A +VF +M +DV ++N++I+G +G + A+ + M +G++ +T
Sbjct: 167 SRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVA 226
Query: 222 GVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKI 281
+L C+ V G I + + +G++ + ++++ S+ GR ++A M++
Sbjct: 227 SILPVCAQSDDVINGVLIHLHVLK-HGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEV 285
Query: 282 APDHIMLGSLLSA 294
D + S+++A
Sbjct: 286 R-DLVSWNSIIAA 297
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 40/203 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G +IH +++K L + L++LYGKCG +DAM LF E+P
Sbjct: 444 QGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIP--------------- 488
Query: 61 VEHGLVENAFEVFSRVKVKDT-VCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
+DT V W A+I L +G AL LF++M + V+ + +T
Sbjct: 489 ------------------RDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITF 530
Query: 120 VCVLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
V +LSACS G ++ G+ M K + L H G ++++ R G ++KA ++
Sbjct: 531 VSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHY--GCMVDLLGRAGYLEKAYELVRN 588
Query: 177 MK-ERDVTTYNSLIAGLAMHGRS 198
M + D + + +L++ ++G +
Sbjct: 589 MPIQPDASIWGALLSACKIYGNA 611
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/479 (39%), Positives = 295/479 (61%), Gaps = 3/479 (0%)
Query: 13 GLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMINCYVEHGLVENA 69
GL +T ++ + + K +L M + D +I+ Y + G+++NA
Sbjct: 307 GLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNA 366
Query: 70 FEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQL 129
+ KDTV ++A+I G V+NG +AL +FR+MQ + P T++ +L ACS L
Sbjct: 367 VGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHL 426
Query: 130 GALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLI 189
AL+ G H Y + + A+I+MYS+CG I + ++F+ M+ RD+ ++N++I
Sbjct: 427 AALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMI 486
Query: 190 AGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGI 249
G +HG +EA+ +F+E+ G++P VT + VL+ACSH GLV G F SM++++ I
Sbjct: 487 IGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNI 546
Query: 250 EPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAK 309
+P++ HY C+VDLL+R G +EAY FI M P+ + G+LL+AC+ H +++GEQ++K
Sbjct: 547 KPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSK 606
Query: 310 RLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFI 369
++ +G +VL+SN Y+S G+W +A IR+ + G +K PGCS +E++ IH FI
Sbjct: 607 KIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFI 666
Query: 370 LGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYG 429
G HPQ I KK+QEL +K GY + VLHD+E+ EKE L HSE++AI +G
Sbjct: 667 GGHQSHPQSASINKKLQELLVQMKKLGYRADSSFVLHDVEEEEKEQILLYHSEKVAIAFG 726
Query: 430 LISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
+++T P + I V KNLR+C DCHS IK I +T+R+I VRD +RFHHF++G C+C D+W
Sbjct: 727 ILNTSPSSRILVTKNLRICVDCHSAIKFITLLTEREITVRDASRFHHFKDGICNCQDFW 785
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 161/313 (51%), Gaps = 24/313 (7%)
Query: 1 EGREIH--GQVLKLGLRSNRSTRLKLVELYGKCGEF---KDAMQLFDEMPECNDVVASTV 55
+ IH Q+ + G+ N ST + ++ G+ K + ++VV T
Sbjct: 191 HAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTA 250
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ-RDNVRP 114
+++ Y + L+ A ++F+ V K+ VCW+AMI G V + ++ AL L+ +M + P
Sbjct: 251 LLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNP 310
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
T+ +L AC+QL L+ G+ +H +M K +DL+ VG +LI+MY++CG +D A+
Sbjct: 311 TPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFL 370
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH----- 229
+EM +D +Y+++I+G +G + +A+ +FR+M + GI P T + +L ACSH
Sbjct: 371 DEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQ 430
Query: 230 GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGR---PEEAYDFITNMKIAPDHI 286
G G+ + + T D I I+D+ S+ G+ E +D + N I I
Sbjct: 431 HGTCCHGYTVVRGFTNDTSI------CNAIIDMYSKCGKITISREIFDRMQNRDI----I 480
Query: 287 MLGSLLSACKIHG 299
+++ IHG
Sbjct: 481 SWNTMIIGYGIHG 493
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 133/299 (44%), Gaps = 33/299 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR IH LGL + L+ +Y KCG A LF+ +
Sbjct: 126 GRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISH--------------- 170
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ +D V W AMI + A+ + +MQ+ V PN T+V
Sbjct: 171 ---------------QDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVS 215
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L Q AL G+ IH+Y ++ N ++ AL++MY++C + A ++F + +++
Sbjct: 216 ILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKN 275
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMIN-QGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
++++I G +H +A+ ++ +M+ G+ PT T +L AC+ + G ++
Sbjct: 276 DVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLH 335
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
M + G++ ++ + ++ G + A F+ M IA D + +++S C +G
Sbjct: 336 CHMIKS-GMDLDTTVGNSLISMYAKCGIMDNAVGFLDEM-IAKDTVSYSAIISGCVQNG 392
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 2/198 (1%)
Query: 52 ASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN 111
A+T + ++ ++ A VF ++ V W MI +G +++ L+ M +
Sbjct: 43 AATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLG 102
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
V P T +L ACS L AL+LGR IH++ + ++ V AL++MY++CG + +A
Sbjct: 103 VTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQ 162
Query: 172 QVFEEM--KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH 229
+F + ++RD+ +N++IA + H + + +M G+ P T V +L
Sbjct: 163 TLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQ 222
Query: 230 GGLVDLGFEIFQSMTRDY 247
+ G I R++
Sbjct: 223 ANALHQGKAIHAYYIRNF 240
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%)
Query: 145 HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEM 204
HR+ + L + +I A VF+++ + V +N +I A G +++ +
Sbjct: 35 HRVSDSDAAATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYL 94
Query: 205 FREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
+ M+ G+ PT TF +L ACS + LG
Sbjct: 95 YLHMLQLGVTPTNFTFPFLLKACSSLQALQLG 126
>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
Length = 674
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/438 (42%), Positives = 292/438 (66%), Gaps = 5/438 (1%)
Query: 55 VMINCYVEHGL--VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR--D 110
M++ Y + G +E A +VF ++ +D V W +MI +NG A A+ L+ +M
Sbjct: 238 TMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGG 296
Query: 111 NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
++ N V + VL AC+ GA++ G+ IH+ + + ++ N VG ++++MYS+CG ++ A
Sbjct: 297 GIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMA 356
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
+ F ++KE+++ +++++I G MHGR EA+E+F EM G+RP +TF+ VL ACSH
Sbjct: 357 SRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHA 416
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGS 290
GL+D G + +M +++GIE +EHYGC+VDLL R G +EAY I MK+ PD + G+
Sbjct: 417 GLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGA 476
Query: 291 LLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
LLSAC+IH ++L E KRL + +++SG YVLLSN YA + WK+ +IR +K +
Sbjct: 477 LLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLVKTRRI 536
Query: 351 QKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIED 410
+K PG SS E+ +I+ F +GD HPQ +IY +++L + ++ GY P+T VLHD+++
Sbjct: 537 EKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDE 596
Query: 411 WEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRD 470
EKE AL IHSE+LA+ + L+++ P + I ++KNLRVC+DCH+ +K I IT+R+II+RD
Sbjct: 597 EEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITEREIIIRD 656
Query: 471 RNRFHHFENGTCSCGDYW 488
RFHHF++G CSC DYW
Sbjct: 657 LQRFHHFKDGLCSCRDYW 674
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 35/205 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ IH QV+++GL N +V++Y KCG + A + F ++ E N +++ + MI Y
Sbjct: 321 GKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKN-ILSWSAMITGYG 379
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG + A E+F+ EM+R +RPN +T +
Sbjct: 380 MHGRGQEALEIFT-------------------------------EMKRSGLRPNYITFIS 408
Query: 122 VLSACSQLGALELGR-WIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VL+ACS G L+ GR W ++ + I+ G ++++ R G +D+A + +EMK +
Sbjct: 409 VLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVK 468
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEM 204
D + +L++ +H +++E EM
Sbjct: 469 PDAAIWGALLSACRIH-KNVELAEM 492
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 42/255 (16%)
Query: 90 GLVRNGEMARALDLFREMQRDNVRP--NEVTIVCVLSACSQLGALELGRWIHSYMGKHRI 147
G VRN + +L+LFR M + +E + SA +++ + +H+ + K
Sbjct: 170 GYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGF 229
Query: 148 DLNHIVGGALINMYSRCG--DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMF 205
+ N V +++ Y++ G D++ A +VF+ M ERDV ++NS+IA A +G S EA+ ++
Sbjct: 230 ERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLY 288
Query: 206 REMIN--QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
+M+N GI+ V VL AC+H G + G I + R G+E + IVD+
Sbjct: 289 SKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVR-MGLEENVYVGTSIVDMY 347
Query: 264 SRVGRPE-------------------------------EAYDFITNMK---IAPDHIMLG 289
S+ GR E EA + T MK + P++I
Sbjct: 348 SKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFI 407
Query: 290 SLLSACKIHGKLQLG 304
S+L+AC G L G
Sbjct: 408 SVLAACSHAGLLDEG 422
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/489 (41%), Positives = 300/489 (61%), Gaps = 2/489 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN-DVVASTVMINCY 60
G++IH ++ G + L+ +Y +CG + A +L ++ + + T +++ Y
Sbjct: 298 GKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGY 357
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++ G + A +F +K +D V WTAMI G ++G A++LFR M RPN T+
Sbjct: 358 IKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLA 417
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
+LS S L +L G+ IH K + V ALI MY++ G+I A + F+ ++ E
Sbjct: 418 AMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCE 477
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
RD ++ S+I LA HG + EA+E+F M+ +G+RP +T+VGV +AC+H GLV+ G +
Sbjct: 478 RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY 537
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F M I P + HY C+VDL R G +EA +FI M I PD + GSLLSAC++H
Sbjct: 538 FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHK 597
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+ LG+ A+RLL +SG Y L+N Y++ GKW+EA +IR MK+ V+KE G S I
Sbjct: 598 NIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
EV +++H F + D HP++ +IY M+++ +K GY P T VLHD+E+ KE L
Sbjct: 658 EVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRH 717
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GLIST TT+R++KNLRVCNDCH+ IK I+ + R+IIVRD RFHHF++
Sbjct: 718 HSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKD 777
Query: 480 GTCSCGDYW 488
G CSC DYW
Sbjct: 778 GFCSCRDYW 786
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 187/415 (45%), Gaps = 73/415 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H ++KLGLR N S L+ +Y KCG+ A +FD M D+ + MI ++
Sbjct: 165 GKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMV-VRDISSWNAMIALHM 223
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN-VRPNEVTIV 120
+ G ++ A F ++ +D V W +MI G + G RALD+F +M RD+ + P+ T+
Sbjct: 224 QVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLA 283
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC---------------- 164
VLSAC+ L L +G+ IHS++ D++ IV ALI+MYSRC
Sbjct: 284 SVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTK 343
Query: 165 -----------------GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
GD+++A +F +K+RDV + ++I G HG EA+ +FR
Sbjct: 344 DLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRS 403
Query: 208 MINQGIRPTKVTFVGVLNACS-----------HGGLVDLGFEIFQ--------------- 241
M+ G RP T +L+ S HG V G EI+
Sbjct: 404 MVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSG-EIYSVSVSNALITMYAKAG 462
Query: 242 ---SMTRDYGI---EPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLL 292
S +R + + E + ++ L++ G EEA + M + PDHI +
Sbjct: 463 NITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVF 522
Query: 293 SACKIHGKLQLGEQIAKRLLDCRS--ADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
SAC G + G Q + D Y + + + +G +EA + KM
Sbjct: 523 SACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKM 577
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 176/380 (46%), Gaps = 42/380 (11%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
+H +V+K GL + L+ +Y K G A +LFDEMP +TV+ + Y + G
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVL-SAYSKRG 94
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
+++ E F ++ +D+V WT MI G G+ +A+ + +M ++ + P + T+ VL+
Sbjct: 95 DMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLA 154
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD------------------ 166
+ + +E G+ +HS++ K + N V +L+NMY++CGD
Sbjct: 155 SVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISS 214
Query: 167 -------------IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG- 212
+D A+ FE+M ERD+ T+NS+I+G G + A+++F +M+
Sbjct: 215 WNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSL 274
Query: 213 IRPTKVTFVGVLNACSHGGLVDLGFEIFQSM-TRDYGIEPQIEHYGCIVDLLSRVGRPEE 271
+ P + T VL+AC++ + +G +I + T + I + ++ + SR G E
Sbjct: 275 LSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV--LNALISMYSRCGGVET 332
Query: 272 AYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGE--QIAKRLLDCRSADSGTYVLLSNAY 329
A I I + L + G ++LG+ Q + + D + + Y
Sbjct: 333 ARRLIEQRGTKDLKIEGFTAL----LDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGY 388
Query: 330 ASSGKWKEAVQIRAKMKEAG 349
G + EA+ + M G
Sbjct: 389 EQHGSYGEAINLFRSMVGGG 408
>gi|77548549|gb|ABA91346.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 624
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/465 (39%), Positives = 285/465 (61%), Gaps = 23/465 (4%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
L++++ +CG ++FD + D+ A +++ Y +R++ +D C
Sbjct: 183 LLDVFARCGRIASCRKVFDRIAN-PDLPAWNALLSAY-------------ARLRARDVAC 228
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
++ D + L++F M ++PNE+T+V V+ AC +LGA+ G W H+Y
Sbjct: 229 ASSAADAI---------LEMFVRMLSLAIKPNEITLVAVIGACGELGAVSHGVWAHTYAV 279
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
K R+ +N IV AL+ MY+ CG +D A QVF +RD YN+++ GLA+HG A+
Sbjct: 280 KRRLAVNCIVATALVEMYAGCGRLDLAEQVFAAASDRDTRCYNAMLHGLAVHGHGRAALS 339
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
+F M +G+ VT + V+ AC+H GLVD G + F M ++GIEP IEHYGC+VD+L
Sbjct: 340 LFDRMHGEGVPVDGVTVLSVMCACAHAGLVDEGLDYFDRMEIEFGIEPSIEHYGCMVDML 399
Query: 264 SRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV 323
SR GR +A I M I P+ + SL+ AC IHGKL+LG+++ L+ DSG +V
Sbjct: 400 SRAGRLNDAEKLIHGMPIVPNAAIYRSLIRACGIHGKLELGKKMIAELMRLEPDDSGNHV 459
Query: 324 LLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYK 383
L+SN YA++ +W +A + R +MK G+ K PG S +++N +HEF++GD HP ++IY
Sbjct: 460 LISNFYATTNRWDDAKKARKEMKSMGIDKSPGSSFVDINGVLHEFLVGDKTHPASKEIYA 519
Query: 384 KMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVK 443
+++++ + G+ ST L D+E+ +K AL+ HSERLAI + LI++ P IR++K
Sbjct: 520 MVEDIETRLSECGHRSSTSSALFDVEEEDKADALSYHSERLAIAFALIASNPGAPIRIIK 579
Query: 444 NLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
NLRVC DCH KL++ + R+I++RDR RFHHF +G CSCGD+W
Sbjct: 580 NLRVCADCHESAKLVSRVYGREIVMRDRTRFHHFRDGVCSCGDFW 624
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 57/105 (54%), Gaps = 9/105 (8%)
Query: 141 YMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLA-MHGRSI 199
++G H + ++G AL+++++RCG I +VF+ + D+ +N+L++ A + R +
Sbjct: 167 FLGAHAASCDRVLGAALLDVFARCGRIASCRKVFDRIANPDLPAWNALLSAYARLRARDV 226
Query: 200 EA--------VEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
+EMF M++ I+P ++T V V+ AC G V G
Sbjct: 227 ACASSAADAILEMFVRMLSLAIKPNEITLVAVIGACGELGAVSHG 271
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/492 (40%), Positives = 292/492 (59%), Gaps = 14/492 (2%)
Query: 5 IHGQVLKLGLRSNRST-----RLKLVELYGKCGEFKDAMQLFDEMPEC---NDVVASTVM 56
+ Q+L+ G N T + E G CG QL +C ++V + +
Sbjct: 139 LFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGH-----QLHGFCVKCGFDSNVHVGSAL 193
Query: 57 INCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
++ Y +GL+++A VF ++ ++ V W A+I G R +AL+LF+ M R+ RP+
Sbjct: 194 LDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSH 253
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
+ + ACS G LE G+W+H+YM K L G L++MY++ G I A ++F+
Sbjct: 254 FSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDR 313
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
+ +RDV ++NSL+ A HG EAV F EM GIRP +++F+ VL ACSH GL+D G
Sbjct: 314 LAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEG 373
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
+ ++ M +D GI + HY IVDLL R G A FI M I P + +LL+AC+
Sbjct: 374 WHYYELMKKD-GIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACR 432
Query: 297 IHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGC 356
+H +LG A+ + + D G +V+L N YAS G+W +A ++R KMKE+GV+KEP C
Sbjct: 433 MHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPAC 492
Query: 357 SSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWA 416
S +E+ N IH F+ D RHPQRE+I +K +E+ +K GY P T V+ ++ E+E
Sbjct: 493 SWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVN 552
Query: 417 LAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHH 476
L HSE++A+ + L++T P +TI + KN+RVC DCHS IKL + R+IIVRD NRFHH
Sbjct: 553 LQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHSAIKLASKAVGREIIVRDTNRFHH 612
Query: 477 FENGTCSCGDYW 488
F++G CSC DYW
Sbjct: 613 FKDGACSCKDYW 624
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 132/253 (52%), Gaps = 4/253 (1%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D+V + ++N Y + G +E A +VF ++ +D V WT +I G ++ AL LF +M
Sbjct: 84 HDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQM 143
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
R PNE T+ V+ A + G +H + K D N VG AL+++Y+R G +
Sbjct: 144 LRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLM 203
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
D A VF+ ++ R+ ++N+LIAG A + +A+E+F+ M+ +G RP+ ++ + AC
Sbjct: 204 DDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGAC 263
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYG-CIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
S G ++ G + M + E + G ++D+ ++ G +A + D +
Sbjct: 264 SSTGFLEQGKWVHAYMIKSG--EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVV 320
Query: 287 MLGSLLSACKIHG 299
SLL+A HG
Sbjct: 321 SWNSLLTAYAQHG 333
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 118/266 (44%), Gaps = 40/266 (15%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L C+ L GR +H ++ + + ++ L+NMY++CG +++A +VF++M ERD
Sbjct: 57 LLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERD 116
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HG 230
T+ +LI+G + H R +A+ +F +M+ G P + T V+ A + HG
Sbjct: 117 FVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHG 176
Query: 231 GLVDLGFE--------IFQSMTRDYGIEPQIE------------HYGCIVDLLSRVGRPE 270
V GF+ + TR YG+ + + ++ +R E
Sbjct: 177 FCVKCGFDSNVHVGSALLDLYTR-YGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTE 235
Query: 271 EAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRS---ADSGTYVL 324
+A + M P H SL AC G L+ G+ + ++ A +G +L
Sbjct: 236 KALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLL 295
Query: 325 LSNAYASSGKWKEAVQIRAKMKEAGV 350
+ YA SG +A +I ++ + V
Sbjct: 296 --DMYAKSGSIHDARKIFDRLAKRDV 319
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 33/196 (16%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ +H ++K G + L+++Y K G DA ++FD + + DVV+ ++ Y
Sbjct: 271 QGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAK-RDVVSWNSLLTAY 329
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+HG A VCW F EM+R +RPNE++ +
Sbjct: 330 AQHGFGNEA------------VCW-------------------FEEMRRGGIRPNEISFL 358
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VL+ACS G L+ G + M K I L ++++ R GD+++AL+ EEM E
Sbjct: 359 SVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIE 418
Query: 180 RDVTTYNSLIAGLAMH 195
+ +L+ MH
Sbjct: 419 PTAAIWKALLNACRMH 434
>gi|224080790|ref|XP_002306231.1| predicted protein [Populus trichocarpa]
gi|222849195|gb|EEE86742.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/436 (43%), Positives = 281/436 (64%), Gaps = 1/436 (0%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
T +++ YV+ G V+ A +VF R++ KD V W+AMI G + G+ A+ +F +M ++ ++
Sbjct: 45 TALLDAYVKRGNVDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIK 104
Query: 114 PNEVTIVCVLSACSQLGA-LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
PNE T +++AC+ A +E G+ +H++ K R + V AL+ MYS+ GDI+ A +
Sbjct: 105 PNEYTFSGIINACAAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFE 164
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
VF+ +ERD+ ++NS+I+G A HG +A+E+F EM Q + VTF+GV++AC+H GL
Sbjct: 165 VFKRQRERDLVSWNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGL 224
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
+ G F M +D+ IEP++EHY C+VDL R G +A + I M + +LL
Sbjct: 225 ANEGQRYFDIMVKDHHIEPRMEHYSCMVDLYGRAGMLVKAMEIINEMPFPASANVWRTLL 284
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
+A IH L++G+ A +L+ + + +YVLL+N YAS G WKE ++R M+E V+K
Sbjct: 285 AASCIHRNLEVGKLAADKLISLQPQNPASYVLLTNMYASVGNWKERAKVRKLMEEKKVKK 344
Query: 353 EPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE 412
G S IEV N+ + F+ GD+ HP QIY K++EL +K GY P T V D+++
Sbjct: 345 VAGYSWIEVKNKTYTFLAGDVSHPLSNQIYAKLEELSCQLKGAGYQPDTSYVFQDVDEEH 404
Query: 413 KEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRN 472
KE L+ HSERLAI +GLI T P T +++VKNLRVC DCHS+IKLI+ + R I+VRD N
Sbjct: 405 KEAILSQHSERLAIAFGLIGTPPGTPLQIVKNLRVCGDCHSVIKLISILEGRDIVVRDSN 464
Query: 473 RFHHFENGTCSCGDYW 488
RFHHF+ G CSCGDYW
Sbjct: 465 RFHHFKGGLCSCGDYW 480
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 87/155 (56%), Gaps = 3/155 (1%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
N + S+ ++ Y + G +E+AFEVF R + +D V W ++I G ++G +AL++F EM
Sbjct: 141 NALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISGYAQHGYGRKALEVFEEM 200
Query: 108 QRDNVRPNEVTIVCVLSACSQLG-ALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
QR N+ + VT + V+SAC+ G A E R+ + H I+ ++++Y R G
Sbjct: 201 QRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIMVKDHHIEPRMEHYSCMVDLYGRAGM 260
Query: 167 IDKALQVFEEMK-ERDVTTYNSLIAGLAMHGRSIE 200
+ KA+++ EM + +L+A +H R++E
Sbjct: 261 LVKAMEIINEMPFPASANVWRTLLAASCIH-RNLE 294
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 121/235 (51%), Gaps = 20/235 (8%)
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M R+ ++PN+ T +L+A + E+ H+ K + VG AL++ Y + G+
Sbjct: 1 MSREGIKPNDFTYSTILTAQPGVSPFEM----HAQAIKRNYVKSPSVGTALLDAYVKRGN 56
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+D+A +VF+ ++E+D+ ++++I G A G + AV +F +M + I+P + TF G++NA
Sbjct: 57 VDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINA 116
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI----VDLLSRVGRPEEAYDFITNMKIA 282
C+ G E + + + I+ + + C+ + + S+ G E A++ +
Sbjct: 117 CA---APTAGVEQGKQL-HAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQR-E 171
Query: 283 PDHIMLGSLLSACKIHG----KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSG 333
D + S++S HG L++ E++ ++ L+ D T++ + +A +G
Sbjct: 172 RDLVSWNSIISGYAQHGYGRKALEVFEEMQRQNLEM---DGVTFIGVISACTHTG 223
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/437 (43%), Positives = 280/437 (64%), Gaps = 1/437 (0%)
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
+T +++ YV+ G V + VF + KD V W+AM+ GL + + +A+++F ++ ++ V
Sbjct: 442 ATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGV 501
Query: 113 RPNEVTIVCVLSACSQLGA-LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
+PNE T V++ACS A +E G+ IH+ K V AL+ MYS+ G+I+ A
Sbjct: 502 KPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAE 561
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
+VF +ERD+ ++NS+I G HG + +A+E+F+ M NQG+ VTF+GVL AC+H G
Sbjct: 562 KVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAG 621
Query: 232 LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSL 291
LV+ G + F M +DY I+ +IEHY C+VDL SR G ++A D I M + +L
Sbjct: 622 LVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTL 681
Query: 292 LSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
L+AC++H L+LG+ A++L+ + D+ YVLLSN +A +G W+E +R M E V+
Sbjct: 682 LAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVK 741
Query: 352 KEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDW 411
KE GCS IE+ N I F+ GD+ HP + +Y K++EL +K GY P T V HD+E+
Sbjct: 742 KEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEE 801
Query: 412 EKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDR 471
KE L+ HSERLAI YGLI+ P I++ KNLR+C DCH++I+LI+ I +R +IVRD
Sbjct: 802 HKEAILSQHSERLAIAYGLIALPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDS 861
Query: 472 NRFHHFENGTCSCGDYW 488
NRFHHF+ G CSCG YW
Sbjct: 862 NRFHHFKGGVCSCGGYW 878
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 110/253 (43%), Gaps = 43/253 (16%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H Q LK G + S LV++Y K +F+D +FDEM
Sbjct: 123 GRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEM----------------- 165
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+K+ V WT+++ G RNG + L +MQ + V PN T
Sbjct: 166 ---------------GIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFAT 210
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL A + +E G +H+ + K+ + V ALI MY + + A VF+ M RD
Sbjct: 211 VLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRD 270
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HG 230
T+N +I G A G +E +MF M G++ ++ F L CS H
Sbjct: 271 SVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHC 330
Query: 231 GLVDLGFEIFQSM 243
G+V G+E Q +
Sbjct: 331 GVVKNGYEFAQDI 343
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 1/170 (0%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+I Y++ +V +A VF + V+D+V W MI G G +F M+ V+ +
Sbjct: 246 LICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLS 305
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
L CSQ L + +H + K+ + + AL+ YS+C +D+A ++F
Sbjct: 306 RTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFS 365
Query: 176 EM-KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL 224
+V T+ ++I G + + +AV++F +M +G+RP T+ VL
Sbjct: 366 MADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVL 415
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 89/178 (50%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A ++F +KD + ++ RN AL LF+++ + + +T+ C L C
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
L +GR +H K + VG +L++MY + D + +F+EM ++V ++ SL
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176
Query: 189 IAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRD 246
++G A +G + E + + +M +G+ P TF VL A + +++ G ++ + ++
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN 234
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 90/157 (57%), Gaps = 3/157 (1%)
Query: 46 ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
+ N + S+ ++ Y + G +E+A +VF+R + +D V W +MI G ++G+ +AL++F+
Sbjct: 537 KSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQ 596
Query: 106 EMQRDNVRPNEVTIVCVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRC 164
MQ + ++VT + VL+AC+ G +E G ++ + + + ID ++++YSR
Sbjct: 597 IMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRA 656
Query: 165 GDIDKALQVFEEMK-ERDVTTYNSLIAGLAMHGRSIE 200
G DKA+ + M T + +L+A +H R++E
Sbjct: 657 GMFDKAMDIINGMPFPASPTIWRTLLAACRVH-RNLE 692
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/441 (41%), Positives = 279/441 (63%), Gaps = 1/441 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D++ +++ Y + G++ A F+ + ++D V +TA+I G V+NG L +F EMQ
Sbjct: 359 DLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQ 418
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ P + T+ VL AC+ L L G H Y + ++ ALI+MY++CG ID
Sbjct: 419 LSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKID 478
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +VF+ M +R + ++N++I +HG +EA+ +F M ++G++P VTF+ +++ACS
Sbjct: 479 TARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACS 538
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLV G F +MT+D+GI P++EHY C+VDLLSR G +E + FI M + PD +
Sbjct: 539 HSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVW 598
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
G+LLSAC+++ ++LGE ++K++ +G +VLLSN Y++ G+W +A Q+R KE
Sbjct: 599 GALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQ 658
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIR-HPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
G +K PGCS IE++ +H F+ G R HPQ QI K+ EL +K GY + V D
Sbjct: 659 GFEKSPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQAESSYVFQD 718
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
+E+ EKE L HSE+LAI +G++S P I V KNLRVC DCH+ IK I+ +TKR I
Sbjct: 719 VEEEEKERVLLYHSEKLAIAFGILSLSPDKHIIVTKNLRVCGDCHTAIKFISLVTKRDIT 778
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
VRD +RFHHF++G C+CGD+W
Sbjct: 779 VRDASRFHHFKDGICNCGDFW 799
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 113/245 (46%), Gaps = 37/245 (15%)
Query: 2 GREIHGQVLKLGLRSNRSTRL-------KLVELYGKCGEFKDAMQLFDEMPECNDVVAST 54
G+ IH +LK R++ + KLV+LY C E K A +FD+MP
Sbjct: 28 GKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARHVFDKMPH-------- 79
Query: 55 VMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP 114
+ K+ V W +I NG A+DL+ +M + P
Sbjct: 80 ----------------------RPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITP 117
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
N T VL ACS L GR IH + + R++ N V AL++ Y++CG +D A +VF
Sbjct: 118 NRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVF 177
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
++M +RDV +NS+I+G ++H S + V + + P T VGVL A + +
Sbjct: 178 DKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLR 237
Query: 235 LGFEI 239
G EI
Sbjct: 238 HGKEI 242
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 113/231 (48%), Gaps = 34/231 (14%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIHG ++ G + ++++YGKC A ++FD M
Sbjct: 239 GKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMM----------------- 281
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM---QRDNVRPNEVT 118
G+V+N V W+AM+ V M AL+LF ++ + D + + VT
Sbjct: 282 --GIVKN------------EVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVT 327
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
+ V+ C+ L L G +H Y K L+ +VG L++MY++CG I+ A++ F EM
Sbjct: 328 LATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMD 387
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH 229
RD ++ ++I+G +G S E + MF EM GI P K T VL AC+H
Sbjct: 388 LRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAH 438
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 173/392 (44%), Gaps = 43/392 (10%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPEC---NDVVASTVMI 57
E +++ ++L G+ NR T +++ E + ++ ++ ++V ST ++
Sbjct: 102 EAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALV 161
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGL-VRNGEMARALDLFREMQRDNVRPNE 116
+ Y + G +++A EVF ++ +D V W +MI G + G L +MQ D V PN
Sbjct: 162 DFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQND-VSPNS 220
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
TIV VL A +Q+ +L G+ IH + + + +VG ++++Y +C ID A ++F+
Sbjct: 221 STIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDM 280
Query: 177 MK-ERDVTTYNSLIAGLAMHGRSIEAVEMFREMI---NQGIRPTKVTFVGVLNACS---- 228
M ++ T+++++ + EA+E+F +++ + I + VT V+ C+
Sbjct: 281 MGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTD 340
Query: 229 -------HGGLVDLGFEI-------FQSMTRDYGIEPQIEHYGCIVDLLSRV-------- 266
H + GF + SM GI + +DL V
Sbjct: 341 LSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISG 400
Query: 267 ----GRPEEAYDFITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC-RSAD 318
G EE M+++ P+ L S+L AC L G + C +AD
Sbjct: 401 YVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTAD 460
Query: 319 SGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
+ L + YA GK A ++ +M + G+
Sbjct: 461 TMICNALIDMYAKCGKIDTARKVFDRMHKRGI 492
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 34/170 (20%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
L+++Y KCG+ A ++FD M + + V
Sbjct: 467 LIDMYAKCGKIDTARKVFDRMHK--------------------------------RGIVS 494
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGR-WIHSYM 142
W MI +G AL LF MQ + ++P++VT +C++SACS G + G+ W ++
Sbjct: 495 WNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMT 554
Query: 143 GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-ERDVTTYNSLIAG 191
I ++++ SR G + E+M E DV + +L++
Sbjct: 555 QDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSA 604
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/487 (40%), Positives = 293/487 (60%), Gaps = 35/487 (7%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
R++HG +LK+GL S DV + +I+ Y +
Sbjct: 134 RQLHGSILKVGLES--------------------------------DVFVRSALIDTYSK 161
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
G +A VF+ + D V W ++I G +N + L L++ M+R + ++ T+ V
Sbjct: 162 LGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSV 221
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM-KERD 181
L AC+ L LELGR +H ++ K+ DL I+ AL++MY +CG ++ A +F M E+D
Sbjct: 222 LRACTGLALLELGRQVHVHVLKYDQDL--ILNNALLDMYCKCGSLEDANLLFTRMMTEKD 279
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +++++IAGLA +G S +A+++F M ++G +P +T +GVL ACSH GLV+ G+ FQ
Sbjct: 280 VISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQ 339
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM +GI+P EHYGCI+DLL R G+ +EA I M PD + LL AC++H +
Sbjct: 340 SMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNV 399
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
L AK +L AD+GTY+LLSN YA+S KW++ ++R KM+ GV+K+PGCS IEV
Sbjct: 400 DLAIYAAKEILKLDPADAGTYILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEV 459
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ ++H FILGD HP+ E+I +++ +L Q + GY P T VL D+E + E +L HS
Sbjct: 460 SKQVHAFILGDNSHPRIEEIKRELSQLIQRLMRLGYVPDTNFVLQDLEGEQMEDSLQYHS 519
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GL+S TI + KNLR+C DCH KL++ + R I++RD R+HHF G
Sbjct: 520 EKLAIVFGLMSLPNQKTIHIRKNLRICGDCHIFAKLVSQLENRVIVIRDPIRYHHFRGGV 579
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 580 CSCGDYW 586
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 118/246 (47%), Gaps = 6/246 (2%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
+IN YV+ GL++ A +F + ++ V WT MI + +ALD M R+ VR
Sbjct: 55 NTLINMYVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVR 114
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
PN T VL AC G L L R +H + K ++ + V ALI+ YS+ G+ AL V
Sbjct: 115 PNMYTYSSVLRACD--GLLNL-RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNV 171
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV 233
F EM D+ +NS+I G A + E + +++ M + T VL AC+ L+
Sbjct: 172 FNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALL 231
Query: 234 DLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLS 293
+LG ++ + + + + ++D+ + G E+A T M D I ++++
Sbjct: 232 ELGRQVHVHVLK---YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIA 288
Query: 294 ACKIHG 299
+G
Sbjct: 289 GLAQNG 294
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 99/186 (53%), Gaps = 5/186 (2%)
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M R+ + + +T ++ C GA++ R +H ++ + + + LINMY + G
Sbjct: 7 MHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGL 66
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+D+A +F+EM +R+V ++ ++I+ + + +A++ M+ +G+RP T+ VL A
Sbjct: 67 LDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRA 126
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
C GL++L ++ S+ + G+E + ++D S++G +A + M I D +
Sbjct: 127 CD--GLLNLR-QLHGSILK-VGLESDVFVRSALIDTYSKLGEQHDALNVFNEM-ITGDLV 181
Query: 287 MLGSLL 292
+ S++
Sbjct: 182 VWNSII 187
>gi|296086445|emb|CBI32034.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/492 (41%), Positives = 292/492 (59%), Gaps = 48/492 (9%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG +IH Q+LKLG S+ LV Y C A +FD M E
Sbjct: 146 EGEQIHAQILKLGFDSDVYINNSLVHFYATCDRLDFAKGVFDRMSE-------------- 191
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ V W +ID VR GE AL+LF EMQ+ P+ TI
Sbjct: 192 ------------------RSLVSWNVVIDAFVRFGEFDAALNLFGEMQK-FFEPDGYTIQ 232
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+ +AC+ +G+L LG I + ++ +L++MY +CG ++ ALQ+F M +R
Sbjct: 233 SIANACAGMGSLSLG-----------IVNDVLLNTSLVDMYCKCGSLELALQLFHRMPKR 281
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMI-NQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
DVT++NS+I G + HG A+E F M+ + + P +TFVGVL+AC+HGGLV G
Sbjct: 282 DVTSWNSMILGFSTHGEVAAALEYFGCMVRTEKLMPNAITFVGVLSACNHGGLVSEGRRY 341
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC-KIH 298
F M +Y I+P++EHYGC+VDLL+R G +EA D ++NM + PD ++ SLL AC K +
Sbjct: 342 FDVMVTEYKIKPELEHYGCLVDLLARAGLIDEALDVVSNMPMRPDLVIWRSLLDACCKQN 401
Query: 299 GKLQLGEQIAKRLLDCRSAD-SGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
++L E++A+R+L+ SG YVLLS YAS+ +W + +R M + GV KEPGCS
Sbjct: 402 AGVELSEEMARRVLEAEGGVCSGVYVLLSRVYASASRWNDVGMVRKLMTDKGVVKEPGCS 461
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSP-STEVVLHDIEDWEKEWA 416
SIE++ HEF GD HPQ E+IY + +++ V+ GYSP S++ + D K+++
Sbjct: 462 SIEIDGVAHEFFAGDTSHPQTEEIYSALDVIEERVERVGYSPDSSQAPMVDETIDGKQYS 521
Query: 417 LAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHH 476
L +HSERLAI +GL+ TKP IR+ KNLRVCN+CH + KLI+ + R+IIVRDR RFHH
Sbjct: 522 LRLHSERLAIAFGLLKTKPGMPIRIFKNLRVCNNCHQVTKLISRVFNREIIVRDRIRFHH 581
Query: 477 FENGTCSCGDYW 488
F++G CSC DYW
Sbjct: 582 FKDGACSCMDYW 593
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 88/170 (51%), Gaps = 3/170 (1%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMAR-ALDLF-REMQRDNVRPNEVTIVCVLSAC 126
AF VF +++ ++ W A+I R+ + + A+ L+ R +++ +V ++ T VL AC
Sbjct: 79 AFRVFHQIENPNSFMWNALIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPFVLKAC 138
Query: 127 SQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYN 186
+ L AL G IH+ + K D + + +L++ Y+ C +D A VF+ M ER + ++N
Sbjct: 139 AYLFALSEGEQIHAQILKLGFDSDVYINNSLVHFYATCDRLDFAKGVFDRMSERSLVSWN 198
Query: 187 SLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
+I G A+ +F EM + P T + NAC+ G + LG
Sbjct: 199 VVIDAFVRFGEFDAALNLFGEM-QKFFEPDGYTIQSIANACAGMGSLSLG 247
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/486 (39%), Positives = 306/486 (62%), Gaps = 5/486 (1%)
Query: 8 QVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN----DVVASTVMINCYVEH 63
++L +G+R + T + L ++G+ + + + + C D+V ++N Y +
Sbjct: 339 EMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKL 398
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTIVCV 122
G ++ A VF ++ +D + W +I G +NG + A+D + M+ + PN+ T V +
Sbjct: 399 GSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSI 458
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L A S +GAL+ G IH + K+ + L+ V LI+MY +CG ++ A+ +F E+ +
Sbjct: 459 LPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETS 518
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
+N++I+ L +HG +A+++F++M G++ +TFV +L+ACSH GLVD F +
Sbjct: 519 VPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDT 578
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
M ++Y I+P ++HYGC+VDL R G E+AY+ ++NM I D + G+LL+AC+IHG +
Sbjct: 579 MQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAE 638
Query: 303 LGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVN 362
LG + RLL+ S + G YVLLSN YA+ GKW+ AV++R+ ++ G++K PG SS+ V
Sbjct: 639 LGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPGWSSVVVG 698
Query: 363 NEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSE 422
+ + F G+ HPQ +IY++++ L +K GY P VL D+E+ EKE L HSE
Sbjct: 699 SVVEVFYAGNQSHPQCAEIYEELRVLNAKMKSLGYVPDYSFVLQDVEEDEKEEILTSHSE 758
Query: 423 RLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTC 482
RLAI +G+IST P + IR+ KNLRVC DCH+ K I+ IT+R+IIVRD NRFHHF++G C
Sbjct: 759 RLAIVFGIISTPPKSPIRIFKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGIC 818
Query: 483 SCGDYW 488
SCGDYW
Sbjct: 819 SCGDYW 824
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 171/341 (50%), Gaps = 39/341 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H V+K GL S+ L+ +Y K G +DA ++FD M
Sbjct: 267 GVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGM----------------- 309
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+V+D V W ++I +N + AL F+EM +RP+ +T+V
Sbjct: 310 ---------------EVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVS 354
Query: 122 VLSACSQLGALELGRWIHSYMGKHR-IDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+ S QL +GR +H ++ + R ++++ ++G AL+NMY++ G ID A VFE++ R
Sbjct: 355 LASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSR 414
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQG--IRPTKVTFVGVLNACSHGGLVDLGFE 238
DV ++N+LI G A +G + EA++ + M+ +G I P + T+V +L A SH G + G +
Sbjct: 415 DVISWNTLITGYAQNGLASEAIDAY-NMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMK 473
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
I + ++ + + C++D+ + GR E+A + + +++S+ IH
Sbjct: 474 IHGRLIKN-CLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIP-QETSVPWNAIISSLGIH 531
Query: 299 GKLQLGEQIAKRL-LDCRSADSGTYVLLSNAYASSGKWKEA 338
G + Q+ K + D AD T+V L +A + SG EA
Sbjct: 532 GHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEA 572
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 155/302 (51%), Gaps = 7/302 (2%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+DV + +I+ Y G VE A +VF + V+D W AMI G +NG +A AL + M
Sbjct: 180 HDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRM 239
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ + V+ + VT+ +L C+Q + G +H Y+ KH ++ + V ALINMYS+ G +
Sbjct: 240 KTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRL 299
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A +VF+ M+ RD+ ++NS+IA + + A+ F+EM+ G+RP +T V + A
Sbjct: 300 QDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSL--AS 357
Query: 228 SHGGLVD--LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDH 285
G L D +G + + R +E I +V++ +++G + A + + D
Sbjct: 358 IFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLP-SRDV 416
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRLLDCRS--ADSGTYVLLSNAYASSGKWKEAVQIRA 343
I +L++ +G + + R+ + GT+V + AY+ G ++ ++I
Sbjct: 417 ISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHG 476
Query: 344 KM 345
++
Sbjct: 477 RL 478
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 121/250 (48%), Gaps = 6/250 (2%)
Query: 46 ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
+ DVV T ++ Y G + + F ++ K+ W +M+ VR G ++D
Sbjct: 79 KAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVRRGRYRDSMDCVT 138
Query: 106 EM-QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC 164
E+ VRP+ T VL AC L G +H ++ K + + V +LI++YSR
Sbjct: 139 ELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMHCWVLKMGFEHDVYVAASLIHLYSRF 195
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL 224
G ++ A +VF +M RDV ++N++I+G +G EA+ + M + ++ VT +L
Sbjct: 196 GAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSML 255
Query: 225 NACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPD 284
C+ V +G + +G+E + ++++ S+ GR ++A M++ D
Sbjct: 256 PICAQSNDV-VGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVR-D 313
Query: 285 HIMLGSLLSA 294
+ S+++A
Sbjct: 314 LVSWNSIIAA 323
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/487 (41%), Positives = 286/487 (58%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +IH V+K+GL S+ L+++Y KCG +++M+LF E P NDV
Sbjct: 157 GNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVT---------- 206
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
W +I G V+ G+ +AL LF M V+ EVT
Sbjct: 207 ----------------------WNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSS 244
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
L AC+ L ALE G IHS K D + +V ALI+MY++CG I A VF+ M ++D
Sbjct: 245 ALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQD 304
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
++N++I+G +MHG EA+ +F +M ++P K+TFVGVL+AC++ GL+D G F
Sbjct: 305 EVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFT 364
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM +D+GIEP IEHY C+V LL R G ++A I + P ++ +LL AC IH +
Sbjct: 365 SMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDI 424
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LG A+R+L+ D T+VLLSN YA++ +W +R MK GV+KEPG S IE
Sbjct: 425 ELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIES 484
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+H F +GD HP+ I ++ L K GY P+ VVL D+ED EKE L +HS
Sbjct: 485 QGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHS 544
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ERLA+ +G+I T + IR++KNLR+C DCH+ IK I+ + +R+I+VRD NRFHHF+ G
Sbjct: 545 ERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGL 604
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 605 CSCGDYW 611
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 152/288 (52%), Gaps = 4/288 (1%)
Query: 47 CNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
C D+ A +++N YV+ + +A ++F + ++T+ + +I G + A++LF
Sbjct: 70 CLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVR 129
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
+ R+ V PN+ T VL AC+ + L LG IH ++ K + + V AL+++Y++CG
Sbjct: 130 LHRE-VLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGR 188
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
++ ++++F E R+ T+N++I G G +A+ +F M+ ++ T+VT+ L A
Sbjct: 189 MENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRA 248
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
C+ ++ G +I S+T + I ++D+ ++ G ++A + ++ D +
Sbjct: 249 CASLAALEPGLQI-HSLTVKTTFDKDIVVTNALIDMYAKCGSIKDA-RLVFDLMNKQDEV 306
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNAYASSG 333
+++S +HG + +I ++ + D T+V + +A A++G
Sbjct: 307 SWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAG 354
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 6/199 (3%)
Query: 82 VCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV---TIVCVLSACSQLGALELGRWI 138
VC + R G ++ L +E +V P+E L C Q G+ +
Sbjct: 2 VCRNNFLIQFSRRGFSVQSAKLTQEFV-GHVSPSEFNSHAYANALQDCIQKDEPSRGKGL 60
Query: 139 HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRS 198
H + K L+ L+NMY + + A ++F+EM ER+ ++ +LI G A R
Sbjct: 61 HCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRF 120
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGC 258
+EA+E+F + ++ + P + TF VL AC+ ++LG +I + + G+ +
Sbjct: 121 LEAIELFVRL-HREVLPNQFTFASVLQACATMEGLNLGNQIHCHVIK-IGLHSDVFVSNA 178
Query: 259 IVDLLSRVGRPEEAYDFIT 277
++D+ ++ GR E + +
Sbjct: 179 LMDVYAKCGRMENSMELFA 197
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/523 (38%), Positives = 298/523 (56%), Gaps = 37/523 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN------------- 48
G++IHG ++ N L ++Y KCGE + A LFD + + N
Sbjct: 174 GKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAK 233
Query: 49 ---------------------DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAM 87
D V + +I Y + G V+ A VFS K KD VCWTAM
Sbjct: 234 NGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAM 293
Query: 88 IDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRI 147
+ G +NG AL LF EM +++ P+ T+ V+S+C++L +L G+ +H +
Sbjct: 294 MVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGL 353
Query: 148 DLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
+ N +V ALI+MYS+CG ID A VF M R+V ++N++I G A +G +A+E+F
Sbjct: 354 NNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFEN 413
Query: 208 MINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
M+ Q +P VTF+G+L+AC H ++ G E F S++ +G+ P ++HY C+V+LL R G
Sbjct: 414 MLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTG 473
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSN 327
R E+A I NM PD ++ +LLS C G + E A+ L + + Y++LSN
Sbjct: 474 RIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSN 533
Query: 328 AYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQE 387
YAS G+WK+ +R MK V+K G S IE++NE+H F D HP+ E IY+K+
Sbjct: 534 MYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNM 593
Query: 388 LKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKP--YTTIRVVKNL 445
L ++ EG++P+T +VLHD+ + EK ++ HSE+LA+ +GLI KP + IR++KN+
Sbjct: 594 LIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIK-KPNGISPIRIIKNI 652
Query: 446 RVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
R+CNDCH +K + I R+II+RD NRFHHF G CSC D W
Sbjct: 653 RICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 147/288 (51%), Gaps = 9/288 (3%)
Query: 23 KLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTV 82
+L+ LY K G+ +DA LFD+M + D + +++ Y + G ++N F R+ +D+V
Sbjct: 63 QLLHLYAKFGKLRDAQNLFDKMLK-RDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSV 121
Query: 83 CWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM 142
+ I G N +L+LF+ MQR+ P E TIV +L+A +QL L G+ IH +
Sbjct: 122 SYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSI 181
Query: 143 GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAV 202
N + AL +MY++CG+I++A +F+ + ++++ ++N +I+G A +G+ + +
Sbjct: 182 IVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCI 241
Query: 203 EMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDL 262
+ +M G P +VT ++ A G VD +F E I + ++
Sbjct: 242 GLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFK-----EKDIVCWTAMMVG 296
Query: 263 LSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQI 307
++ GR E+A M I PD L S++S+C L G+ +
Sbjct: 297 YAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAV 344
>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/490 (40%), Positives = 297/490 (60%), Gaps = 5/490 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR IHG V+KLGL SN L+ LY + G +DA +F M E D+++ M+ CYV
Sbjct: 596 GRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTE-RDLISWNSMMACYV 654
Query: 62 EHGLVENAFEVFS---RVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVT 118
+ G + ++ + ++ D V W A+I G N E A+ ++ ++ + N +T
Sbjct: 655 QDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYIT 714
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
+V L+A + L LE G+ +H + K + + V A ++MY +CG++ L++ +
Sbjct: 715 MVS-LAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPI 773
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
R ++N LI+ A HG +A E F EM+ G +P VTFV +L+AC+HGGLVD G
Sbjct: 774 NRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLA 833
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
+ SMTR++G+ P IEH CI+DLL R GR A FI M + P+ + SLL+AC+IH
Sbjct: 834 YYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIH 893
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
G L+L + A+ LL+ +D YVL SN A+SGKW++ +R +M ++K+P CS
Sbjct: 894 GNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSW 953
Query: 359 IEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALA 418
+++ +++H F +G+ HPQ +I K+ EL ++ K GY P T LHD+++ +KE+ L
Sbjct: 954 VKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLW 1013
Query: 419 IHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFE 478
HSERLA+ +GLI+T +T+R+ KNLRVC DCHS+ K ++ I RKI++RD RFHHF
Sbjct: 1014 NHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFS 1073
Query: 479 NGTCSCGDYW 488
G CSCGDYW
Sbjct: 1074 GGKCSCGDYW 1083
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 150/282 (53%), Gaps = 12/282 (4%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGL--VENAFEVFSRVKVKDT 81
L+++Y K GE +DA + FDEM E N V++ T +I+ Y +HG + +A VF ++ ++
Sbjct: 281 LIDMYAKSGEIEDAKRAFDEMEEKN-VISWTSLISGYAKHGYGHMAHARYVFDEMRHRNE 339
Query: 82 VCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGAL-ELGRWIHS 140
W+ M+ G VR G A+ LF +M V PN + +++ACS+ G + + G +H
Sbjct: 340 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 399
Query: 141 YMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIE 200
++ K I + VG AL++ Y G + A ++FEEM + +V ++ SL+ G + G E
Sbjct: 400 FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGE 459
Query: 201 AVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD---LGFEIFQSMTRDYGIEPQIEHYG 257
+ +++ M +G+ + TF V ++C GL++ LG+++ + + YG E +
Sbjct: 460 VLNVYQRMRQEGVSGNQNTFATVTSSC---GLLEDQVLGYQVLGHIIQ-YGFEDSVSVAN 515
Query: 258 CIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
++ + S EEA +M D I +++SA HG
Sbjct: 516 SLISMFSSFSSVEEACYVFDHMN-ECDIISWNAMISAYAHHG 556
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 176/435 (40%), Gaps = 93/435 (21%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G IH ++ G S+ KL+ Y K G+ A +FD MPE VV+ T M++ Y
Sbjct: 48 QGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPE-RSVVSWTAMVSGY 106
Query: 61 VEHGLVENAFEVFSRVK-------------------------------VKDTVCWTAMID 89
++G E AF +FS ++ +D V W AMI
Sbjct: 107 SQNGRFEKAFVLFSDMRHCGVKANHALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIG 166
Query: 90 GLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM-----GK 144
G G + +FR M R + P+ T+ VL A ++ G L + IH + G
Sbjct: 167 GYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGS 226
Query: 145 HRI-------------------DLN-----------------------HIVGGALINMYS 162
+ I DL + +G ALI+MY+
Sbjct: 227 YDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYA 286
Query: 163 RCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRS--IEAVEMFREMINQGIRPTKVTF 220
+ G+I+ A + F+EM+E++V ++ SLI+G A HG A +F EM ++ + ++
Sbjct: 287 KSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRHR----NEASW 342
Query: 221 VGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE----EAYDFI 276
+L+ GL + +F M G+EP ++ SR G + + F+
Sbjct: 343 STMLSGYVRVGLYEEAVGLFCQMW-GLGVEPNGFMVASLITACSRSGYMADEGFQVHGFV 401
Query: 277 TNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWK 336
I D + +G+ L +G + L K + + ++ L Y+ SG
Sbjct: 402 VKTGILGD-VYVGTAL--VHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPG 458
Query: 337 EAVQIRAKMKEAGVQ 351
E + + +M++ GV
Sbjct: 459 EVLNVYQRMRQEGVS 473
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 143/302 (47%), Gaps = 2/302 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV T +++ Y GLV NA ++F + + V WT+++ G +G L++++ M+
Sbjct: 409 DVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMR 468
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
++ V N+ T V S+C L LG + ++ ++ + + V +LI+M+S ++
Sbjct: 469 QEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVE 528
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+A VF+ M E D+ ++N++I+ A HG E++ F M + T +L+ CS
Sbjct: 529 EACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCS 588
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
+ G I + G++ + ++ L S GR E+A + + D I
Sbjct: 589 SVDNLKWGRGI-HGLVVKLGLDSNVCICNTLLTLYSEAGRSEDA-ELVFQAMTERDLISW 646
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
S+++ GK G +I LL D T+ L +A + + EAV+ ++E
Sbjct: 647 NSMMACYVQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREK 706
Query: 349 GV 350
G+
Sbjct: 707 GI 708
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 33/219 (15%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++ G +++ G + S L+ ++ ++A +FD M EC D+++ MI+ Y
Sbjct: 495 GYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNEC-DIISWNAMISAYA 553
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HGL +L F M+ + N T+
Sbjct: 554 HHGLCR-------------------------------ESLRCFHWMRHLHNETNSTTLSS 582
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+LS CS + L+ GR IH + K +D N + L+ +YS G + A VF+ M ERD
Sbjct: 583 LLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERD 642
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTF 220
+ ++NS++A G+ ++ +++ E++ G +P +VT+
Sbjct: 643 LISWNSMMACYVQDGKCLDGLKILAELLQMG-KPDRVTW 680
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 38/200 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+++HG V+KLG S+ +++YGKCGE D +++ + P ++ ++I+ +
Sbjct: 729 EGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ-PINRSRLSWNILISAF 787
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG + A E F EM + +P+ VT V
Sbjct: 788 ARHGCFQKARET-------------------------------FHEMLKLGPKPDHVTFV 816
Query: 121 CVLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+LSAC+ G ++ G + M + + H V +I++ R G + A +EM
Sbjct: 817 SLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCV--CIIDLLGRSGRLSHAEGFIKEM 874
Query: 178 K-ERDVTTYNSLIAGLAMHG 196
+ + SL+A +HG
Sbjct: 875 PVPPNDLAWRSLLAACRIHG 894
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/437 (43%), Positives = 281/437 (64%), Gaps = 2/437 (0%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM--QRDN 111
T +++ Y G V+ A VF+ + V++ V W+AMI +NG+ AL FREM + +
Sbjct: 221 TTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKD 280
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
PN VT+V VL AC+ L ALE GR IH Y+ + +D V AL+ MY RCG +D
Sbjct: 281 SSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQ 340
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
+VF+ M +RDV ++NSLI+ +HG +A+++F EM+ G PT VTFV VL ACSH G
Sbjct: 341 RVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEG 400
Query: 232 LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSL 291
LV+ G +F+SM RD+GI+PQ+EHY C+VDLL R R +EA + +M+ P + GSL
Sbjct: 401 LVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSL 460
Query: 292 LSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
L +C+IHG ++L E+ ++RL ++G YVLL++ YA + W E +++ ++ G+Q
Sbjct: 461 LGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQ 520
Query: 352 KEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDW 411
K PG +EV +++ F+ D +P EQI+ + +L + +K +GY P T+ VL+++E
Sbjct: 521 KLPGRCWMEVRRKMYSFVSMDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETE 580
Query: 412 EKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDR 471
EKE + HSE+LA+ +GLI+T IR+ KNLR+C DCH K I+ +++I+VRD
Sbjct: 581 EKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDV 640
Query: 472 NRFHHFENGTCSCGDYW 488
NRFH F+NG CSCGDYW
Sbjct: 641 NRFHRFKNGVCSCGDYW 657
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 151/314 (48%), Gaps = 10/314 (3%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
D +T +I Y + G V+ A +VF + + + W A+ L G L L+ +M
Sbjct: 110 QDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKM 169
Query: 108 QRDNVRPNEVTIVCVLSAC--SQLGA--LELGRWIHSYMGKHRIDLNHIVGGALINMYSR 163
R V + T VL AC S+ A L G+ IH+++ + + + + L++MY+R
Sbjct: 170 NRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYAR 229
Query: 164 CGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ--GIRPTKVTFV 221
G +D A VF M R+V +++++IA A +G++ EA+ FREM+ + P VT V
Sbjct: 230 FGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMV 289
Query: 222 GVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKI 281
VL AC+ ++ G I + R G++ + +V + R G+ + M
Sbjct: 290 SVLQACASLAALEQGRLIHGYILRR-GLDSILPVISALVTMYGRCGKLDVGQRVFDRMH- 347
Query: 282 APDHIMLGSLLSACKIHGKLQLGEQIAKRLL-DCRSADSGTYVLLSNAYASSGKWKEAVQ 340
D + SL+S+ +HG + QI + +L + S T+V + A + G +E +
Sbjct: 348 DRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKR 407
Query: 341 IRAKM-KEAGVQKE 353
+ M ++ G++ +
Sbjct: 408 LFESMWRDHGIKPQ 421
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 34/198 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR IHG +L+ GL S LV +YG+CG+ ++FD M + DVV+ +I+ Y
Sbjct: 303 QGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHD-RDVVSWNSLISSY 361
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG + R +A+ +F EM + P VT V
Sbjct: 362 GVHG--------YGR-----------------------KAIQIFEEMLANGASPTPVTFV 390
Query: 121 CVLSACSQLGALELGRWIHSYMGK-HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
VL ACS G +E G+ + M + H I ++++ R +D+A ++ ++M+
Sbjct: 391 SVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRT 450
Query: 179 ERDVTTYNSLIAGLAMHG 196
E + SL+ +HG
Sbjct: 451 EPGPKVWGSLLGSCRIHG 468
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 9/185 (4%)
Query: 87 MIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHR 146
+I L + G++ +AL + + + + E+ I+C C +L G +H ++ +
Sbjct: 52 LIQSLCKEGKLKQALRVLSQESSPSQQTYELLILC----CGHRSSLSDGLRVHRHILDNG 107
Query: 147 IDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
D + + LI MYS G +D A +VF++ ++R + +N+L L + G E + ++
Sbjct: 108 SDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYW 167
Query: 207 EMINQGIRPTKVTFVGVLNAC----SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDL 262
+M G+ + T+ VL AC + G EI +TR G + +VD+
Sbjct: 168 KMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRR-GYNSHVYIMTTLVDM 226
Query: 263 LSRVG 267
+R G
Sbjct: 227 YARFG 231
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/487 (39%), Positives = 290/487 (59%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIHG +L+ GL + + L+ LY +C +FD+M
Sbjct: 521 GKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKM----------------- 563
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
EN K VCW MI G +N ALD FR+M ++P E+ +
Sbjct: 564 -----EN----------KSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTG 608
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL ACSQ+ AL LG+ +HS+ K + + V ALI+MY++CG ++++ +F+ + E+D
Sbjct: 609 VLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKD 668
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+N +IAG +HG ++A+E+F M N+G RP TF+GVL AC+H GLV G +
Sbjct: 669 EAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLG 728
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M YG++P++EHY C+VD+L R G+ EA + M PD + SLLS+C+ +G L
Sbjct: 729 QMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDL 788
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++GE+++K+LL+ + YVLLSN YA GKW E ++R +MKE G+ K+ GCS IE+
Sbjct: 789 EIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEI 848
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
++ F++ D + ++I + +L++ + GY P T VLH++E+ K L HS
Sbjct: 849 GGMVYRFLVSDGSLSESKKIQQTWIKLEKKISKIGYKPDTSCVLHELEEEGKIKILKSHS 908
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GL++T TT+RV KNLR+C DCH+ IKL++ + KR IIVRD RFHHF+NG
Sbjct: 909 EKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKVVKRDIIVRDNKRFHHFKNGL 968
Query: 482 CSCGDYW 488
C+CGD+W
Sbjct: 969 CTCGDFW 975
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 156/368 (42%), Gaps = 72/368 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFD------------------- 42
G +HG KLG+ + LV++Y KCG +A LFD
Sbjct: 318 GMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSK 377
Query: 43 -----------------EMPECNDVVASTVMINCYVEHGL-------------------- 65
E N+V V+ C EH L
Sbjct: 378 EGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDEL 437
Query: 66 VENAF--------------EVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN 111
V NAF VF ++ K W A+I +NG ++LDLF M
Sbjct: 438 VANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSG 497
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
+ P+ TI +L AC++L L G+ IH +M ++ ++L+ +G +L+++Y +C +
Sbjct: 498 MDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGK 557
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
+F++M+ + + +N +I G + + EA++ FR+M++ GI+P ++ GVL ACS
Sbjct: 558 LIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVS 617
Query: 232 LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSL 291
+ LG E+ + + E ++D+ ++ G E++ + + D + +
Sbjct: 618 ALRLGKEVHSFALKAHLSEDAFVTCA-LIDMYAKCGCMEQSQNIFDRVN-EKDEAVWNVI 675
Query: 292 LSACKIHG 299
++ IHG
Sbjct: 676 IAGYGIHG 683
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 119/229 (51%), Gaps = 5/229 (2%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
NDVV ST +I Y G ++ VF K KD + A++ G RN A+ LF E+
Sbjct: 126 NDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLEL 185
Query: 108 -QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
++ P+ T+ CV AC+ + +ELG +H+ K + VG ALI MY +CG
Sbjct: 186 LSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGF 245
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI---NQGIRPTKVTFVGV 223
++ A++VFE M+ R++ ++NS++ + +G E +F+ ++ +G+ P T V V
Sbjct: 246 VESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTV 305
Query: 224 LNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
+ AC+ G V +G + + GI ++ +VD+ S+ G EA
Sbjct: 306 IPACAAVGEVRMGM-VVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEA 353
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 138/302 (45%), Gaps = 37/302 (12%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D +I Y + G VE+A +VF ++ ++ V W +++ NG +F+ +
Sbjct: 228 SDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRL 287
Query: 108 ---QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC 164
+ + + P+ T+V V+ AC+ +G + +G +H K I V +L++MYS+C
Sbjct: 288 LISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKC 347
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI-NQGIRPTKVTFVGV 223
G + +A +F+ ++V ++N++I G + G E+ +EM + +R +VT + V
Sbjct: 348 GYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNV 407
Query: 224 LNACS-----------HGGLVDLGF----EIFQSMTRDY--------------GIEPQ-I 253
L ACS HG GF + + Y G+E + +
Sbjct: 408 LPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTV 467
Query: 254 EHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKR 310
+ ++ ++ G P ++ D M + PD +GSLL AC L+ G++I
Sbjct: 468 SSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGF 527
Query: 311 LL 312
+L
Sbjct: 528 ML 529
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 128/285 (44%), Gaps = 17/285 (5%)
Query: 91 LVRNGEMARALDLFRE-MQRDNVRPNEVT---IVCVLSACSQLGALELGRWIHSYM-GKH 145
L +G + AL+L Q V ++++ I +L AC + +GR +H+ + H
Sbjct: 63 LCDSGNLNDALNLLHSHAQNGTVSSSDISKEAIGILLRACGHHKNIHVGRKVHALVSASH 122
Query: 146 RIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMF 205
++ + ++ +I MYS CG + VF+ KE+D+ YN+L++G + + +A+ +F
Sbjct: 123 KLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLF 182
Query: 206 REMIN-QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLS 264
E+++ + P T V AC+ V+LG E ++ G ++ +
Sbjct: 183 LELLSATDLAPDNFTLPCVAKACAGVADVELG-EAVHALALKAGGFSDAFVGNALIAMYG 241
Query: 265 RVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL----DCRSADSG 320
+ G E A M+ + + S++ AC +G + KRLL + D
Sbjct: 242 KCGFVESAVKVFETMR-NRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVA 300
Query: 321 TYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEI 365
T V + A A+ G+ + + + + G+ +E + VNN +
Sbjct: 301 TMVTVIPACAAVGEVRMGMVVHGLAFKLGITEE-----VTVNNSL 340
>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/489 (41%), Positives = 291/489 (59%), Gaps = 39/489 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G E+H ++K G S+ R L+ LY G A LFDE
Sbjct: 54 GHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDE------------------ 95
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
V+D V + MI G + AL LF EMQ + EVT+V
Sbjct: 96 --------------SLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSD----EVTLVA 137
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSAC++LGA +LG R H Y+ + N I+ A+++MY++CG ID AL++F + +
Sbjct: 138 VLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKN 197
Query: 181 DVT--TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
T +NS+IAGLA HG A+ +FRE+I+ G++P +VTFVGVL AC H GL++ G +
Sbjct: 198 MKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKK 257
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
+F+SM YGI+PQ+EHYGC+VDLL R G EEAYD + M + ++ +LLSAC+ H
Sbjct: 258 LFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTH 317
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
G +++GE ++LL+ + YVLLSN A + +W+EA Q+R M++ G++K PG S
Sbjct: 318 GNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSY 377
Query: 359 IEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALA 418
IE+ IH F+ D HPQ ++I ++++ +K GY P+T V+ DI++ EKE ++
Sbjct: 378 IELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNTAQVMFDIDEEEKESVVS 437
Query: 419 IHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFE 478
HSE+LA+ +GL+ P TIR+VKNLR+C DCH KL++ I R+I VRD RFHHF
Sbjct: 438 YHSEKLALAFGLMYCSPTDTIRIVKNLRICADCHKAFKLVSEIYGREITVRDTMRFHHFR 497
Query: 479 NGTCSCGDY 487
NG+CSC D+
Sbjct: 498 NGSCSCMDF 506
>gi|242094040|ref|XP_002437510.1| hypothetical protein SORBIDRAFT_10g028370 [Sorghum bicolor]
gi|241915733|gb|EER88877.1| hypothetical protein SORBIDRAFT_10g028370 [Sorghum bicolor]
Length = 653
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/478 (40%), Positives = 290/478 (60%), Gaps = 3/478 (0%)
Query: 13 GLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEV 72
G +R L+ Y CG+ A ++ DEM DV++ T ++ Y + +A EV
Sbjct: 177 GFDKHRFVENSLIGAYVACGDVGAARKVLDEM-VVKDVISWTSIVAAYSRSRDMGSAEEV 235
Query: 73 FSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGAL 132
F+ VKD V WTAM+ G +N +AL+ F +M + +EV++ +SAC+QLGA+
Sbjct: 236 FALCPVKDMVAWTAMVTGYAQNAMPVKALEAFEQMAGAGMPIDEVSLTGAISACAQLGAV 295
Query: 133 ELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGL 192
WI + + N +VG L++MY++CG ID+A +VFE M+E++V TY+S+I GL
Sbjct: 296 RRAVWIQEIADRSGLGRNVVVGSGLVDMYAKCGLIDEACRVFEGMQEKNVYTYSSMIVGL 355
Query: 193 AMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEP 251
A HGR+ +A+ +F +M+ + + P VTF+GVL ACSH G+V G F M YGI P
Sbjct: 356 ASHGRANDAIALFNDMVRRADVEPNHVTFIGVLTACSHAGMVKEGRYYFAQMKDRYGILP 415
Query: 252 QIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
+HY C+VDLL R G EA D + +M + P + G+LL AC+IHG ++ + A+ L
Sbjct: 416 SADHYTCMVDLLGRAGLVIEALDLVKSMTVEPHGGVWGALLGACRIHGNTKVAKVAAQHL 475
Query: 312 LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNE-IHEFIL 370
G YVLLSN AS+G+W E ++R M+ G++K+P SS E + +H+F
Sbjct: 476 FKLEPEGIGNYVLLSNTLASAGEWDEVSKVRKLMRIRGLKKDPAVSSFEGRDGLVHQFFA 535
Query: 371 GDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGL 430
GD HP +I K + EL+ +KL GY P V++++ D EKE L HSE+LA+ +GL
Sbjct: 536 GDNTHPWMHEIKKTLLELRARLKLAGYVPVLSSVVYNVSDEEKERLLMGHSEKLALSFGL 595
Query: 431 ISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
++ + ++IR+VKNLR+C DCH I+L++ + +IIVRD RFHHF +G CSCG +W
Sbjct: 596 LTLESRSSIRIVKNLRICEDCHLFIRLVSKVEPIEIIVRDNMRFHHFRDGECSCGGFW 653
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/504 (38%), Positives = 288/504 (57%), Gaps = 46/504 (9%)
Query: 1 EGREIHGQVLKLGLRSNRSTRL------------KLVELYGKCGEFKDAMQLFDEMPECN 48
+G EIH LK L S + L+++Y KC FK A +FD +P
Sbjct: 413 QGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPR-- 470
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM- 107
+ ++ V WT MI G + G+ AL +F EM
Sbjct: 471 ----------------------------RERNVVTWTVMIGGYAQYGDSNDALKIFSEMI 502
Query: 108 -QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRI--DLNHIVGGALINMYSRC 164
+ V PN TI C+L AC+ L AL +G+ IH+Y+ +H + V LI+MYS+C
Sbjct: 503 SKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKC 562
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL 224
GD+D A VF+ M +R+ ++ S+++G MHGR EA+++F +M G P ++F+ +L
Sbjct: 563 GDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLL 622
Query: 225 NACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPD 284
ACSH G+VD G F M RDY + EHY C++DLL+R GR ++A+ I M + P
Sbjct: 623 YACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPS 682
Query: 285 HIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAK 344
++ +LLSAC++H ++L E +L++ ++ + G+Y L+SN YA++ +WK+ +IR
Sbjct: 683 AVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQL 742
Query: 345 MKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVV 404
MK++G++K PGCS ++ F +GD HP +IY ++ L +K+ GY P T
Sbjct: 743 MKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFA 802
Query: 405 LHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKR 464
LHD++D EK L+ HSE+LA+ YGL++T P IR+ KNLRVC DCHS I+ I
Sbjct: 803 LHDVDDEEKNNLLSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDH 862
Query: 465 KIIVRDRNRFHHFENGTCSCGDYW 488
+IIVRD +RFHHF+NG+CSCG YW
Sbjct: 863 EIIVRDSSRFHHFKNGSCSCGGYW 886
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 172/319 (53%), Gaps = 23/319 (7%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
+EIH ++ G ++ L++ Y KCG DA+++F+ M E DVV+ M+ Y +
Sbjct: 279 KEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVM-EFKDVVSWNAMVTGYTQ 337
Query: 63 HGLVENAFEVFSRVKVK----DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVT 118
G AFE+F ++ + D + W+A+I G + G ALD F++M D PN VT
Sbjct: 338 SGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVT 397
Query: 119 IVCVLSACSQLGALELGRWIHSY-MGKHRIDLNH-----------IVGGALINMYSRCGD 166
I+ +LSAC+ LGAL G IH+Y + K + L++ +V ALI+MYS+C
Sbjct: 398 IISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRS 457
Query: 167 IDKALQVFEEM--KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ--GIRPTKVTFVG 222
A +F+ + +ER+V T+ +I G A +G S +A+++F EMI++ + P T
Sbjct: 458 FKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISC 517
Query: 223 VLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYG-CIVDLLSRVGRPEEAYDFITNMKI 281
+L AC+H + +G +I +TR + EP + C++D+ S+ G + A + +M
Sbjct: 518 ILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMP- 576
Query: 282 APDHIMLGSLLSACKIHGK 300
+ + S++S +HG+
Sbjct: 577 KRNEVSWTSMMSGYGMHGR 595
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 118/257 (45%), Gaps = 36/257 (14%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +HG + G SN LV +Y +CG +DA +FDE+
Sbjct: 168 GRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEI----------------- 210
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM------QRDNVRPN 115
+R + D + W +++ V+ AL+LF EM + N R +
Sbjct: 211 ------------TRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSD 258
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
++IV +L AC+ L AL + IHSY ++ + V ALI+ Y++CG ++ A++VF
Sbjct: 259 IISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFN 318
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
M+ +DV ++N+++ G G A E+F M + I +T+ V+ + G
Sbjct: 319 VMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQE 378
Query: 236 GFEIFQSMTRDYGIEPQ 252
+ FQ M D G EP
Sbjct: 379 ALDAFQQMILD-GSEPN 394
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 13/186 (6%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
T ++ Y+ G ++A V RV V W ++ ++ G + RA+ + M R +
Sbjct: 87 TGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTK 146
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
P+ T+ L AC +L + GR +H + + + N V AL+ MYSRCG ++ A V
Sbjct: 147 PDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLV 206
Query: 174 FEEMKER---DVTTYNSLIAGLAMHGRSIEAVEMFREM--------INQGIRPTKVTFVG 222
F+E+ + DV ++NS++A A+E+F EM N+ R ++ V
Sbjct: 207 FDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNE--RSDIISIVN 264
Query: 223 VLNACS 228
+L AC+
Sbjct: 265 ILPACA 270
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/436 (42%), Positives = 279/436 (63%), Gaps = 1/436 (0%)
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
S +++ Y + G +E A+ VFS++ VKD V W MI G +N AL LF EMQ+++
Sbjct: 793 SNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES- 851
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
RP+ +T+ C+L AC L ALE+GR IH + ++ V ALI+MY +CG + A
Sbjct: 852 RPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARL 911
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
+F+ + E+D+ T+ +I+G MHG EA+ F++M GI+P ++TF +L ACSH GL
Sbjct: 912 LFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGL 971
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
++ G+ F SM + +EP++EHY C+VDLL+R G +AY+ I M I PD + G+LL
Sbjct: 972 LNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALL 1031
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
C+IH ++L E++A+ + + ++G YVLL+N YA + KW+E ++R ++ + G++K
Sbjct: 1032 CGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKK 1091
Query: 353 EPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE 412
PGCS IEV + F+ D HPQ + I+ + L+ +K EG+SP L + D E
Sbjct: 1092 SPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRIKMKNEGHSPKMRYALINAGDME 1151
Query: 413 KEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRN 472
KE AL HSE+LA+ +G+++ TIRV KNLRVC+DCH M K ++ T+R+II+RD N
Sbjct: 1152 KEVALCGHSEKLAMAFGILNLPSGRTIRVAKNLRVCDDCHEMAKFMSKTTRREIILRDSN 1211
Query: 473 RFHHFENGTCSCGDYW 488
RFHHF++G CSC D+W
Sbjct: 1212 RFHHFKDGFCSCRDFW 1227
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 155/335 (46%), Gaps = 41/335 (12%)
Query: 11 KLGLRSNRSTR---LKLVELYGKCGEFKDAMQLFDEMP--ECNDVVASTVMINCYVEHGL 65
KLG+ N T LK G+ GE K ++ N VV S +I Y + G
Sbjct: 546 KLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNS--LIATYFKSGE 603
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
V++A ++F + +D V W +MI G V NG AL+ F +M V + T+V ++A
Sbjct: 604 VDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAA 663
Query: 126 CSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTY 185
C+ +G+L LGR +H K + L++MYS+CG+++ A+Q FE+M ++ V ++
Sbjct: 664 CANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSW 723
Query: 186 NSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR 245
SLIA G +A+ +F EM ++G+ P + VL+AC+ G +D G ++ + R
Sbjct: 724 TSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDV-HNYIR 782
Query: 246 DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIA----------------------- 282
+ + ++D+ ++ G EEAY + + +
Sbjct: 783 KNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALK 842
Query: 283 ----------PDHIMLGSLLSACKIHGKLQLGEQI 307
PD I + LL AC L++G I
Sbjct: 843 LFAEMQKESRPDGITMACLLPACGSLAALEIGRGI 877
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 142/298 (47%), Gaps = 35/298 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +HGQ +K L+++Y KCG DA+Q
Sbjct: 673 GRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQ---------------------- 710
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
F ++ K V WT++I VR G A+ LF EM+ V P+ ++
Sbjct: 711 ----------AFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTS 760
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL AC+ +L+ GR +H+Y+ K+ + L V AL++MY++CG +++A VF ++ +D
Sbjct: 761 VLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKD 820
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++N++I G + + EA+++F EM + RP +T +L AC +++G I
Sbjct: 821 IVSWNTMIGGYSKNSLPNEALKLFAEMQKES-RPDGITMACLLPACGSLAALEIGRGIHG 879
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+ R+ G ++ ++D+ + G A + +M D I ++S C +HG
Sbjct: 880 CILRN-GYSSELHVANALIDMYVKCGSLVHAR-LLFDMIPEKDLITWTVMISGCGMHG 935
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 111/236 (47%), Gaps = 31/236 (13%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+ +H + G+ KLV +Y CG ++ ++FD
Sbjct: 469 EGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFD------------------ 510
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
H L +N +VF W M+ + G+ ++ LF++MQ+ + N T
Sbjct: 511 --HILSDN--KVF---------LWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFS 557
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
C+L + LG + + IH + K + V +LI Y + G++D A ++F+E+ +R
Sbjct: 558 CILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDR 617
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
DV ++NS+I+G M+G S A+E F +M+ + T V + AC++ G + LG
Sbjct: 618 DVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLG 673
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 35/210 (16%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR IHG +L+ G S L+++Y KCG A LFD +PE
Sbjct: 874 GRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPE--------------- 918
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
KD + WT MI G +G A+ F++M+ ++P+E+T
Sbjct: 919 -----------------KDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTS 961
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
+L ACS G L G + +S + + ++ ++++ +R G++ KA + E M +
Sbjct: 962 ILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIK 1021
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
D T + +L+ G +H +E E E +
Sbjct: 1022 PDATIWGALLCGCRIH-HDVELAEKVAEHV 1050
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 125/296 (42%), Gaps = 47/296 (15%)
Query: 95 GEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG 154
G++ A++L R Q+ + N + +L C++ L+ G+ +HS + + I + ++G
Sbjct: 432 GDLRNAVELLRMSQKSELDLNAYS--SILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLG 489
Query: 155 GALINMYSRCGDIDKALQVFEE-MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGI 213
L+ MY CG + + ++F+ + + V +N +++ A G E++ +F++M GI
Sbjct: 490 AKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGI 549
Query: 214 RPTKVTF---------VGVLNACS--HGGLVDLGF----EIFQSMTRDYGIEPQIEH--- 255
TF +G + C HG + LGF + S+ Y +++
Sbjct: 550 TGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHK 609
Query: 256 -----------------YGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSAC 295
GC+++ G A +F M ++ D L + ++AC
Sbjct: 610 LFDELGDRDVVSWNSMISGCVMN-----GFSHSALEFFVQMLILRVGVDLATLVNSVAAC 664
Query: 296 KIHGKLQLGEQI-AKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
G L LG + + + C S + L + Y+ G +A+Q KM + V
Sbjct: 665 ANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTV 720
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/470 (43%), Positives = 289/470 (61%), Gaps = 9/470 (1%)
Query: 27 LYGK---CGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKD--T 81
L+GK C K + L DE +D++ +I+ Y + + A +F + KD
Sbjct: 384 LHGKETHCHAIKWILNL-DENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSV 442
Query: 82 VCWTAMIDGLVRNGEMARALDLFREM-QRDN-VRPNEVTIVCVLSACSQLGALELGRWIH 139
V WT +I G ++GE AL+LF +M Q DN V PN TI C L AC++LGAL GR IH
Sbjct: 443 VTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIH 502
Query: 140 SYMGKHRIDLNHI-VGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRS 198
+Y+ ++R + + V LI+MYS+ GD+D A VF+ M +R+ ++ SL+ G MHGR
Sbjct: 503 AYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRG 562
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGC 258
EA+++F EM G+ P VTFV VL ACSH G+VD G F M +D+G+ P EHY C
Sbjct: 563 EEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYAC 622
Query: 259 IVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSAD 318
+VDLLSR GR +EA + I M + P + +LLSAC+++ ++LGE A +LL+ S +
Sbjct: 623 MVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGN 682
Query: 319 SGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQR 378
G+Y LLSN YA++ WK+ +IR MK G++K PGCS ++ F GD HP
Sbjct: 683 DGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMS 742
Query: 379 EQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTT 438
+QIY +++L Q +K GY P LHD++D EK L+ HSE+LA+ YG+++T P
Sbjct: 743 QQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAP 802
Query: 439 IRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
IR+ KNLR C DCHS I+ I + +IIVRD +RFHHF+NG+CSC YW
Sbjct: 803 IRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 852
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 185/366 (50%), Gaps = 19/366 (5%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++HG L+ GL + +V++Y KCG ++A ++F+ M + DVV+ M+ Y
Sbjct: 250 GKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERM-KVKDVVSWNAMVTGYS 308
Query: 62 EHGLVENAFEVFSRVKVK----DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ G ++A +F +++ + + V W+A+I G + G ALD+FR+M+ PN V
Sbjct: 309 QIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVV 368
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH-------IVGGALINMYSRCGDIDKA 170
T+V +LS C+ G L G+ H + K ++L+ +V ALI+MYS+C A
Sbjct: 369 TLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAA 428
Query: 171 LQVFEEM--KERDVTTYNSLIAGLAMHGRSIEAVEMFREMI--NQGIRPTKVTFVGVLNA 226
+F+ + K+R V T+ LI G A HG + EA+E+F +M+ + + P T L A
Sbjct: 429 RAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMA 488
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
C+ G + G +I + R+ + C++D+ S+ G + A NM + +
Sbjct: 489 CARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMH-QRNGV 547
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG-TYVLLSNAYASSGKWKEAVQIRAKM 345
SL++ +HG+ + QI + G T+V++ A + SG + + M
Sbjct: 548 SWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGM 607
Query: 346 -KEAGV 350
K+ GV
Sbjct: 608 NKDFGV 613
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 150/332 (45%), Gaps = 67/332 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H V G N LV +YG+CG +++A Q+
Sbjct: 145 GASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQV--------------------- 183
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTIV 120
F+ V D V W +++ ++ G+ RA+ +F M D +RP+ V++V
Sbjct: 184 --------FDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLV 235
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL AC+ +GA G+ +H Y + + + VG A+++MY++CG +++A +VFE MK +
Sbjct: 236 NVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVK 295
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++N+++ G + GR +A+ +F ++ + I VT+ V+ + GL ++F
Sbjct: 296 DVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVF 355
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ M R G EP + + L SLLS C + G
Sbjct: 356 RQM-RLCGSEPNV--------------------------------VTLVSLLSGCALAGT 382
Query: 301 LQLGEQI----AKRLLDCRSADSGTYVLLSNA 328
L G++ K +L+ D G +++ NA
Sbjct: 383 LLHGKETHCHAIKWILNLDENDPGDDLMVINA 414
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 148/316 (46%), Gaps = 17/316 (5%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKD--TVCWTAMIDGLVRNGEMARALDLFREMQRDN 111
T +I+ Y+ A V R+ W +I V G + L L+R MQR
Sbjct: 62 THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLG 121
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
RP+ T VL AC ++ + G +H+ + + N VG L++MY RCG + A
Sbjct: 122 WRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENAR 181
Query: 172 QVFEEMKER---DVTTYNSLIAGLAMHGRSIEAVEMFREMI-NQGIRPTKVTFVGVLNAC 227
QVF+EM+ER D+ ++NS++A G SI A++MF M + GIRP V+ V VL AC
Sbjct: 182 QVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPAC 241
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
+ G G ++ R G+ + +VD+ ++ G EEA MK+ D +
Sbjct: 242 ASVGAWSRGKQVHGYALRS-GLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVK-DVVS 299
Query: 288 LGSLLSACKIHGK----LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRA 343
++++ G+ L L E+I + ++ T+ + YA G EA+ +
Sbjct: 300 WNAMVTGYSQIGRFDDALGLFEKIREEKIELNVV---TWSAVIAGYAQRGLGFEALDVFR 356
Query: 344 KMKEAGVQKEPGCSSI 359
+M+ G EP ++
Sbjct: 357 QMRLCG--SEPNVVTL 370
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/441 (41%), Positives = 280/441 (63%), Gaps = 1/441 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D++ ++N Y E LV+ A VF + KD V WT+MI V NG AL+LF +
Sbjct: 486 DILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLI 545
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
N+ P+ +T+V VL A + L +L+ G+ IH ++ + L ++ +L++MY+RCG ++
Sbjct: 546 ETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTME 605
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +F +K+RD+ + S+I MHG +A+++F +M ++ + P +TF+ +L ACS
Sbjct: 606 NARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACS 665
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLV G + F+ M +Y +EP EHY C+VDLL+R EEAY F+ NM I P +
Sbjct: 666 HSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVW 725
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+LL AC+IH LGE AK+LL + +SG YVL+SN +A+ G+W + ++R+ MK
Sbjct: 726 CALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGN 785
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLE-GYSPSTEVVLHD 407
++K+PGCS IEV N+IH F+ D HPQ IY K+ + +++K + GY T++V HD
Sbjct: 786 KLKKKPGCSWIEVENKIHTFMARDKSHPQCNNIYLKLAQFTKLLKEKGGYRAQTKLVFHD 845
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
+ + EK L HSERLA+ YGL+ T T +R+ KNLR+C+DCH+ K+ + I++R ++
Sbjct: 846 VCEEEKTQMLYGHSERLALGYGLLVTSKGTCLRITKNLRICDDCHAFFKIASEISQRTLV 905
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
VRD +RFHHFE G CSCGD+W
Sbjct: 906 VRDASRFHHFERGLCSCGDFW 926
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 142/299 (47%), Gaps = 37/299 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G E+H +K G+ SN L+++YGKC K F+ MPE
Sbjct: 371 GMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPE--------------- 415
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
KD + WT +I G +N AL+L R++Q + + + + I
Sbjct: 416 -----------------KDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGS 458
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L ACS L + +L + IH Y+ K + + ++ A++N+Y +D A VFE + +D
Sbjct: 459 ILLACSGLKSEKLIKEIHGYVLKGGL-ADILIQNAIVNVYGELALVDYARHVFESINSKD 517
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++ S+I +G +IEA+E+F +I I P +T V VL A + + G EI
Sbjct: 518 IVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHG 577
Query: 242 SMTRD-YGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+ R + +E I + +VD+ +R G E A + +K D I+ S+++A +HG
Sbjct: 578 FLIRKGFFLEGLIAN--SLVDMYARCGTMENARNIFNYVK-QRDLILWTSMINANGMHG 633
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 120/264 (45%), Gaps = 31/264 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G EIHG +K G L+ +Y KCG+ A LFD
Sbjct: 167 GCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDS------------------ 208
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
GL+E D V W ++I V GE AL LFR MQ V N T V
Sbjct: 209 --GLMEK----------DDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVS 256
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
L AC +++GR IH+ + K + V ALI MY+ CG ++ A +VF+ M +D
Sbjct: 257 ALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKD 316
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
++N+L++G+ + +A+ F++M + G +P +V+ + ++ A + G E+
Sbjct: 317 CVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEV-H 375
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSR 265
+ +GI+ + ++D+ +
Sbjct: 376 AYAIKHGIDSNMHIGNSLIDMYGK 399
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 136/297 (45%), Gaps = 42/297 (14%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
DV S +I Y G +E+A VF + KD V W ++ G+V+N + A++ F++M
Sbjct: 284 TDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDM 343
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
Q +P++V+++ +++A + L G +H+Y KH ID N +G +LI+MY +C +
Sbjct: 344 QDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCV 403
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
FE M E+D+ ++ ++IAG A + ++A+ + R++ + + + +L AC
Sbjct: 404 KYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLAC 463
Query: 228 S-----------HG-----------------------GLVDLGFEIFQSMTRDYGIEPQI 253
S HG LVD +F+S+ I
Sbjct: 464 SGLKSEKLIKEIHGYVLKGGLADILIQNAIVNVYGELALVDYARHVFESIN-----SKDI 518
Query: 254 EHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQI 307
+ ++ G EA + ++ I PD I L S+L A L+ G++I
Sbjct: 519 VSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEI 575
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 103/239 (43%), Gaps = 35/239 (14%)
Query: 1 EGREIHGQVLKL-GLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINC 59
+G+++H LK + K V +YGKCG F DA++
Sbjct: 64 QGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVK-------------------- 103
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
VF ++ + W AMI V G A++L++EM+ V + T
Sbjct: 104 ------------VFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTF 151
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE--M 177
CVL AC LG IH K V ALI MY++CGD+ A +F+ M
Sbjct: 152 PCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLM 211
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
++ D ++NS+I+ G S+EA+ +FR M G+ TFV L AC + +G
Sbjct: 212 EKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIG 270
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHI-VGGALINMYSRCGDIDKALQVFEEMKER 180
L C+ AL G+ +H++ K + L+ + + ++MY +CG A++VF++M ER
Sbjct: 52 ALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSER 111
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+ T+N++I GR +EA+E+++EM G+ TF VL AC LG EI
Sbjct: 112 TIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEI 170
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 87/200 (43%), Gaps = 34/200 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+EIHG +++ G LV++Y +CG ++A +F+ + + D++ T MIN
Sbjct: 571 KGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQ-RDLILWTSMINAN 629
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG ++ A+DLF +M +NV P+ +T +
Sbjct: 630 GMHGCGKD-------------------------------AIDLFSKMTDENVLPDHITFL 658
Query: 121 CVLSACSQLGALELGRWIHSYM-GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
+L ACS G + G+ M +++++ L+++ +R +++A M
Sbjct: 659 ALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPI 718
Query: 179 ERDVTTYNSLIAGLAMHGRS 198
E + +L+ +H +
Sbjct: 719 EPSAEVWCALLGACRIHSNN 738
>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 755
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/487 (39%), Positives = 299/487 (61%), Gaps = 16/487 (3%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++HG+VL GL S+ R LVE+YGKCG A + ++P
Sbjct: 285 GRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPL--------------- 329
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ L + F V + V W++M+ G V NG+ + FR M + + + T+
Sbjct: 330 -NFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVAT 388
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
++SAC+ G LE G+ IH+Y+ K + ++ VG +LI+MYS+ G +D AL +FE++KE +
Sbjct: 389 IISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPN 448
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V + S+I+G A+HG+ EA+ +F M+N GI P +VTFVGVLNACSH GL++ G F+
Sbjct: 449 VVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFR 508
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M Y I P++EHY +V+L R G EA +FI I+ + S LS+C++H
Sbjct: 509 MMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNF 568
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+G+ +++ LL +D Y+LLSN +S+ +W EA +R+ M + GV+K+PG S +++
Sbjct: 569 NMGKSVSEMLLQSAPSDPDAYILLSNMCSSNHQWDEAAIVRSLMYQRGVKKQPGQSWVQL 628
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
++IH F +GD HPQ ++IY + L +K GYS ++V+ D+E+ + E ++ HS
Sbjct: 629 KDQIHSFTVGDRSHPQDKEIYSYLDSLIGRLKEIGYSLDAKLVMQDVEEEQGEVLISHHS 688
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ + +I+T P T IR++KNLR+CNDCH+ K + + +R+IIVRD +RFHHF+ +
Sbjct: 689 EKLALVFSIINTSPRTPIRIMKNLRICNDCHNFFKYASQLLEREIIVRDTHRFHHFKQSS 748
Query: 482 CSCGDYW 488
CSCG+YW
Sbjct: 749 CSCGEYW 755
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 181/367 (49%), Gaps = 26/367 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ IH +L+ G+ + +++LY KC EF+ A F+ M E DVV+ +MI Y+
Sbjct: 153 GKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIE-KDVVSWNIMIGAYL 211
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G VE + E+F KD V W +IDGL++ G AL+ M + VT
Sbjct: 212 REGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSI 271
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF------- 174
L S L +E+GR +H + ++ + + +L+ MY +CG +DKA +
Sbjct: 272 ALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNF 331
Query: 175 ----------EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL 224
+E K R V +++S+++G +G+ + ++ FR M+ + I T ++
Sbjct: 332 LRKGNFGVTCKEPKARMV-SWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATII 390
Query: 225 NACSHGGLVDLGFEIFQSMTRDYGIEPQIEHY--GCIVDLLSRVGRPEEAYDFITNMKIA 282
+AC++ G+++ G +I + + I +I+ Y ++D+ S+ G ++A +K
Sbjct: 391 SACANAGILEFGKQIHAYIQK---IGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIK-E 446
Query: 283 PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNAYASSGKWKEAVQI 341
P+ ++ S++S C +HG+ + + + +L+ + T+V + NA + G +E +
Sbjct: 447 PNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRY 506
Query: 342 RAKMKEA 348
MK+
Sbjct: 507 FRMMKDT 513
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 103/188 (54%), Gaps = 10/188 (5%)
Query: 52 ASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRN-GEMARALDLFREMQRD 110
++ ++ YV+ +++A ++F + K+T WT +I G R G LFREMQ D
Sbjct: 69 SANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQAD 128
Query: 111 NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
PN+ T+ VL CS+ ++ G+ IH+++ ++ + + ++ +++++Y +C + + A
Sbjct: 129 GACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYA 188
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
FE M E+DV ++N +I G +++EMFR N+ + V++ +++
Sbjct: 189 ESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDV----VSWNTIID----- 239
Query: 231 GLVDLGFE 238
GL+ G+E
Sbjct: 240 GLIQCGYE 247
>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
Length = 611
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/442 (45%), Positives = 289/442 (65%), Gaps = 2/442 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVK-VKDTVCWTAMIDGLVRNGEMARALDLFREM 107
DVV T ++N Y + G +E A +VF ++ D+VCW AMI ++G +ALDL+R M
Sbjct: 170 DVVVGTALLNMYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSM 229
Query: 108 Q-RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
++ P + T V V+ C++L AL+ GR IH+ + D N +V AL++MY +CG
Sbjct: 230 HDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGC 289
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+D+AL VF MK +D ++N++I+ A HG S +A+ +++EM QG++PT+VTFVG+L+A
Sbjct: 290 LDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSA 349
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
CSHGGLV G + F M D+ I+P + H+GCI+DLL R GR EA + +M I + +
Sbjct: 350 CSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAV 409
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
SLL ACK HG L+ G + A +++D SG YVLLSN YA++G+WK+ +IR M
Sbjct: 410 QWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMA 469
Query: 347 EAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH 406
GV+K PG S IE+ + +HEF+ GD HPQ E+IY ++ ++ + +K GY P T V H
Sbjct: 470 ARGVKKSPGKSWIEIGDVVHEFVSGDRSHPQGEEIYVELGKMVEEMKGLGYVPDTSSVFH 529
Query: 407 DIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKI 466
D+E+ EKE L HSE+LAI YG + + +R+VKNLRVC DCH+ K ++ IT RKI
Sbjct: 530 DLEEEEKEDLLVCHSEKLAIVYGNMVVPGKSMLRIVKNLRVCLDCHTATKFMSRITGRKI 589
Query: 467 IVRDRNRFHHFENGTCSCGDYW 488
+VRD RFH FENG+CSC DYW
Sbjct: 590 VVRDAARFHLFENGSCSCRDYW 611
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 143/257 (55%), Gaps = 8/257 (3%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM- 107
+VV T +I+ Y + G +++A F ++ K++V W AM+ +G AL+LFREM
Sbjct: 65 NVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMC 124
Query: 108 -QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH--IVGGALINMYSRC 164
+ + RP++ + + ACS L LE GR IH + + +L+ +VG AL+NMYS+C
Sbjct: 125 ERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKC 184
Query: 165 GDIDKALQVFEEMK-ERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN-QGIRPTKVTFVG 222
GD+++A +VF+ ++ + D +N++IA A HGR +A++++R M + + P + TFV
Sbjct: 185 GDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVT 244
Query: 223 VLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIA 282
V++ C+ + G I + R + + +V + + G +EA D +MK+
Sbjct: 245 VIDVCAELSALKQGRAI-HARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKL- 302
Query: 283 PDHIMLGSLLSACKIHG 299
D I +++S+ HG
Sbjct: 303 KDEISWNTIISSYAYHG 319
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 138/260 (53%), Gaps = 7/260 (2%)
Query: 94 NGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGA--LELGRWIHSYMGKHRIDLNH 151
NG + AL FR M + RP+ VT +L+A +Q+GA ++ GR IH Y + N
Sbjct: 7 NGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNV 66
Query: 152 IVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI-- 209
+VG A+I+MY +CG +D A FEE++ ++ T+N+++ + GR EA+E+FREM
Sbjct: 67 VVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMCER 126
Query: 210 NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRD-YGIEPQIEHYGCIVDLLSRVGR 268
++ RP K +F + ACS+ ++ G EI + + R+ + + ++++ S+ G
Sbjct: 127 SRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCGD 186
Query: 269 PEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR--SADSGTYVLLS 326
EEA +++ D + ++++A HG+ + + + + D + GT+V +
Sbjct: 187 LEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVI 246
Query: 327 NAYASSGKWKEAVQIRAKMK 346
+ A K+ I A+++
Sbjct: 247 DVCAELSALKQGRAIHARVR 266
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/437 (43%), Positives = 281/437 (64%), Gaps = 2/437 (0%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD--N 111
T +++ Y G V+ A VF + V++ V W+AMI +NG+ AL FREM R+ +
Sbjct: 221 TTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKD 280
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
PN VT+V VL AC+ L ALE G+ IH Y+ + +D V AL+ MY RCG ++
Sbjct: 281 SSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQ 340
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
+VF+ M +RDV ++NSLI+ +HG +A+++F EM+ G PT VTFV VL ACSH G
Sbjct: 341 RVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEG 400
Query: 232 LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSL 291
LV+ G +F++M RD+GI+PQIEHY C+VDLL R R +EA + +M+ P + GSL
Sbjct: 401 LVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSL 460
Query: 292 LSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
L +C+IHG ++L E+ ++RL ++G YVLL++ YA + W E +++ ++ G+Q
Sbjct: 461 LGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQ 520
Query: 352 KEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDW 411
K PG +EV +++ F+ D +P EQI+ + +L + +K +GY P T+ VL+++E
Sbjct: 521 KLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETE 580
Query: 412 EKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDR 471
EKE + HSE+LA+ +GLI+T IR+ KNLR+C DCH K I+ +++I+VRD
Sbjct: 581 EKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDV 640
Query: 472 NRFHHFENGTCSCGDYW 488
NRFH F+NG CSCGDYW
Sbjct: 641 NRFHRFKNGVCSCGDYW 657
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 148/314 (47%), Gaps = 10/314 (3%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
D +T +I Y + G V+ A +VF + + + W A+ L G L L+ +M
Sbjct: 110 QDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKM 169
Query: 108 QRDNVRPNEVTIVCVLSAC----SQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSR 163
R V + T VL AC + L G+ IH+++ + + + L++MY+R
Sbjct: 170 NRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYAR 229
Query: 164 CGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI--NQGIRPTKVTFV 221
G +D A VF M R+V +++++IA A +G++ EA+ FREM+ + P VT V
Sbjct: 230 FGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMV 289
Query: 222 GVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKI 281
VL AC+ ++ G I + R G++ + +V + R G+ E M
Sbjct: 290 SVLQACASLAALEQGKLIHGYILRR-GLDSILPVISALVTMYGRCGKLEVGQRVFDRMH- 347
Query: 282 APDHIMLGSLLSACKIHGKLQLGEQIAKRLL-DCRSADSGTYVLLSNAYASSGKWKEAVQ 340
D + SL+S+ +HG + QI + +L + S T+V + A + G +E +
Sbjct: 348 DRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKR 407
Query: 341 IRAKM-KEAGVQKE 353
+ M ++ G++ +
Sbjct: 408 LFETMWRDHGIKPQ 421
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 34/198 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ IHG +L+ GL S LV +YG+CG+ + ++FD M + DVV+ +I+ Y
Sbjct: 303 QGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHD-RDVVSWNSLISSY 361
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG + +A+ +F EM + P VT V
Sbjct: 362 GVHGYGK-------------------------------KAIQIFEEMLANGASPTPVTFV 390
Query: 121 CVLSACSQLGALELGRWIHSYMGK-HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
VL ACS G +E G+ + M + H I ++++ R +D+A ++ ++M+
Sbjct: 391 SVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRT 450
Query: 179 ERDVTTYNSLIAGLAMHG 196
E + SL+ +HG
Sbjct: 451 EPGPKVWGSLLGSCRIHG 468
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 134/343 (39%), Gaps = 83/343 (24%)
Query: 87 MIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHR 146
+I L + G++ +A+ + + + + E+ I+C C +L +H ++ +
Sbjct: 52 LIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILC----CGHRSSLSDALRVHRHILDNG 107
Query: 147 IDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
D + + LI MYS G +D A +VF++ ++R + +N+L L + G E + ++
Sbjct: 108 SDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYW 167
Query: 207 EMINQGIRPTKVTFVGVLNAC--SHGGLVDL--GFEIFQSMTRDYGIEPQIEHYGCIVDL 262
+M G+ + T+ VL AC S + L G EI +TR G + +VD+
Sbjct: 168 KMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRR-GYSSHVYIMTTLVDM 226
Query: 263 LSRVGRPEEAYDFITNMKI------------------------------------APDHI 286
+R G + A M + +P+ +
Sbjct: 227 YARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSV 286
Query: 287 MLGSLLSACK----------IH-------------------------GKLQLGEQIAKRL 311
+ S+L AC IH GKL++G+++ R+
Sbjct: 287 TMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRM 346
Query: 312 LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
D D ++ L ++Y G K+A+QI +M G P
Sbjct: 347 HD---RDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTP 386
>gi|346703119|emb|CBX25218.1| hypothetical_protein [Oryza brachyantha]
Length = 596
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/455 (41%), Positives = 276/455 (60%), Gaps = 7/455 (1%)
Query: 41 FDEMPECN----DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGE 96
F ++P C+ V+++ + G + + VF R+ D W A++ +R
Sbjct: 142 FSQIPRCSCRLLRSCPRAVLLDVFTRCGRIASCRRVFDRIACPDLPAWNALLSAYMRCAS 201
Query: 97 MAR--ALDLFREM-QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIV 153
A L+LF M VRPNE+T+V V+ AC +LGAL G W H+Y+ K ++ +N IV
Sbjct: 202 SAADAILELFSRMISLGTVRPNEITLVAVIGACGELGALGHGVWAHTYLVKRQLAINRIV 261
Query: 154 GGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGI 213
AL+ MY+ CG +D A VF +RD YN+++ GLA HG A+++F M G+
Sbjct: 262 TTALVEMYAGCGRLDLAEHVFATASDRDTRCYNAMLQGLAAHGHGRAALDLFDRMRGSGV 321
Query: 214 RPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAY 273
VT + VL +C+H LVD G E F M ++GIEP+IEHYGC+VD+LSR GR ++A
Sbjct: 322 PVDGVTILSVLCSCAHAELVDEGLEYFDKMEIEFGIEPRIEHYGCVVDMLSRAGRLDDAE 381
Query: 274 DFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSG 333
I M I P+ + SL+ AC IHG L+LGE++ L DSG +VL++N YA
Sbjct: 382 KLIHEMPIVPNAAIYRSLIRACDIHGNLELGERMITELRQHDPDDSGNHVLIANLYARMN 441
Query: 334 KWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVK 393
+W+EA + R +MK G+ K PG S +++N +HEF++GD HP ++IY ++E++ +
Sbjct: 442 RWEEAKKTRKEMKSMGIDKSPGSSLLDMNGVLHEFLVGDKTHPASKEIYTMVEEIEARLS 501
Query: 394 LEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHS 453
G+ ST VL D+E+ +K L HSERLAI + LI++ P T IR++KNLRVC DCH
Sbjct: 502 EHGHRSSTTSVLFDVEEEDKADTLTYHSERLAIPFALIASDPGTPIRIIKNLRVCADCHE 561
Query: 454 MIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
KL++ + R+I++RDR RFHHF G CSCGD+W
Sbjct: 562 SAKLVSRVYGREIVMRDRTRFHHFREGECSCGDFW 596
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 88/213 (41%), Gaps = 48/213 (22%)
Query: 6 HGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGL 65
H ++K L NR LVE+Y CG A EH
Sbjct: 247 HTYLVKRQLAINRIVTTALVEMYAGCGRLDLA------------------------EH-- 280
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
VF+ +DT C+ AM+ GL +G ALDLF M+ V + VTI+ VL +
Sbjct: 281 ------VFATASDRDTRCYNAMLQGLAAHGHGRAALDLFDRMRGSGVPVDGVTILSVLCS 334
Query: 126 CSQLGALELGRWIHSYMGKHRID------LNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
C+ ++ G Y K I+ + H G +++M SR G +D A ++ EM
Sbjct: 335 CAHAELVDEGL---EYFDKMEIEFGIEPRIEHY--GCVVDMLSRAGRLDDAEKLIHEMPI 389
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ 211
+ Y SLI +HG +E+ MI +
Sbjct: 390 VPNAAIYRSLIRACDIHGN----LELGERMITE 418
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/437 (43%), Positives = 279/437 (63%), Gaps = 1/437 (0%)
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
+T +++ YV+ G V + VF + KD V W+AM+ GL + + +A+++F ++ ++ V
Sbjct: 442 ATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGV 501
Query: 113 RPNEVTIVCVLSACSQLGA-LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
+PNE T V++ACS A +E G+ IH+ K V AL+ MYS+ G+I+ A
Sbjct: 502 KPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAE 561
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
+VF +ERD+ ++NS+I G HG + +A+E+F+ M NQG+ VTF+GVL AC+H G
Sbjct: 562 KVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAG 621
Query: 232 LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSL 291
LV+ G + F M +DY I+ + EHY C+VDL SR G ++A D I M + +L
Sbjct: 622 LVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTL 681
Query: 292 LSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
L+AC++H L+LG+ A++L+ + D+ YVLLSN +A +G W+E +R M E V+
Sbjct: 682 LAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVK 741
Query: 352 KEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDW 411
KE GCS IE+ N I F+ GD+ HP + +Y K++EL +K GY P T V HD+E+
Sbjct: 742 KEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEE 801
Query: 412 EKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDR 471
KE L+ HSERLAI YGLI+ P I++ KNLR+C DCH++I+LI+ I +R +IVRD
Sbjct: 802 HKEAILSQHSERLAIAYGLIALPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDS 861
Query: 472 NRFHHFENGTCSCGDYW 488
NRFHHF+ G CSCG YW
Sbjct: 862 NRFHHFKGGVCSCGGYW 878
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 110/253 (43%), Gaps = 43/253 (16%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H Q LK G + S LV++Y K +F+D +FDEM
Sbjct: 123 GRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEM----------------- 165
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+K+ V WT+++ G RNG + L +MQ + V PN T
Sbjct: 166 ---------------GIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFAT 210
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL A + +E G +H+ + K+ + V ALI MY + + A VF+ M RD
Sbjct: 211 VLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRD 270
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HG 230
T+N +I G A G +E +MF M G++ ++ F L CS H
Sbjct: 271 SVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHC 330
Query: 231 GLVDLGFEIFQSM 243
G+V G+E Q +
Sbjct: 331 GVVKNGYEFAQDI 343
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 1/170 (0%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+I Y++ +V +A VF + V+D+V W MI G G +F M+ V+ +
Sbjct: 246 LICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLS 305
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
L CSQ L + +H + K+ + + AL+ YS+C +D+A ++F
Sbjct: 306 RTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFS 365
Query: 176 EM-KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL 224
+V T+ ++I G + + +AV++F +M +G+RP T+ VL
Sbjct: 366 MADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVL 415
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 89/178 (50%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A ++F +KD + ++ RN AL LF+++ + + +T+ C L C
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
L +GR +H K + VG +L++MY + D + +F+EM ++V ++ SL
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176
Query: 189 IAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRD 246
++G A +G + E + + +M +G+ P TF VL A + +++ G ++ + ++
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN 234
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 90/157 (57%), Gaps = 3/157 (1%)
Query: 46 ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
+ N + S+ ++ Y + G +E+A +VF+R + +D V W +MI G ++G+ +AL++F+
Sbjct: 537 KSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQ 596
Query: 106 EMQRDNVRPNEVTIVCVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRC 164
MQ + ++VT + VL+AC+ G +E G ++ + + + ID ++++YSR
Sbjct: 597 IMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRA 656
Query: 165 GDIDKALQVFEEMK-ERDVTTYNSLIAGLAMHGRSIE 200
G DKA+ + M T + +L+A +H R++E
Sbjct: 657 GMFDKAMDIINGMPFPASPTIWRTLLAACRVH-RNLE 692
>gi|125554650|gb|EAZ00256.1| hypothetical protein OsI_22267 [Oryza sativa Indica Group]
Length = 602
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/440 (42%), Positives = 273/440 (62%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DVV+ T M+ GLV++A EVF + ++ V W +MI G V+ AL++F EM+
Sbjct: 163 DVVSWTTMVGGLCRLGLVDDAREVFDAMPARNLVSWNSMISGYVKADRFLDALEVFDEMR 222
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
V N L AC+ GAL GR I+ ++ + I+++ + A+++MY +CG +D
Sbjct: 223 ALGVEGNGFVATSALVACTGAGALGRGREIYRWVEQSGIEVDAKLATAVVDMYCKCGCVD 282
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+A +VF+ + R +TT+N +I G A+HGR +A+E+F +M G+ P VT + VL AC+
Sbjct: 283 EAWRVFDSLPARGLTTWNCMIGGFAVHGRCDDALELFHQMEAAGVAPDDVTLLNVLTACA 342
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H G V G + +GIEP+ EHYGC+VDL R G+ +EA I M + PD +L
Sbjct: 343 HAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEMPMDPDLAVL 402
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
G+LL ACKIHG + LGE I R++D +SG YVLL+N A +G+W E ++R M E
Sbjct: 403 GALLGACKIHGDVDLGEAIGWRVIDLDPDNSGRYVLLANLLAGAGRWDEVGKVRRLMDER 462
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
V KE G S IEV+ E EF G++RHPQ +IY ++ ++ EGY P T LHD+
Sbjct: 463 NVSKEAGRSVIEVDGEACEFRCGNLRHPQAREIYAMAVDMVSRIRAEGYVPDTGEALHDV 522
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
+ +KE AL HSE+LAI +GL+ +P T+R+ KNLRVC DCH K ++ + R+I+V
Sbjct: 523 AEEDKEAALLCHSEKLAIAFGLLRARPRETLRITKNLRVCRDCHEATKYVSRVFGREIVV 582
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RDR+RFHHF++G CSC DYW
Sbjct: 583 RDRSRFHHFKDGMCSCKDYW 602
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 93/197 (47%), Gaps = 34/197 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GREI+ V + G+ + +V++Y KCG +A ++FD +P + MI +
Sbjct: 249 GREIYRWVEQSGIEVDAKLATAVVDMYCKCGCVDEAWRVFDSLP-ARGLTTWNCMIGGFA 307
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG ++A E LF +M+ V P++VT++
Sbjct: 308 VHGRCDDALE-------------------------------LFHQMEAAGVAPDDVTLLN 336
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VL+AC+ G + G R+++ + +H I+ G +++++ R G +D+A +V +EM +
Sbjct: 337 VLTACAHAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEMPMD 396
Query: 180 RDVTTYNSLIAGLAMHG 196
D+ +L+ +HG
Sbjct: 397 PDLAVLGALLGACKIHG 413
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/436 (44%), Positives = 290/436 (66%), Gaps = 6/436 (1%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNV 112
T +++ Y + G +++A ++F+ + ++ V W +MI G +NG+ A A++LF+EM +
Sbjct: 299 TALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKL 358
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
P+EVT+V V+SAC LGALELG W+ ++ +++I L+ A+I MYSRCG ++ A +
Sbjct: 359 TPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKR 418
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
VF+EM RDV +YN+LI+G A HG +EA+ + M GI P +VTF+GVL ACSH GL
Sbjct: 419 VFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGL 478
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
++ G ++F+S+ +P I+HY C+VDLL RVG E+A + M + P + GSLL
Sbjct: 479 LEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLL 533
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
+A +IH +++LGE A +L + +SG ++LLSN YAS+G+WK+ +IR MK+ GV+K
Sbjct: 534 NASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKK 593
Query: 353 EPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE 412
G S +E ++H+FI+ D H + + IY+ + EL++ ++ GY VL D+E+ E
Sbjct: 594 TTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEE 653
Query: 413 KEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRN 472
KE + HSE+LAICY L+ ++ IRVVKNLRVC DCH+ IK+I+ + R IIVRD N
Sbjct: 654 KEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNN 713
Query: 473 RFHHFENGTCSCGDYW 488
RFH F +G CSC DYW
Sbjct: 714 RFHCFNDGLCSCKDYW 729
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 178/379 (46%), Gaps = 68/379 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN------------- 48
G H VLKLG S+ R ++++Y + G A ++FDE+P+
Sbjct: 114 GIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGY 173
Query: 49 -------------------DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMID 89
+V+ T M+ Y + +E A F + + V W AM+
Sbjct: 174 WKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLS 233
Query: 90 GLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDL 149
G +NG AL LF EM + P+E T V V+SACS G L + + + RI L
Sbjct: 234 GYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQL 293
Query: 150 NHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
N V AL++MY++ GD+D A ++F M R+V T+NS+IAG A +G+S A+E+F+EMI
Sbjct: 294 NCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMI 353
Query: 210 N-QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGR 268
+ + P +VT V V++AC H G ++LG + + +T + I+ I + ++ + SR G
Sbjct: 354 TAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQ-IKLSISGHNAMIFMYSRCGS 412
Query: 269 PE-------------------------------EAYDFITNMK---IAPDHIMLGSLLSA 294
E EA + ++ MK I PD + +L+A
Sbjct: 413 MEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTA 472
Query: 295 CKIHGKLQLGEQIAKRLLD 313
C G L+ G ++ + + D
Sbjct: 473 CSHAGLLEEGRKVFESIKD 491
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 108/245 (44%), Gaps = 19/245 (7%)
Query: 72 VFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGA 131
+F+ + +T+M+ + A+ + ++ +MQ VRP+ ++ + G
Sbjct: 56 LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTGG- 114
Query: 132 LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK--ERDVTTYNSLI 189
+G H+++ K + V A+I+MY+R G I A +VF+E+ ER V +N+++
Sbjct: 115 --IG--FHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMV 170
Query: 190 AGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGI 249
+G +A +F M + + +T+ ++ + ++ F M
Sbjct: 171 SGYWKWESEGQAQWLFDVMPERNV----ITWTAMVTGYAKVKDLEAARRYFDCMP----- 221
Query: 250 EPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQ 306
E + + ++ ++ G EEA +D + N I PD +++SAC G L
Sbjct: 222 ERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAAS 281
Query: 307 IAKRL 311
+ + L
Sbjct: 282 LVRTL 286
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/504 (41%), Positives = 300/504 (59%), Gaps = 17/504 (3%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVE--------LYGK---CGEFKDAMQLFDEMPECND 49
E ++ Q+L G N T + L+ L+GK C K + L DE +D
Sbjct: 369 EALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNL-DENDPGDD 427
Query: 50 VVASTVMINCYVEHGLVENAFEVFSRVKVKD--TVCWTAMIDGLVRNGEMARALDLFREM 107
++ +I+ Y + + A +F + KD V WT +I G ++GE AL+LF +M
Sbjct: 428 LMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQM 487
Query: 108 -QRDN-VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHI-VGGALINMYSRC 164
Q DN V PN TI C L AC++LGAL GR IH+Y+ ++R + + V LI+MYS+
Sbjct: 488 LQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKS 547
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL 224
GD+D A VF+ M +R+ ++ SL+ G MHGR EA+++F EM + P VTFV VL
Sbjct: 548 GDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVL 607
Query: 225 NACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPD 284
ACSH G+VD G F M +D+G+ P EHY C+VDLLSR GR +EA + I M + P
Sbjct: 608 YACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPT 667
Query: 285 HIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAK 344
+ +LLSAC+++ ++LGE A +LL+ S + G+Y LLSN YA++ WK+ +IR
Sbjct: 668 PAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYL 727
Query: 345 MKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVV 404
MK G++K PGCS ++ F GD HP +QIY +++L Q +K GY P
Sbjct: 728 MKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFA 787
Query: 405 LHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKR 464
LHD++D EK L+ HSE+LA+ YG+++T P IR+ KNLR C DCHS I+ I +
Sbjct: 788 LHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRACGDCHSAFTYISIIIEH 847
Query: 465 KIIVRDRNRFHHFENGTCSCGDYW 488
+IIVRD +RFHHF+NG+CSC YW
Sbjct: 848 EIIVRDSSRFHHFKNGSCSCRGYW 871
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 187/369 (50%), Gaps = 25/369 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++HG L+ GL + +V++Y KCG ++A ++F+ M + DVV+ M+ Y
Sbjct: 269 GKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERM-KVKDVVSWNAMVTGYS 327
Query: 62 EHGLVENAFEVFSRVKVK----DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ G ++A +F +++ + + V W+A+I G + G ALD+FR+M PN V
Sbjct: 328 QIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVV 387
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH-------IVGGALINMYSRCGDIDKA 170
T+V +LS C+ G L G+ H + K ++L+ +V ALI+MYS+C A
Sbjct: 388 TLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAA 447
Query: 171 LQVFEEM--KERDVTTYNSLIAGLAMHGRSIEAVEMFREMI--NQGIRPTKVTFVGVLNA 226
+F+ + K+R V T+ LI G A HG + EA+E+F +M+ + + P T L A
Sbjct: 448 RAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMA 507
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
C+ G + G +I + R+ + C++D+ S+ G + A NM + +
Sbjct: 508 CARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMH-QRNGV 566
Query: 287 MLGSLLSACKIHGK----LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIR 342
SL++ +HG+ LQ+ ++ K L D T+V++ A + SG + +
Sbjct: 567 SWTSLMTGYGMHGRGEEALQIFYEMQKVXL---VPDGVTFVVVLYACSHSGMVDQGINYF 623
Query: 343 AKM-KEAGV 350
M K+ GV
Sbjct: 624 NGMNKDFGV 632
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 133/264 (50%), Gaps = 34/264 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H V G N LV +YG+CG +++A Q+FDEM E
Sbjct: 164 GASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERG------------- 210
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTIV 120
V D V W +++ ++ G+ RA+ +F M D +RP+ V++V
Sbjct: 211 ----------------VGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLV 254
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL AC+ +GA G+ +H Y + + + VG A+++MY++CG +++A +VFE MK +
Sbjct: 255 NVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVK 314
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++N+++ G + GR +A+ +F ++ + I VT+ V+ + GL ++F
Sbjct: 315 DVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVF 374
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLS 264
+ M G EP + +V LLS
Sbjct: 375 RQMLL-CGSEPNVV---TLVSLLS 394
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 114/234 (48%), Gaps = 7/234 (2%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKD--TVCWTAMIDGLVRNGEMARALDLFREMQRDN 111
T +I+ Y+ A V R+ W +I V G + L L+R MQR
Sbjct: 81 THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLG 140
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
RP+ T VL AC ++ + G +H+ + + N VG L++MY RCG + A
Sbjct: 141 WRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENAR 200
Query: 172 QVFEEMKER---DVTTYNSLIAGLAMHGRSIEAVEMFREMI-NQGIRPTKVTFVGVLNAC 227
QVF+EM+ER D+ ++NS++A G SI A++MF M + GIRP V+ V VL AC
Sbjct: 201 QVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPAC 260
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKI 281
+ G G ++ R G+ + +VD+ ++ G EEA MK+
Sbjct: 261 ASVGAWSRGKQVHGYALRS-GLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKV 313
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/440 (43%), Positives = 280/440 (63%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D+ A +++ Y + GL+ A +F + +KDT+ + A++ G V+NG+ A +F++MQ
Sbjct: 340 DLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQ 399
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
NV+P+ T+V ++ ACS L AL+ GR H + + L + +LI+MY++CG ID
Sbjct: 400 ACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRID 459
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+ QVF++M RD+ ++N++IAG +HG EA +F M NQG P VTF+ ++ ACS
Sbjct: 460 LSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACS 519
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLV G F +MT YGI P++EHY C+VDLL+R G +EAY FI +M + D +
Sbjct: 520 HSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVW 579
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
G+LL AC+IH + LG+Q+++ + +G +VLLSN ++++G++ EA ++R K
Sbjct: 580 GALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVK 639
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
G +K PGCS IE+N +H F+ GD HP IY ++ + +K GY T VL D+
Sbjct: 640 GFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLGYQADTSFVLQDL 699
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
E+ EKE AL HSE+LAI +G++S TI V KNLRVC DCH+ IK + + R IIV
Sbjct: 700 EEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIV 759
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD NRFHHF+NG CSCGD+W
Sbjct: 760 RDANRFHHFKNGQCSCGDFW 779
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 141/287 (49%), Gaps = 8/287 (2%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
D+ ST +I+ Y+ A VF+++ ++D V W AM+ G +G A+ +M
Sbjct: 132 TDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDM 191
Query: 108 Q-RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH---IVGGALINMYSR 163
Q R +RPN T+V +L +Q GAL G +H+Y + +D N ++G AL++MY++
Sbjct: 192 QDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAK 251
Query: 164 CGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVG- 222
C + A +VF M R+ T+++LI G + R EA +F++M+ +G+ T V
Sbjct: 252 CKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVAS 311
Query: 223 VLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIA 282
L C+ + +G ++ + + GI + ++ + ++ G EA + I
Sbjct: 312 ALRVCASLADLRMGTQLHALLAKS-GIHADLTAGNSLLSMYAKAGLINEATMLFDEIAI- 369
Query: 283 PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNA 328
D I G+LLS +GK + + K++ C D T V L A
Sbjct: 370 KDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPA 416
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 162/335 (48%), Gaps = 22/335 (6%)
Query: 13 GLRSNRSTRLKLVELYGKCGEFKDAMQL--------FDEMPECNDVVASTVMINCYVEHG 64
GLR N ST + L+ L + G + D+ E V+ T +++ Y +
Sbjct: 196 GLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEE--QVLIGTALLDMYAKCK 253
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV-RPNEVTIVCVL 123
+ A VF + V++ V W+A+I G V M A +LF++M + + + ++ L
Sbjct: 254 HLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASAL 313
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
C+ L L +G +H+ + K I + G +L++MY++ G I++A +F+E+ +D
Sbjct: 314 RVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTI 373
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS- 242
+Y +L++G +G++ EA +F++M ++P T V ++ ACSH + G S
Sbjct: 374 SYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSV 433
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
+ R +E I ++D+ ++ GR + + M A D + ++++ IHG
Sbjct: 434 IIRGLALETSI--CNSLIDMYAKCGRIDLSRQVFDKMP-ARDIVSWNTMIAGYGIHG--- 487
Query: 303 LGEQIAKRLLDCRS----ADSGTYVLLSNAYASSG 333
LG++ L ++ D T++ L A + SG
Sbjct: 488 LGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSG 522
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 91/189 (48%), Gaps = 1/189 (0%)
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
++ G + A +VF R+ D + A+I G A+DL+R M V PN+ T
Sbjct: 43 HIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTF 102
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
VL ACS L L GR IH++ + + V ALI++Y RC A VF +M
Sbjct: 103 PFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPM 162
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ-GIRPTKVTFVGVLNACSHGGLVDLGFE 238
RDV +N+++AG A HG A+ +M ++ G+RP T V +L + G + G
Sbjct: 163 RDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTS 222
Query: 239 IFQSMTRDY 247
+ R Y
Sbjct: 223 VHAYCLRAY 231
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 106/243 (43%), Gaps = 39/243 (16%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
GR HG V+ GL S L+++Y KCG + Q+FD+MP D+V+ MI Y
Sbjct: 425 HGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPA-RDIVSWNTMIAGY 483
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HGL + A LF M+ P++VT +
Sbjct: 484 GIHGLGK-------------------------------EATTLFLSMKNQGFEPDDVTFI 512
Query: 121 CVLSACSQLGALELGR-WIHSYMGKHRI--DLNHIVGGALINMYSRCGDIDKALQVFEEM 177
C+++ACS G + G+ W + K+ I + H + ++++ +R G +D+A Q + M
Sbjct: 513 CLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYI--CMVDLLARGGFLDEAYQFIQSM 570
Query: 178 K-ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
+ DV + +L+ +H ++I+ + MI + FV + N S G D
Sbjct: 571 PLKADVRVWGALLGACRIH-KNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEA 629
Query: 237 FEI 239
E+
Sbjct: 630 AEV 632
>gi|224088870|ref|XP_002308572.1| predicted protein [Populus trichocarpa]
gi|222854548|gb|EEE92095.1| predicted protein [Populus trichocarpa]
Length = 433
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/433 (43%), Positives = 275/433 (63%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
M+ + G V ++F + +D + W M+ V NG++ AL+ F+ M+ + P+
Sbjct: 1 MLAGFARDGQVSVVQKLFDEMPERDVISWNTMLMAYVHNGKLGEALECFKRMRESGLVPD 60
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
E T+V +LSA +QL LE G+ IHS + + + +G AL++MY++CG I+++ +FE
Sbjct: 61 EATLVTMLSASAQLCLLEHGQSIHSIIDSLSLPMTISIGTALLDMYAKCGCIEQSRLLFE 120
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
M RDV+T+N +I GLA HG +A+ +F +N+G+ P VTFVGVLNACS GLV
Sbjct: 121 NMPRRDVSTWNVMICGLASHGLGKDALTLFERFLNEGLHPMNVTFVGVLNACSRAGLVKE 180
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G FQ MT YGIEP++EHYGC+VDLL R G EA I +M I+PD ++ +L AC
Sbjct: 181 GRHYFQMMTDSYGIEPEMEHYGCMVDLLGRAGLVFEAIKVIESMAISPDPVLWAMVLCAC 240
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
+IHG +LGE+I RL++ G YV L++ YA+S KW++ V++R M E K G
Sbjct: 241 RIHGLAELGEKIGNRLIELDPTYDGHYVQLASIYANSRKWEDVVRVRRLMAERNTSKVAG 300
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
S IE ++H F+ G H Q +I K ++ ++ + GY P+ VLHDI + EKE
Sbjct: 301 WSLIEARGKVHRFVAGHREHEQSLEIQKMLEIIETRLAAAGYVPNVSPVLHDIGEEEKEN 360
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
A+ +HSERLAI +GL+ T P + IR+VKNLRVC DCH + K+I+ + +R+IIVRD +RFH
Sbjct: 361 AIKVHSERLAIAFGLLVTGPGSCIRIVKNLRVCWDCHEVTKMISRVFEREIIVRDGSRFH 420
Query: 476 HFENGTCSCGDYW 488
HF+ G CSC DYW
Sbjct: 421 HFKEGKCSCLDYW 433
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 81/197 (41%), Gaps = 34/197 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ IH + L L S L+++Y KCG + + LF+ MP DV VMI
Sbjct: 80 GQSIHSIIDSLSLPMTISIGTALLDMYAKCGCIEQSRLLFENMPR-RDVSTWNVMICGLA 138
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HGL ++ AL LF + + P VT V
Sbjct: 139 SHGLGKD-------------------------------ALTLFERFLNEGLHPMNVTFVG 167
Query: 122 VLSACSQLGALELGR-WIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VL+ACS+ G ++ GR + + I+ G ++++ R G + +A++V E M
Sbjct: 168 VLNACSRAGLVKEGRHYFQMMTDSYGIEPEMEHYGCMVDLLGRAGLVFEAIKVIESMAIS 227
Query: 180 RDVTTYNSLIAGLAMHG 196
D + ++ +HG
Sbjct: 228 PDPVLWAMVLCACRIHG 244
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/487 (40%), Positives = 283/487 (58%), Gaps = 33/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR IH ++LGL N S L+ +Y KC E
Sbjct: 356 GRFIHKLSVELGLDRNVSVVNSLISMYCKCKE---------------------------- 387
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
V+ A +F +++ + V W AMI G +NG AL+ F +M+ V+P+ T V
Sbjct: 388 ----VDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVS 443
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V++A ++L +WIH + + +D N V AL++MY++CG I A +F+ M ER
Sbjct: 444 VITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERH 503
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
VTT+N++I G HG A+E+F EM I+P VTF+ V++ACSH GLV+ G + F
Sbjct: 504 VTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFY 563
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M +Y IE ++HYG +VDLL R GR EA+DFI M + P + G++L AC+IH +
Sbjct: 564 MMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNV 623
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
E+ A+RL + D G +VLL+N Y ++ W++ Q+R M G++K PGCS +E+
Sbjct: 624 NFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEI 683
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
NE+H F G HP ++IY +++L +K GY P T +VL +E+ KE L+ HS
Sbjct: 684 KNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHS 742
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GL++T TTI V KNLRVC DCH+ K I+ +T R+I+VRD RFHHF+NG
Sbjct: 743 EKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGA 802
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 803 CSCGDYW 809
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 156/336 (46%), Gaps = 65/336 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIHG ++ G S + LV++Y KCG + A QLFD M E N
Sbjct: 255 GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERN------------- 301
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
V W +MID V+N A+ +F++M + V+P +V+++
Sbjct: 302 -------------------VVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMG 342
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
L AC+ LG LE GR+IH + +D N V +LI+MY +C ++D A +F +++ R
Sbjct: 343 ALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRT 402
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HG 230
+ ++N++I G A +GR I+A+ F +M ++ ++P T+V V+ A + HG
Sbjct: 403 LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHG 462
Query: 231 ---------------GLVDL----GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEE 271
LVD+ G + + D E + + ++D G +
Sbjct: 463 VVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKA 522
Query: 272 AYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLG 304
A + M+ I P+ + S++SAC G ++ G
Sbjct: 523 ALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAG 558
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 168/351 (47%), Gaps = 46/351 (13%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIHG ++K G + L +Y KC + +A ++FD MPE
Sbjct: 154 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPE--------------- 198
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+D V W ++ G +NG AL++ + M +N++P+ +TIV
Sbjct: 199 -----------------RDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVS 241
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL A S L + +G+ IH Y + D + AL++MY++CG ++ A Q+F+ M ER+
Sbjct: 242 VLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERN 301
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++NS+I + EA+ +F++M+++G++PT V+ +G L+AC+ G ++ G
Sbjct: 302 VVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG-RFIH 360
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK----IAPDHIMLGSLLSACKI 297
++ + G++ + ++ + + + A ++ ++ + ++LG + I
Sbjct: 361 KLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPI 420
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYAS-----SGKWKEAVQIRA 343
L Q+ R + D+ TYV + A A KW V +R+
Sbjct: 421 DA-LNYFSQMRSRTV---KPDTFTYVSVITAIAELSITHHAKWIHGVVMRS 467
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 115/226 (50%), Gaps = 1/226 (0%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
T +++ + +G V+ A VF + K V + M+ G + ++ +AL F M+ D+V
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
P +L C L +G+ IH + K L+ L NMY++C +++A +V
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV 233
F+ M ERD+ ++N+++AG + +G + A+EM + M + ++P+ +T V VL A S L+
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLI 252
Query: 234 DLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM 279
+G EI R G + + +VD+ ++ G E A M
Sbjct: 253 SVGKEIHGYAMRS-GFDSLVNISTALVDMYAKCGSLETARQLFDGM 297
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 107/279 (38%), Gaps = 41/279 (14%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L CS L L R I + K+ + H L++++ R G +D+A +VFE + +
Sbjct: 43 LLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HG 230
Y++++ G A +A++ F M + P F +L C HG
Sbjct: 100 NVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 231 GLVDLGFEI-FQSMT------------------RDYGIEPQIEHYGCIVDLLSRVGRPEE 271
LV GF + +MT D E + + IV S+ G
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219
Query: 272 AYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSA-DS--GTYVLL 325
A + + +M + P I + S+L A + +G++I + RS DS L
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAM--RSGFDSLVNISTAL 277
Query: 326 SNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNE 364
+ YA G + A Q+ M E V V NE
Sbjct: 278 VDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNE 316
>gi|357477567|ref|XP_003609069.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510124|gb|AES91266.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 611
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/498 (40%), Positives = 296/498 (59%), Gaps = 27/498 (5%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G ++H + G + L+ +Y +CG ++ A ++FDEM + N V + V+ C+
Sbjct: 131 QGIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWNAVVTACF 190
Query: 61 ---------VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN 111
V G E VF +K++D W+ MI G ++G A F+E+ RD
Sbjct: 191 RCGMWRVLGVSFGWRE---VVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRDR 247
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
RP+EV++ VLSAC+Q GA E G+ +H +M K V ALI+ YS+CG++D A
Sbjct: 248 NRPSEVSLTGVLSACAQAGAFEFGKILHGFMEKAGFLCIVSVNNALIDTYSKCGNVDMAK 307
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
VF LAMHGR+ EA+ +F EM G+RP VTF+ +L ACSH G
Sbjct: 308 LVFN--------------ISLAMHGRADEAIRVFHEMEESGVRPDGVTFISLLYACSHSG 353
Query: 232 LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSL 291
LV+ G +F M YGIEP IEHYGC+VDL R R ++AY+FI M I P+ I+ +L
Sbjct: 354 LVEQGCALFSKMRNFYGIEPAIEHYGCMVDLYGRAARLQKAYEFIRQMPILPNVIIWRTL 413
Query: 292 LSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
L AC IHG ++L E + RL + +SG +VLLSN YA +GKWK+ IR M E ++
Sbjct: 414 LGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVAGIRRTMIEQSMK 473
Query: 352 KEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELK-QIVKLEGYSPSTEVVLHDIED 410
K PG S IE++ + F+ G+ + ++ + K++E+ ++ + EGY+P VLHD+E+
Sbjct: 474 KIPGWSMIEIDKVNYGFVAGEKPNEVTKEAHDKLREIMLRLREEEGYAPQVRSVLHDVEE 533
Query: 411 WEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRD 470
EKE +++ HSE+LA +G+ +R+VKNLRVC DCH+++KLI+ + + +IIVRD
Sbjct: 534 EEKEDSMSKHSEKLAAAFGIAKLPKGRILRIVKNLRVCGDCHTVMKLISKVYQVEIIVRD 593
Query: 471 RNRFHHFENGTCSCGDYW 488
R+RFH F+ G CSC DYW
Sbjct: 594 RSRFHSFKGGFCSCRDYW 611
>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 641
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/442 (42%), Positives = 266/442 (60%), Gaps = 1/442 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
D V + + + Y + G V++A VF R+ V+D V WTAM++ G LF M
Sbjct: 200 GDAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHM 259
Query: 108 QRD-NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
R VRPNE T VL AC+Q GR +H M K + AL+ MYS+CGD
Sbjct: 260 LRTRGVRPNEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGD 319
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+ A++VFE M + D+ ++ ++I+G A +G+ EA+ F + GI+P VTFVGVL+A
Sbjct: 320 MGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSA 379
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
C+H GLVD G EIF S+ Y IE +HY C++DLLSR G+ E A I NM + P+
Sbjct: 380 CAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKF 439
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
+ SLL C+IH + L + A+ L + + TYV L+N YAS G + E +R M+
Sbjct: 440 LWASLLGGCRIHKNVGLARRAAEALFEIEPENPATYVTLANIYASVGLFDEVEDVRRIME 499
Query: 347 EAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH 406
G+ K P S IEV +H F++GD HP+ ++IY +++L + EGY E VLH
Sbjct: 500 SKGITKMPASSWIEVGRRVHVFLVGDKSHPKADEIYALLKKLYVKMVEEGYVADIEFVLH 559
Query: 407 DIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKI 466
D+ED +KE + HSERLA+ +G+I+T + I+V KNLR+C DCH+ IKLI+ I +R I
Sbjct: 560 DVEDEQKEQDIGYHSERLAVAFGIIATPEGSPIKVFKNLRICGDCHAAIKLISQIVQRDI 619
Query: 467 IVRDRNRFHHFENGTCSCGDYW 488
IVRD NRFHHF++G CSC DYW
Sbjct: 620 IVRDSNRFHHFKDGICSCRDYW 641
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 187/418 (44%), Gaps = 58/418 (13%)
Query: 34 FKDAMQLFDEMPECNDVVASTVMINCYVEHGL-VENAFEVFSRVKVKDTVCWTAMIDGLV 92
DA+ LF + D+ + +I+ + +A E+F R+ +D W+A++ G
Sbjct: 79 LPDALALFSSI-AAPDICSHNTLISALSRSPRHLPSARELFDRMPQRDHFAWSALVSGYT 137
Query: 93 RNGEMARALDLFREMQR---DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDL 149
R+G+ AL L+R MQ ++ NE T L+A + GR +H ++ + ID
Sbjct: 138 RHGQPEAALALYRRMQEEPGNDGADNEFTASSALAAAAAARCGRAGRELHCHVVRRGIDA 197
Query: 150 ---NHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
+ ++ AL +MY++CG +D A +VF+ M RD ++ +++ GR E +F
Sbjct: 198 AGGDAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFL 257
Query: 207 EMI-NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR-------------------- 245
M+ +G+RP + T+ GVL AC+ + G ++ M +
Sbjct: 258 HMLRTRGVRPNEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKC 317
Query: 246 -DYG---------IEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLL 292
D G +P + + ++ ++ G+PEEA +D I PDH+ +L
Sbjct: 318 GDMGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVL 377
Query: 293 SACKIHGKLQLGEQIAKRLLD--CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
SAC G + G +I + + C + Y + + + SG+++ A
Sbjct: 378 SACAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERA------------ 425
Query: 351 QKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
+K G +++ N + +LG R + + ++ E + ++E +P+T V L +I
Sbjct: 426 EKMIGNMAVKPNKFLWASLLGGCRIHKNVGLARRAAE--ALFEIEPENPATYVTLANI 481
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 43/239 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++HG++ K G + L+ +Y KCG+ A+++F+ M + D+V+ T +I+ Y
Sbjct: 288 GRQVHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAMAK-PDLVSWTAVISGYA 346
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++G E A F D+F R ++P+ VT V
Sbjct: 347 QNGQPEEALRYF----------------------------DMF---LRSGIKPDHVTFVG 375
Query: 122 VLSACSQLGALELGRWI-HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSAC+ G ++ G I HS ++ I+ +I++ SR G ++A ++ M +
Sbjct: 376 VLSACAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVK 435
Query: 181 -DVTTYNSLIAGLAMH---GRSIEAVEMFREMINQGIRP-TKVTFVGVLNACSHGGLVD 234
+ + SL+ G +H G + A E E I P T+V + N + GL D
Sbjct: 436 PNKFLWASLLGGCRIHKNVGLARRAAEALFE-----IEPENPATYVTLANIYASVGLFD 489
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/556 (37%), Positives = 296/556 (53%), Gaps = 69/556 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGE---------------------------- 33
G +IH QV+K G + N L+++Y K GE
Sbjct: 434 GEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQ 493
Query: 34 ---FKDAMQLFDEMPE--------------------------------------CNDVVA 52
F +A++LF EM D+
Sbjct: 494 HDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSI 553
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
+++ Y G ++A+ F ++ KD + W A+I G ++G AL +F +M + V
Sbjct: 554 GNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGV 613
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
N T +SA + ++ G+ IH+ M K D LI +YS+CG I+ A +
Sbjct: 614 EANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKR 673
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
F EM E++V ++N++I G + HG EAV +F EM G+ P VTFVGVL+ACSH GL
Sbjct: 674 EFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGL 733
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
V+ G F+SM++++G+ P+ EHY C+VDLL R A +FI M I PD ++ +LL
Sbjct: 734 VNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLL 793
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
SAC +H +++GE A+ LL+ DS TYVLLSN YA SGKW + R MK+ GV+K
Sbjct: 794 SACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKK 853
Query: 353 EPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE 412
EPG S IEV N IH F +GD HP EQIY+ + +L + GY +L+D+E +
Sbjct: 854 EPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNERAGEIGYVQDRYNLLNDVEQEQ 913
Query: 413 KEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRN 472
K+ IHSE+LA+ +GL+S IRV+KNLRVCNDCH+ IK ++ I+ R I+VRD
Sbjct: 914 KDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVCNDCHNWIKFVSKISNRAIVVRDAY 973
Query: 473 RFHHFENGTCSCGDYW 488
RFHHFE G CSC DYW
Sbjct: 974 RFHHFEGGVCSCKDYW 989
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 177/364 (48%), Gaps = 43/364 (11%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+++H V+K+G+ S+ L++LY KC FD
Sbjct: 332 KGKQLHSYVIKMGMSSDLIIEGSLLDLYVKC---------FD------------------ 364
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+E A E F + ++ V W M+ + G ++ + +F +MQ + + PN+ T
Sbjct: 365 -----IETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYP 419
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L C+ LGAL+LG IH+ + K N V LI+MY++ G++D A + + ++E
Sbjct: 420 SILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREE 479
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++ ++IAG H EA+++F+EM NQGIR + F ++AC+ ++ G +I
Sbjct: 480 DVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIH 539
Query: 241 -QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
QS Y + I + +V L +R GR ++AY + A D+I +L+S G
Sbjct: 540 AQSYISGYSEDLSIGN--ALVSLYARCGRAQDAYLAFEKID-AKDNISWNALISGFAQSG 596
Query: 300 ----KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
LQ+ Q+ + ++ G+ V +A A++ K+ QI A M + G E
Sbjct: 597 HCEEALQVFSQMNQAGVEANLFTFGSAV---SATANTANIKQGKQIHAMMIKTGYDSETE 653
Query: 356 CSSI 359
S++
Sbjct: 654 ASNV 657
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 161/330 (48%), Gaps = 36/330 (10%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+I+ Y ++G V+ A VF R+ +KD+V W AMI GL +NG A+ LF +M + V P
Sbjct: 153 LIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPT 212
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
VLSAC+++ +LG +H ++ K + V AL+ +YSR G++ A Q+F
Sbjct: 213 PYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFS 272
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS------- 228
+M RD +YNSLI+GLA G S A+++F +M ++P VT +L+AC+
Sbjct: 273 KMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYK 332
Query: 229 -------------------HGGLVDLGFEIFQSMT-RDYGIEPQIEH---YGCIVDLLSR 265
G L+DL + F T +Y + + E+ + ++ +
Sbjct: 333 GKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQ 392
Query: 266 VGRPEEAYDFITNMKI---APDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTY 322
+G E+Y M+I P+ S+L C G L LGEQI +++ Y
Sbjct: 393 LGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIK-SGFQFNVY 451
Query: 323 V--LLSNAYASSGKWKEAVQIRAKMKEAGV 350
V +L + YA G+ A I +++E V
Sbjct: 452 VCSVLIDMYAKHGELDTARGILQRLREEDV 481
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 167/350 (47%), Gaps = 15/350 (4%)
Query: 13 GLRSNRSTRLKLVELYGKCGEFKDAMQL----FDEMPECNDVVASTVMINCYVEHGLVEN 68
G+R+N T L L E G DA +L F + DV+ S +I+ Y+ HG V+N
Sbjct: 5 GIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSR-LIDIYLAHGEVDN 63
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A ++F + + W +I GL+ ++ L LF M +NV P+E T VL ACS
Sbjct: 64 AIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSG 123
Query: 129 LGA-LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNS 187
A ++ IH+ + H + +V LI++YS+ G +D A VFE + +D ++ +
Sbjct: 124 GKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVA 183
Query: 188 LIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDY 247
+I+GL+ +GR EA+ +F +M + PT F VL+AC+ L LG E +
Sbjct: 184 MISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLG-EQLHGFIVKW 242
Query: 248 GIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG----KLQL 303
G+ + +V L SR G A + M D I SL+S G LQL
Sbjct: 243 GLSSETFVCNALVTLYSRWGNLIAAEQIFSKMH-RRDRISYNSLISGLAQRGFSDRALQL 301
Query: 304 GEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
E++ LDC D T L +A AS G + Q+ + + + G+ +
Sbjct: 302 FEKMQ---LDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSD 348
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 179/416 (43%), Gaps = 99/416 (23%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++HG ++K GL S LV LY + G A Q
Sbjct: 232 GEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQ---------------------- 269
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+FS++ +D + + ++I GL + G RAL LF +MQ D ++P+ VT+
Sbjct: 270 ----------IFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVAS 319
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+LSAC+ +GA G+ +HSY+ K + + I+ G+L+++Y +C DI+ A + F + +
Sbjct: 320 LLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETEN 379
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +N ++ G E+ +F +M +G+ P + T+ +L C+ G +DLG +I
Sbjct: 380 VVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHT 439
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA----------------------------- 272
+ + G + + ++D+ ++ G + A
Sbjct: 440 QVIKS-GFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFA 498
Query: 273 -----YDFITNMKIAPDHIMLGSLLSAC----------KIHGK---------LQLGEQIA 308
+ + N I D+I S +SAC +IH + L +G +
Sbjct: 499 EALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALV 558
Query: 309 KRLLDCRSA-------------DSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
C A D+ ++ L + +A SG +EA+Q+ ++M +AGV+
Sbjct: 559 SLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVE 614
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 120/280 (42%), Gaps = 47/280 (16%)
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M+ +R N T + + C G+L + +H+ + K D ++G LI++Y G+
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+D A+++F+++ +V+ +N +I+GL + + + +F MI + + P + TF VL A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 227 CSHG------------------------------------GLVDLGFEIFQSMTRDYGIE 250
CS G G VDL +F+ + +
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180
Query: 251 PQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQI 307
+ ++ LS+ GR +EA M + P + S+LSAC +LGEQ+
Sbjct: 181 -----WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQL 235
Query: 308 AKRLLDCRSADSGTYV--LLSNAYASSGKWKEAVQIRAKM 345
++ S T+V L Y+ G A QI +KM
Sbjct: 236 HGFIVKW-GLSSETFVCNALVTLYSRWGNLIAAEQIFSKM 274
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 10/211 (4%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPEC---NDVVASTVMI 57
E ++ Q+ + G+ +N T V K Q+ M + ++ AS V+I
Sbjct: 600 EALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLI 659
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
Y + G +E+A F + K+ V W AMI G ++G + A+ LF EM++ + PN V
Sbjct: 660 TLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHV 719
Query: 118 TIVCVLSACSQLGALELG-RWIHSYMGKHRI--DLNHIVGGALINMYSRCGDIDKALQVF 174
T V VLSACS +G + G + S +H + H V ++++ R + A +
Sbjct: 720 TFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYV--CVVDLLGRAALLCCAREFI 777
Query: 175 EEMK-ERDVTTYNSLIAGLAMHGRSIEAVEM 204
EEM E D + +L++ +H ++IE E
Sbjct: 778 EEMPIEPDAMIWRTLLSACTVH-KNIEIGEF 807
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/486 (39%), Positives = 286/486 (58%), Gaps = 32/486 (6%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
R++HG +K G S+ L++ YGKC
Sbjct: 453 RQVHGLSVKSGFHSDIYVVNSLIDSYGKCSH----------------------------- 483
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
VE+A +F + D V +T+MI + G+ AL LF EMQ ++P+ +
Sbjct: 484 ---VEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSL 540
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L+AC+ L A E G+ +H ++ K+ L+ G +L+NMY++CG ID A + F E+ ER +
Sbjct: 541 LNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGI 600
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
+++++I GLA HG +A+++F +M+ +G+ P +T V VL AC+H GLV F+S
Sbjct: 601 VSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFES 660
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
M +G +P EHY C++DLL R G+ EA + + M + + G+LL A +IH ++
Sbjct: 661 MEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVE 720
Query: 303 LGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVN 362
LG + A+ L SGT+VLL+N YAS+GKW+ ++R M+++ V+KEPG S IEV
Sbjct: 721 LGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVK 780
Query: 363 NEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSE 422
++++ F++GD H + ++IY K+ EL ++ GY P E+ LHD+E EKE L HSE
Sbjct: 781 DKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSE 840
Query: 423 RLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTC 482
+LA+ +GLI+T IRV KNLRVC DCH+ K I I R+IIVRD NRFHHF++G+C
Sbjct: 841 KLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSC 900
Query: 483 SCGDYW 488
SCGDYW
Sbjct: 901 SCGDYW 906
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 138/308 (44%), Gaps = 56/308 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +IH + K GL + S R L+ LY KC F A +L DE E
Sbjct: 75 GLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSE--------------- 119
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
D V W+A+I G +NG AL F EM V+ NE T
Sbjct: 120 -----------------PDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSS 162
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL ACS + L +G+ +H + + + V L+ MY++C + + ++F+E+ ER+
Sbjct: 163 VLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERN 222
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HG 230
V ++N+L + EAV +F EM+ GI+P + + ++NAC+ HG
Sbjct: 223 VVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHG 282
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGS 290
L+ LG Y +P + +VD+ ++VG +A +K PD + +
Sbjct: 283 YLIKLG----------YDWDPFSAN--ALVDMYAKVGDLADAISVFEKIK-QPDIVSWNA 329
Query: 291 LLSACKIH 298
+++ C +H
Sbjct: 330 VIAGCVLH 337
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 114/501 (22%), Positives = 210/501 (41%), Gaps = 93/501 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN------------- 48
G+ IHG ++KLG + + LV++Y K G+ DA+ +F+++ + +
Sbjct: 277 GKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVL 336
Query: 49 -----------------------------DVVASTVMINCYVEHGLVENAFEVFSRVKVK 79
D+ S +++ Y + L+E+A F+ + K
Sbjct: 337 HEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEK 396
Query: 80 DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIH 139
D + W A+I G + E AL LF EM ++ + N+ T+ +L + + L + + R +H
Sbjct: 397 DLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVH 456
Query: 140 SYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSI 199
K + V +LI+ Y +C ++ A ++FEE D+ ++ S+I A +G+
Sbjct: 457 GLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGE 516
Query: 200 EAVEMFREMINQGIRPTKVTFVGVLNACS-----------HGGLVDLGF--EIF--QSMT 244
EA+++F EM + ++P + +LNAC+ H ++ GF +IF S+
Sbjct: 517 EALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLV 576
Query: 245 RDYG---------------IEPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHI 286
Y E I + ++ L++ G +A M ++P+HI
Sbjct: 577 NMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHI 636
Query: 287 MLGSLLSACKIHG---KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRA 343
L S+L AC G + +L + + L + Y + + +GK EAV++
Sbjct: 637 TLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQE-HYACMIDLLGRAGKINEAVELVN 695
Query: 344 KMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEV 403
KM E N + +LG R + ++ ++ E+ I LE T V
Sbjct: 696 KM------------PFEANASVWGALLGAARIHKDVELGRRAAEMLFI--LEPEKSGTHV 741
Query: 404 VLHDIEDWEKEWALAIHSERL 424
+L +I +W RL
Sbjct: 742 LLANIYASAGKWENVAEVRRL 762
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 32/210 (15%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++HG V+ G + LV +Y KC EF D+ +LFDE+PE
Sbjct: 176 GKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPE--------------- 220
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ V W A+ V+ A+ LF EM ++PNE ++
Sbjct: 221 -----------------RNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSS 263
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+++AC+ L G+ IH Y+ K D + AL++MY++ GD+ A+ VFE++K+ D
Sbjct: 264 MVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPD 323
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQ 211
+ ++N++IAG +H +A+E+ +M Q
Sbjct: 324 IVSWNAVIAGCVLHEHHEQALELLGQMKRQ 353
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 11/163 (6%)
Query: 87 MIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHR 146
+I + + E + + + + N P V+ +LS C +L G IH+++ K
Sbjct: 27 LIQTVPQFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86
Query: 147 IDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
+ + + LIN+YS+C A ++ +E E D+ ++++LI+G A +G A+ F
Sbjct: 87 LSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFH 146
Query: 207 EMINQGIRPTKVTFVGVLNACS-----------HGGLVDLGFE 238
EM G++ + TF VL ACS HG +V GFE
Sbjct: 147 EMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFE 189
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 40/200 (20%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+++H +LK G + LV +Y KCG DA + F E+ E +V+ + MI
Sbjct: 552 QGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTE-RGIVSWSAMIG-- 608
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
GL ++G +AL LF +M ++ V PN +T+V
Sbjct: 609 -----------------------------GLAQHGHGRQALQLFNQMLKEGVSPNHITLV 639
Query: 121 CVLSACSQLGALELGRWIHSYM----GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
VL AC+ G + + M G + ++ +I++ R G I++A+++ +
Sbjct: 640 SVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHY---ACMIDLLGRAGKINEAVELVNK 696
Query: 177 MK-ERDVTTYNSLIAGLAMH 195
M E + + + +L+ +H
Sbjct: 697 MPFEANASVWGALLGAARIH 716
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/487 (40%), Positives = 293/487 (60%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G++IH VLK GL SN ++++Y KCGE
Sbjct: 357 GKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGE---------------------------- 388
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+EN+ ++F + ++ V W +I G V+ G+ RA++LF M +++P EVT
Sbjct: 389 ----IENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSS 444
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL A + L ALE G IHS K + + +V +LI+MY++CG I+ A F++M +RD
Sbjct: 445 VLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRD 504
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
++N++I G +MHG S+EA+ +F M + +P K+TFVGVL+ACS+ GL+ G F+
Sbjct: 505 EVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFE 564
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM++DY I+P IEHY C+V LL R+GR +EA I + P ++ +LL AC IH K+
Sbjct: 565 SMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKV 624
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
LG A+ +L+ D T+VLLSN YA++G+W +R M++ V+KEPG S +E
Sbjct: 625 DLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVEN 684
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+H F +GD HP + I ++ L + + GY P VL D++D EKE L +HS
Sbjct: 685 QGVVHYFSVGDTSHPDIKLICAMLEWLNKKTRDAGYVPDCNAVLLDVQDDEKERHLWVHS 744
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ERLA+ YGLI T +IR++KNLR+C DCH+++KLI+ + +R+I++RD NRFHHF +G
Sbjct: 745 ERLALAYGLIRTPLSCSIRIIKNLRICIDCHTVMKLISKVVQREIVIRDINRFHHFRHGV 804
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 805 CSCGDYW 811
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 141/298 (47%), Gaps = 34/298 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +HG LK + + L+ELY K GE DA +L
Sbjct: 256 GKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRL--------------------- 294
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
F + D + W+ MI ++ ALDLF M++ +V PN T
Sbjct: 295 -----------FEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFAS 343
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL AC+ +L+LG+ IHS + K ++ N V A++++Y++CG+I+ ++++FEE+ +R+
Sbjct: 344 VLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRN 403
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
T+N++I G G A+ +F M+ ++PT+VT+ VL A + ++ G +I
Sbjct: 404 DVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQI-H 462
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
S+T ++D+ ++ GR +A M D + +++ +HG
Sbjct: 463 SLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMN-KRDEVSWNAMICGYSMHG 519
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 112/224 (50%), Gaps = 1/224 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D T +I+ Y G V+ A VF + KD V WT M+ N +L LF +M+
Sbjct: 170 DAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMR 229
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+PN TI L +C L A +G+ +H K D + VG AL+ +Y++ G+I
Sbjct: 230 IMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEII 289
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A ++FEEM + D+ ++ +IA A RS EA+++F M + P TF VL AC+
Sbjct: 290 DAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACA 349
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
+DLG +I S +G+ + I+D+ ++ G E +
Sbjct: 350 SSVSLDLGKQI-HSCVLKFGLNSNVFVSNAIMDVYAKCGEIENS 392
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 148/343 (43%), Gaps = 54/343 (15%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D+ A +++N YV+ +++A ++F + +T+ + + G R+ + +AL +
Sbjct: 69 DLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIF 128
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
++ N +L + L +H+ + K + VG ALI+ YS G++D
Sbjct: 129 KEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVD 188
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A VF+++ +D+ ++ ++A A + E++++F +M G +P T G L +C
Sbjct: 189 VARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSC- 247
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQ-------------IEHY---GCIVD----------- 261
LG E F +G + +E Y G I+D
Sbjct: 248 ------LGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKT 301
Query: 262 -------LLSRVG---RPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIA 308
+++R R +EA D M+ + P++ S+L AC L LG+QI
Sbjct: 302 DLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIH 361
Query: 309 KRLLDCRSADSGTYVLLSNA----YASSGKWKEAVQIRAKMKE 347
+L + V +SNA YA G+ + ++++ ++ +
Sbjct: 362 SCVL---KFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPD 401
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/494 (38%), Positives = 297/494 (60%), Gaps = 8/494 (1%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKD------AMQLFDEMPECNDVVAST 54
E E LK+ TR+ ++ + C D +L D++ ++V
Sbjct: 327 ESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMN 386
Query: 55 VMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP 114
+I+ Y + V+ A +F+ ++ K V W AMI G +NG + AL+LF MQ ++
Sbjct: 387 SLISMYSKCKRVDIAASIFNNLE-KTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKL 445
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
+ T+V V++A + +WIH + +D N V AL++MY++CG I A ++F
Sbjct: 446 DCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLF 505
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
+ M+ER V T+N++I G HG E +++F EM ++P +TF+ V++ACSH G V+
Sbjct: 506 DMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVE 565
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
G +F+SM DY +EP ++HY +VDLL R G+ ++A++FI M I P +LG++L A
Sbjct: 566 EGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGA 625
Query: 295 CKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
CKIH ++LGE+ A++L + G +VLL+N YAS+ W + ++R M++ G+ K P
Sbjct: 626 CKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTP 685
Query: 355 GCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKE 414
GCS +E+ NEIH F G HP+ ++IY ++ L +K GY P + + HD+E+ K+
Sbjct: 686 GCSWVELRNEIHTFYSGSTNHPESKKIYAFLETLGDEIKAAGYVPDPDSI-HDVEEDVKK 744
Query: 415 WALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRF 474
L+ HSERLAI +GL++T P TT+ + KNLRVC DCH K I+ +T R+IIVRD RF
Sbjct: 745 QLLSSHSERLAIAFGLLNTSPGTTLHIRKNLRVCGDCHDTTKYISLVTGREIIVRDLRRF 804
Query: 475 HHFENGTCSCGDYW 488
HHF+NG+CSCGDYW
Sbjct: 805 HHFKNGSCSCGDYW 818
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 170/350 (48%), Gaps = 39/350 (11%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GREIHG ++ G SN ++ LY KC +
Sbjct: 163 KGREIHGLIITNGFESNLFVMTAVMSLYAKCRQ--------------------------- 195
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++NA+++F R++ KD V WT ++ G +NG RAL L +MQ +P+ VT+V
Sbjct: 196 -----IDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLV 250
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L A + + AL +GR IH Y + + V AL++MY +CG A VF+ M+ +
Sbjct: 251 SILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSK 310
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
V ++N++I G A +G S EA F +M+++G PT+VT +GVL AC++ G ++ G+ +
Sbjct: 311 TVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVH 370
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKI 297
+ + + ++ + ++ + S+ R + A N++ + + ++LG + C +
Sbjct: 371 KLLDK-LKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNVTWNAMILGYAQNGC-V 428
Query: 298 HGKLQLGEQIAKR--LLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
L L + + LDC + L + KW + +RA M
Sbjct: 429 KEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACM 478
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 148/343 (43%), Gaps = 66/343 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR IHG + G S + L+++Y KCG + A +F M VV+ MI
Sbjct: 265 GRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGM-RSKTVVSWNTMI---- 319
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
DG +NGE A F +M + P VT++
Sbjct: 320 ---------------------------DGCAQNGESEEAFATFLKMLDEGEVPTRVTMMG 352
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL AC+ LG LE G ++H + K ++D N V +LI+MYS+C +D A +F +++ +
Sbjct: 353 VLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTN 412
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HG 230
V T+N++I G A +G EA+ +F M +QGI+ T VGV+ A + HG
Sbjct: 413 V-TWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHG 471
Query: 231 ---------------GLVDLGFEIFQSMTR----DYGIEPQIEHYGCIVDLLSRVGRPEE 271
LVD+ + T D E + + ++D G +E
Sbjct: 472 LAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKE 531
Query: 272 AYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
D M+ + P+ I S++SAC G ++ G + K +
Sbjct: 532 TLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSM 574
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 144/314 (45%), Gaps = 38/314 (12%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
N+ + T +I+ + + G A VF V++K V + M+ G +N + AL F M
Sbjct: 77 NEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRM 136
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
D VR C+L C + L+ GR IH + + + N V A++++Y++C I
Sbjct: 137 MCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQI 196
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
D A ++FE M+ +D+ ++ +L+AG A +G + A+++ +M G +P VT V +L A
Sbjct: 197 DNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAV 256
Query: 228 S-----------HGGLVDLGFEIFQSMTRDY------------------GIEPQ-IEHYG 257
+ HG GFE ++T G+ + + +
Sbjct: 257 ADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWN 316
Query: 258 CIVDLLSRVGRPEEAYDFITNMKI-----APDHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
++D ++ G EEA F T +K+ P + + +L AC G L+ G + K LL
Sbjct: 317 TMIDGCAQNGESEEA--FATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHK-LL 373
Query: 313 DCRSADSGTYVLLS 326
D DS V+ S
Sbjct: 374 DKLKLDSNVSVMNS 387
>gi|218185168|gb|EEC67595.1| hypothetical protein OsI_34962 [Oryza sativa Indica Group]
Length = 838
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/481 (38%), Positives = 290/481 (60%), Gaps = 23/481 (4%)
Query: 8 QVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVE 67
Q+L +R L++++ +CG ++FD + D+ A +++ Y
Sbjct: 381 QILNNETSCDRVLGAALLDVFARCGRIASCRKVFDRIAN-PDLPAWNALLSAY------- 432
Query: 68 NAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACS 127
+R++ +D C ++ D + L++F M ++PNE+T+V V+ AC
Sbjct: 433 ------ARLRARDVACASSAADAI---------LEMFVRMLSLAIKPNEITLVAVIGACG 477
Query: 128 QLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNS 187
+LGA+ G W H+Y K R+ +N IV AL+ MY+ CG +D A QVF +RD YN+
Sbjct: 478 ELGAVSHGVWAHTYAVKRRLAVNCIVATALVEMYAGCGRLDLAEQVFAAASDRDTRCYNA 537
Query: 188 LIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDY 247
++ GLA+HG A+ +F M +G+ VT + V+ AC+H GLVD G + F M ++
Sbjct: 538 MLHGLAVHGHGRAALSLFDRMHGEGVPVDGVTVLSVMCACAHAGLVDEGLDYFDRMEIEF 597
Query: 248 GIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQI 307
GIEP IEHYGC+VD+LSR GR +A I M I P+ + SL+ AC IHGKL+LG+++
Sbjct: 598 GIEPSIEHYGCMVDMLSRAGRLNDAEKLIHGMPIVPNAAIYRSLIRACGIHGKLELGKKM 657
Query: 308 AKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHE 367
L+ DSG +VL+SN YA++ +W +A + R +MK G+ K PG S +++N +HE
Sbjct: 658 IAELMRLEPDDSGNHVLISNFYATTNRWDDAKKARKEMKSMGIDKSPGSSFVDINGVLHE 717
Query: 368 FILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAIC 427
F++GD HP ++IY +++++ + G+ ST L D+E+ +K AL+ HSERLAI
Sbjct: 718 FLVGDKTHPASKEIYAMVEDIETRLSECGHRSSTSSALFDVEEEDKADALSYHSERLAIA 777
Query: 428 YGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDY 487
+ LI++ P IR++KNLRVC DCH KL++ + R+I++RDR RFHHF +G CSCGD+
Sbjct: 778 FALIASNPGAPIRIIKNLRVCADCHESAKLVSRVYGREIVMRDRTRFHHFRDGVCSCGDF 837
Query: 488 W 488
W
Sbjct: 838 W 838
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/486 (39%), Positives = 286/486 (58%), Gaps = 32/486 (6%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
R++HG +K G S+ L++ YGKC
Sbjct: 480 RQVHGLSVKSGFHSDIYVVNSLIDSYGKCSH----------------------------- 510
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
VE+A +F + D V +T+MI + G+ AL LF EMQ ++P+ +
Sbjct: 511 ---VEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSL 567
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L+AC+ L A E G+ +H ++ K+ L+ G +L+NMY++CG ID A + F E+ ER +
Sbjct: 568 LNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGI 627
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
+++++I GLA HG +A+++F +M+ +G+ P +T V VL AC+H GLV F+S
Sbjct: 628 VSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFES 687
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
M +G +P EHY C++DLL R G+ EA + + M + + G+LL A +IH ++
Sbjct: 688 MEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVE 747
Query: 303 LGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVN 362
LG + A+ L SGT+VLL+N YAS+GKW+ ++R M+++ V+KEPG S IEV
Sbjct: 748 LGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVK 807
Query: 363 NEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSE 422
++++ F++GD H + ++IY K+ EL ++ GY P E+ LHD+E EKE L HSE
Sbjct: 808 DKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSE 867
Query: 423 RLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTC 482
+LA+ +GLI+T IRV KNLRVC DCH+ K I I R+IIVRD NRFHHF++G+C
Sbjct: 868 KLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSC 927
Query: 483 SCGDYW 488
SCGDYW
Sbjct: 928 SCGDYW 933
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 173/388 (44%), Gaps = 76/388 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ IHG ++KLG + + LV++Y K G+ D
Sbjct: 277 GKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLAD------------------------- 311
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
A VF ++K D V W A+I G V + +AL+L +M+R + PN T+
Sbjct: 312 -------AISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSS 364
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
L AC+ +G ELGR +HS + K ++ + V L++MYS+C ++ A F + E+D
Sbjct: 365 ALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKD 424
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HG 230
+ +N++I+G + + +EA+ +F EM +GI + T +L + + HG
Sbjct: 425 LIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHG 484
Query: 231 GLVDLGFE----IFQSMTRDYGIEPQIE---------------HYGCIVDLLSRVGRPEE 271
V GF + S+ YG +E + ++ ++ G+ EE
Sbjct: 485 LSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEE 544
Query: 272 AYDF---ITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL------LDCRSADSGTY 322
A + +M++ PD + SLL+AC + G+Q+ + LD + +S
Sbjct: 545 ALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNS--- 601
Query: 323 VLLSNAYASSGKWKEAVQIRAKMKEAGV 350
L N YA G +A + +++ E G+
Sbjct: 602 --LVNMYAKCGSIDDAGRAFSELTERGI 627
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 134/271 (49%), Gaps = 33/271 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++HG V+ G + LV +Y KC EF D+ +LFDE+PE
Sbjct: 176 GKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPE--------------- 220
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ V W A+ V+ A+ LF EM ++PNE ++
Sbjct: 221 -----------------RNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSS 263
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+++AC+ L G+ IH Y+ K D + AL++MY++ GD+ A+ VFE++K+ D
Sbjct: 264 MVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPD 323
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++N++IAG +H +A+E+ +M GI P T L AC+ GL +LG ++
Sbjct: 324 IVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHS 383
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
S+ + +E + +VD+ S+ E+A
Sbjct: 384 SLMK-MDMESDLFVSVGLVDMYSKCDLLEDA 413
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 148/349 (42%), Gaps = 75/349 (21%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +IH + K GL + S R L+ LY KC F A +L DE E
Sbjct: 75 GLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSE--------------- 119
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
D V W+A+I G +NG AL F EM V+ NE T
Sbjct: 120 -----------------PDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSS 162
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL ACS + L +G+ +H + + + V L+ MY++C + + ++F+E+ ER+
Sbjct: 163 VLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERN 222
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HG 230
V ++N+L + EAV +F EM+ GI+P + + ++NAC+ HG
Sbjct: 223 VVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHG 282
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDL------LSRVGRP--------------- 269
L+ LG++ + ++ Y + DL ++ +P
Sbjct: 283 YLIKLGYD-----WDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLH 337
Query: 270 ---EEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
E+A + + MK I P+ L S L AC G +LG Q+ L+
Sbjct: 338 EHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLM 386
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 106/459 (23%), Positives = 192/459 (41%), Gaps = 83/459 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H ++K+ + S+ + LV++Y KC
Sbjct: 378 GRQLHSSLMKMDMESDLFVSVGLVDMYSKCD----------------------------- 408
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
L+E+A F+ + KD + W A+I G + E AL LF EM ++ + N+ T+
Sbjct: 409 ---LLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLST 465
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L + + L + + R +H K + V +LI+ Y +C ++ A ++FEE D
Sbjct: 466 ILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGD 525
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HG 230
+ ++ S+I A +G+ EA+++F EM + ++P + +LNAC+ H
Sbjct: 526 LVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHV 585
Query: 231 GLVDLGF--EIF--QSMTRDYG---------------IEPQIEHYGCIVDLLSRVGRPEE 271
++ GF +IF S+ Y E I + ++ L++ G +
Sbjct: 586 HILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQ 645
Query: 272 AYDFITNM---KIAPDHIMLGSLLSACKIHG---KLQLGEQIAKRLLDCRSADSGTYVLL 325
A M ++P+HI L S+L AC G + +L + + L + Y +
Sbjct: 646 ALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQE-HYACM 704
Query: 326 SNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKM 385
+ +GK EAV++ KM E N + +LG R + ++ ++
Sbjct: 705 IDLLGRAGKINEAVELVNKMP------------FEANASVWGALLGAARIHKDVELGRRA 752
Query: 386 QELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERL 424
E+ I LE T V+L +I +W RL
Sbjct: 753 AEMLFI--LEPEKSGTHVLLANIYASAGKWENVAEVRRL 789
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 138/331 (41%), Gaps = 54/331 (16%)
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
+ + N P V+ +LS C +L G IH+++ K + + + LIN+YS+C +
Sbjct: 47 IDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRN 106
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
A ++ +E E D+ ++++LI+G A +G A+ F EM G++ + TF VL A
Sbjct: 107 FGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKA 166
Query: 227 CS-----------HGGLVDLGFE--IFQSMTR-----------------DYGIEPQIEHY 256
CS HG +V GFE +F + T D E + +
Sbjct: 167 CSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSW 226
Query: 257 GCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACK----------IHGKL-Q 302
+ ++ EA M I P+ L S+++AC IHG L +
Sbjct: 227 NALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIK 286
Query: 303 LGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVN 362
LG D SA++ L + YA G +A+ + K+K+ + + V
Sbjct: 287 LGYD-----WDPFSANA-----LVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVL 336
Query: 363 NEIHEFILGDIRHPQREQIYKKMQELKQIVK 393
+E HE L + +R I + L +K
Sbjct: 337 HEHHEQALELLGQMKRSGICPNIFTLSSALK 367
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 40/200 (20%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+++H +LK G + LV +Y KCG DA + F E+ E +V+ + MI
Sbjct: 579 QGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTE-RGIVSWSAMIG-- 635
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
GL ++G +AL LF +M ++ V PN +T+V
Sbjct: 636 -----------------------------GLAQHGHGRQALQLFNQMLKEGVSPNHITLV 666
Query: 121 CVLSACSQLGALELGRWIHSYM----GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
VL AC+ G + + M G + ++ +I++ R G I++A+++ +
Sbjct: 667 SVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHY---ACMIDLLGRAGKINEAVELVNK 723
Query: 177 MK-ERDVTTYNSLIAGLAMH 195
M E + + + +L+ +H
Sbjct: 724 MPFEANASVWGALLGAARIH 743
>gi|356524110|ref|XP_003530675.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Glycine max]
Length = 611
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/498 (41%), Positives = 301/498 (60%), Gaps = 45/498 (9%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+++H VLK G S+ LV Y CG A ++F +M E N+ V+ +MI+ Y
Sbjct: 149 EGKQVHAHVLKHGFESDTYICNSLVHFYATCGCLDLAEKMFYKMSERNE-VSWNIMIDSY 207
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ G+ + A +F GEM R D P+ T+
Sbjct: 208 AKGGIFDTALRMF---------------------GEMQRVHD-----------PDGYTMQ 235
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHI----VGGALINMYSRCGDIDKALQVFEE 176
V+SAC+ LGAL LG W+H+Y+ K + D N + V L++MY + G+++ A QVFE
Sbjct: 236 SVISACAGLGALSLGLWVHAYILK-KCDKNMVDDVLVNTCLVDMYCKSGELEIAKQVFES 294
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN-QGIRPTKVTFVGVLNACSHGGLVDL 235
M RD+ +NS+I GLAMHG + A+ + M+ + I P +TFVGVL+AC+H G+VD
Sbjct: 295 MAFRDLNAWNSMILGLAMHGEAKAALNYYVRMVKVEKIVPNSITFVGVLSACNHRGMVDE 354
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA- 294
G F MT++Y +EP++EHYGC+VDL +R GR EA + ++ M I PD ++ SLL A
Sbjct: 355 GIVHFDMMTKEYNVEPRLEHYGCLVDLFARAGRINEALNLVSEMSIKPDAVIWRSLLDAC 414
Query: 295 CKIHGKLQLGEQIAKRLLDCRSA--DSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
CK + ++L E++AK++ + + SG YVLLS YAS+ +W + +R M E GV K
Sbjct: 415 CKQYASVELSEEMAKQVFESEGSVCSSGVYVLLSKVYASACRWNDVGLLRKLMSEKGVTK 474
Query: 353 EPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSP--STEVVLHDIED 410
EPGCS IE++ +HEF GD HP+ E IYK + E+++ ++ GY P S ++ ++ D
Sbjct: 475 EPGCSIIEIDGVVHEFFAGDTTHPKSENIYKVVTEIEEKLESIGYLPDYSGAPMVDEVND 534
Query: 411 WEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRD 470
K L +HSERLAI +G++++KP IRV KNLRVCNDCH + KLI+ I +IIVRD
Sbjct: 535 -GKLNTLRLHSERLAIAFGILNSKPDVPIRVFKNLRVCNDCHRVTKLISRIYNVEIIVRD 593
Query: 471 RNRFHHFENGTCSCGDYW 488
R RFHHF++GTCSC DYW
Sbjct: 594 RARFHHFKDGTCSCMDYW 611
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 116/253 (45%), Gaps = 12/253 (4%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMA---RALDLFREM---QRDNVRPNEVTIVCV 122
A VF ++ W +I R+ +A++L++ M + P+ T V
Sbjct: 78 ATRVFHHFPNPNSFMWNTLIRVYARSTNTNHKHKAMELYKTMMTMEEKTAVPDNHTFPIV 137
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L AC+ +L G+ +H+++ KH + + + +L++ Y+ CG +D A ++F +M ER+
Sbjct: 138 LKACAYTFSLCEGKQVHAHVLKHGFESDTYICNSLVHFYATCGCLDLAEKMFYKMSERNE 197
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIR-PTKVTFVGVLNACSHGGLVDLGFEIFQ 241
++N +I A G A+ MF EM Q + P T V++AC+ G + LG +
Sbjct: 198 VSWNIMIDSYAKGGIFDTALRMFGEM--QRVHDPDGYTMQSVISACAGLGALSLGLWVHA 255
Query: 242 SMTR--DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+ + D + + C+VD+ + G E A +M D S++ +HG
Sbjct: 256 YILKKCDKNMVDDVLVNTCLVDMYCKSGELEIAKQVFESMAFR-DLNAWNSMILGLAMHG 314
Query: 300 KLQLGEQIAKRLL 312
+ + R++
Sbjct: 315 EAKAALNYYVRMV 327
>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
Length = 677
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/440 (42%), Positives = 285/440 (64%), Gaps = 4/440 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DVV +T +++ Y ++G ++ A +VF + ++ V W+A+I G +NG ALDLFRE+Q
Sbjct: 242 DVVTTTSLVSMYAKNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQ 301
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
D ++P +V L AC+ +G L+LG+ IH ++ + R++ I+G A+++MYS+CG ++
Sbjct: 302 ADGLQPCSWALVSALLACASVGFLKLGKSIHGFILR-RLEWQCILGTAVLDMYSKCGSLE 360
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A ++F ++ RD+ +N++IA HG +A+ +F+E+ GI+P TF +L+A S
Sbjct: 361 SARKLFNKLSSRDLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALS 420
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLV+ G F M +++GIEP +HY CIVDLL+R G EEA D + +M+ P +
Sbjct: 421 HSGLVEEGKFWFDRMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIW 480
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
LLS C + KL+LGE IAK++L+ R D G L+SN YA++ KW + +IR MK++
Sbjct: 481 VILLSGCLNNKKLELGETIAKKILELRPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDS 540
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
G +K PG S IEV H F++ D HPQ +I K + +L ++ GY P TE V HD+
Sbjct: 541 GSKKVPGYSLIEVKGTRHAFVMEDQSHPQHREILKMVAKLNSEMRKLGYVPRTEFVYHDL 600
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
++ + L+ HSERLAI +GL++T P T + ++KNLRVC DCH IK I+ I R+I+V
Sbjct: 601 DE---DQLLSYHSERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVV 657
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD RFHHF++G CSCGDYW
Sbjct: 658 RDAKRFHHFKDGACSCGDYW 677
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 131/298 (43%), Gaps = 48/298 (16%)
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W ++ R G AL +FR + + RPN T L+AC++LG L+ +
Sbjct: 76 WNGLLSAHSRAGAPGAALRVFRALP-SSARPNSTTFTLTLTACARLGDLDAAESVRVRAF 134
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
+ V AL+++YSRCG +++A++VF+ M +D +++++AG GR +EA+
Sbjct: 135 AAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALA 194
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
M+ M G+ +V VGV+ AC G +G + + R C+
Sbjct: 195 MYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRH-----------CM---- 239
Query: 264 SRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV 323
D +T + + G L AC++ R++ R + T+
Sbjct: 240 --------RMDVVTTTSLVSMYAKNGHLDVACQVF-----------RMMPYR--NDVTWS 278
Query: 324 LLSNAYASSGKWKEAVQIRAKMKEAGVQKEP--------GCSSI---EVNNEIHEFIL 370
L + +A +G+ EA+ + +++ G+Q C+S+ ++ IH FIL
Sbjct: 279 ALISGFAQNGRAVEALDLFRELQADGLQPCSWALVSALLACASVGFLKLGKSIHGFIL 336
>gi|115467246|ref|NP_001057222.1| Os06g0231400 [Oryza sativa Japonica Group]
gi|51535413|dbj|BAD37283.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595262|dbj|BAF19136.1| Os06g0231400 [Oryza sativa Japonica Group]
gi|125596589|gb|EAZ36369.1| hypothetical protein OsJ_20697 [Oryza sativa Japonica Group]
Length = 602
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/440 (42%), Positives = 272/440 (61%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DVV+ T M+ GLV++A EVF + ++ V W +MI G V+ AL++F EM+
Sbjct: 163 DVVSWTTMVGGLCRLGLVDDAREVFDAMPARNLVSWNSMISGYVKADRFLDALEVFDEMR 222
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
V N L AC+ GAL GR I+ ++ + I+++ + A+++MY +CG +D
Sbjct: 223 ALGVEGNGFVATSALVACTGAGALGRGREIYRWVEQSGIEVDAKLATAVVDMYCKCGCVD 282
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+A VF+ + R +TT+N +I G A+HGR +A+E+F +M G+ P VT + VL AC+
Sbjct: 283 EAWGVFDSLPARGLTTWNCMIGGFAVHGRCDDALELFHQMEAAGVAPDDVTLLNVLTACA 342
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H G V G + +GIEP+ EHYGC+VDL R G+ +EA I M + PD +L
Sbjct: 343 HAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEMPMDPDLAVL 402
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
G+LL ACKIHG + LGE I R++D +SG YVLL+N A +G+W E ++R M E
Sbjct: 403 GALLGACKIHGDVDLGEAIGWRVIDLDPDNSGRYVLLANLLAGAGRWDEVGKVRRLMDER 462
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
V KE G S IEV+ E EF G++RHPQ +IY ++ ++ EGY P T LHD+
Sbjct: 463 NVSKEAGRSVIEVDGEACEFRCGNLRHPQAREIYAMAVDMVSRIRAEGYVPDTGEALHDV 522
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
+ +KE AL HSE+LAI +GL+ +P T+R+ KNLRVC DCH K ++ + R+I+V
Sbjct: 523 AEEDKEAALLCHSEKLAIAFGLLRARPRETLRITKNLRVCRDCHEATKYVSRVFGREIVV 582
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RDR+RFHHF++G CSC DYW
Sbjct: 583 RDRSRFHHFKDGMCSCKDYW 602
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 92/197 (46%), Gaps = 34/197 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GREI+ V + G+ + +V++Y KCG +A +FD +P + MI +
Sbjct: 249 GREIYRWVEQSGIEVDAKLATAVVDMYCKCGCVDEAWGVFDSLP-ARGLTTWNCMIGGFA 307
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG ++A E LF +M+ V P++VT++
Sbjct: 308 VHGRCDDALE-------------------------------LFHQMEAAGVAPDDVTLLN 336
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VL+AC+ G + G R+++ + +H I+ G +++++ R G +D+A +V +EM +
Sbjct: 337 VLTACAHAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEMPMD 396
Query: 180 RDVTTYNSLIAGLAMHG 196
D+ +L+ +HG
Sbjct: 397 PDLAVLGALLGACKIHG 413
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/441 (40%), Positives = 277/441 (62%), Gaps = 1/441 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D++ ++N Y E G ++ A F ++ KD V WT+MI V NG AL+LF ++
Sbjct: 483 DIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLK 542
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ N++P+ + I+ LSA + L +L+ G+ IH ++ + L + +L++MY+ CG ++
Sbjct: 543 QTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVE 602
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+ ++F +K+RD+ + S+I MHG +A+ +F++M +Q + P +TF+ +L ACS
Sbjct: 603 NSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACS 662
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GL+ G F+ M Y +EP EHY C+VDLLSR EEAY F+ NM I P +
Sbjct: 663 HSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIW 722
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+LL AC IH +LGE AK LL + +SG Y L+SN +A+ G+W + ++R +MK
Sbjct: 723 CALLGACHIHSNKELGELAAKELLQSDTENSGKYALISNIFAADGRWNDVEEVRLRMKGN 782
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIV-KLEGYSPSTEVVLHD 407
G++K PGCS IEV+N+IH F+ D HPQ + IY K+ + +++ K GY T+ V H+
Sbjct: 783 GLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLEKKGGYIAQTKFVFHN 842
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
+ + EK L HSERLA+ YGL+ T T IR+ KNLR+C+DCH+ K+ + +++R ++
Sbjct: 843 VSEEEKTQMLYGHSERLALGYGLLVTPKGTCIRITKNLRICDDCHTFFKIASEVSQRPLV 902
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
VRD NRFHHFE G CSCGD+W
Sbjct: 903 VRDANRFHHFERGLCSCGDFW 923
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 146/291 (50%), Gaps = 32/291 (10%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV + +I Y + G +E+A VF + +D V W ++ GLV+N + AL+ FR+MQ
Sbjct: 282 DVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQ 341
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+P++V+++ +++A + G L G+ +H+Y ++ +D N +G L++MY++C +
Sbjct: 342 NSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVK 401
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
FE M E+D+ ++ ++IAG A + +EA+ +FR++ +G+ + VL ACS
Sbjct: 402 YMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACS 461
Query: 229 -----------HGGLV--DLGFEIFQ-SMTRDYGIEPQIEH---------------YGCI 259
HG + DL + Q ++ YG I++ + +
Sbjct: 462 GLKSRNFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSM 521
Query: 260 VDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQI 307
+ G P EA + ++K I PD I + S LSA L+ G++I
Sbjct: 522 ITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEI 572
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 134/296 (45%), Gaps = 38/296 (12%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+++H +LK L + +T KLV +YGKCG +DA+++FDEM E
Sbjct: 64 QGQQLHALLLKSHLSAFLAT--KLVLMYGKCGSLRDAVKVFDEMSE-------------- 107
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ W A++ V +G+ A++L+++M+ V + T
Sbjct: 108 ------------------RTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFP 149
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE--MK 178
VL AC LG LG IH K V ALI MY +CGD+ A +F+ M+
Sbjct: 150 SVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMME 209
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
+ D ++NS+I+ G +EA+ +FR M G+ TFV L V LG
Sbjct: 210 KEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMG 269
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
I ++ + + ++ + ++ GR E+A +M + D++ +LLS
Sbjct: 270 IHGAVLKSNHF-ADVYVANALIAMYAKCGRMEDAGRVFESM-LCRDYVSWNTLLSG 323
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 121/264 (45%), Gaps = 31/264 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G EIHG +K G L+ +YGKCG+ A LFD +
Sbjct: 164 GAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGI----------------- 206
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ +DTV W ++I V G AL LFR MQ V N T V
Sbjct: 207 -------------MMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVA 253
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
L ++LG IH + K + V ALI MY++CG ++ A +VFE M RD
Sbjct: 254 ALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRD 313
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
++N+L++GL + +A+ FR+M N G +P +V+ + ++ A G + G E+
Sbjct: 314 YVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHA 373
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSR 265
R+ G++ ++ +VD+ ++
Sbjct: 374 YAIRN-GLDSNMQIGNTLVDMYAK 396
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 165/357 (46%), Gaps = 41/357 (11%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+E+H ++ GL SN LV++Y KC C
Sbjct: 367 KGKEVHAYAIRNGLDSNMQIGNTLVDMYAKC---------------------------CC 399
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V++ + +AFE KD + WT +I G +N A++LFR++Q + + + I
Sbjct: 400 VKY--MGHAFECMHE---KDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIG 454
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHI-VGGALINMYSRCGDIDKALQVFEEMKE 179
VL ACS L + R IH Y+ K DL I + A++N+Y G ID A + FE ++
Sbjct: 455 SVLRACSGLKSRNFIREIHGYVFKR--DLADIMLQNAIVNVYGEVGHIDYARRAFESIRS 512
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+D+ ++ S+I +G +EA+E+F + I+P + + L+A ++ + G EI
Sbjct: 513 KDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEI 572
Query: 240 FQSMTRD-YGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
+ R + +E I +VD+ + G E + ++K D I+ S+++A +H
Sbjct: 573 HGFLIRKGFFLEGPIA--SSLVDMYACCGTVENSRKMFHSVK-QRDLILWTSMINANGMH 629
Query: 299 GKLQLGEQIAKRLLDCRS-ADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
G + K++ D D T++ L A + SG E + MK G Q EP
Sbjct: 630 GCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKY-GYQLEP 685
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 92/191 (48%), Gaps = 12/191 (6%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L C AL G+ +H+ + K L+ + L+ MY +CG + A++VF+EM ER
Sbjct: 52 LLDLCVAAKALPQGQQLHALLLKSH--LSAFLATKLVLMYGKCGSLRDAVKVFDEMSERT 109
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++N+L+ G+ +EA+E++++M G+ TF VL AC G LG EI
Sbjct: 110 IFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHG 169
Query: 242 SMTR-DYG-----IEPQIEHYGCIVDL-LSRV---GRPEEAYDFITNMKIAPDHIMLGSL 291
+ YG I YG DL +RV G E D ++ I H+ G+
Sbjct: 170 VAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNC 229
Query: 292 LSACKIHGKLQ 302
L A + ++Q
Sbjct: 230 LEALSLFRRMQ 240
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/488 (38%), Positives = 291/488 (59%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+++H +++ + N LV++Y KC K A
Sbjct: 293 EGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEA--------------------- 331
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
VF ++ K+ V WTAM+ G +NG A+ F +MQ+ + P++ T+
Sbjct: 332 -----------VFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLG 380
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+S+C+ L +LE G H+ + V AL+ +Y +CG I+ + ++F E+ +
Sbjct: 381 SVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFK 440
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D T+ +L++G A G++ E + +F M+ G++P KVTF+GVL+ACS GLV+ G +IF
Sbjct: 441 DEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIF 500
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+SM ++GI P +HY C++DL SR GR EEA +FI M +PD I +LLS+C+ +G
Sbjct: 501 ESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGN 560
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+ +G+ A+ L++ ++ +YVLLS+ YA+ GKW+E ++R M++ G++KEPGCS I+
Sbjct: 561 MDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIK 620
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
N++H F D +P +QIY ++++L + EGY P VLHD+ D EK L H
Sbjct: 621 YKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDVGDSEKIKMLNHH 680
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI +GL+ P IRVVKNLRVC+DCH+ K I+ IT R+I+VRD RFH F++G
Sbjct: 681 SEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITNREILVRDTARFHLFKDG 740
Query: 481 TCSCGDYW 488
TCSCGD+W
Sbjct: 741 TCSCGDFW 748
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 191/380 (50%), Gaps = 38/380 (10%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+IHG V+K G S LV++Y K G A ++FDE+PE N V+ +T+++ +
Sbjct: 162 GRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGL-M 220
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G VE++ +F ++ +D++ WT+MI G +NG A+D+FREM+ +N++ ++ T
Sbjct: 221 RCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGS 280
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL+AC + AL+ G+ +H+Y+ + N V AL++MY +C +I A VF++M ++
Sbjct: 281 VLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKN 340
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH------------ 229
V ++ +++ G +G S EAV+ F +M GI P T V+++C++
Sbjct: 341 VVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHA 400
Query: 230 ----GGLVDLGFEIFQSMTRDYGIEPQIEH---------------YGCIVDLLSRVGRPE 270
GL+ + ++ YG IE + +V ++ G+
Sbjct: 401 RALTSGLISF-ITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKAN 459
Query: 271 EAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRS--ADSGTYVLL 325
E +M + PD + +LSAC G ++ G QI + +++ Y +
Sbjct: 460 ETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCM 519
Query: 326 SNAYASSGKWKEAVQIRAKM 345
+ ++ +G+ +EA KM
Sbjct: 520 IDLFSRAGRIEEARNFINKM 539
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 175/364 (48%), Gaps = 26/364 (7%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+ + +H ++K L+ Y K G A ++FD+MP N +T++ + Y
Sbjct: 27 KAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTIL-SAY 85
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN--VRPNEVT 118
+ G V +F + +D V W ++I G G + +++ + M +++ N +T
Sbjct: 86 SKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRIT 145
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
+L S+ G ++LGR IH ++ K VG L++MYS+ G I A +VF+E+
Sbjct: 146 FSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELP 205
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
E++V YN+LI GL GR ++ +F EM + +++ ++ + GL +
Sbjct: 206 EKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRER----DSISWTSMITGFTQNGLDRDAID 261
Query: 239 IFQSMTRDYGIEPQIEHY--GCIVDLLSRV-----GRPEEAYDFITNMKIAPDHIMLGSL 291
IF+ M + Q++ Y G ++ V G+ AY T+ K D+I + S
Sbjct: 262 IFREMKLE---NLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYK---DNIFVASA 315
Query: 292 L--SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
L CK ++ E + K+ + C++ S T +L+ Y +G +EAV+ + M++ G
Sbjct: 316 LVDMYCKCK-NIKSAEAVFKK-MTCKNVVSWTAMLV--GYGQNGYSEEAVKTFSDMQKYG 371
Query: 350 VQKE 353
++ +
Sbjct: 372 IEPD 375
>gi|297837569|ref|XP_002886666.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
gi|297332507|gb|EFH62925.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
Length = 608
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/501 (40%), Positives = 303/501 (60%), Gaps = 55/501 (10%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+++H Q++K G + L+ YG CG C D+
Sbjct: 150 EGKQVHCQIVKHGFSGDVYVNNGLIHFYGSCG--------------CLDL---------- 185
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
A +VF + + V W +MID LVR GE AL LFR+MQ+ + P+ T+
Sbjct: 186 --------ARKVFDEMPERSLVSWNSMIDALVRVGEYDSALQLFRDMQK-SFEPDGYTMQ 236
Query: 121 CVLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
VLSAC+ LG+L LG W H ++ ++ + ++ ++ +LI MY +CG + A QVF+ M
Sbjct: 237 SVLSACAGLGSLSLGTWSHVFLLRNCDVDVAMDVLIKNSLIEMYCKCGSLRMAEQVFQGM 296
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG--IRPTKVTFVGVLNACSHGGLVDL 235
++ D+ ++N++I G A HG++ EA+ F M+ +G ++P VTFV +L AC+H G+V+
Sbjct: 297 RKHDLASWNAMILGFATHGKAEEAMNCFDCMVKEGKNVKPNSVTFVALLIACNHRGMVNK 356
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G + F M R+YGIEP +EHYGCI+DLL+R G EA D + +M + PD ++ SLL AC
Sbjct: 357 GRQYFDMMVREYGIEPALEHYGCIIDLLARAGYITEAIDMVMSMPMKPDAVIWRSLLDAC 416
Query: 296 -KIHGKLQLGEQIAKRLL----DCRSADS---GTYVLLSNAYASSGKWKEAVQIRAKMKE 347
K ++L E+IA+ ++ D +S++S G YVLLS YAS+ +W + +R M +
Sbjct: 417 CKKGASVELSEEIARNIIGTMEDNQSSNSNCSGAYVLLSRVYASANRWNDVGIVRKLMSD 476
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
G++KEPGCSSIE+N +EF GD HPQ +QIY++++ + ++ ++
Sbjct: 477 HGIRKEPGCSSIEINGISNEFFAGDTSHPQTKQIYQQLKVIDDRLR---------SIVDA 527
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
D KE++L +HSERLAI +GLIS P T IR+ KNLRVC+DCH + KLI+ + +II
Sbjct: 528 TNDSSKEYSLRLHSERLAIAFGLISLPPQTPIRIFKNLRVCSDCHEVTKLISKVFNTEII 587
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
VRDR RFHHF++G+CSC DYW
Sbjct: 588 VRDRVRFHHFKDGSCSCLDYW 608
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 146/340 (42%), Gaps = 47/340 (13%)
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRN-GEMARALDLFREM-QRDNVRPNEVTIVCVL 123
V AF VF ++ + W +I + A L+R+M +R P++ T VL
Sbjct: 80 VNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESAPDKHTFPFVL 139
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
AC+ + L G+ +H + KH + V LI+ Y CG +D A +VF+EM ER +
Sbjct: 140 KACAYIFGLSEGKQVHCQIVKHGFSGDVYVNNGLIHFYGSCGCLDLARKVFDEMPERSLV 199
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
++NS+I L G A+++FR+M + P T VL+AC+ G + LG +
Sbjct: 200 SWNSMIDALVRVGEYDSALQLFRDM-QKSFEPDGYTMQSVLSACAGLGSLSLGTWSHVFL 258
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA-CKIHGKLQ 302
R+ C VD +A D ++ SL+ CK G L+
Sbjct: 259 LRN-----------CDVD-------------------VAMDVLIKNSLIEMYCKC-GSLR 287
Query: 303 LGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVN 362
+ EQ+ + + R D ++ + +A+ GK +EA+ M + G +P +
Sbjct: 288 MAEQVFQGM---RKHDLASWNAMILGFATHGKAEEAMNCFDCMVKEGKNVKPNSVT---- 340
Query: 363 NEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTE 402
F+ I R + K Q +V+ G P+ E
Sbjct: 341 -----FVALLIACNHRGMVNKGRQYFDMMVREYGIEPALE 375
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 96/236 (40%), Gaps = 48/236 (20%)
Query: 155 GALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMH-GRSIEAVEMFREMINQG- 212
G ++ + S D++ A +VF+ ++ +N+LI A R EA ++R+M+ +G
Sbjct: 68 GKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGE 127
Query: 213 IRPTKVTFVGVLNACS-----------------HG------------------GLVDLGF 237
P K TF VL AC+ HG G +DL
Sbjct: 128 SAPDKHTFPFVLKACAYIFGLSEGKQVHCQIVKHGFSGDVYVNNGLIHFYGSCGCLDLAR 187
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK--IAPDHIMLGSLLSAC 295
++F M E + + ++D L RVG + A +M+ PD + S+LSAC
Sbjct: 188 KVFDEMP-----ERSLVSWNSMIDALVRVGEYDSALQLFRDMQKSFEPDGYTMQSVLSAC 242
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNA----YASSGKWKEAVQIRAKMKE 347
G L LG LL D VL+ N+ Y G + A Q+ M++
Sbjct: 243 AGLGSLSLGTWSHVFLLRNCDVDVAMDVLIKNSLIEMYCKCGSLRMAEQVFQGMRK 298
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/486 (39%), Positives = 282/486 (58%), Gaps = 32/486 (6%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
R+IH LK G + L++ YGKCG
Sbjct: 333 RQIHALSLKSGFEFDNYVVNSLIDTYGKCGH----------------------------- 363
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
VE+A VF + D V +T+++ ++G+ AL L+ EMQ ++P+ +
Sbjct: 364 ---VEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSL 420
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L+AC+ L A E G+ +H ++ K + G +L+NMY++CG I+ A F + R +
Sbjct: 421 LNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGI 480
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
+++++I GLA HG EA+++F++M+ G+ P +T V VL AC+H GLV F S
Sbjct: 481 VSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNS 540
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
M +GIEP EHY C++DLL R G+ E A + + M + ++ G+LL A +IH +
Sbjct: 541 MKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNID 600
Query: 303 LGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVN 362
LGEQ A+ LL SGT+VLL+N YAS G W + ++R MK+ V+KEPG S +EV
Sbjct: 601 LGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVK 660
Query: 363 NEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSE 422
++++ FI+GD H + +IY K+ EL ++K GY P E+ LHD+E EKE L HSE
Sbjct: 661 DKVYTFIVGDRSHSRSTEIYAKLDELSDLLKKAGYVPMVEIDLHDVERSEKEQLLYHHSE 720
Query: 423 RLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTC 482
+LA+ +GLI+T P IRV KNLR+C DCH+++K I+ I R+IIVRD NRFHHF G+C
Sbjct: 721 KLAVAFGLIATPPGAPIRVKKNLRICFDCHTVLKFISKIVSREIIVRDTNRFHHFREGSC 780
Query: 483 SCGDYW 488
SCG+YW
Sbjct: 781 SCGEYW 786
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 168/377 (44%), Gaps = 76/377 (20%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR+IHG ++KLG S+ + LV++Y K
Sbjct: 129 QGRKIHGYLIKLGYDSDAFSANALVDMYAKV----------------------------- 159
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G++E+A VF + D V W A+I G V + RAL+L REM + + PN T+
Sbjct: 160 ---GILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLS 216
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
L AC+ + ELGR +HS + K + + +G LI+MYS+C +D A VF+ M ER
Sbjct: 217 SALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPER 276
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------H 229
D+ +N++I+G + + EA +F M +GI + T VL + + H
Sbjct: 277 DMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIH 336
Query: 230 GGLVDLGFE----IFQSMTRDYGIEPQIEHY------GCIVDLL---------SRVGRPE 270
+ GFE + S+ YG +E IVDL+ ++ G+ E
Sbjct: 337 ALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGE 396
Query: 271 EAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL------DCRSADSGT 321
EA M+ I PD + SLL+AC + G+Q+ +L D + +S
Sbjct: 397 EALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNS-- 454
Query: 322 YVLLSNAYASSGKWKEA 338
L N YA G ++A
Sbjct: 455 ---LVNMYAKCGSIEDA 468
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 116/244 (47%), Gaps = 32/244 (13%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++HG V+ G S+ LV LY KCG F DA LFD +P+
Sbjct: 29 GKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAIPD--------------- 73
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ V W A+ V + A+ LF +M +RPNE ++
Sbjct: 74 -----------------RSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSS 116
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+++ C+ L GR IH Y+ K D + AL++MY++ G ++ A VF+E+ + D
Sbjct: 117 MINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPD 176
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++N++IAG +H A+E+ REM G+ P T L AC+ L +LG ++
Sbjct: 177 IVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHS 236
Query: 242 SMTR 245
S+ +
Sbjct: 237 SLIK 240
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 30/206 (14%)
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M ++ NE VL AC+ L LG+ +H + D + V +L+ +Y++CG
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLA---MHGRSIEAVEMFREMINQGIRPTKVTFVGV 223
A +F+ + +R V ++N+L + MHG EAV +F +M+ GIRP + + +
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHG---EAVSLFHDMVLSGIRPNEFSLSSM 117
Query: 224 LNACS-----------HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
+N C+ HG L+ LG+ + +VD+ ++VG E+A
Sbjct: 118 INVCTGLEDSVQGRKIHGYLIKLGY------------DSDAFSANALVDMYAKVGILEDA 165
Query: 273 YDFITNMKIAPDHIMLGSLLSACKIH 298
+ PD + ++++ C +H
Sbjct: 166 SSVFDEIA-KPDIVSWNAIIAGCVLH 190
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 96/219 (43%), Gaps = 36/219 (16%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+++H +LK G S+ LV +Y KCG +DA F +P +V+ + MI
Sbjct: 432 QGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIP-VRGIVSWSAMIGGL 490
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+HG + AL LF++M + V PN +T+V
Sbjct: 491 AQHGYGK-------------------------------EALQLFKQMLKVGVPPNHITLV 519
Query: 121 CVLSACSQLGAL-ELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
VL AC+ G + E + +S I+ +I++ R G ++ A+++ +M
Sbjct: 520 SVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPF 579
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTK 217
+ + + +L+ +H ++I+ E EM+ + P K
Sbjct: 580 QANALVWGALLGAARIH-KNIDLGEQAAEML-LALEPEK 616
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/491 (39%), Positives = 292/491 (59%), Gaps = 17/491 (3%)
Query: 2 GRE-IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
G+E +HG V+K + SNR + L+++Y + G +A +F M + D+V+ +I
Sbjct: 384 GKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIF-AMIDLRDIVSWNTLITGC 442
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGE-MARALDLFREMQRDNVRPNEVTI 119
+ GL+ AF++ +++ + +GE M D + QR PN +T+
Sbjct: 443 IVQGLISEAFQLVREMQLPSSAA----------SGETMLEGDDTSVDGQR--CMPNNITL 490
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+ +L C+ L A G+ IH Y +H ++ + VG AL++MY++CG + A VF+ +
Sbjct: 491 MTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPR 550
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSHGGLVDLGFE 238
R+V T+N LI MHG EA+ +F M+ G P +VTF+ L ACSH GLVD G E
Sbjct: 551 RNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLE 610
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI-MLGSLLSACKI 297
+FQ M RDYG EP + C+VD+L R GR +EAY I++M + ++L AC++
Sbjct: 611 LFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRL 670
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
H ++LG A+RL + ++ YVLL N Y+++G W+ + ++R M++ GV KEPGCS
Sbjct: 671 HRNVKLGRIAAERLFELEPDEASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCS 730
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IE++ IH F+ G+ HP+ Q++ M L + ++ EGY P T VLHD+++ EK L
Sbjct: 731 WIELDGAIHRFMAGESAHPESAQVHAHMDALWERMRREGYVPDTSCVLHDVDEAEKAAML 790
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LAI +GL+ P TIRV KNLRVCNDCH K I+ + R+I++RD RFHHF
Sbjct: 791 RYHSEKLAIAFGLLRAPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHF 850
Query: 478 ENGTCSCGDYW 488
+GTCSCGDYW
Sbjct: 851 RDGTCSCGDYW 861
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 136/318 (42%), Gaps = 59/318 (18%)
Query: 78 VKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLG--ALELG 135
++D V + ++I L ALD R+M D+ + T+V VL ACS L LG
Sbjct: 115 LRDAVSYNSLISALCLFRRWGHALDALRDMLADH-EVSSFTLVSVLLACSHLADQGHRLG 173
Query: 136 RWIHSYMGKH--------RIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER--DVTTY 185
R H++ KH R N AL++MY+R G +D A ++F D+ T+
Sbjct: 174 REAHAFALKHGFLDKGRERFPFN-----ALLSMYARLGLVDDAQRLFFSSGAGVGDLVTW 228
Query: 186 NSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR 245
N++I+ L GR EAV++ +M+ G+RP VTF L ACS L+ +G E+ + +
Sbjct: 229 NTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLK 288
Query: 246 D----------------YGIEPQIEHYGCIVDLLSRVGRP------------------EE 271
D Y Q+ H + D++ GR EE
Sbjct: 289 DDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEE 348
Query: 272 AYDFITNMKI----APDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV--LL 325
A + + M+ AP + +L AC ++ G++ + R S +V L
Sbjct: 349 AIELFSRMEAEAGCAPSETTMAGVLPACA-RSEVFTGKEAVHGYVVKRDMASNRFVQNAL 407
Query: 326 SNAYASSGKWKEAVQIRA 343
+ YA G+ EA I A
Sbjct: 408 MDMYARLGRMDEAHTIFA 425
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 123/289 (42%), Gaps = 54/289 (18%)
Query: 2 GREIHGQVLKLG-LRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
GRE+H VLK L +N LV++Y + A ++FD +PE
Sbjct: 279 GREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPE-------------- 324
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEM-ARALDLFREMQRD-NVRPNEVT 118
HG + W AMI G ++G M A++LF M+ + P+E T
Sbjct: 325 --HG--------------RQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETT 368
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
+ VL AC++ +H Y+ K + N V AL++MY+R G +D+A +F +
Sbjct: 369 MAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMID 428
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMI--------------------NQGIRPTKV 218
RD+ ++N+LI G + G EA ++ REM Q P +
Sbjct: 429 LRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNI 488
Query: 219 TFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
T + +L C+ G EI R + +E + +VD+ ++ G
Sbjct: 489 TLMTLLPGCAVLAAPARGKEIHGYAVR-HALESDLAVGSALVDMYAKCG 536
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 104/244 (42%), Gaps = 47/244 (19%)
Query: 153 VGGALINMYSRCGDIDKALQVFEEMKE--RDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
V AL+ Y+RCGD+D AL +F RD +YNSLI+ L + R A++ R+M+
Sbjct: 87 VSNALLTAYARCGDLDAALALFAATPPDLRDAVSYNSLISALCLFRRWGHALDALRDMLA 146
Query: 211 QGIRPTKVTFVGVLNACSH------------------GGLVDLGFEIFQ-----SMTRDY 247
+ T V VL ACSH G +D G E F SM
Sbjct: 147 DH-EVSSFTLVSVLLACSHLADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARL 205
Query: 248 GIEPQIEH--------------YGCIVDLLSRVGRPEEA----YDFITNMKIAPDHIMLG 289
G+ + + ++ LL + GR EEA YD + + + PD +
Sbjct: 206 GLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVA-LGVRPDGVTFA 264
Query: 290 SLLSACKIHGKLQLGEQIAKRLL--DCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
S L AC L +G ++ +L D +A+S L + YAS+ + A ++ + E
Sbjct: 265 SALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPE 324
Query: 348 AGVQ 351
G Q
Sbjct: 325 HGRQ 328
>gi|224074129|ref|XP_002304264.1| predicted protein [Populus trichocarpa]
gi|222841696|gb|EEE79243.1| predicted protein [Populus trichocarpa]
Length = 499
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/489 (37%), Positives = 295/489 (60%), Gaps = 34/489 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++H ++L G +S+ L++LY C + +A ++FDEM +
Sbjct: 43 GEQVHARILSDGHQSDSLLLTNLMDLYSLCDKGSEACKVFDEMRQ--------------- 87
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV--RPNEVTI 119
+DT+ W +I +RN L +F M + P++VT
Sbjct: 88 -----------------RDTIAWNVLISCYMRNRRTRDVLVIFDGMLSGELGCEPDDVTC 130
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+ +L AC+ LGALE G +H ++ + D + +LI MYS+ G++DKA VF+ M
Sbjct: 131 LLLLQACANLGALEFGEKVHGHIVERGYDNATNLCNSLIAMYSQFGNLDKAFGVFKGMHN 190
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
++V T++++I+GLAM+G EA+ F EM+ G+ P +TF GVL+ACS+ GLVD G I
Sbjct: 191 KNVVTWSAIISGLAMNGYGREAIGAFEEMLKMGVLPDDLTFTGVLSACSNCGLVDKGMII 250
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F M++++GI P I HYGC+VDLL R G+ +AY I +M++ PD + +LL AC+IH
Sbjct: 251 FARMSKEFGIVPNIHHYGCMVDLLGRAGQLHQAYQLIMSMRVKPDSTIWRTLLGACRIHR 310
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+ LGE + + L++ ++ ++G YVLL N Y+S WK+ ++R MKE G+Q P SSI
Sbjct: 311 NVILGEHVVEHLIELKAQEAGDYVLLFNLYSSVDNWKKVTELRKFMKEKGIQTTPASSSI 370
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E+ ++HEF++ D+ HPQ+++IY+ + E+ + +K+ GY L +++ EK + L+
Sbjct: 371 ELKGKVHEFVVDDVSHPQKDEIYEMLDEISKQLKIAGYVAEITSELPNLDAEEKRYVLSY 430
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +G+++T P TTIR+ KNLR+C DCH+ K+++ + R++I+ D RFHHF
Sbjct: 431 HSEKLAIAFGVLATPPGTTIRIAKNLRICVDCHNFAKILSGVYNRQVIITDHTRFHHFRG 490
Query: 480 GTCSCGDYW 488
G CSC DYW
Sbjct: 491 GHCSCNDYW 499
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/487 (41%), Positives = 286/487 (58%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H VLK+GL N L+++Y KCG
Sbjct: 262 GKQVHCHVLKVGLDGNVFVSNALMDVYAKCGR---------------------------- 293
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++N+ ++F + ++ V W MI G V++G+ +AL L++ M V+ +EVT
Sbjct: 294 ----LDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSS 349
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL AC+ L A+ELG IHS K D + +VG ALI+MY++CG I A VF+ + ERD
Sbjct: 350 VLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERD 409
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
++N++I+G +MHG EA++ F+ M P K+TFV +L+ACS+ GL+D+G F+
Sbjct: 410 EISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFK 469
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM +DYGIEP +EHY C+V LL R G ++A I + + P+ + +LL AC IH +
Sbjct: 470 SMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDV 529
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
LG A+++L D T+VLLSN YA + +W +R MK GV+KEPG S IE
Sbjct: 530 DLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIEN 589
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+H F +GD HP + I ++ L + GY P VL D+ED EK+ L +HS
Sbjct: 590 QGIVHYFSVGDTSHPDMKMISGMLEWLNMKTEKAGYVPDLNAVLRDVEDDEKKRHLWVHS 649
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ERLA+ +GLI T IR++KNLR+C DCHS IKLI+ I +R II+RD NRFHHF++G
Sbjct: 650 ERLALAFGLIRTPSRGHIRILKNLRICTDCHSAIKLISKIVQRDIIIRDMNRFHHFQDGI 709
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 710 CSCGDYW 716
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/522 (20%), Positives = 213/522 (40%), Gaps = 130/522 (24%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
+H + KLG SN L++ Y CG A Q FD + C D+V+ T M+ CY E+
Sbjct: 62 SLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIA-CKDMVSWTGMVACYAEN 120
Query: 64 GLVENAFEVFSRVKV---------------------------------------KDTVCW 84
+++ ++F+ +++ D
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180
Query: 85 TAMIDGLVRNGEMARALDLFREM-------------------------------QRDNVR 113
++D + G+ L +F EM +R V
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVL 240
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
PN+ T VL +C+ + L+LG+ +H ++ K +D N V AL+++Y++CG +D ++++
Sbjct: 241 PNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKL 300
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV 233
F E+ R+ T+N++I G G +A+ +++ M+ ++ ++VT+ VL AC+ +
Sbjct: 301 FMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAM 360
Query: 234 DLGFEIF---------------QSMTRDYGIEPQIEHYGCIVDLLSR------------- 265
+LG +I ++ Y I++ + D+LS
Sbjct: 361 ELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGY 420
Query: 266 -----VGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG 320
VG +A+ + + P+ + S+LSAC G L +G+ K ++ D G
Sbjct: 421 SMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQ----DYG 476
Query: 321 T------YVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGD-I 373
Y + SG +AV++ +++ P +E N ++ +LG +
Sbjct: 477 IEPCMEHYTCMVWLLGRSGHLDKAVKL--------IEEIP----LEPNVKVWRALLGACV 524
Query: 374 RHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
H + + +QI++++ +T V+L +I + W
Sbjct: 525 IH---NDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRW 563
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 134/303 (44%), Gaps = 46/303 (15%)
Query: 79 KDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWI 138
++TV + +I G V++ ++ +DLF + R+ N +L + EL +
Sbjct: 4 RNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYSL 63
Query: 139 HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRS 198
H+ + K + N VG ALI+ Y+ CG ++ A Q F+ + +D+ ++ ++A A + R
Sbjct: 64 HACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRF 123
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNAC-----------SHG---------------GL 232
+++++F EM G P TF GVL AC HG GL
Sbjct: 124 QDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGL 183
Query: 233 VDLG---------FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK--- 280
+DL +F+ M + + + P + ++ ++ + EA + M+
Sbjct: 184 LDLYTKFGDANDVLRVFEEMPK-HDVIP----WSFMISRYAQSNQSREAVELFGQMRRAF 238
Query: 281 IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV--LLSNAYASSGKWKEA 338
+ P+ S+L +C LQLG+Q+ +L D +V L + YA G+ +
Sbjct: 239 VLPNQFTFASVLQSCASIENLQLGKQVHCHVLKV-GLDGNVFVSNALMDVYAKCGRLDNS 297
Query: 339 VQI 341
+++
Sbjct: 298 MKL 300
>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/440 (42%), Positives = 278/440 (63%), Gaps = 1/440 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DVV ST +++ Y ++GL + A VF + ++ V W+A+I L + G AL LFR MQ
Sbjct: 238 DVVISTSLVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQ 297
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ PN +V L ACS LG L+LG+ IH ++ + ++L+ +VG A+I+MYS+CG +
Sbjct: 298 VSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILR-TLELDRMVGTAVIDMYSKCGSLS 356
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +F+++ RD+ ++N +IA HGR +A+ +F+EM +RP TF +L+A S
Sbjct: 357 SAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSALS 416
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLV+ G F M +YGIEP +H CIVDLL+R G EEA + ++ P +L
Sbjct: 417 HSGLVEEGKFWFNCMVNEYGIEPGEKHLVCIVDLLARSGLVEEANGLVASLHSKPTISIL 476
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+LLS C + KL+LGE A+++L+ + D G L+SN YA++ W + ++R MK+
Sbjct: 477 VALLSGCLNNNKLELGESTAEKILELQPGDVGVLALVSNLYAAAKNWYKVREVRKLMKDH 536
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
G +K PGCSSIE+ +H F++ D HPQ QI + + +L ++ GY P TE V HD+
Sbjct: 537 GSKKAPGCSSIEIRGALHTFVMEDQSHPQHRQILQMVMKLDSEMRKMGYIPKTEFVYHDL 596
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
E+ KE L+ HSERLA +GL++T P T + V+KNLRVC DCH IK ++ I R+I+V
Sbjct: 597 EEGVKEQLLSRHSERLATAFGLLNTSPGTRLVVIKNLRVCGDCHDAIKYMSKIADREIVV 656
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD RFHHF++G CSCGDYW
Sbjct: 657 RDAKRFHHFKDGACSCGDYW 676
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 170/313 (54%), Gaps = 13/313 (4%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
ND+ + ++N Y + G +++A +VF R++ +D V W+ M+ G V G+ +A++++ M
Sbjct: 136 NDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRM 195
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+RD + +EV IV V+ AC+ G +G +H Y+ +H + ++ ++ +L++MY++ G
Sbjct: 196 RRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVISTSLVDMYAKNGLF 255
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
D+A +VFE M R+ ++++LI+ LA +G + EA+ +FR M G+ P VG L AC
Sbjct: 256 DQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPNSGPVVGALLAC 315
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
S GL+ LG I + R ++ + ++D+ S+ G A + + ++ D I
Sbjct: 316 SDLGLLKLGKSIHGFILRTLELDRMVG--TAVIDMYSKCGSLSSA-QMLFDKVVSRDLIS 372
Query: 288 LGSLLSACKIHGK----LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEA-VQIR 342
+++ C HG+ L L +++ + + D T+ L +A + SG +E
Sbjct: 373 WNVMIACCGAHGRGRDALSLFQEMKRNEV---RPDHATFASLLSALSHSGLVEEGKFWFN 429
Query: 343 AKMKEAGVQKEPG 355
+ E G+ EPG
Sbjct: 430 CMVNEYGI--EPG 440
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 148/357 (41%), Gaps = 44/357 (12%)
Query: 23 KLVELYGKCGEFKD-----AMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVK 77
+L L C + A+ + C+ ++ S+ + Y G + A +
Sbjct: 5 RLRRLLSSCAALRTLTRLHALLIVSSSASCHHIL-SSCLATAYARAGDLAAAESTLATAP 63
Query: 78 VKDTV--CWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELG 135
+ W A++ R AL +FR + RP+ T LSAC++LG L G
Sbjct: 64 TSPSSIPAWNALLAAHSRGASPHEALRVFRALP-PAARPDSTTFTLALSACARLGDLATG 122
Query: 136 RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMH 195
+ + V +++N+Y++CG +D A++VF+ M++RD T+++++ G
Sbjct: 123 EVVTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNA 182
Query: 196 GRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI---------------- 239
G+ ++A+EM+ M G+ +V VGV+ AC+ G +G +
Sbjct: 183 GQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVIS 242
Query: 240 ------------FQSMTRDYGIEPQIE--HYGCIVDLLSRVGRPEEAYDFITNMKIAPDH 285
F R + + P + ++ L++ G +EA M+++ H
Sbjct: 243 TSLVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLH 302
Query: 286 ----IMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEA 338
++G+LL AC G L+LG+ I +L D + + Y+ G A
Sbjct: 303 PNSGPVVGALL-ACSDLGLLKLGKSIHGFILRTLELDRMVGTAVIDMYSKCGSLSSA 358
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/483 (39%), Positives = 282/483 (58%), Gaps = 4/483 (0%)
Query: 9 VLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMINCYVEHGL 65
+LK + N T L++ G + Q+ +C+ DV + +++ Y G
Sbjct: 143 MLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGK 202
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
++ A VF ++ K+ V W A+I G R G+ AL +F EMQR+ T + S
Sbjct: 203 MDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSG 262
Query: 126 CSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTY 185
+ +GALE G+W+H++M K R L VG +++MY++ G + A +VFE + +D+ T+
Sbjct: 263 LAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTW 322
Query: 186 NSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR 245
NS++ A +G EAV F EM GI ++TF+ +L ACSHGGLV G F M +
Sbjct: 323 NSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFD-MIK 381
Query: 246 DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGE 305
+Y +EP+IEHY +VDLL R G A FI M + P + G+LL+AC++H ++G+
Sbjct: 382 EYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQ 441
Query: 306 QIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEI 365
A + DSG VLL N YAS+G W A ++R MK GV+KEP CS +E+ N +
Sbjct: 442 FAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIGNSV 501
Query: 366 HEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLA 425
H F+ D HP+ E+IYK E+ ++ EGY P + VL +++ E+E L HSE++A
Sbjct: 502 HMFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIA 561
Query: 426 ICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCG 485
+ + LI TIR++KN+R+C DCHS K I+ + +R+I+VRD NRFHHF NG+CSCG
Sbjct: 562 LAFALIQMPAGATIRIMKNIRICGDCHSAFKYISKVFEREIVVRDTNRFHHFSNGSCSCG 621
Query: 486 DYW 488
DYW
Sbjct: 622 DYW 624
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 144/311 (46%), Gaps = 13/311 (4%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D +I+ Y + G V A +VF +++ KD V WT++I G +N A A+ L M
Sbjct: 85 DAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGML 144
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ +PN T +L A +G IH+ K + VG AL++MY+RCG +D
Sbjct: 145 KGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMD 204
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A VF+++ ++ ++N+LI+G A G A+ +F EM G T T+ + + +
Sbjct: 205 MATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLA 264
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHY--GCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
G ++ G + M + ++ + ++D+ ++ G +A + + D +
Sbjct: 265 GIGALEQGKWVHAHMVKS---RQKLTAFVGNTMLDMYAKSGSMIDARKVFERV-LNKDLV 320
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCRSA----DSGTYVLLSNAYASSGKWKEAVQIR 342
S+L+A +G LG++ + R + + T++ + A + G KE
Sbjct: 321 TWNSMLTAFAQYG---LGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYF 377
Query: 343 AKMKEAGVQKE 353
+KE ++ E
Sbjct: 378 DMIKEYNLEPE 388
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 66/123 (53%), Gaps = 2/123 (1%)
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
P ++AC+Q L+ R IH ++ R + + + +LI++Y +CG + +A +V
Sbjct: 49 PTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKV 108
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV 233
F++M+++D+ ++ SLIAG A + EA+ + M+ +P TF +L A G
Sbjct: 109 FDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAA--GAYA 166
Query: 234 DLG 236
D G
Sbjct: 167 DSG 169
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/523 (37%), Positives = 312/523 (59%), Gaps = 37/523 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEM----------------- 44
G++IHG+++ L + L +Y KCG A LFD M
Sbjct: 174 GKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQ 233
Query: 45 ---PE-CN-------------DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAM 87
PE C D V + +++ Y + G ++ A + F +K KD VCWT M
Sbjct: 234 NGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTM 293
Query: 88 IDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRI 147
+ G +NG+ AL LFREM +NVRP+ TI V+S+C++L +L G+ +H +
Sbjct: 294 MVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGV 353
Query: 148 DLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
D + +V AL++MYS+CG+ A VF+ M R+V ++NS+I G A +G+ +EA+ ++ E
Sbjct: 354 DHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEE 413
Query: 208 MINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
M+++ ++P +TFVGVL+AC H GLV+ G F S+++ +G+ P +HY C+++LL R G
Sbjct: 414 MLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAG 473
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSN 327
++A D I +M P+ ++ +LLS C+I+ + GE A+ L + ++G Y++LSN
Sbjct: 474 YMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLSN 533
Query: 328 AYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQE 387
YA+ G+WK+ +R+ MK ++K S IE++N++H+F+ D H + EQIY+++
Sbjct: 534 IYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEELNR 593
Query: 388 LKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPY--TTIRVVKNL 445
L + ++ G++P T +VLHD+ + EK ++ HSE+LA+ + LI KP+ T IR++KN+
Sbjct: 594 LIKKLQESGFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIK-KPHGRTPIRIMKNI 652
Query: 446 RVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
RVC DCH +K ++ I +R II+RD NRFHHF G CSC D W
Sbjct: 653 RVCGDCHVFMKFVSKIIRRPIILRDINRFHHFIEGRCSCKDSW 695
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 148/288 (51%), Gaps = 9/288 (3%)
Query: 23 KLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTV 82
+L+ LY K G DA LFD+M DV + M++ Y + G VE+ VF ++ V D V
Sbjct: 63 RLLHLYAKSGNLSDARDLFDKMSR-RDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAV 121
Query: 83 CWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM 142
+ +I G NG ++AL+ F MQ + + T V VL ACSQL ++ G+ IH +
Sbjct: 122 SYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRI 181
Query: 143 GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAV 202
+ + V AL NMY++CG +D+A +F+ M ++V ++NS+I+G +G+
Sbjct: 182 VATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCT 241
Query: 203 EMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDL 262
++F EM + G+ P +VT +L+A G +D + F+ + + GC
Sbjct: 242 KLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGC---- 297
Query: 263 LSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQI 307
++ G+ E+A M + PD+ + S++S+C L G+ +
Sbjct: 298 -AQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAV 344
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 34/192 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ +HG+ + G+ + LV++Y KCGE D
Sbjct: 340 QGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETAD------------------------ 375
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
A+ VF R+ ++ + W +MI G +NG+ AL L+ EM +N++P+ +T V
Sbjct: 376 --------AWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFV 427
Query: 121 CVLSACSQLGALELGR-WIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
VLSAC G +E G+ + +S H ++ +IN+ R G +DKA+ + + M
Sbjct: 428 GVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTF 487
Query: 179 ERDVTTYNSLIA 190
E + +++L++
Sbjct: 488 EPNCLIWSTLLS 499
>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
Length = 635
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/490 (40%), Positives = 285/490 (58%), Gaps = 38/490 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GRE+H V++ G+ ++ L ++Y KCG
Sbjct: 181 GRELHCHVVRRGIDADAVVWSALADMYAKCGR---------------------------- 212
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLV---RNGEMARALDLFREMQRDNVRPNEVT 118
V++A VF R+ V+D V WTAM++ R+GE R LF M R ++PNE T
Sbjct: 213 ----VDDARSVFDRMPVRDVVSWTAMVERYFDARRDGEGFR---LFVRMLRSGIQPNEFT 265
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
VL AC++ + +LG+ +H M K R + AL++MYS+ GD+ A++VF M
Sbjct: 266 YAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGMP 325
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
+ D+ ++ ++I+G A +G+ EA+ F ++ G RP VTFVGVL+AC+H GLVD G
Sbjct: 326 KLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGLS 385
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
IF S+ +YGIE +HY C++DLLSR G E A + I M + P+ + SLL C+IH
Sbjct: 386 IFHSIKDEYGIEHTADHYACVIDLLSRSGLFERAEEMINTMSVKPNKFLWASLLGGCRIH 445
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
++L A+ L + + TYV L+N YAS G + E R M+ G+ K P S
Sbjct: 446 KNVRLARWAAEALFEIEPENPATYVTLANIYASVGLFDEVENTRRIMELKGITKMPASSW 505
Query: 359 IEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALA 418
IEV +H F++GD HPQ EQ+Y +++L ++ EGY T VLHD+ED +K+ +
Sbjct: 506 IEVGTRMHVFLVGDKLHPQAEQVYALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIG 565
Query: 419 IHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFE 478
HSERLA+ +G+I+T I+V KNLR+C DCH+ IKLI+ I +R+IIVRD NRFHHF+
Sbjct: 566 YHSERLAVAFGIIATPKGAPIKVFKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFK 625
Query: 479 NGTCSCGDYW 488
NG+CSC DYW
Sbjct: 626 NGSCSCRDYW 635
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 186/433 (42%), Gaps = 56/433 (12%)
Query: 14 LRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVF 73
L SNR L L DA+ L +P + +T++ + +A +F
Sbjct: 61 LLSNRILHL----LSSHPATLPDALALLSSLPSTDVCSYNTLVAALGRSPRGLASARALF 116
Query: 74 SRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP---NEVTIVCVLSACSQLG 130
R+ +D W+A++ R+G+ AL ++R M R+ NE T L+A +
Sbjct: 117 DRMPRRDHFSWSAIVSAHARHGQPRAALAIYRRMLREPGSAGVDNEFTASSALAAATAAR 176
Query: 131 ALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIA 190
GR +H ++ + ID + +V AL +MY++CG +D A VF+ M RDV ++ +++
Sbjct: 177 CARAGRELHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVE 236
Query: 191 GLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR----- 245
R E +F M+ GI+P + T+ GVL AC+ LG ++ MT+
Sbjct: 237 RYFDARRDGEGFRLFVRMLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMTKSRAGD 296
Query: 246 ----------------DYGIEPQIEHYGCIVDLLS---------RVGRPEEA---YDFIT 277
D G ++ +DL+S + G+P+EA +D +
Sbjct: 297 SCFAESALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEALRYFDMLL 356
Query: 278 NMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSAD--SGTYVLLSNAYASSGKW 335
PDH+ +LSAC G + G I + D + + Y + + + SG +
Sbjct: 357 RSGCRPDHVTFVGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVIDLLSRSGLF 416
Query: 336 KEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLE 395
+ A ++ M S++ N + +LG R + ++ + E + ++E
Sbjct: 417 ERAEEMINTM------------SVKPNKFLWASLLGGCRIHKNVRLARWAAE--ALFEIE 462
Query: 396 GYSPSTEVVLHDI 408
+P+T V L +I
Sbjct: 463 PENPATYVTLANI 475
>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Glycine max]
Length = 676
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/488 (38%), Positives = 300/488 (61%), Gaps = 34/488 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ IHG V+K GL S +++ L+ +Y +C
Sbjct: 222 GQLIHGLVVKSGLESVVASQTSLLTMYSRCN----------------------------- 252
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++E++ +VF+++ + V WT+ + GLV+NG A+ +FREM R ++ PN T+
Sbjct: 253 ---MIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSS 309
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L ACS L LE+G IH+ K +D N G ALIN+Y +CG++DKA VF+ + E D
Sbjct: 310 ILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELD 369
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V NS+I A +G EA+E+F + N G+ P VTF+ +L AC++ GLV+ G +IF
Sbjct: 370 VVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFA 429
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
S+ ++ IE I+H+ C++DLL R R EEA I ++ PD ++ +LL++CKIHG++
Sbjct: 430 SIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVR-NPDVVLWRTLLNSCKIHGEV 488
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++ E++ ++L+ D GT++LL+N YAS+GKW + +++++ +++ ++K P S ++V
Sbjct: 489 EMAEKVMSKILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRDLKLKKSPAMSWVDV 548
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ E+H F+ GD+ HP+ +I++ + L + VK GY+P+T VL D+++ +K +L HS
Sbjct: 549 DREVHTFMAGDLSHPRSLEIFEMLHGLMKKVKTLGYNPNTRFVLQDLDEEKKISSLYYHS 608
Query: 422 ERLAICYGLIST-KPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
E+LAI Y L T TTIR+ KNLRVC DCHS IK ++ +T R II RD RFHHF+ G
Sbjct: 609 EKLAIAYALWKTIGRTTTIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARDSKRFHHFKGG 668
Query: 481 TCSCGDYW 488
CSC DYW
Sbjct: 669 LCSCKDYW 676
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 158/305 (51%), Gaps = 9/305 (2%)
Query: 46 ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
E D ++ +++ Y + + +A VF RV KD V +TA+I G ++G AL +F
Sbjct: 133 EVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFE 192
Query: 106 EMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG 165
+M V+PNE T+ C+L C LG L G+ IH + K ++ +L+ MYSRC
Sbjct: 193 DMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCN 252
Query: 166 DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
I+ +++VF ++ + T+ S + GL +GR AV +FREMI I P T +L
Sbjct: 253 MIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQ 312
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIA 282
ACS ++++G +I ++T G++ +++L + G ++A +D +T +
Sbjct: 313 ACSSLAMLEVGEQI-HAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTEL--- 368
Query: 283 PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG-TYVLLSNAYASSGKWKEAVQI 341
D + + S++ A +G ++ +RL + +G T++ + A ++G +E QI
Sbjct: 369 -DVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQI 427
Query: 342 RAKMK 346
A ++
Sbjct: 428 FASIR 432
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 144/339 (42%), Gaps = 67/339 (19%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
R +H V+K G S KL++ Y KCG +A +LFDE+P
Sbjct: 21 RAVHTNVIKSGF-SYSFLGHKLIDGYIKCGSLAEARKLFDELPS---------------- 63
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
+ V W +MI + +G+ A++ + M + V P+ T +
Sbjct: 64 ----------------RHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAI 107
Query: 123 LSACSQLGALELGRWIHSYMGKHRID-LNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
A SQLG + G+ H ++ L+ V AL++MY++ + A VF + E+D
Sbjct: 108 SKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKD 167
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HG 230
V + +LI G A HG EA+++F +M+N+G++P + T +L C HG
Sbjct: 168 VVLFTALIVGYAQHGLDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHG 227
Query: 231 GLVDLGFE--------IFQSMTRDYGIEPQIEHYG-----------CIVDLLSRVGRPEE 271
+V G E + +R IE I+ + V L + GR E
Sbjct: 228 LVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEV 287
Query: 272 AYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQI 307
A M I+P+ L S+L AC L++GEQI
Sbjct: 288 AVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQI 326
>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 693
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/487 (39%), Positives = 280/487 (57%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIHG +++ GL S+ L+++YGKCG
Sbjct: 239 GKEIHGHIVRAGLDSDEVLWSSLMDMYGKCG----------------------------- 269
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ A +F ++ KD V WT+MID ++ LF E+ RPNE T
Sbjct: 270 ---CIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSG 326
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL+AC+ L ELGR +H YM + D +LI+MY++CG+I+ A V + + D
Sbjct: 327 VLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPD 386
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ + SLI G A +G+ EA++ F ++ G +P VTFV VL+AC+H GLV+ G E F
Sbjct: 387 LVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFY 446
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
S+T + + +HY C+VDLL+R GR E+ ++ M + P + S+L C +G +
Sbjct: 447 SITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYGNI 506
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
L E+ A+ L + TYV ++N YA++GKW+E ++R +M+E G+ K+PG S E+
Sbjct: 507 DLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGITKKPGSSWTEI 566
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ H FI D HP QI + + EL++ +K EGY P+T +VLHD+ED +KE L HS
Sbjct: 567 KRKRHVFIAADTSHPMYNQIIEFLGELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHS 626
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ + ++ST+ T I+V KNLR C DCHS IK I+ ITKRKI +RD RFH FENG
Sbjct: 627 EKLAVAFAILSTEEGTAIKVFKNLRSCVDCHSAIKFISKITKRKITIRDSTRFHCFENGQ 686
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 687 CSCRDYW 693
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 117/271 (43%), Gaps = 19/271 (7%)
Query: 87 MIDGLVRNGEMARALDLF--REMQRDNV-------RPNEVTIVCVLSACSQLGALELGRW 137
+++ L R A+D+ +++ R+ V +P T ++ CSQ ALE G+
Sbjct: 49 VVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKK 108
Query: 138 IHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR 197
+H ++ ++ ++ MY++CG + A +VF+EM ERDV ++N ++ G A G
Sbjct: 109 VHEHIRTSGFVPGIVIWNRILGMYAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAEVGL 168
Query: 198 SIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQI---E 254
EA +F EM + ++ ++ + ++ M R +P I
Sbjct: 169 LEEARNLFDEMPER----DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVS 224
Query: 255 HYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC 314
+ + R +E + I + D ++ SL+ G + I +++D
Sbjct: 225 SAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIID- 283
Query: 315 RSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
D ++ + + Y S +W+E + +++
Sbjct: 284 --KDVVSWTSMIDRYFKSSRWREGFSLFSEL 312
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/520 (39%), Positives = 304/520 (58%), Gaps = 36/520 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINC-- 59
G ++H Q LK GL S+ L+ +YG+CG A ++FDEMP+ N V + V+ C
Sbjct: 292 GFQMHCQALKHGLDSHLFVATTLIGMYGECGCVGFARKVFDEMPQPNLVAWNAVVTACFR 351
Query: 60 ----------------------------YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGL 91
Y++ G +E A +FS + +D V W+ MI G
Sbjct: 352 GNDVSGAREIFDKMLVRNHTSWNVMLAGYIKAGELECAKRIFSEMPHRDDVSWSTMIVGF 411
Query: 92 VRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH 151
NG + FRE+ R +RPNEV++ VLSACSQ GA E G+ +H ++ K
Sbjct: 412 SHNGSFNESFSYFRELLRAEMRPNEVSLTGVLSACSQSGAFEFGKTLHGFVEKSGYSWIV 471
Query: 152 IVGGALINMYSRCGDIDKALQVFEEMKE-RDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
V ALI+MYSRCG++ A VFE M+E R + ++ S+IAGLAMHG EA+ +F EM
Sbjct: 472 SVNNALIDMYSRCGNVPMARLVFEGMQEKRSIVSWTSMIAGLAMHGHGEEAIRIFNEMTE 531
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
G+ P +++F+ +L ACSH GL+ G F M R Y IEP +EHYGC+VDL R G+ +
Sbjct: 532 SGVMPDEISFISLLYACSHAGLIKEGEGYFSKMKRVYHIEPAVEHYGCMVDLYGRSGKLQ 591
Query: 271 EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYA 330
+AY FI M I P I+ +LL AC HG ++L EQ+ +RL + +SG VLLSN YA
Sbjct: 592 KAYSFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNVYA 651
Query: 331 SSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQ 390
++GKWK+ IR M ++K S +EV +++F + + + ++K++E+
Sbjct: 652 TAGKWKDVASIRKSMIVQRIKKITAWSLVEVGKTMYKFTACEKKKEIDIEAHEKLKEI-- 709
Query: 391 IVKLE---GYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRV 447
I++L GY+P L+D+E+ EKE ++ HSE+LA+ + L IR+VKNLR+
Sbjct: 710 ILRLRDEAGYAPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLPKGANIRIVKNLRI 769
Query: 448 CNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDY 487
C DCH+++KL + + +I++RDRNRFH F++G+CSCGDY
Sbjct: 770 CRDCHAVMKLTSRVYGVEIVIRDRNRFHSFKDGSCSCGDY 809
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 100/232 (43%), Gaps = 13/232 (5%)
Query: 80 DTVCWTAMIDGLVRNGEMARALDLFREMQRDN-VRPNEVTIVCVLSACSQLGALELGRWI 138
D + ++ G + E ++ +F EM R + P+ + V+ A + +L G +
Sbjct: 236 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVVKAAANFRSLRTGFQM 295
Query: 139 HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRS 198
H KH +D + V LI MY CG + A +VF+EM + ++ +N+++
Sbjct: 296 HCQALKHGLDSHLFVATTLIGMYGECGCVGFARKVFDEMPQPNLVAWNAVVTACFRGNDV 355
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGC 258
A E+F +M+ + V G + A G ++ IF M + +
Sbjct: 356 SGAREIFDKMLVRNHTSWNVMLAGYIKA----GELECAKRIFSEMPHRDDVS-----WST 406
Query: 259 IVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQI 307
++ S G E++ + + ++ P+ + L +LSAC G + G+ +
Sbjct: 407 MIVGFSHNGSFNESFSYFRELLRAEMRPNEVSLTGVLSACSQSGAFEFGKTL 458
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/462 (41%), Positives = 277/462 (59%), Gaps = 2/462 (0%)
Query: 28 YGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAM 87
Y + G +DA LF+ MP+ + V A M+ + +HG+V+ A +F R+ +D W+AM
Sbjct: 246 YIQAGHVEDAEDLFNAMPD-HPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAM 304
Query: 88 IDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRI 147
I +N + AL FREM +RPN + + +L+ C+ L + GR +H+ M +
Sbjct: 305 IKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSF 364
Query: 148 DLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
D + ALI MY +CG++DKA +VF + +DV +NS+I G A HG EA+ +F +
Sbjct: 365 DTDVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDD 424
Query: 208 MINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
+ + P +T++GVL ACS+ G V G EIF SM + I HY C+VDLL R G
Sbjct: 425 LRLARMAPDGITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLGRAG 484
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSN 327
+EA D I NM + PD I+ G+L+ AC++H ++ E AK+LL+ +G YVLLS+
Sbjct: 485 LVDEALDLINNMPVEPDAIIWGALMGACRMHKNAEIAEVAAKKLLELEPGSAGPYVLLSH 544
Query: 328 AYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDI-RHPQREQIYKKMQ 386
Y S+G+W++A +R + + K PGCS IE N +H F GD+ HP+ I ++
Sbjct: 545 IYTSTGRWEDASDMRKFISSRNLNKSPGCSWIEYNKMVHLFTSGDVLSHPEHAIILNMLE 604
Query: 387 ELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLR 446
EL ++ GYS VLHD+++ +K +L HSER A+ YGL+ IRV+KNLR
Sbjct: 605 ELDGLLMESGYSADGSFVLHDVDEEQKAQSLRYHSERQAVAYGLLKVPAGMPIRVMKNLR 664
Query: 447 VCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
VC DCHS IKLI IT R+II+RD NRFHHF++G CSC DYW
Sbjct: 665 VCGDCHSAIKLITKITSREIILRDANRFHHFKDGLCSCRDYW 706
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 159/333 (47%), Gaps = 18/333 (5%)
Query: 17 NRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRV 76
N T L+ + G +A +LFDEMP+ DVVA T M++ Y + G + A +F +
Sbjct: 142 NHVTYTVLLGGFLDAGRVNEARKLFDEMPD-KDVVARTAMLSGYCQAGRITEARALFDEM 200
Query: 77 KVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGR 136
++ V WTAMI G +NG++ A LF M NEV+ +L Q G +E
Sbjct: 201 PKRNVVSWTAMISGYAQNGKVILARKLFEVMPDR----NEVSWTAMLVGYIQAGHVEDAE 256
Query: 137 WIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHG 196
+ + M H + A++ + + G +D A +FE M RD T++++I +
Sbjct: 257 DLFNAMPDHPV----AACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKVYEQNE 312
Query: 197 RSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHY 256
+EA+ FREM+ +GIRP +F+ +L C+ D G E+ +M R + +
Sbjct: 313 FLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELHAAMLR-CSFDTDVFAV 371
Query: 257 GCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRS 316
++ + + G ++A + NM D +M S+++ HG LGE+ D R
Sbjct: 372 SALITMYIKCGNLDKA-KRVFNMFEPKDVVMWNSMITGYAQHG---LGEEALGIFDDLRL 427
Query: 317 A----DSGTYVLLSNAYASSGKWKEAVQIRAKM 345
A D TY+ + A + +GK KE +I M
Sbjct: 428 ARMAPDGITYIGVLTACSYTGKVKEGREIFNSM 460
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 34/196 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GRE+H +L+ ++ L+ +Y KCG A ++F+ M E DVV MI Y
Sbjct: 352 GRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFN-MFEPKDVVMWNSMITGYA 410
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+HGL E AL +F +++ + P+ +T +
Sbjct: 411 QHGLGEE-------------------------------ALGIFDDLRLARMAPDGITYIG 439
Query: 122 VLSACSQLGALELGRWIHSYMGKH-RIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VL+ACS G ++ GR I + MG + I L ++++ R G +D+AL + M E
Sbjct: 440 VLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDLINNMPVE 499
Query: 180 RDVTTYNSLIAGLAMH 195
D + +L+ MH
Sbjct: 500 PDAIIWGALMGACRMH 515
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 21/184 (11%)
Query: 156 ALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRP 215
ALI Y R D AL +F M RD+ +YN+LIAGL++ ++ + + + + P
Sbjct: 53 ALIAGYFRNHLPDAALGLFHRMPSRDLGSYNALIAGLSLRRHTLP--DAAAALASIPLPP 110
Query: 216 TKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEH--YGCIVDLLSRVGRPEEA- 272
+ V+F +L GL+ +F M P+ H Y ++ GR EA
Sbjct: 111 SVVSFTSLLRGYVRHGLLADAIRLFHQM-------PERNHVTYTVLLGGFLDAGRVNEAR 163
Query: 273 --YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYA 330
+D + + + ML A +I L +++ KR + ++ + + YA
Sbjct: 164 KLFDEMPDKDVVARTAMLSGYCQAGRITEARALFDEMPKR-------NVVSWTAMISGYA 216
Query: 331 SSGK 334
+GK
Sbjct: 217 QNGK 220
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/487 (40%), Positives = 291/487 (59%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H ++L+ GL + L+++YGKCGE
Sbjct: 240 GLRVHARLLRGGLMFDEFVGSMLIDMYGKCGE---------------------------- 271
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
V NA VF ++ ++ V WTA++ ++NG +L+LF M R+ PNE T
Sbjct: 272 ----VLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAV 327
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+AC+ + AL G +H+ + K + IV ALINMYS+ G ID + VF +M RD
Sbjct: 328 LLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRD 387
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ T+N++I G + HG +A+++F++M++ P VTF+GVL+A SH GLV GF
Sbjct: 388 IITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLN 447
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+ R++ IEP +EHY C+V LLSR G +EA +F+ ++ D + +LL+AC +H
Sbjct: 448 HLMRNFKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNY 507
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
LG +IA+ +L D GTY LLSN YA + +W V IR M+E ++KEPG S +++
Sbjct: 508 DLGRRIAESVLQMDPHDVGTYTLLSNMYAKARRWDGVVTIRKLMRERNIKKEPGASWLDI 567
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N+IH F+ HP+ QIYKK+Q+L ++K GY P+ VLHD+ED +KE L+ HS
Sbjct: 568 RNDIHVFLSEGSNHPESIQIYKKVQQLLALIKPLGYVPNIASVLHDVEDEQKEGYLSYHS 627
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ YGL+ IR++KNLR+C+DCH+ +KLI+ +T R IIVRD NRFHHF +G+
Sbjct: 628 EKLALAYGLMKIPSPAPIRIIKNLRMCDDCHTAVKLISKVTNRLIIVRDANRFHHFRDGS 687
Query: 482 CSCGDYW 488
C+C D+W
Sbjct: 688 CTCLDHW 694
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 168/359 (46%), Gaps = 39/359 (10%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG + HG + K GL ++ + LV +Y +C + A+Q+ D +P
Sbjct: 135 EGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPG-------------- 180
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
EH V D + ++++ LV +G A+++ R M + V + VT V
Sbjct: 181 -EH--------------VNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYV 225
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+ C+Q+ L+LG +H+ + + + + VG LI+MY +CG++ A VF+ ++ R
Sbjct: 226 GVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNR 285
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+V + +L+ +G E++ +F M +G P + TF +LNAC+ + G ++
Sbjct: 286 NVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHG-DLL 344
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ G + + ++++ S+ G + +Y+ T+M I D I +++ HG
Sbjct: 345 HARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDM-IYRDIITWNAMICGYSHHG- 402
Query: 301 LQLGEQIAKRLLDCRSADSG----TYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
LG+Q + D SA+ T++ + +AY+ G KE + + EPG
Sbjct: 403 --LGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMR-NFKIEPG 458
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 113/251 (45%), Gaps = 39/251 (15%)
Query: 2 GREIHGQVLKLGLRSNRS--TRLK-LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMIN 58
G+ +H Q L SN S + L LV LY KCG+ A LFD MP
Sbjct: 31 GKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMP------------- 77
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPNEV 117
+++ V W ++ G + G L LF+ M N PNE
Sbjct: 78 -------------------LRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEY 118
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
LSACS G ++ G H + K + + V AL++MYSRC ++ ALQV + +
Sbjct: 119 VFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTV 178
Query: 178 KE---RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
D+ +YNS++ L GR EAVE+ R M+++ + VT+VGV+ C+ +
Sbjct: 179 PGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQ 238
Query: 235 LGFEIFQSMTR 245
LG + + R
Sbjct: 239 LGLRVHARLLR 249
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 121/258 (46%), Gaps = 12/258 (4%)
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYM-----GKHRIDLNHIVGGALINMYSRCGDID 168
P+ + +L C+ + L G+ +H+ + ++H+ +L+++Y +CG +
Sbjct: 10 PSLEELGKLLKLCADVKWLPFGKAMHAQFLIRNQTSNHSHISHL--NSLVHLYVKCGQLG 67
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN-QGIRPTKVTFVGVLNAC 227
A +F+ M R+V ++N L+AG G +E + +F+ M++ Q P + F L+AC
Sbjct: 68 LARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSAC 127
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM--KIAPDH 285
SHGG V G + + +G+ +V + SR E A + + + D
Sbjct: 128 SHGGRVKEGMQC-HGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDI 186
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRLLD-CRSADSGTYVLLSNAYASSGKWKEAVQIRAK 344
S+L+A G+ + ++ +R++D C + D TYV + A + +++ A+
Sbjct: 187 FSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHAR 246
Query: 345 MKEAGVQKEPGCSSIEVN 362
+ G+ + S+ ++
Sbjct: 247 LLRGGLMFDEFVGSMLID 264
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/488 (40%), Positives = 294/488 (60%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
GR IHG VL G S+ + L+ YGKC
Sbjct: 129 HGRIIHGHVLVNGFGSDVYVQTALMSFYGKC----------------------------- 159
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G++ NA +VF +++ + V W +MI G +NG A+ LF M+ V PN T V
Sbjct: 160 ---GVLCNARKVFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFV 216
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSAC+ LGA LG W+H Y + +DLN ++G +LINMY+RCG++ KA +VF+ MKER
Sbjct: 217 SVLSACAHLGAFILGCWVHEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMKER 276
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+V + ++I+G +G +AVE+F EM G+ P +TFV VL+AC+H GLV+ G +F
Sbjct: 277 NVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLLPNSITFVAVLSACAHAGLVNEGRRVF 336
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+SM +Y + P++EH+ C+VD+L R G +EAY+FI + P + ++L ACK+H
Sbjct: 337 ESMREEYRLVPEVEHHVCLVDMLGRAGLLDEAYNFIKEIHEEPAPAIWTAMLGACKMHKN 396
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
LG Q+A+ L + YV+LSN YA +G+ + +R M ++K+ G S+I+
Sbjct: 397 FGLGAQVAEHRLASEPGNPAHYVILSNIYALAGRMDQVEMVRDNMIRKCLKKQVGYSTID 456
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
++ + + F +GD H + +IY + +L + + GY ++ V+H++E+ E+E+AL H
Sbjct: 457 LDRKTYLFSMGDKSHTETNEIYHYLDQLMRKCREAGYVTVSDSVMHELEEEEREYALGYH 516
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI +GL+ T T IR+VKNLR+C DCHS IK I+ I+ R+IIVRD+ RFHHF+NG
Sbjct: 517 SEKLAIAFGLLKTSRGTVIRIVKNLRMCEDCHSAIKYISVISNREIIVRDKLRFHHFKNG 576
Query: 481 TCSCGDYW 488
+CSC DYW
Sbjct: 577 SCSCLDYW 584
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 148/299 (49%), Gaps = 10/299 (3%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMA-RALDLFREMQRDNV 112
T ++N G + ++F V D+ +T++I + + +L + M NV
Sbjct: 48 TKLLNLACAAGSISYTRQIFLIVPNPDSFLFTSLIRSTSKFHNFSVYSLYFYTRMVLSNV 107
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
P+ T V+ +C+ L AL GR IH ++ + + V AL++ Y +CG + A +
Sbjct: 108 APSNYTFTSVIKSCADLVALRHGRIIHGHVLVNGFGSDVYVQTALMSFYGKCGVLCNARK 167
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
VF++M++R V T+NS+I+G +G + EA+ +F M G+ P TFV VL+AC+H G
Sbjct: 168 VFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGA 227
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
LG + + + G++ + ++++ +R G +A + +MK + + +++
Sbjct: 228 FILGCWVHEYAVGN-GLDLNVVLGTSLINMYTRCGNVSKAREVFDSMK-ERNVVAWTAMI 285
Query: 293 SACKIHGKLQLGEQIAKRLLDCRS----ADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
S +G G Q + + R +S T+V + +A A +G E ++ M+E
Sbjct: 286 SG---YGTNGYGSQAVELFHEMRRNGLLPNSITFVAVLSACAHAGLVNEGRRVFESMRE 341
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/491 (39%), Positives = 298/491 (60%), Gaps = 4/491 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMI 57
E +I+ Q+ K + + L L++ G K + + M + DV+ T ++
Sbjct: 189 EAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLV 248
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y ++G +E A VF R+ K+ + W+A+I G +NG AL L +MQ +P+ V
Sbjct: 249 DMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSV 308
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
++V VL ACSQ+G L+LG+ +H Y+ + R+ + + A+I+MYS+CG + A VF+++
Sbjct: 309 SLVSVLLACSQVGFLKLGKSVHGYIVR-RLHFDCVSSTAVIDMYSKCGSLSFARTVFDQI 367
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
RD ++N++IA +HG EA+ +F +M ++P TF +L+A SH GLV+ G
Sbjct: 368 SFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGR 427
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F M +Y I+P +HY C+VDLLSR GR EEA + I +M P + +LLS C
Sbjct: 428 YWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLN 487
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
HGK +GE AK++L+ D G Y L+SN +A++ +W E ++R MK+ G++K PG S
Sbjct: 488 HGKFLIGEMAAKKVLELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYS 547
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
+EVN ++H F++ D H Q E+I + + +L +K GY P TE VLH++E+ KE L
Sbjct: 548 VMEVNGKLHAFLMEDKSHHQYEEIMQVLGKLDYEMKAMGYVPKTEFVLHNLEEEVKERML 607
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSERLAI +GL++T P T + + KNLRVC DCH K I+ I R+I+VRD RFHHF
Sbjct: 608 CNHSERLAIAFGLLNTGPGTRLLITKNLRVCGDCHEATKFISKIVNREIVVRDVKRFHHF 667
Query: 478 ENGTCSCGDYW 488
++G CSCGDYW
Sbjct: 668 KDGVCSCGDYW 678
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 156/295 (52%), Gaps = 20/295 (6%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+DV ++N Y + G ++ A VF ++ +D VCWT MI GL +NG+ A+D++R+M
Sbjct: 138 DDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQM 197
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ V + V ++ ++ AC+ LG ++G IH YM + I ++ IV +L++MY++ G +
Sbjct: 198 HKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHL 257
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+ A VF M ++V ++++LI+G A +G + A+++ +M + G +P V+ V VL AC
Sbjct: 258 ELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLAC 317
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGC-----IVDLLSRVGRPEEAYDFITNMKIA 282
S G + LG + + R H+ C ++D+ S+ G A +
Sbjct: 318 SQVGFLKLGKSVHGYIVRRL-------HFDCVSSTAVIDMYSKCGSLSFARTVFDQISF- 369
Query: 283 PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSA----DSGTYVLLSNAYASSG 333
D I +++++ IHG GE+ L R D T+ L +A++ SG
Sbjct: 370 RDSISWNAIIASYGIHGS---GEEALSLFLQMRETNVKPDHATFASLLSAFSHSG 421
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 177/416 (42%), Gaps = 100/416 (24%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
+IH ++ G+ + ++ KL++ Y + G + A Q+FD+ P+C
Sbjct: 25 KIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCG--------------- 69
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
W AMI R G M AL L+ M + VRP+ T VL
Sbjct: 70 -----------------VDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPDSSTYTVVL 112
Query: 124 SACSQLGALELGR--WIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
AC++ L G W + + D+ VG A++N+Y++CG +D+A++VF++M RD
Sbjct: 113 KACTRSLDLRSGEETWRQAVDQGYGDDV--FVGAAVLNLYAKCGKMDEAMRVFDKMGRRD 170
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ + ++I GLA +G++ EAV+++R+M + + V +G++ AC+ G +G I
Sbjct: 171 LVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHG 230
Query: 242 SMTRD---------------YGIEPQIEHYGCI---------------VDLLSRVGRPEE 271
M R Y +E C+ + ++ G
Sbjct: 231 YMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGN 290
Query: 272 AYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQ----IAKRL-LDCRSA------ 317
A + +M+ PD + L S+L AC G L+LG+ I +RL DC S+
Sbjct: 291 ALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRRLHFDCVSSTAVIDM 350
Query: 318 --------------------DSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
DS ++ + +Y G +EA+ + +M+E V+ +
Sbjct: 351 YSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPD 406
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/490 (41%), Positives = 295/490 (60%), Gaps = 36/490 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H +++ G + + S L++ YGKCG D+V++ +
Sbjct: 228 GRQLHAFIVRCGYKEDVSVANGLIDFYGKCG----------------DIVSAEM------ 265
Query: 62 EHGLVENAFEVFSRV-KVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
VF+R+ K+ V W +M+ LV+N E RA +F + R V P + I
Sbjct: 266 ----------VFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQ-ARKEVEPTDFMIS 314
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSAC++LG LELGR +H+ K ++ N VG AL++MY +CG I+ A QVF E+ ER
Sbjct: 315 SVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPER 374
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMI--NQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
++ T+N++I G A G A+ +F EM + GIRP+ VT + +L+ CS G V+ G +
Sbjct: 375 NLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQ 434
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
IF+SM +YGIEP EH+ C+VDLL R G + AY+FI NM I P + G+LL AC++H
Sbjct: 435 IFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMH 494
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
GK +LG+ A++L + DSG +V+LSN AS+G+W+EA +R +MK+ G++K G S
Sbjct: 495 GKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSW 554
Query: 359 IEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALA 418
I V N IH F D H + +I + +L+ +K GY P T + L D+ED EK +
Sbjct: 555 IAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNLSLFDLEDEEKASEVW 614
Query: 419 IHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFE 478
HSE++A+ +GLI+ IR+ KNLR+C DCHS IK I+ I R+IIVRD +RFH F+
Sbjct: 615 YHSEKIALAFGLIALPQGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFK 674
Query: 479 NGTCSCGDYW 488
+G CSC DYW
Sbjct: 675 DGCCSCKDYW 684
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 149/329 (45%), Gaps = 34/329 (10%)
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
S ++N Y + L+ +A V S ++ V WT++I G V N AL F M+RDNV
Sbjct: 45 SNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNV 104
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
+PN+ T CV A + + G+ IH K + + VG + +MY + G A
Sbjct: 105 QPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACN 164
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
+F+EM +R++ T+N+ I+ RS++A+ F+E + P +TF LNAC
Sbjct: 165 MFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVR 224
Query: 233 VDLGFEIFQSMTR-----DYGI-EPQIEHYGCIVDLLS------RVGRPEEAYDFITNM- 279
++LG ++ + R D + I+ YG D++S R+G + + + +
Sbjct: 225 LNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLA 284
Query: 280 --------------------KIAPDHIMLGSLLSACKIHGKLQLGEQI-AKRLLDCRSAD 318
++ P M+ S+LSAC G L+LG + A + C +
Sbjct: 285 ALVQNHEEERACMVFLQARKEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDN 344
Query: 319 SGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
L + Y G + A Q+ +++ E
Sbjct: 345 IFVGSALVDMYGKCGSIENAEQVFSELPE 373
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 137/347 (39%), Gaps = 71/347 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G++IHG LK G+ + ++Y K G DA +FDEMP+
Sbjct: 127 GKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQ--------------- 171
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ W A I V++ A+ F+E + PN +T
Sbjct: 172 -----------------RNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCA 214
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER- 180
L+AC + L LGR +H+++ + + V LI+ Y +CGDI A VF + R
Sbjct: 215 FLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRK 274
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+V ++ S++A L + A +F + + + PT VL+AC+ G ++LG +
Sbjct: 275 NVVSWCSMLAALVQNHEEERACMVFLQA-RKEVEPTDFMISSVLSACAELGGLELGRSV- 332
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK-------------------- 280
++ +E I +VD+ + G E A + +
Sbjct: 333 HALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDI 392
Query: 281 ----------------IAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
I P ++ L S+LS C G ++ G QI + +
Sbjct: 393 DMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESM 439
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Query: 111 NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGK-HRIDLNHIVGGALINMYSRCGDIDK 169
N+ P + + SA S ++ LGR IH+++ + H L + L+NMYS+ ++
Sbjct: 2 NIHPQNLLGSLLESAVSTHCSI-LGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNS 60
Query: 170 ALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
A V R V T+ SLI+G + R + A+ F M ++P TF V A
Sbjct: 61 AQHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKA 117
>gi|115470991|ref|NP_001059094.1| Os07g0191500 [Oryza sativa Japonica Group]
gi|34394559|dbj|BAC83863.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510108|dbj|BAD30876.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610630|dbj|BAF21008.1| Os07g0191500 [Oryza sativa Japonica Group]
Length = 550
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/501 (41%), Positives = 296/501 (59%), Gaps = 44/501 (8%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR++H KLGL + + VVA++ +++ Y
Sbjct: 81 EGRQLHALAAKLGLAPSHT------------------------------VVANS-LLHLY 109
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN-VRPNEVTI 119
GL A ++F R+ + V W +D LV NG+ ALDLFREMQRD + P+ T+
Sbjct: 110 SSCGLPGAALDLFRRIPDRSLVSWNTAVDALVGNGDHLAALDLFREMQRDTELAPDAYTV 169
Query: 120 VCVLSACSQLGALELGRWIHSYMGKH--------RIDLNHIVGGALINMYSRCGDIDKAL 171
VL AC+ GAL LG + H+ + + + + ++ +L+++Y +CG ++ A
Sbjct: 170 QSVLGACAGAGALSLGVYAHALLLRELGGDGDGEAVSRDMLINNSLVDLYGKCGALELAQ 229
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN-QGIRPTKVTFVGVLNACSHG 230
QVF+ M RD+ ++N +I LA HGR E+VE+F M + + P +TFV VL+AC+HG
Sbjct: 230 QVFDRMPARDLASWNVMILTLANHGRVCESVELFDRMTQVEKMAPNAITFVAVLSACNHG 289
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGS 290
GLV+ G F M Y I+P+IEHYGC+VDLL+R G EEA D + M PD I+ S
Sbjct: 290 GLVEEGRRYFAMMVDQYRIKPRIEHYGCMVDLLARAGFIEEALDIVAGMNCRPDAIIWRS 349
Query: 291 LLSAC-KIHGKLQLGEQIAKRLLDCRS-ADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
LL AC K + L+L E +AK L+ A SG YVLLS YAS+ +W + +R M E
Sbjct: 350 LLDACCKKNAGLELTEAMAKLALEVPDDAVSGVYVLLSRVYASAQRWNDVGMVRRLMVEE 409
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPS-TEVVLHD 407
GV+KEPG SSIE++ +H+F+ GD HPQ E IY+K+ E++ + GY P +E L
Sbjct: 410 GVKKEPGFSSIEMDGLVHQFVAGDTSHPQSEAIYEKLDEIQLKLTSAGYKPDLSEAPLVA 469
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
D K AL +HSERLAI +GL++ P IR++KNLRVC DCH++ KLI+ + +II
Sbjct: 470 SIDNAKGAALRLHSERLAISFGLLNATPGAPIRILKNLRVCKDCHTISKLISKLYGVEII 529
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
VRDR RFHHF++G+CSC DYW
Sbjct: 530 VRDRIRFHHFKDGSCSCKDYW 550
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 122/267 (45%), Gaps = 46/267 (17%)
Query: 93 RNGEMA-RALDLFREMQR-DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLN 150
R ++A RAL LFR +Q + P V++ VLSA + L AL GR +H+ K + +
Sbjct: 38 RRADLAHRALLLFRSLQSTPSPPPPHVSLPAVLSAAAFLSALPEGRQLHALAAKLGLAPS 97
Query: 151 H-IVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
H +V +L+++YS CG AL +F + +R + ++N+ + L +G + A+++FREM
Sbjct: 98 HTVVANSLLHLYSSCGLPGAALDLFRRIPDRSLVSWNTAVDALVGNGDHLAALDLFREMQ 157
Query: 210 -NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYG-------CIVD 261
+ + P T VL AC+ G + LG + R+ G + E +VD
Sbjct: 158 RDTELAPDAYTVQSVLGACAGAGALSLGVYAHALLLRELGGDGDGEAVSRDMLINNSLVD 217
Query: 262 LLSRVGRPE----------------------------------EAYDFITNM-KIAPDHI 286
L + G E E +D +T + K+AP+ I
Sbjct: 218 LYGKCGALELAQQVFDRMPARDLASWNVMILTLANHGRVCESVELFDRMTQVEKMAPNAI 277
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLD 313
++LSAC G ++ G + ++D
Sbjct: 278 TFVAVLSACNHGGLVEEGRRYFAMMVD 304
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/489 (40%), Positives = 300/489 (61%), Gaps = 20/489 (4%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++HG VLK G S+ R LVE+Y KCG A + ++P DV+
Sbjct: 541 GRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPL--DVLRKG------- 591
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
NA + K V W +M+ G V NG+ L FR M R+ V + T+
Sbjct: 592 ------NARVSYKEPKA-GIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTT 644
Query: 122 VLSACSQLGALELGRWIHSYMGK--HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
++SAC+ G LE GR +H+Y+ K HRID VG +LI+MYS+ G +D A VF + E
Sbjct: 645 IISACANAGILEFGRHVHAYVQKIGHRIDA--YVGSSLIDMYSKSGSLDDAWMVFRQSNE 702
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
++ + S+I+G A+HG+ + A+ +F EM+NQGI P +VTF+GVLNACSH GL++ G
Sbjct: 703 PNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRY 762
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F+ M Y I P +EH +VDL R G + +FI I+ + S LS+C++H
Sbjct: 763 FRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHLTSVWKSFLSSCRLHK 822
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+++G+ +++ LL +D G YVLLSN AS+ +W EA ++R+ M + GV+K+PG S I
Sbjct: 823 NVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGVKKQPGQSWI 882
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
++ ++IH F++GD HPQ ++IY + L +K GYS ++V+ D+E+ + E ++
Sbjct: 883 QLKDQIHTFVMGDRSHPQDDEIYSYLDILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISH 942
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LA+ +G+I+T T IR++KNLR+C DCH+ IK + + R+IIVRD +RFHHF++
Sbjct: 943 HSEKLAVVFGIINTANRTPIRIIKNLRICTDCHNFIKYASQLLDREIIVRDIHRFHHFKH 1002
Query: 480 GTCSCGDYW 488
G+CSCGDYW
Sbjct: 1003 GSCSCGDYW 1011
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 181/366 (49%), Gaps = 24/366 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H +L+ G+ + +++LY KC F+ A +LF+ M E DVV+ +MI Y+
Sbjct: 409 GKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNE-GDVVSWNIMIGAYL 467
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G VE + ++F R+ KD V W ++DGL++ G AL+ M + VT
Sbjct: 468 RAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSI 527
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA--------LQV 173
L S L +ELGR +H + K D + + +L+ MY +CG +DKA L V
Sbjct: 528 ALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDV 587
Query: 174 FEEMKER--------DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
+ R + ++ S+++G +G+ + ++ FR M+ + + T +++
Sbjct: 588 LRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIIS 647
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHY--GCIVDLLSRVGRPEEAYDFITNMKIAP 283
AC++ G+++ G + + + I +I+ Y ++D+ S+ G ++A+ + P
Sbjct: 648 ACANAGILEFGRHVHAYVQK---IGHRIDAYVGSSLIDMYSKSGSLDDAW-MVFRQSNEP 703
Query: 284 DHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNAYASSGKWKEAVQIR 342
+ +M S++S +HG+ + + +L+ + T++ + NA + +G +E +
Sbjct: 704 NIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYF 763
Query: 343 AKMKEA 348
MK+A
Sbjct: 764 RMMKDA 769
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 127/299 (42%), Gaps = 64/299 (21%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
+H +K G + L+ LY K A +LFDE+P+
Sbjct: 311 LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQ------------------ 352
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
++T WT +I G R G +LFREMQ PN+ T+ VL
Sbjct: 353 --------------RNTQTWTILISGFARAGSSEMVFNLFREMQAKGACPNQYTLSSVLK 398
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC-------------------- 164
CS L+LG+ +H++M ++ ID++ ++G +++++Y +C
Sbjct: 399 CCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVVS 458
Query: 165 -----------GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGI 213
GD++K+L +F + +DV ++N+++ GL G A+E M+ G
Sbjct: 459 WNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGT 518
Query: 214 RPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
+ VTF L S V+LG ++ M +G + +V++ + GR ++A
Sbjct: 519 EFSAVTFSIALILASSLSHVELGRQL-HGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKA 576
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/436 (43%), Positives = 273/436 (62%), Gaps = 1/436 (0%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
T ++ Y + G E A +F + KD V W+AM+ + G+ A ++F +M ++
Sbjct: 439 TALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMK 498
Query: 114 PNEVTIVCVLSAC-SQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
PNE TI + AC S ++ GR H+ K+R VG AL+ MY+R G ID A
Sbjct: 499 PNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARI 558
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
VFE +RD+ ++NS+I+G A HG S EA++ FR+M GI TF+ V+ C+H GL
Sbjct: 559 VFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGL 618
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
V G + F SM D+ I P +EHY C+VDL SR G+ +E + I M ++ +LL
Sbjct: 619 VKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLL 678
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
AC++H ++LG+ A++LL DS TYVLLSN YA++G+WKE ++R M V+K
Sbjct: 679 GACRVHKNVELGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKK 738
Query: 353 EPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE 412
E GCS I++ N++H FI D HP EQIY K++ + +K EGY P+T VVLHDI + +
Sbjct: 739 EAGCSWIQIKNKVHSFIACDKSHPLSEQIYAKLKAMTTRLKQEGYCPNTSVVLHDIAEEQ 798
Query: 413 KEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRN 472
KE L +HSERLA+ +GLI+T P T +++VKNLRVC DCH ++K+++ I R+II+RD +
Sbjct: 799 KETMLVMHSERLALAFGLIATPPRTPLQIVKNLRVCGDCHMVMKMVSLIEDREIIMRDCS 858
Query: 473 RFHHFENGTCSCGDYW 488
RFHHF G CSCGD+W
Sbjct: 859 RFHHFNAGACSCGDFW 874
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 156/305 (51%), Gaps = 14/305 (4%)
Query: 8 QVLKL-GLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLV 66
+VLK+ GL +R + +L L KCG FD +V T +++ Y++ G V
Sbjct: 104 RVLKVCGLIPDRVSGEQLHCLCVKCG--------FDRA----EVGVGTALVDMYMKCGGV 151
Query: 67 ENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSAC 126
E+ VF + ++ V WT+++ G V+ + + LF M+ + V PN T VLSA
Sbjct: 152 EDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAV 211
Query: 127 SQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYN 186
+ GA++LGR +H+ K V +LINMYS+CG +++A VF +M+ RD+ ++N
Sbjct: 212 ASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWN 271
Query: 187 SLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRD 246
+L+AGL ++ +EA+++F + + ++ T+ V+ C++ + L ++ S
Sbjct: 272 TLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQL-HSCVLK 330
Query: 247 YGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQ 306
+G I+D S+ G ++A++ M + + + +++ C + + L
Sbjct: 331 HGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAA 390
Query: 307 IAKRL 311
+ R+
Sbjct: 391 LFSRM 395
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 120/272 (44%), Gaps = 38/272 (13%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H Q +K G RS L+ +Y KCG
Sbjct: 220 GRRVHAQSVKFGCRSTVFVCNSLINMYSKCG----------------------------- 250
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
LVE A VF +++ +D V W ++ GL+ N AL LF + + + ++ T
Sbjct: 251 ---LVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYST 307
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-ER 180
V+ C+ L L L R +HS + KH + V A+++ YS+CG++D A +F M +
Sbjct: 308 VIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQ 367
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+V ++ ++I G + A +F M ++P + T+ VL A L + +I
Sbjct: 368 NVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPILLPQIHAQII 427
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
++ +Y P + ++ S++G EEA
Sbjct: 428 KT---NYQHAPSVG--TALLASYSKLGNTEEA 454
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Query: 50 VVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
+ + ++ Y G +++A VF R +D V W +MI G ++G ALD FR+M+
Sbjct: 537 ICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMET 596
Query: 110 DNVRPNEVTIVCVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ + T + V+ C+ G ++ G ++ S + H I ++++YSR G +D
Sbjct: 597 VGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLD 656
Query: 169 KALQVFEEM 177
+ + + E M
Sbjct: 657 ETMNLIEGM 665
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/487 (41%), Positives = 282/487 (57%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +IH V+K+GL N L+++Y KCG
Sbjct: 366 GNQIHCHVVKVGLDMNVFVSNALMDMYAKCGR---------------------------- 397
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+EN+ ++FS V W +I G V+ G +AL LF++M V+ EVT
Sbjct: 398 ----MENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSS 453
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL AC+ + ALE G IHS K D N +VG ALI+MY++CG+I A VF+ ++E D
Sbjct: 454 VLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHD 513
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
++N++I+G ++HG EA++ F M+ +P KVTFVG+L+ACS+ GL+D G F+
Sbjct: 514 QVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFK 573
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM +Y IEP EHY C+V LL R G ++A + + P ++ +LLSAC IH +
Sbjct: 574 SMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDV 633
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LG A+R+L+ D T+VLLSN YA++ +W IR MK G++KEPG S IE
Sbjct: 634 ELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIEN 693
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+H F +GD HP + I ++ L + EGY P VL D+ED +KE L +HS
Sbjct: 694 QGRVHYFSVGDTSHPDTKLINGMLEWLNMKARNEGYVPDFSSVLLDVEDVDKEQRLWVHS 753
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ERLA+ YGLI T + +R++KNLR+C DCH+ IKLI+ I +R II+RD NRFHHF G
Sbjct: 754 ERLALAYGLIRTPSISPLRIIKNLRICADCHAAIKLISKIVQRDIIIRDMNRFHHFHEGI 813
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 814 CSCGDYW 820
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 185/403 (45%), Gaps = 74/403 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H V KLG S+ L++ Y CG + A Q+FD + E D+V+ T M+ CYV
Sbjct: 164 GFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAI-EYKDMVSWTGMVACYV 222
Query: 62 EHGLVENAFEVFSRVKV---------------------------------------KDTV 82
E+ E + ++FSR+++ ++
Sbjct: 223 ENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELF 282
Query: 83 CWTAMIDGLVRNGEMARALDLFREMQRDN------------------------------- 111
+ID +++G++ AL +F EM +D+
Sbjct: 283 VGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGL 342
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
V PN+ T+ +L AC+ L L+LG IH ++ K +D+N V AL++MY++CG ++ +L
Sbjct: 343 VLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSL 402
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
Q+F E ++N++I G G +A+ +F++M+ ++ T+VT+ VL AC+
Sbjct: 403 QLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIA 462
Query: 232 LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSL 291
++ G +I S++ + ++D+ ++ G ++A + +M D + ++
Sbjct: 463 ALEPGSQI-HSLSVKTIYDKNTVVGNALIDMYAKCGNIKDA-RLVFDMLREHDQVSWNAM 520
Query: 292 LSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNAYASSG 333
+S +HG + + +L+ D T+V + +A +++G
Sbjct: 521 ISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAG 563
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 158/367 (43%), Gaps = 62/367 (16%)
Query: 47 CNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
C D+ A+ +++N YV++ + +A ++F + ++TV + +I G + + A+ LF
Sbjct: 76 CLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSR 135
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
+Q + N VL +LG +H+ + K D + VG ALI+ YS CG
Sbjct: 136 LQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGY 195
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+ A QVF+ ++ +D+ ++ ++A + E++++F M G +P TF VL A
Sbjct: 196 AECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKA 255
Query: 227 C-----------SHG------------------------GLVDLGFEIFQSMTRDYGIEP 251
C HG G VD ++F+ M +D
Sbjct: 256 CVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKD----- 310
Query: 252 QIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIA 308
+ + ++ ++ + EEA + M+ + P+ L SLL AC LQLG QI
Sbjct: 311 DVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQI- 369
Query: 309 KRLLDCRSADSG--TYVLLSNA----YASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVN 362
C G V +SNA YA G+ + ++Q+ + P C+ + N
Sbjct: 370 ----HCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQL--------FSESPNCTDVSWN 417
Query: 363 NEIHEFI 369
I ++
Sbjct: 418 TVIVGYV 424
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L +C + G G+++H + K L+ L+N Y + + A ++F+EM +R+
Sbjct: 50 LLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRN 109
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
++ +LI G + R EA+ +F + +G F VL LGF +
Sbjct: 110 TVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSV 167
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/490 (39%), Positives = 293/490 (59%), Gaps = 17/490 (3%)
Query: 2 GRE-IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
G+E +HG VLK G+ N + L++LY + G+ + A +F + E DVV+ +I
Sbjct: 394 GKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAI-EPRDVVSWNTLITGC 452
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V G + +AF++ ++ + DG+ E + V PN VT++
Sbjct: 453 VVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDE-------------EPVVPNNVTLM 499
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L C+ L A G+ IH Y +H +D + VG AL++MY++CG + + VF+ + +R
Sbjct: 500 TLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKR 559
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMI-NQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+V T+N LI MHG EA+ +F M+ + +P +VTF+ L ACSH G+VD G E+
Sbjct: 560 NVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMEL 619
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI-MLGSLLSACKIH 298
F SM R++G++P + + C VD+L R GR +EAY IT+M+ + S L AC++H
Sbjct: 620 FHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLH 679
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
+ LGE A+RL ++ YVLL N Y+++G W+++ ++R +M++ GV KEPGCS
Sbjct: 680 RNVPLGEIAAERLFQLEPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSW 739
Query: 359 IEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALA 418
IE++ IH F+ G+ HP+ ++ M L + ++ +GY+P T VLHDIE+ EK L
Sbjct: 740 IELDGVIHRFMAGESAHPESTLVHAHMDALWERMRNQGYTPDTSSVLHDIEESEKAAILR 799
Query: 419 IHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFE 478
HSE+LAI +GL+ T P TIRV KNLRVCNDCH K I+ + R+I++RD RFHHF
Sbjct: 800 YHSEKLAIAFGLLRTPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFV 859
Query: 479 NGTCSCGDYW 488
+G CSCGDYW
Sbjct: 860 DGACSCGDYW 869
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 137/292 (46%), Gaps = 13/292 (4%)
Query: 30 KCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDT-----VCW 84
+ G A L + + ++ A +++ Y GLV++A +F V D+ V W
Sbjct: 180 RLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTW 239
Query: 85 TAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGK 144
M+ LV++G A+++ +M VRP+ +T L ACSQL L LGR +H+Y+ K
Sbjct: 240 NTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLK 299
Query: 145 HR-IDLNHIVGGALINMYSRCGDIDKALQVFEEMK--ERDVTTYNSLIAGLAMHGRSIEA 201
+ N V AL++MY+ + A +VF+ + R + +N+++ G A G EA
Sbjct: 300 DSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEA 359
Query: 202 VEMFREM-INQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIV 260
+E+F M G+ P++ T GVL AC+ G E G+ ++
Sbjct: 360 LELFARMEAEAGVVPSETTIAGVLPACARSETF-AGKEAVHGYVLKRGMADNPFVQNALM 418
Query: 261 DLLSRVGRPEEAYDFITNMKIAP-DHIMLGSLLSACKIHGKLQLGEQIAKRL 311
DL +R+G E A I P D + +L++ C + G + Q+ + +
Sbjct: 419 DLYARLGDMEAARWIFA--AIEPRDVVSWNTLITGCVVQGHIHDAFQLVREM 468
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 159/398 (39%), Gaps = 103/398 (25%)
Query: 3 REIHGQVLKLGLRSNRSTRLK--LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
R IHG L+ L + + L+ Y +CG+ A+ LF+ MP
Sbjct: 79 RSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALALFNAMPS-------------- 124
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+D V + ++I L ALD R+M + + T+V
Sbjct: 125 ------------------RDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLV 166
Query: 121 CVLSACSQLGA-LELGRWIHSYM-------GKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
VL ACS L L LGR H++ G R N AL++MY+R G +D A
Sbjct: 167 SVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFN-----ALLSMYARLGLVDDAQM 221
Query: 173 VFEEMKERD-----VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+F + D V T+N++++ L GR EA+E+ +M+ +G+RP +TF L AC
Sbjct: 222 LFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPAC 281
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLS---RVGRPEEAYDFITNMKIAPD 284
S ++ LG E+ + +D + +VD+ + RVG +D +
Sbjct: 282 SQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPG------ 335
Query: 285 HIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAK 344
G QL G + + YA +G +EA+++ A+
Sbjct: 336 --------------GHRQL----------------GLWNAMVCGYAQAGMDEEALELFAR 365
Query: 345 MK-EAGVQKE--------PGCSSIEV---NNEIHEFIL 370
M+ EAGV P C+ E +H ++L
Sbjct: 366 MEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVL 403
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 150/353 (42%), Gaps = 33/353 (9%)
Query: 37 AMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKV--KDTVCWTAMIDGLVRN 94
A L D N VAS +++ Y H V A VF V + W AM+ G +
Sbjct: 295 AYVLKDSDLAANSFVASA-LVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQA 353
Query: 95 GEMARALDLFREMQRD-NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIV 153
G AL+LF M+ + V P+E TI VL AC++ +H Y+ K + N V
Sbjct: 354 GMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPFV 413
Query: 154 GGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG- 212
AL+++Y+R GD++ A +F ++ RDV ++N+LI G + G +A ++ REM QG
Sbjct: 414 QNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGR 473
Query: 213 -----------------IRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEH 255
+ P VT + +L C+ G EI R + ++ I
Sbjct: 474 FTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMR-HALDSDIAV 532
Query: 256 YGCIVDLLSRVG---RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
+VD+ ++ G +D + + I L+ A +HG + R++
Sbjct: 533 GSALVDMYAKCGCLALSRAVFDRLPKRNV----ITWNVLIMAYGMHGLGDEAIALFDRMV 588
Query: 313 DCRSADSG--TYVLLSNAYASSGKWKEAVQIRAKMKEA-GVQKEPGCSSIEVN 362
A T++ A + SG +++ MK GVQ P + V+
Sbjct: 589 MSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVD 641
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 115/256 (44%), Gaps = 38/256 (14%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+EIHG ++ L S+ + LV++Y KCG + +FD +P+ N V+ V+I Y
Sbjct: 513 KGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRN-VITWNVLIMAY 571
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HGL + A +F R+ + + +PNEVT +
Sbjct: 572 GMHGLGDEAIALFDRM------------------------------VMSNEAKPNEVTFI 601
Query: 121 CVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
L+ACS G ++ G HS H + + +++ R G +D+A + M+
Sbjct: 602 AALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYSIITSMEP 661
Query: 179 -ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVT-FVGVLNACSHGGLVDLG 236
E+ V+ ++S + +H R++ E+ E + Q + P + + +V + N S GL +
Sbjct: 662 GEQQVSAWSSFLGACRLH-RNVPLGEIAAERLFQ-LEPDEASHYVLLCNIYSAAGLWEKS 719
Query: 237 FEIFQSM-TRDYGIEP 251
E+ M R EP
Sbjct: 720 SEVRNRMRQRGVSKEP 735
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/487 (41%), Positives = 292/487 (59%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +IH VLK+GL SN L+++Y KCGE
Sbjct: 326 GNQIHSCVLKVGLDSNVFVSNALMDVYAKCGE---------------------------- 357
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+EN+ ++F+ K+ V W +I G V+ G+ +AL+LF M +++P EVT
Sbjct: 358 ----IENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSS 413
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL A + L ALE GR IHS K + + +V +LI+MY++CG ID A F++M ++D
Sbjct: 414 VLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQD 473
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
++N+LI G ++HG +EA+ +F M +P K+TFVGVL+ACS+ GL+D G F+
Sbjct: 474 EVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFK 533
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM +DYGIEP IEHY C+V LL R G+ +EA I + P ++ +LL AC IH L
Sbjct: 534 SMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNL 593
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
LG+ A+R+L+ D T+VLLSN YA++ +W +R MK+ V+KEPG S +E
Sbjct: 594 DLGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVEN 653
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+H F +GD HP + I+ ++ L + + GY P VVL D+ED EKE L +HS
Sbjct: 654 QGVVHYFTVGDTSHPNIKLIFAMLEWLYKKTRDAGYVPDCSVVLLDVEDDEKERLLWMHS 713
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ERLA+ +GLI +IR++KNLR+C DCH++IKL++ I +R+I++RD NRFHHF G
Sbjct: 714 ERLALAFGLIQIPSGCSIRIIKNLRICVDCHAVIKLVSKIVQREIVIRDINRFHHFRQGV 773
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 774 CSCGDYW 780
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 117/230 (50%), Gaps = 2/230 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D T +I+ Y G V+ A +VF + KD V WT M+ N +L LF +M+
Sbjct: 138 DAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMR 197
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
RPN TI L +C+ L A ++G+ +H K D + VG AL+ +Y++ G+I
Sbjct: 198 IMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIA 257
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNAC 227
+A Q FEEM + D+ ++ +I+ A +S EA+E+F M + P TF VL AC
Sbjct: 258 EAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQAC 317
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFIT 277
+ L++LG +I S G++ + ++D+ ++ G E + T
Sbjct: 318 ASLVLLNLGNQI-HSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFT 366
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 138/299 (46%), Gaps = 35/299 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +HG LK+ + + L+ELY K GE +A Q
Sbjct: 224 GKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQF--------------------- 262
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR-PNEVTIV 120
F + D + W+ MI ++ + AL+LF M++ +V PN T
Sbjct: 263 -----------FEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFA 311
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL AC+ L L LG IHS + K +D N V AL+++Y++CG+I+ ++++F E+
Sbjct: 312 SVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEK 371
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+ +N++I G G +A+ +F M+ I+PT+VT+ VL A + ++ G +I
Sbjct: 372 NEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQI- 430
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
S+T ++D+ ++ GR ++A M D + +L+ IHG
Sbjct: 431 HSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMD-KQDEVSWNALICGYSIHG 488
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 146/334 (43%), Gaps = 47/334 (14%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D+ A +++N YV G +E+A ++F + + +TV + + G R+ + RA L +
Sbjct: 37 DLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLF 96
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
R+ N+ +L + + +H+Y+ K + VG ALI+ YS CG++D
Sbjct: 97 REGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVD 156
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A QVF+ + +D+ ++ ++A A + +++ +F +M G RP T L +C+
Sbjct: 157 AARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCN 216
Query: 229 -----------HGGLVDLGF------------------------EIFQSMTRDYGIEPQI 253
HG + + + + F+ M +D I
Sbjct: 217 GLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIP--- 273
Query: 254 EHYGCIVDLLSRVGRPEEAYDFITNMK----IAPDHIMLGSLLSACKIHGKLQLGEQIAK 309
+ ++ ++ + +EA + M+ + P++ S+L AC L LG QI
Sbjct: 274 --WSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHS 331
Query: 310 RLLDCRSADSGTYV--LLSNAYASSGKWKEAVQI 341
+L DS +V L + YA G+ + +V++
Sbjct: 332 CVLKV-GLDSNVFVSNALMDVYAKCGEIENSVKL 364
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/469 (39%), Positives = 276/469 (58%), Gaps = 34/469 (7%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
L+++Y KC FK A +F+ +P + ++ V
Sbjct: 448 LIDMYSKCRSFKAARTIFNSIPR------------------------------RERNVVT 477
Query: 84 WTAMIDGLVRNGEMARALDLFREM--QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSY 141
WT MI G + G+ AL LF EM + V PN TI C+L AC+ L +L +G+ IH+Y
Sbjct: 478 WTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAY 537
Query: 142 MGKHRI--DLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSI 199
+ +H + V LI+MYS+CGD+D A VF+ M +R+ ++ S+++G MHGR
Sbjct: 538 VTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGK 597
Query: 200 EAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI 259
EA+++F +M G P ++F+ +L ACSH G+VD G + F M DYG+ +HY C+
Sbjct: 598 EALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACV 657
Query: 260 VDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADS 319
+DLL+R GR ++A+ I M + P + +LLSAC++H ++L E +L+ ++ +
Sbjct: 658 IDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAEND 717
Query: 320 GTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQRE 379
G+Y L+SN YA++ +WK+ +IR MK++G++K PGCS ++ F +GD HP
Sbjct: 718 GSYTLISNIYATARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSP 777
Query: 380 QIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTI 439
+IY ++ L +K+ GY P T LHD++D EK L HSE+LA+ YGL++T P I
Sbjct: 778 EIYSLLERLIGRIKVMGYVPETNFALHDVDDEEKNNLLTEHSEKLALAYGLLTTSPGCPI 837
Query: 440 RVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
R+ KNLRVC DCHS I+ I +IIVRD +RFHHF+NG+CSCG YW
Sbjct: 838 RITKNLRVCGDCHSAFIYISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 169/321 (52%), Gaps = 23/321 (7%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+ +EIH ++ G ++ L++ Y KCG KDA+ +F+ M E DVV+ M+ Y
Sbjct: 277 QTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVM-EFKDVVSWNAMVTGY 335
Query: 61 VEHGLVENAFEVFSRVKVK----DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
+ G AFE+F ++ + D + W+A+I G + G ALD F++M PN
Sbjct: 336 TQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNS 395
Query: 117 VTIVCVLSACSQLGALELGRWIHSY-MGKHRIDLNH-----------IVGGALINMYSRC 164
VTI+ +LSAC+ LGAL G H+Y + K + L++ +V ALI+MYS+C
Sbjct: 396 VTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKC 455
Query: 165 GDIDKALQVFEEM--KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ--GIRPTKVTF 220
A +F + +ER+V T+ +I G A +G S +A+++F EMI++ + P T
Sbjct: 456 RSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTI 515
Query: 221 VGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYG-CIVDLLSRVGRPEEAYDFITNM 279
+L AC+H + +G +I +TR + E + C++D+ S+ G + A + +M
Sbjct: 516 SCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSM 575
Query: 280 KIAPDHIMLGSLLSACKIHGK 300
+ + S++S +HG+
Sbjct: 576 P-KRNEVSWTSMMSGYGMHGR 595
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 115/258 (44%), Gaps = 36/258 (13%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
G HG + G SN LV +Y + G +DA +FDE+
Sbjct: 167 SGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEI---------------- 210
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM------QRDNVRP 114
+R + D + W +++ V+ ALDLF EM + N R
Sbjct: 211 -------------TRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERS 257
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
+ ++IV +L AC+ L AL + IHSY ++ + V ALI+ Y++CG + A+ VF
Sbjct: 258 DIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVF 317
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
M+ +DV ++N+++ G G+ A E+F+ M + I +T+ V+ + G
Sbjct: 318 NVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQ 377
Query: 235 LGFEIFQSMTRDYGIEPQ 252
+ FQ M YG EP
Sbjct: 378 EALDTFQQMIL-YGSEPN 394
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 150/367 (40%), Gaps = 26/367 (7%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
R+IH +++ GL S ++ L + ++ + T ++ Y+
Sbjct: 48 RQIHQKIIAYGLLSYPASLLSV------------SLPPLPSHSYVSPKSLGTGVVASYLA 95
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
G +A V RV V W ++ + G + RA+ + M R +P+ T+
Sbjct: 96 CGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYA 155
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER-- 180
L AC +L + G H + + + N V AL+ MYSR G ++ A VF+E+ +
Sbjct: 156 LKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGI 215
Query: 181 -DVTTYNSLIAGLAMHGRSIEAVEMFREMIN------QGIRPTKVTFVGVLNACSHGGLV 233
DV ++NS++A A+++F EM R ++ V +L AC+ +
Sbjct: 216 DDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKAL 275
Query: 234 DLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLS 293
EI R+ G ++D ++ G ++A + M+ D + ++++
Sbjct: 276 PQTKEIHSYAIRN-GTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFK-DVVSWNAMVT 333
Query: 294 ACKIHGKLQLGEQIAKRLL-DCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
GK ++ K + + D T+ + YA G +EA+ +M G
Sbjct: 334 GYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYG--S 391
Query: 353 EPGCSSI 359
EP +I
Sbjct: 392 EPNSVTI 398
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 11/131 (8%)
Query: 15 RSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMINCYVEHGLVENAFE 71
+ N + ++ YG G K+A+ +FD+M + D ++ V++ G+V+ +
Sbjct: 577 KRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLD 636
Query: 72 VFSRVKVKDTVCWTA-----MIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSAC 126
F ++ V +A +ID L R+G + +A +EM + P+ V +LSAC
Sbjct: 637 YFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMP---MEPSAAIWVALLSAC 693
Query: 127 SQLGALELGRW 137
+EL +
Sbjct: 694 RVHSNVELAEY 704
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/441 (40%), Positives = 277/441 (62%), Gaps = 1/441 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D++ ++N Y E G + A F ++ KD V WT+MI V NG AL+LF ++
Sbjct: 483 DIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLK 542
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ N++P+ + I+ LSA + L +L+ G+ IH ++ + L + +L++MY+ CG ++
Sbjct: 543 QTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVE 602
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+ ++F +K+RD+ + S+I MHG EA+ +F++M ++ + P +TF+ +L ACS
Sbjct: 603 NSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACS 662
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GL+ G F+ M Y +EP EHY C+VDLLSR EEAY F+ +M I P +
Sbjct: 663 HSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVW 722
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+LL AC IH +LGE AK LL + +SG Y L+SN +A+ G+W + ++R +MK
Sbjct: 723 CALLGACHIHSNKELGELAAKELLQSDTKNSGKYALISNIFAADGRWNDVEEVRLRMKGN 782
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIV-KLEGYSPSTEVVLHD 407
G++K PGCS IEV+N+IH F+ D HPQ + IY K+ + +++ K GY T+ V H+
Sbjct: 783 GLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLGKKGGYIAQTKFVFHN 842
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
+ + EK L HSERLA+ YGL+ T T+IR+ KNLR+C+DCH+ K+ + +++R ++
Sbjct: 843 VSEEEKTQMLYRHSERLALGYGLLVTPKGTSIRITKNLRICDDCHTFFKIASEVSQRALV 902
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
VRD NRFHHFE G CSCGD+W
Sbjct: 903 VRDANRFHHFERGLCSCGDFW 923
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 144/291 (49%), Gaps = 32/291 (10%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV + +I Y + G +E+A VF+ + +D V W ++ GLV+N AL+ FR+MQ
Sbjct: 282 DVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQ 341
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+P++V+++ +++A + G L G+ +H+Y ++ +D N +G LI+MY++C +
Sbjct: 342 NSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVK 401
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
FE M E+D+ ++ ++IAG A + +EA+ +FR++ +G+ + VL ACS
Sbjct: 402 HMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACS 461
Query: 229 -----------HGGLV--DLGFEIFQSMT---------RDYGIEP-------QIEHYGCI 259
HG + DL + Q+ RDY I + +
Sbjct: 462 GLKSRNFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSM 521
Query: 260 VDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQI 307
+ G P EA + ++K I PD I + S LSA L+ G++I
Sbjct: 522 ITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEI 572
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 133/302 (44%), Gaps = 50/302 (16%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+++H ++LK L + +T KL+ +Y KCG KDA++
Sbjct: 64 QGQQLHARLLKSHLSAFLAT--KLLHMYEKCGSLKDAVK--------------------- 100
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
VF + + W AM+ V +G+ A++L++EM+ V + T
Sbjct: 101 -----------VFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFP 149
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE--MK 178
VL AC LG LG IH K V ALI MY +CGD+ A +F+ M+
Sbjct: 150 SVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMME 209
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
+ D ++NS+I+ G+ +EA+ +FR M G+ TFV L V LG
Sbjct: 210 KEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMG 269
Query: 239 IFQSMTRDYGIEPQIEHYG------CIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
I +G + H+ ++ + ++ GR E+A +M + D++ +LL
Sbjct: 270 I-------HGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASM-LCRDYVSWNTLL 321
Query: 293 SA 294
S
Sbjct: 322 SG 323
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 119/264 (45%), Gaps = 31/264 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G EIHG +K G L+ +YGKCG+ A LFD +
Sbjct: 164 GAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGI----------------- 206
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ +DTV W ++I V G+ AL LFR MQ V N T V
Sbjct: 207 -------------MMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVA 253
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
L ++LG IH K + V ALI MY++CG ++ A +VF M RD
Sbjct: 254 ALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRD 313
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
++N+L++GL + +A+ FR+M N +P +V+ + ++ A G + G E+
Sbjct: 314 YVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHA 373
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSR 265
R+ G++ ++ ++D+ ++
Sbjct: 374 YAIRN-GLDSNMQIGNTLIDMYAK 396
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 162/356 (45%), Gaps = 41/356 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+E+H ++ GL SN L+++Y KC C V
Sbjct: 368 GKEVHAYAIRNGLDSNMQIGNTLIDMYAKC---------------------------CCV 400
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+H + AFE KD + WT +I G +N A++LFR++Q + + + I
Sbjct: 401 KH--MGYAFECMHE---KDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGS 455
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHI-VGGALINMYSRCGDIDKALQVFEEMKER 180
VL ACS L + R IH Y+ K DL I + A++N+Y G D A + FE ++ +
Sbjct: 456 VLRACSGLKSRNFIREIHGYVFKR--DLADIMLQNAIVNVYGEVGHRDYARRAFESIRSK 513
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D+ ++ S+I +G +EA+E+F + I+P + + L+A ++ + G EI
Sbjct: 514 DIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIH 573
Query: 241 QSMTRD-YGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+ R + +E I +VD+ + G E + ++K D I+ S+++A +HG
Sbjct: 574 GFLIRKGFFLEGPIA--SSLVDMYACCGTVENSRKMFHSVK-QRDLILWTSMINANGMHG 630
Query: 300 KLQLGEQIAKRLLDCRS-ADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
+ K++ D D T++ L A + SG E + MK G Q EP
Sbjct: 631 CGNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKY-GYQLEP 685
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 67/118 (56%), Gaps = 2/118 (1%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L C + AL G+ +H+ + K L+ + L++MY +CG + A++VF+EM ER
Sbjct: 52 LLDLCVAVKALPQGQQLHARLLKSH--LSAFLATKLLHMYEKCGSLKDAVKVFDEMTERT 109
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+ T+N+++ G+ +EA+E+++EM G+ TF VL AC G LG EI
Sbjct: 110 IFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEI 167
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 33/178 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+EIHG +++ G LV++Y CG +++ ++F + + D++ T MIN
Sbjct: 568 KGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQ-RDLILWTSMINAN 626
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG C A+ LF++M +NV P+ +T +
Sbjct: 627 GMHG------------------CGN-------------EAIALFKKMTDENVIPDHITFL 655
Query: 121 CVLSACSQLGALELGRWIHSYMG-KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+L ACS G + G+ M ++++ ++++ SR +++A Q M
Sbjct: 656 ALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSM 713
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/475 (40%), Positives = 286/475 (60%), Gaps = 8/475 (1%)
Query: 21 RLKLVELYGKCGEFKDAM-------QLFDEMPECNDVVASTVMINCYVEHGLVENAFEVF 73
++ V + C KD ++ EC D S+ +IN Y + G A VF
Sbjct: 234 KVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVEC-DAYVSSAIINMYGKCGKSLMARGVF 292
Query: 74 SRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALE 133
++ ++ V WTA++ +NG AL+LF +M+++NV+ NE T +L+AC+ L A
Sbjct: 293 DGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARR 352
Query: 134 LGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLA 193
G +H + K + +VG ALINMY++ GDI+ A +VF +M RD+ T+N++I G +
Sbjct: 353 NGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFS 412
Query: 194 MHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQI 253
HG +A+ +F++M+ P VTF GVL+AC H GLV GF + + +G++P +
Sbjct: 413 HHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGL 472
Query: 254 EHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
EHY CIV LLS+ G+ EA +F+ + D + +LL+AC +H LG +A+ +L+
Sbjct: 473 EHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLE 532
Query: 314 CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDI 373
D GTY LLSN YA +W V++R M++ ++KEPG S IE+ N H F D
Sbjct: 533 MDPNDVGTYTLLSNIYAKEKRWDGVVKVRKLMRDKKIKKEPGVSWIEIGNVTHIFTSEDN 592
Query: 374 RHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLIST 433
+HP Q Y+K++EL ++K GY+P VLHD+ED +KE+ L+ HSE+LAI YGL+
Sbjct: 593 KHPDYGQTYQKVKELLAMIKPLGYTPDIGAVLHDVEDEQKEYYLSYHSEKLAIAYGLLKL 652
Query: 434 KPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
+I V+KNLR+C+DCHS ++LI+ +T R I+VRD NRFHHF +G CSC DYW
Sbjct: 653 PSEASILVIKNLRICDDCHSAVRLISKVTNRVIVVRDANRFHHFRDGRCSCLDYW 707
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 144/286 (50%), Gaps = 6/286 (2%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
N ++ +IN Y + V A +F R+ ++ V W+A++ G + NG + + L ++M
Sbjct: 64 NSIIEVNSLINFYAKVNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDM 123
Query: 108 -QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
NV PNE + +S+C G +E GR H + K ++ V AL++MYS+C
Sbjct: 124 ISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSI 183
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+ A+ V+ E+ D+ YNS+++ L +G E +E+ R M+++ ++ KVTFV +
Sbjct: 184 VQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSL 243
Query: 227 CSHGGLVDLGFEIFQSM-TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDH 285
C+ + LG + M T D + + I+++ + G+ A ++ + +
Sbjct: 244 CASLKDLRLGLHVHGKMLTSDVECDAYVS--SAIINMYGKCGKSLMARGVFDGLQ-SRNV 300
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRL-LDCRSADSGTYVLLSNAYA 330
++ +++++C +G + + ++ + ++ TY +L NA A
Sbjct: 301 VLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACA 346
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 160/360 (44%), Gaps = 44/360 (12%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR+ HG +LK G + R LV +Y KC +DAM
Sbjct: 151 EGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMG--------------------- 189
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V++ V V D V + +++ LV NG + L++ R M ++V+ ++VT V
Sbjct: 190 -----------VWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFV 238
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
S C+ L L LG +H M ++ + V A+INMY +CG A VF+ ++ R
Sbjct: 239 NAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSR 298
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+V + +++A +G EA+ +F +M + ++ + T+ +LNAC+ G +
Sbjct: 299 NVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACA-GLSARRNGSLL 357
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ G + + ++++ ++ G E A ++M + D I +++ HG
Sbjct: 358 HGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDM-MHRDIITWNAMICGFSHHG- 415
Query: 301 LQLGEQIAKRLLDCRSADS-GTYVLLSNAYASSGKWKEAVQ----IRAKMKEAGVQKEPG 355
LG++ D +A+ YV + ++ G + + MK+ GVQ PG
Sbjct: 416 --LGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQ--PG 471
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/497 (39%), Positives = 288/497 (57%), Gaps = 40/497 (8%)
Query: 2 GREIHGQVLKLGLRSNRSTRLK-------LVELYGKCGEFKDAMQLFDEMPECNDVVAST 54
G++ H V+K L N + + L+++Y KC ++ A +FD +
Sbjct: 389 GKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEG-------- 440
Query: 55 VMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM--QRDNV 112
K K+ V WT MI G ++GE AL LF ++ Q+ ++
Sbjct: 441 ----------------------KDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSL 478
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHI-VGGALINMYSRCGDIDKAL 171
+PN T+ C L AC++LG L LGR +H+Y ++ + + VG LI+MYS+ GDID A
Sbjct: 479 KPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAAR 538
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
VF+ MK R+V ++ SL+ G MHGR EA+ +F +M G +TF+ VL ACSH G
Sbjct: 539 AVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSG 598
Query: 232 LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSL 291
+VD G F M + +GI P EHY C+VDLL R GR EA + I NM + P ++ +L
Sbjct: 599 MVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVAL 658
Query: 292 LSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
LSA +IH ++LGE A +L + + + G+Y LLSN YA++ +WK+ +IR+ MK G++
Sbjct: 659 LSASRIHANIELGEYAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIR 718
Query: 352 KEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDW 411
K PGCS I+ F +GD HP+ EQIY + +L + +K GY P T LHD++D
Sbjct: 719 KRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLLDLIKRIKDMGYVPQTSFALHDVDDE 778
Query: 412 EKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDR 471
EK L HSE+LA+ YG+++T P IR+ KNLR+C DCHS + I+ I +I++RD
Sbjct: 779 EKGDLLFEHSEKLAVAYGILTTAPGQPIRIHKNLRICGDCHSALTYISMIIDHEIVLRDS 838
Query: 472 NRFHHFENGTCSCGDYW 488
+RFHHF+ G+CSC YW
Sbjct: 839 SRFHHFKKGSCSCRSYW 855
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 180/378 (47%), Gaps = 56/378 (14%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H V GL SN +V +YG+CG DA Q+FDE+ E
Sbjct: 146 GASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLE--------------- 190
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD---NVRPNEVT 118
K++D V W +++ V+ G+ AL + M +RP+ +T
Sbjct: 191 --------------RKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAIT 236
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
+V +L AC+ + AL+ G+ +H + ++ + + VG AL++MY++C +++A +VFE +K
Sbjct: 237 LVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIK 296
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
++DV ++N+++ G + G A+ +F+ M + I+ +T+ V+ + G +
Sbjct: 297 KKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALD 356
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRV-----GRPEEAYDF--ITNMKI---APDHIML 288
+F+ M + YG+EP + ++ + V G+ AY I N+ D ++L
Sbjct: 357 VFRQM-QLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVL 415
Query: 289 GSLL---SACKIHGKLQLGEQIAKRLLDC---RSADSGTYVLLSNAYASSGKWKEAVQIR 342
L+ + CK + ++A+ + D + + T+ ++ YA G+ +A+++
Sbjct: 416 NGLIDMYAKCKSY-------RVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLF 468
Query: 343 AKMKEAGVQKEPGCSSIE 360
A++ + +P ++
Sbjct: 469 AQIFKQKTSLKPNAFTLS 486
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 153/345 (44%), Gaps = 38/345 (11%)
Query: 57 INCYVEHGLVENAFEVFSRVKVKDTVC--WTAMIDGLVRNGEMARALDLFREMQRDNVRP 114
+ Y+E G A + R+ + W A+I V+ G + L + +MQR P
Sbjct: 66 VGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLP 125
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
+ T VL AC ++ +L G +H+ + + + N + +++ MY RCG +D A Q+F
Sbjct: 126 DHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMF 185
Query: 175 EEMKER---DVTTYNSLIAGLAMHGRSIEAVEMFREMINQ---GIRPTKVTFVGVLNACS 228
+E+ ER D+ ++NS++A G+S A+ + M N +RP +T V +L AC+
Sbjct: 186 DEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACA 245
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---------YDFITNM 279
+ G ++ R+ G+ + +V + ++ + EA D ++
Sbjct: 246 SVFALQHGKQVHGFSVRN-GLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWN 304
Query: 280 KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAV 339
+ + +GS SA + +Q E+ K D T+ + YA G EA+
Sbjct: 305 AMVTGYSQIGSFDSALSLFKMMQ--EEDIK-------LDVITWSAVIAGYAQKGHGFEAL 355
Query: 340 QIRAKMKEAGVQKE--------PGCSSIEV---NNEIHEFILGDI 373
+ +M+ G++ GC+S+ + H +++ +I
Sbjct: 356 DVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNI 400
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/442 (41%), Positives = 272/442 (61%), Gaps = 3/442 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV ++ Y + G VE A VF R++ ++ + W +M+ G +NG AL LF +MQ
Sbjct: 267 DVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQ 326
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
PN VT + ++SACS LG+ LGR +H+++ ++D++ + A+++MY +CGD+D
Sbjct: 327 ASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLD 386
Query: 169 KALQVFE--EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
A+++F E+ ERDV+++N LI+G +HG EA+E+F M +G+ P +TF +L+A
Sbjct: 387 TAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSA 446
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
CSH GL+D G + F MT+ + P+++HY C+VD+L R G EA+ I + P
Sbjct: 447 CSHAGLIDEGRKCFADMTK-LSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDE 505
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
+ G+LL AC+IHG +LGE A L +G YVL+SN YA+S KWKE +R MK
Sbjct: 506 VWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMK 565
Query: 347 EAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH 406
G++K S IE E+H F D P ++Y+K++ L +K+ GY P VLH
Sbjct: 566 SRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLH 625
Query: 407 DIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKI 466
D+E +KE L HSE+LA+ +G++ I+V KNLRVC+DCH K I++I RKI
Sbjct: 626 DVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIYGRKI 685
Query: 467 IVRDRNRFHHFENGTCSCGDYW 488
IVRD NRFHHF+ G CSCGDYW
Sbjct: 686 IVRDGNRFHHFQGGRCSCGDYW 707
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 171/350 (48%), Gaps = 66/350 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +HGQV++ G S+ LV++Y KCGE DA ++FD
Sbjct: 151 GEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFD------------------- 191
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
R+ ++D VCWTAMI + +AL LFR+MQ + +E+T +
Sbjct: 192 -------------RMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAIS 238
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V SA QLG + +H Y + + VG +++ MY++CG++++A VF+ M+ER+
Sbjct: 239 VASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERN 298
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
++NS+++G +GR +A+ +F +M P VT + +++ACS+ G LG ++
Sbjct: 299 GISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKL-- 356
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
++ I +++ +D R + I +M ++ G L +A ++
Sbjct: 357 ---HNFVISSKMD-----IDTTLR--------NAIMDM-----YMKCGDLDTAVEMFNNC 395
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
+LGE+ D ++ +L + Y G KEA+++ ++M+ GV+
Sbjct: 396 ELGER-----------DVSSWNVLISGYGVHGHGKEALELFSRMQVEGVE 434
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/441 (42%), Positives = 278/441 (63%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
++ T +++ Y++ G ++ A ++F + +D V W+A+I G RNG ++ +FR+M
Sbjct: 248 SNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQM 307
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
D+V PN VT ++ ACS LG+L+ GR +H YM ++ ++L+ + I+MY++CG I
Sbjct: 308 LADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCI 367
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A +VF ++ E++V +++++I G MHG EA+ +F EM + P VTFV VL+AC
Sbjct: 368 VTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSAC 427
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SH G ++ G+ F+SM+RDYGI P EHY C+VDLL R G+ +EA FI NM P
Sbjct: 428 SHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASA 487
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
G+LL AC+IH + +L E++AK+LL S SG YV+LSN YA G W+ + R KM E
Sbjct: 488 WGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEMVKKTRLKMCE 547
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
G+ K G +SIE+ +++ F D + QI LK+ ++ GY P VLHD
Sbjct: 548 KGIHKIVGFTSIEIEEKLYLFSSEDRFAYKNTQIESLWNSLKERMRELGYVPDLRFVLHD 607
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
++D K+ L HSE+LAI +GL+++ IR+ KN+RVC DCH+ K I+ IT+RKII
Sbjct: 608 VDDEVKQEVLCGHSEKLAIVFGLLNSGEGMPIRITKNMRVCGDCHTASKFISLITRRKII 667
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
+RD RFHH ++G CSCGDYW
Sbjct: 668 MRDVKRFHHVQDGVCSCGDYW 688
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 204/439 (46%), Gaps = 62/439 (14%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D + ++N Y E G +E A +VF V +K++V W MI G + E +LF M+
Sbjct: 147 DPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMR 206
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSY-MGKHRIDLNHIVGGALINMYSRCGDI 167
R + + ++ AC + A + G+ H + K+ ID N + +L++MY +CG +
Sbjct: 207 RSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFL 266
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
D AL++FEE+ RDV ++++IAG A +GR++E++ MFR+M+ + P VTF ++ AC
Sbjct: 267 DFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLAC 326
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG-----------RPE------ 270
S G + G + M R+ G+E +++Y +D+ ++ G PE
Sbjct: 327 SSLGSLKQGRSVHGYMIRN-GVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSW 385
Query: 271 --------------EAYDFITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
EA + M+ P+ + S+LSAC G+++ G K +
Sbjct: 386 STMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSM-- 443
Query: 314 CRSADSGT------YVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHE 367
S D G Y + + +GK EA+ M EPG S+
Sbjct: 444 --SRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMP-----TEPGASAWGA------ 490
Query: 368 FILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAIC 427
+LG R +R ++ +++ K+++ LE V+L +I W + + RL +C
Sbjct: 491 -LLGACRIHRRAELAEEVA--KKLLPLESDQSGVYVMLSNIYADVGMWEM-VKKTRLKMC 546
Query: 428 -YGLISTKPYTTIRVVKNL 445
G+ +T+I + + L
Sbjct: 547 EKGIHKIVGFTSIEIEEKL 565
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 36/212 (16%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR +HG +++ G+ + +++Y KCG A ++F ++PE N V + + MIN +
Sbjct: 334 QGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKN-VFSWSTMINGF 392
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HGL A AL+LF EM+ N PN VT V
Sbjct: 393 GMHGLC-------------------------------AEALNLFYEMRSVNQLPNSVTFV 421
Query: 121 CVLSACSQLGALELGRWIH--SYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
VLSACS G +E G W H S + I ++++ R G ID+AL M
Sbjct: 422 SVLSACSHSGRIEEG-WSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMP 480
Query: 179 -ERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
E + + +L+ +H R+ A E+ ++++
Sbjct: 481 TEPGASAWGALLGACRIHRRAELAEEVAKKLL 512
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/337 (19%), Positives = 131/337 (38%), Gaps = 47/337 (13%)
Query: 55 VMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP 114
++ Y++ G + A + F+ + ++ W ++ +N L LF+ M ++
Sbjct: 52 MIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLV 111
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
+ +V + AC L + + HS K R++ + V AL+N+Y+ G +++A +VF
Sbjct: 112 DSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVF 171
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS------ 228
EE+ ++ + +I G E+F M G G++ AC
Sbjct: 172 EEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGK 231
Query: 229 -----HG-------------------------GLVDLGFEIFQSMT-RDYGIEPQIEHYG 257
HG G +D ++F+ ++ RD + +
Sbjct: 232 EGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVV------WS 285
Query: 258 CIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL-D 313
I+ +R GR E+ M + P+ + S++ AC G L+ G + ++ +
Sbjct: 286 AIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRN 345
Query: 314 CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
D Y + YA G A ++ ++ E V
Sbjct: 346 GVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNV 382
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/483 (38%), Positives = 285/483 (59%), Gaps = 4/483 (0%)
Query: 9 VLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMINCYVEHGL 65
+L+ R + T ++ G CG Q+ + N DV + +++ Y
Sbjct: 154 MLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQ 213
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
++ A VF + K+ V W A+I G R G+ L F EMQR+ T V SA
Sbjct: 214 MDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSA 273
Query: 126 CSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTY 185
+++GALE GRW+H++M K L V ++ MY++ G + A +VF+ + +RD+ T+
Sbjct: 274 LARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTW 333
Query: 186 NSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR 245
N+++ A +G EAV F E+ GI+ ++TF+ VL ACSHGGLV G + F M +
Sbjct: 334 NTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFD-MMK 392
Query: 246 DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGE 305
DY +EP+I+HY VDLL R G +EA F+ M + P + G+LL AC++H ++G+
Sbjct: 393 DYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKIGQ 452
Query: 306 QIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEI 365
A + + D+G VLL N YAS+G+W +A ++R MK GV+KEP CS +E+ N +
Sbjct: 453 YAADHVFELDPEDTGPPVLLYNIYASTGQWDDAARVRKMMKATGVKKEPACSWVEIENSV 512
Query: 366 HEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLA 425
H F+ D HP+ E+IY+ +E+ +K GY P+T+ VL I++ E+E L HSE++A
Sbjct: 513 HMFVADDSTHPKSEEIYRMWEEVNTRIKKAGYVPNTDYVLLHIKEQERETKLQYHSEKIA 572
Query: 426 ICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCG 485
+ + LI+ TIR++KN+R+C DCHS + ++ + KR+I+VRD NRFHHF NG+CSCG
Sbjct: 573 LAFALINMPAGATIRIMKNIRICGDCHSAFRYVSEVFKREIVVRDTNRFHHFSNGSCSCG 632
Query: 486 DYW 488
DYW
Sbjct: 633 DYW 635
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 97/190 (51%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+I+ Y + G V +A VF + +D V WT +I G +N A AL L +M R RP+
Sbjct: 103 LIHMYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPS 162
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
T L A G +G +H+ K+ +D + VG AL++MY+RC +D A++VF+
Sbjct: 163 GFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFD 222
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
+ ++ ++N+LIAG A G + F EM G T T+ V +A + G ++
Sbjct: 223 WLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQ 282
Query: 236 GFEIFQSMTR 245
G + M +
Sbjct: 283 GRWVHAHMIK 292
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 4/167 (2%)
Query: 99 RALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALI 158
R LDL + + P +++AC+Q L R IHS++ + R+ + + +LI
Sbjct: 48 RELDL---LLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLI 104
Query: 159 NMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKV 218
+MY +CG + A VF+ + RDV ++ LI G A + EA+ + +M+ RP+
Sbjct: 105 HMYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGF 164
Query: 219 TFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSR 265
TF L A G +G E ++ Y ++ + ++D+ +R
Sbjct: 165 TFTSFLKAAGACGGRGIG-EQMHALAVKYNLDEDVYVGSALLDMYAR 210
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 88/198 (44%), Gaps = 37/198 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR +H ++K G + ++ +Y K G DA ++FD + + D+V M+ +
Sbjct: 282 QGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQ-RDLVTWNTMLTAF 340
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++GL + A+ F E+++ ++ N++T +
Sbjct: 341 AQYGLGKE-------------------------------AVAHFEEIRKYGIQLNQITFL 369
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRI--DLNHIVGGALINMYSRCGDIDKAL-QVFEEM 177
VL+ACS G ++ G+ M + + +++H V + +++ R G + +AL VF+
Sbjct: 370 SVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYV--SFVDLLGRAGLLKEALIFVFKMP 427
Query: 178 KERDVTTYNSLIAGLAMH 195
E + +L+ MH
Sbjct: 428 MEPTAAVWGALLGACRMH 445
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/487 (40%), Positives = 285/487 (58%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++H Q+LK GL + LV+++GKCG+
Sbjct: 246 GLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGD---------------------------- 277
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
V +A +VF ++ ++ V WT+++ ++NGE L+L M R+ NE T
Sbjct: 278 ----VLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAV 333
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+A + + AL G +H+ + K I IVG ALINMYS+CG ID + VF +M+ RD
Sbjct: 334 LLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRD 393
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ T+N++I G + HG +A+ +F++M++ G P VTFVGVL+AC+H LV+ GF
Sbjct: 394 IITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLN 453
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+ + + +EP +EHY C+V +L R G EEA +F+ ++ D + LL+AC IH
Sbjct: 454 QLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIHRNY 513
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
LG +IA+ +L D GTY LLSN YA + W IR M+E V+KEPG S IE+
Sbjct: 514 NLGTKIAETILQMDPRDMGTYTLLSNMYAKARSWDSVTMIRKMMRERNVKKEPGVSWIEI 573
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N +H F HP+ QIY K+Q L +++K GY P+ E VLHD+ED +KE L HS
Sbjct: 574 RNAVHVFSSDGSNHPECIQIYNKVQLLLEMIKQLGYVPNIEAVLHDVEDEQKESYLNYHS 633
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI YGL+ IRV+KNLR+C DCH+ +KLI+ +T R IIVRD +RFHHF +GT
Sbjct: 634 EKLAIAYGLMKIPSPAPIRVIKNLRICEDCHTAVKLISKVTNRLIIVRDASRFHHFRDGT 693
Query: 482 CSCGDYW 488
C+C D+W
Sbjct: 694 CTCTDHW 700
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 152/318 (47%), Gaps = 24/318 (7%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
+++ +IN YV+ + A +F + ++ V + ++ G + +GE + LF+ M
Sbjct: 54 NIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMV 113
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+PNE VLSAC+ G + G H ++ K + +H V +L++MYS+C +D
Sbjct: 114 SSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVD 173
Query: 169 KALQVFEEM-----KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGV 223
ALQV E + D YNS++ L GR EAVE+ M+++G+ VT+V V
Sbjct: 174 LALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSV 233
Query: 224 LNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG---RPEEAYDFITNMK 280
+ C + LG ++ + + G+ + +VD+ + G + +D + N
Sbjct: 234 MGLCGQIRDLGLGLQVHAQLLKG-GLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRN 292
Query: 281 IAPDHIMLGSLLSACKIHGKLQLGE-QIAKRLLDCRS-----ADSGTYVLLSNAYASSGK 334
+ ++ SL++A LQ GE + LL C ++ T+ +L NA+A
Sbjct: 293 V----VVWTSLMTA-----YLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAA 343
Query: 335 WKEAVQIRAKMKEAGVQK 352
+ + A++++ G++
Sbjct: 344 LRHGDLLHARVEKLGIKN 361
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 146/317 (46%), Gaps = 32/317 (10%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG + HG + K GL + + LV +Y KC A+Q+ +
Sbjct: 139 EGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLES----------------- 181
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
EHG ++N D C+ ++++ LV +G + A+++ M + V + VT V
Sbjct: 182 -EHGNIDND---------NDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYV 231
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+ C Q+ L LG +H+ + K + + VG L++M+ +CGD+ A +VF+ ++ R
Sbjct: 232 SVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNR 291
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+V + SL+ +G E + + M +G + TF +LNA + + G ++
Sbjct: 292 NVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHG-DLL 350
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ GI+ ++ ++++ S+ G + +YD +M+ D I +++ HG
Sbjct: 351 HARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMR-NRDIITWNAMICGYSQHG- 408
Query: 301 LQLGEQIAKRLLDCRSA 317
LG+Q D SA
Sbjct: 409 --LGKQALLLFQDMLSA 423
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 105/231 (45%), Gaps = 15/231 (6%)
Query: 139 HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRS 198
HSY + I LN +LIN+Y +C + A +F+EM R V +YN L+ G G
Sbjct: 48 HSYREFNIIQLN-----SLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEH 102
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHY-- 256
+E V++F+ M++ +P + F VL+AC+H G V FE Q + H+
Sbjct: 103 LEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRV---FEGMQCHGFLFKFGLVFHHFVK 159
Query: 257 GCIVDLLSRVGRPEEAYDFIT----NMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
+V + S+ + A + N+ D S+L+A G+L ++ R++
Sbjct: 160 SSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMV 219
Query: 313 DCRSA-DSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVN 362
D DS TYV + +Q+ A++ + G+ + S+ V+
Sbjct: 220 DEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVD 270
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/441 (39%), Positives = 272/441 (61%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
N + S +++ Y + G ++ A+ VF ++ KD + WT+++ G +N +L +F +M
Sbjct: 397 NYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDM 456
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ V P++ + +LSAC++L LE G+ +H K + + V +L+ MY++CG +
Sbjct: 457 RVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCL 516
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
D A +F M+ +DV T+ ++I G A +G+ +++ + M++ G RP +TF+G+L AC
Sbjct: 517 DDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFAC 576
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SH GLVD G + FQ M + YGI+P EHY C++DL R G+ +EA + M + PD +
Sbjct: 577 SHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATV 636
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
SLLSAC++H L+L E+ A L + ++ YV+LSN Y++S KW + +IR MK
Sbjct: 637 WKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKS 696
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
G+ KEPGCS +E+N+ ++ FI D HP+ +IY K+ E+ +K GY P LHD
Sbjct: 697 KGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEAGYVPDMSFSLHD 756
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
++ KE LA HSE+LA+ +GL++ P IR+ KNLRVC DCHS +K I+ + R II
Sbjct: 757 MDKEGKEVGLAYHSEKLAVAFGLLAAPPSAPIRIFKNLRVCGDCHSAMKYISRVFTRHII 816
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
+RD N FHHF G CSCGDYW
Sbjct: 817 LRDSNCFHHFREGECSCGDYW 837
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 151/337 (44%), Gaps = 61/337 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G IHG V+K G N LV++Y KC +A LF +
Sbjct: 181 GEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLE---------------- 224
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
F R K+ V WTAM+ G +NG+ +A++ FR M V N+ T
Sbjct: 225 -----------FDR---KNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPT 270
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+ACS + A G +H ++ K N V AL++MY++CGD+ A + E M++ D
Sbjct: 271 ILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDD 330
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC---------SHGGL 232
V ++NSL+ G HG EA+ +F+ M + ++ TF VLN C HG +
Sbjct: 331 VVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLI 390
Query: 233 VDLGFEIFQSMTR-------------------DYGIEPQIEHYGCIVDLLSRVGRPEEAY 273
+ GFE ++ ++ + +E + + +V ++ EE+
Sbjct: 391 IKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESL 450
Query: 274 DFITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQI 307
+M++ PD ++ S+LSAC L+ G+Q+
Sbjct: 451 KIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQV 487
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 176/380 (46%), Gaps = 37/380 (9%)
Query: 23 KLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTV 82
+L+ K G+ DA +LFD+MP+ D + MI+ YV G + A E+F K ++
Sbjct: 70 QLLNQLSKSGQVNDARKLFDKMPQ-KDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSI 128
Query: 83 CWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM 142
W+++I G + G A DLFR M+ + + ++ T+ VL CS LG ++ G IH ++
Sbjct: 129 TWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFV 188
Query: 143 GKHRIDLNHIVGGALINMYSRCGDIDKALQVFE--EMKERDVTTYNSLIAGLAMHGRSIE 200
K+ + N V L++MY++C + +A +F+ E ++ + +++ G A +G +
Sbjct: 189 VKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYK 248
Query: 201 AVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIV 260
AVE FR M QG+ + TF +L ACS G ++ + + G + +V
Sbjct: 249 AVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKS-GFGSNVYVQSALV 307
Query: 261 DLLSRVGRPEEAYDFITNMK----IAPDHIMLG---------SLLSACKIHGK-LQLGEQ 306
D+ ++ G + A + + M+ ++ + +M+G +L +HG+ +++ +
Sbjct: 308 DMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDY 367
Query: 307 IAKRLLDCRSADS---------------GTYVLLSNA----YASSGKWKEAVQIRAKMKE 347
+L+C S Y L+SNA YA +G A + KM E
Sbjct: 368 TFPSVLNCCVVGSINPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLE 427
Query: 348 AGVQKEPGCSSIEVNNEIHE 367
V + N HE
Sbjct: 428 KDVISWTSLVTGYAQNNSHE 447
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 48/203 (23%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H +K GLR ++S LV +Y KCG DA +F M + DV+
Sbjct: 484 GKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSM-QVKDVIT--------- 533
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
WTA+I G +NG+ +L + M RP+ +T +
Sbjct: 534 ----------------------WTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIG 571
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVG--------GALINMYSRCGDIDKALQV 173
+L ACS G ++ GR K+ +N + G +I+++ R G +D+A Q+
Sbjct: 572 LLFACSHAGLVDEGR-------KYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQL 624
Query: 174 FEEMKER-DVTTYNSLIAGLAMH 195
++M + D T + SL++ +H
Sbjct: 625 LDQMDVKPDATVWKSLLSACRVH 647
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/506 (38%), Positives = 284/506 (56%), Gaps = 51/506 (10%)
Query: 2 GRE-IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
G+E +HG V+K G+ NR + L+++Y + GE
Sbjct: 405 GKEAMHGYVVKRGMAGNRFVQNALMDMYARLGE--------------------------- 437
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ------------ 108
++ A +F+ + +D V W +I G V G A A L EMQ
Sbjct: 438 -----MDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTT 492
Query: 109 ----RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC 164
PN +T++ +L C+ L A G+ IH Y +H ++ + VG AL++MY++C
Sbjct: 493 EEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKC 552
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGV 223
G + + VF+ + R+V T+N LI MHG EAV +F EM G P +VTF+
Sbjct: 553 GCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAA 612
Query: 224 LNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAP 283
L ACSH GLVD G E+F M RD+G++P + + C+VD+L R GR +EAY IT+M+
Sbjct: 613 LAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGE 672
Query: 284 DHI-MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIR 342
+ SLL AC++H ++LGE A+RL + ++ YVLL N Y+++G W ++V +R
Sbjct: 673 QQVSAWSSLLGACRLHRNVELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDKSVAVR 732
Query: 343 AKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTE 402
+M+ GV KEPGCS IE++ IH F+ G+ HP +++ M L + ++ EGY+P T
Sbjct: 733 VRMRRQGVAKEPGCSWIELDGAIHRFMAGESSHPASAEVHAHMDALWERMRREGYAPDTS 792
Query: 403 VVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANIT 462
VLHD+++ EK L HSE+LAI +GL+ P IRV KNLRVCNDCH K ++ +
Sbjct: 793 CVLHDVDEDEKAAMLRYHSEKLAIAFGLLRAPPGAAIRVAKNLRVCNDCHEAAKFMSKMV 852
Query: 463 KRKIIVRDRNRFHHFENGTCSCGDYW 488
R I++RD RFHHF +G+CSCGDYW
Sbjct: 853 GRDIVLRDVRRFHHFRDGSCSCGDYW 878
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 122/284 (42%), Gaps = 49/284 (17%)
Query: 2 GREIHGQVLK-LGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
GRE+H VLK L +N LV++Y + A ++FD +PE +
Sbjct: 301 GREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPS------------ 348
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTI 119
+ W AMI G + G AL+LF M+ + P+E T+
Sbjct: 349 ------------------RQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTM 390
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
VL AC++ +H Y+ K + N V AL++MY+R G++D A ++F +
Sbjct: 391 SGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDP 450
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREM------------INQG----IRPTKVTFVGV 223
RDV ++N+LI G + G + EA ++ EM +G P +T + +
Sbjct: 451 RDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTL 510
Query: 224 LNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
L C+ G EI R + +E I +VD+ ++ G
Sbjct: 511 LPGCAALAAPARGKEIHGYAVR-HALESDIAVGSALVDMYAKCG 553
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 30/223 (13%)
Query: 77 KVKDTVCWTAMIDGLVRNGEMARALDLFREM---QRDNVRPNEVTIVCVLSACSQLGALE 133
+++D V + ++I L + RALD R+M R +V + T+V VL ACS L +
Sbjct: 129 ELRDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDV--SSFTLVSVLLACSHLPGDD 186
Query: 134 ---LGRWIHSYM--------GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER-- 180
LGR H++ G+ R N AL++MY+R G +D A +F
Sbjct: 187 GRRLGREAHAFALKRGFLDEGRERFPFN-----ALLSMYARLGLVDDAQSLFRTTAAAFS 241
Query: 181 ----DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
DV T+N++I+ L GR EAVE+ +M++ G+RP VTF L ACS ++ LG
Sbjct: 242 PGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALG 301
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLS---RVGRPEEAYDFI 276
E+ + +D + +VD+ + +V +D +
Sbjct: 302 REMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMV 344
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 105/250 (42%), Gaps = 52/250 (20%)
Query: 153 VGGALINMYSRCGDIDKALQVFEEMKE--RDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
VG AL+ Y+RCGD+D AL +F RD +YNSLI+ L + + A++ R+M+
Sbjct: 102 VGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLA 161
Query: 211 QGIRP-TKVTFVGVLNACSH-------------------GGLVDLGFEIF---------- 240
+G + T V VL ACSH G +D G E F
Sbjct: 162 EGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYA 221
Query: 241 --------QSMTRD--YGIEP---QIEHYGCIVDLLSRVGRPEEA----YDFITNMKIAP 283
QS+ R P + + ++ LL + GR EA YD ++ + + P
Sbjct: 222 RLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVS-LGVRP 280
Query: 284 DHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV--LLSNAYASSGKWKEAVQI 341
D + S L AC L LG ++ +L + ++V L + YA + K A ++
Sbjct: 281 DGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRV 340
Query: 342 RAKMKEAGVQ 351
+ E Q
Sbjct: 341 FDMVPEPSRQ 350
>gi|357111278|ref|XP_003557441.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Brachypodium distachyon]
Length = 551
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/462 (43%), Positives = 284/462 (61%), Gaps = 19/462 (4%)
Query: 45 PECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLF 104
PE V + +++ Y GL A +F R+ K V W +D L NG+ ALDLF
Sbjct: 91 PERAHTVVANSLLHLYASCGLPAAALALFRRIPAKSLVSWNTAVDALAGNGDHIAALDLF 150
Query: 105 REMQRDN-----VRPNEVTIVCVLSACSQLGALELGRWIHSYMGK--------HRIDLNH 151
RE+Q + + P+ T+ VL AC+ GAL LG + H+ + + + +
Sbjct: 151 RELQLEGAATAGLAPDAYTVQSVLGACAGAGALSLGVYAHALLLRELGGDGDGQAVSRDV 210
Query: 152 IVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN- 210
++ +L+++Y +CG ++ A QVF+ M ERD+T++N +I LA HGR E+VE+F M
Sbjct: 211 LINNSLVDLYGKCGAVELARQVFDRMPERDITSWNVMILTLANHGRVRESVELFDRMARA 270
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
+ P +TFV VL+AC+HGG+V+ G FQ M +YGI P+IEHYGC+VD+L+R G E
Sbjct: 271 EKFVPNAITFVAVLSACNHGGMVEEGRRYFQMMVSEYGIRPRIEHYGCMVDILARAGFIE 330
Query: 271 EAYDFITNMKIAPDHIMLGSLLSAC-KIHGKLQLGEQIAKRLLDCRS-ADSGTYVLLSNA 328
EA D ++ M PD I+ SLL AC K + L+L E +AK LD A SG YVLLS
Sbjct: 331 EALDVVSGMNCRPDAIIWRSLLDACCKQNAGLELSEAMAKLALDVPDDAVSGVYVLLSQV 390
Query: 329 YASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQEL 388
YAS+ +W + +R M+E G++KEPG SSIE++ +H+F+ GD HP E+IYKK+ E+
Sbjct: 391 YASAQRWNDVGMVRRLMREEGLKKEPGFSSIEMDGLVHQFVAGDTSHPLTEEIYKKLDEI 450
Query: 389 KQIVKLEGYSP--STEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLR 446
+Q + GY P S ++ I D K AL +HSERLAI +GL+ IR++KNLR
Sbjct: 451 EQRLTSSGYKPNLSAAPMVAGI-DHAKGAALRLHSERLAISFGLLKATDGAPIRILKNLR 509
Query: 447 VCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
VC DCH++ K+I+ + +IIVRDR RFHHF++G CSC DYW
Sbjct: 510 VCKDCHTISKIISELYGVEIIVRDRIRFHHFKDGACSCKDYW 551
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 78/171 (45%), Gaps = 37/171 (21%)
Query: 23 KLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTV 82
LV+LYGKCG + A Q+FD MPE D+ + VMI HG V + E+F R
Sbjct: 215 SLVDLYGKCGAVELARQVFDRMPE-RDITSWNVMILTLANHGRVRESVELFDR------- 266
Query: 83 CWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM 142
MARA + PN +T V VLSAC+ G +E GR M
Sbjct: 267 --------------MARA---------EKFVPNAITFVAVLSACNHGGMVEEGRRYFQMM 303
Query: 143 GKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER-DVTTYNSLI 189
R + H G ++++ +R G I++AL V M R D + SL+
Sbjct: 304 VSEYGIRPRIEHY--GCMVDILARAGFIEEALDVVSGMNCRPDAIIWRSLL 352
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 109/229 (47%), Gaps = 18/229 (7%)
Query: 99 RALDLFREMQRDNVRPN-EVTIVCVLSACSQLGALELGRWIHSYMGKHRID--LNHIVGG 155
RAL LFR + P ++ LSA S L AL GR +H+ K + + +V
Sbjct: 41 RALLLFRSLHASPSPPPLHFSLPPALSAASFLAALPEGRQLHALAAKLALPERAHTVVAN 100
Query: 156 ALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM-----IN 210
+L+++Y+ CG AL +F + + + ++N+ + LA +G I A+++FRE+
Sbjct: 101 SLLHLYASCGLPAAALALFRRIPAKSLVSWNTAVDALAGNGDHIAALDLFRELQLEGAAT 160
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYG-------IEPQIEHYGCIVDLL 263
G+ P T VL AC+ G + LG + R+ G + + +VDL
Sbjct: 161 AGLAPDAYTVQSVLGACAGAGALSLGVYAHALLLRELGGDGDGQAVSRDVLINNSLVDLY 220
Query: 264 SRVGRPE---EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAK 309
+ G E + +D + I ++M+ +L + ++ ++L +++A+
Sbjct: 221 GKCGAVELARQVFDRMPERDITSWNVMILTLANHGRVRESVELFDRMAR 269
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/440 (40%), Positives = 279/440 (63%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
++ + +++ Y + G + +A +VF + + V WT+MI G R G ++ LF EM+
Sbjct: 258 ELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEME 317
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
++++ PN +T+ C+L AC+ L ALE G+ IH ++ ++ L+ V AL++MY +CG +
Sbjct: 318 KEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALG 377
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +F+ + E+D+ ++ +IAG MHG EA+ F EM N GI P +V+F+ +L ACS
Sbjct: 378 LARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACS 437
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GL+D G+ F M + IEP+ EHY CIVDLL+R G +AY FI M I PD +
Sbjct: 438 HSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIW 497
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
G+LL C+I+ ++L E++A+ + + ++G YVLL+N YA + KW+E ++R ++
Sbjct: 498 GALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRR 557
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
G++K PGCS IE+ ++H F+ GD HP +I +++ + +K EG+ P L
Sbjct: 558 GLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKA 617
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
+D EKE AL HSE++A+ +G++S P T+RV KNLRVC DCH M K ++ + KR II+
Sbjct: 618 DDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIIL 677
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD NRFHHF++G+CSC +W
Sbjct: 678 RDSNRFHHFKDGSCSCRGHW 697
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 167/396 (42%), Gaps = 85/396 (21%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR IH + + + KLV +Y CG+ ++ ++FD++ V +++N Y
Sbjct: 119 DGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVAN-EKVFLWNLLMNGY 177
Query: 61 VEHG------------------LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALD 102
+ G VE+A ++F + +D + W +MI G V NG + LD
Sbjct: 178 AKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLD 237
Query: 103 LFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYS 162
LF +M + + T+V V + LN+ L++MYS
Sbjct: 238 LFEQMLLLGINTDLATMVSV-----------------------ELTLNN----CLLDMYS 270
Query: 163 RCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVG 222
+ G+++ A+QVFE M ER V ++ S+IAG A G S +V +F EM + + P +T
Sbjct: 271 KSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMAC 330
Query: 223 VLNACSHGGLVDLGFEIFQSMTRD-YGIEPQIEHYGCIVDLLSRVGR-----------PE 270
+L AC+ ++ G EI + R+ + ++ + + +VD+ + G PE
Sbjct: 331 ILPACASLAALERGQEIHGHILRNGFSLDRHVAN--ALVDMYLKCGALGLARLLFDMIPE 388
Query: 271 E-----------------------AYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQI 307
+ A++ + N I PD + S+L AC G L G
Sbjct: 389 KDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGF 448
Query: 308 AKRLLD--CRSADSGTYVLLSNAYASSGKWKEAVQI 341
+ + C S Y + + A +G +A +
Sbjct: 449 FNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKF 484
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 122/279 (43%), Gaps = 69/279 (24%)
Query: 95 GEMARALDLFREMQRDNVRPNEVTIVC-VLSACSQLGALELGRWIHSYMGKHRIDLNHIV 153
G + RA++L + + ++ E+ C VL C+ L +++ GR IHS + + ++++ ++
Sbjct: 82 GNLRRAMELINQSPKPDL---ELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVL 138
Query: 154 GGALINMYSRCGD----------------------------------------------- 166
G L+ MY CGD
Sbjct: 139 GSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGI 198
Query: 167 --IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGV- 223
++ A ++F+E+ +RDV ++NS+I+G +G S + +++F +M+ GI T V V
Sbjct: 199 RRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVE 258
Query: 224 --LNAC-----SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFI 276
LN C S G ++ ++F++M E + + ++ +R G + +
Sbjct: 259 LTLNNCLLDMYSKSGNLNSAIQVFETMG-----ERSVVSWTSMIAGYAREGLSDMSVRLF 313
Query: 277 TNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
M+ + P+ I + +L AC L+ G++I +L
Sbjct: 314 HEMEKEDLFPNSITMACILPACASLAALERGQEIHGHIL 352
>gi|15220333|ref|NP_171976.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75192500|sp|Q9MAT2.1|PPR10_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g04840
gi|7211995|gb|AAF40466.1|AC004809_24 F13M7.17 [Arabidopsis thaliana]
gi|332189629|gb|AEE27750.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/522 (36%), Positives = 300/522 (57%), Gaps = 36/522 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDE------------------ 43
GR +H LK + + RL LV++Y K G+ K A Q+F+E
Sbjct: 145 GRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLIN 204
Query: 44 -----------------MPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTA 86
MPE N ST +I YV+ G + A ++F + K+ V WT
Sbjct: 205 GYCRAKDMHMATTLFRSMPERNSGSWST-LIKGYVDSGELNRAKQLFELMPEKNVVSWTT 263
Query: 87 MIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHR 146
+I+G + G+ A+ + EM ++PNE TI VLSACS+ GAL G IH Y+ +
Sbjct: 264 LINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNG 323
Query: 147 IDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
I L+ +G AL++MY++CG++D A VF M +D+ ++ ++I G A+HGR +A++ FR
Sbjct: 324 IKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFR 383
Query: 207 EMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRV 266
+M+ G +P +V F+ VL AC + VDLG F SM DY IEP ++HY +VDLL R
Sbjct: 384 QMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRA 443
Query: 267 GRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLS 326
G+ EA++ + NM I PD +L ACK H + E +++ LL+ G+Y+ L
Sbjct: 444 GKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLD 503
Query: 327 NAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQ 386
+AS G ++ + R +++ ++ G S IE++ ++++F GD H ++I K+
Sbjct: 504 KTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLD 563
Query: 387 ELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLR 446
E+ + +GY+P + +HDIE+ EKE IHSE+LA+ G + T P TTIR++KNLR
Sbjct: 564 EIISLAIQKGYNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLR 623
Query: 447 VCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
+C DCHS++K ++ I++R I++RD +FHHF++G CSCGDYW
Sbjct: 624 ICGDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 148/356 (41%), Gaps = 50/356 (14%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
R +H Q+L+ G+ S+R A QL C+ ++ S
Sbjct: 46 RHVHAQILRRGVLSSRV-----------------AAQLV----SCSSLLKSP-------- 76
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
+ + +F + ++ A+I GL N ++ F M R V+P+ +T V
Sbjct: 77 ----DYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFV 132
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE----MK 178
L + S+LG LGR +H+ K+ +D + V +L++MY++ G + A QVFEE +K
Sbjct: 133 LKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIK 192
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
+ + +N LI G A +FR M + G +++ G ++ +
Sbjct: 193 KESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDS----GELNRAKQ 248
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSAC 295
+F+ M E + + +++ S+ G E A M + P+ + ++LSAC
Sbjct: 249 LFELMP-----EKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSAC 303
Query: 296 KIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
G L G +I +LD D L + YA G+ A + + M +
Sbjct: 304 SKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDI 359
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 25/247 (10%)
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
P+E + ++ AC +L R +H+ + + + L+ V L++ S D +L +
Sbjct: 27 PDESHFISLIHACKDTASL---RHVHAQILRRGV-LSSRVAAQLVSCSSLLKSPDYSLSI 82
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV 233
F +ER+ N+LI GL + R +V F M+ G++P ++TF VL + S G
Sbjct: 83 FRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFR 142
Query: 234 DLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL- 292
LG + + +++ ++ +VD+ ++ G+ + A+ +PD I S+L
Sbjct: 143 WLGRALHAATLKNF-VDCDSFVRLSLVDMYAKTGQLKHAFQVFEE---SPDRIKKESILI 198
Query: 293 ---------SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRA 343
A +H L + +R +SG++ L Y SG+ A Q+
Sbjct: 199 WNVLINGYCRAKDMHMATTLFRSMPER-------NSGSWSTLIKGYVDSGELNRAKQLFE 251
Query: 344 KMKEAGV 350
M E V
Sbjct: 252 LMPEKNV 258
>gi|356546233|ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/490 (38%), Positives = 286/490 (58%), Gaps = 37/490 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H V G S+ + L+ Y K + A ++FDEMP+
Sbjct: 127 GTLVHSHVFVSGYASDSFVQAALIAFYAKSCTPRVARKVFDEMPQ--------------- 171
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ V W +MI G +NG A+++F +M+ V P+ T V
Sbjct: 172 -----------------RSIVAWNSMISGYEQNGLANEAVEVFNKMRESRVEPDSATFVS 214
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLSACSQLG+L+ G W+H + I +N ++ +L+NM+SRCGD+ +A VF M E +
Sbjct: 215 VLSACSQLGSLDFGCWLHDCIVGSGITMNVVLATSLVNMFSRCGDVGRARAVFYSMIEGN 274
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V + ++I+G MHG +EA+E+F M +G+ P VTFV VL+AC+H GL+D G +F
Sbjct: 275 VVLWTAMISGYGMHGYGVEAMEVFHRMKARGVVPNSVTFVAVLSACAHAGLIDEGRSVFA 334
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIH 298
SM ++YG+ P +EH+ C+VD+ R G EAY F+ + ++ P + ++L ACK+H
Sbjct: 335 SMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVKGLNSDELVP--AVWTAMLGACKMH 392
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
LG ++A+ L++ + G YVLLSN YA +G+ +R M + G++K+ G S+
Sbjct: 393 KNFDLGVEVAENLINAEPENPGHYVLLSNMYALAGRMDRVESVRNVMIQRGLKKQVGYST 452
Query: 359 IEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALA 418
I+V+N + F +GD HP+ +IY + EL K GY+P E +H++E E+E+AL
Sbjct: 453 IDVDNRSYLFSMGDKSHPETNEIYCFLDELIWRCKDAGYAPVPESAMHELEGEEREYALR 512
Query: 419 IHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFE 478
HSE+LA+ +GL+ T T+R+VKNLR+C DCHS IK I+ + R+IIVRD+ RFHHF
Sbjct: 513 YHSEKLAVAFGLMKTGDGVTLRIVKNLRICEDCHSAIKFISAVMNREIIVRDKLRFHHFR 572
Query: 479 NGTCSCGDYW 488
G+CSC DYW
Sbjct: 573 EGSCSCSDYW 582
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 133/278 (47%), Gaps = 5/278 (1%)
Query: 72 VFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGA 131
+F V D+ + ++I + G A+ +R M + P+ T V+ AC+ L
Sbjct: 64 LFRSVSDPDSFLFNSLIKASSKFGFSLDAVLFYRRMLLSRIVPSTYTFTSVIKACADLSL 123
Query: 132 LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAG 191
L +G +HS++ + V ALI Y++ A +VF+EM +R + +NS+I+G
Sbjct: 124 LCIGTLVHSHVFVSGYASDSFVQAALIAFYAKSCTPRVARKVFDEMPQRSIVAWNSMISG 183
Query: 192 LAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEP 251
+G + EAVE+F +M + P TFV VL+ACS G +D G + + GI
Sbjct: 184 YEQNGLANEAVEVFNKMRESRVEPDSATFVSVLSACSQLGSLDFGCWLHDCIVGS-GITM 242
Query: 252 QIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
+ +V++ SR G A +M I + ++ +++S +HG ++ R
Sbjct: 243 NVVLATSLVNMFSRCGDVGRARAVFYSM-IEGNVVLWTAMISGYGMHGYGVEAMEVFHR- 300
Query: 312 LDCRSA--DSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+ R +S T+V + +A A +G E + A MK+
Sbjct: 301 MKARGVVPNSVTFVAVLSACAHAGLIDEGRSVFASMKQ 338
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 72/181 (39%), Gaps = 33/181 (18%)
Query: 157 LINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPT 216
L+ + G I ++F + + D +NSLI + G S++AV +R M+ I P+
Sbjct: 48 LLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKASSKFGFSLDAVLFYRRMLLSRIVPS 107
Query: 217 KVTFVGVLNACSHGGLVDLGF----EIFQS-MTRDYGIE--------------------- 250
TF V+ AC+ L+ +G +F S D ++
Sbjct: 108 TYTFTSVIKACADLSLLCIGTLVHSHVFVSGYASDSFVQAALIAFYAKSCTPRVARKVFD 167
Query: 251 --PQ--IEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQL 303
PQ I + ++ + G EA + M ++ PD S+LSAC G L
Sbjct: 168 EMPQRSIVAWNSMISGYEQNGLANEAVEVFNKMRESRVEPDSATFVSVLSACSQLGSLDF 227
Query: 304 G 304
G
Sbjct: 228 G 228
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/489 (41%), Positives = 303/489 (61%), Gaps = 34/489 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GREIHG +L+ G + V T +++ Y
Sbjct: 202 GREIHGHILRHGFEGH--------------------------------VHIMTTLLDMYA 229
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN--VRPNEVTI 119
G V NA VF ++ VK+ V W+AMI +NG+ AL+LFR+M +N + PN VT+
Sbjct: 230 RFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTM 289
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V VL AC+ L ALE G+ +H Y+ + +D V AL+ +Y+RCG+++ +VFE M++
Sbjct: 290 VSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEK 349
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
RDV ++NSLI+ +HG +A+++F+EMI+QG+ P+ ++FV VL ACSH GLV+ G +
Sbjct: 350 RDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVL 409
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F+SM R + I P +EHY C+VDLL R R +EA I +M+I P + GSLL +C+IH
Sbjct: 410 FESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLLGSCRIHC 469
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
++L E+ RL + ++G YVLL++ YA + W E +++ ++ G+QK PG S I
Sbjct: 470 NVELAERATSRLFELEPTNAGNYVLLADIYAEAKMWNEVKRVKMLLEARGLQKVPGRSCI 529
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E+ +I+ F+ D +PQ EQ++ + +L +K +GY P T+VVL+D++ EKE +
Sbjct: 530 EIRRKIYSFMSVDEFNPQIEQLHALLLKLSMEMKEKGYVPDTKVVLYDLDPEEKERIVLG 589
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LA+ +GLI++K TIR+ KNLR+C DCHS+ K I+ R+I+VRD NRFH F++
Sbjct: 590 HSEKLALAFGLINSKKGETIRITKNLRLCEDCHSVTKFISKFANREILVRDVNRFHLFQD 649
Query: 480 GTCSCGDYW 488
G CSCGDYW
Sbjct: 650 GVCSCGDYW 658
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 140/271 (51%), Gaps = 8/271 (2%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D +T +IN Y E ++NA +VF + + + W A+ L G LDL+R M
Sbjct: 112 DPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMN 171
Query: 109 RDNVRPNEVTIVCVLSAC----SQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC 164
R V + T VL AC + + L GR IH ++ +H + + + L++MY+R
Sbjct: 172 RIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARF 231
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI--NQGIRPTKVTFVG 222
G + A +VF++M ++V +++++IA + +G+ +EA+E+FR+M+ NQ + P VT V
Sbjct: 232 GCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVS 291
Query: 223 VLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIA 282
VL AC+ ++ G ++ G++ + +V + +R G E + M+
Sbjct: 292 VLQACAALAALEQG-KLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERME-K 349
Query: 283 PDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
D + SL+S+ IHG + QI K ++D
Sbjct: 350 RDVVSWNSLISSYGIHGFGRKAIQIFKEMID 380
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 9/187 (4%)
Query: 85 TAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGK 144
+I L + G + +AL + Q N P + T ++ +C++ +L G +H ++
Sbjct: 51 NPLIQSLCKQGNLNQALQVLS--QEPN--PTQHTYELLILSCTRQNSLPQGIDLHRHLIH 106
Query: 145 HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEM 204
D + + LINMYS ID A +VF++ ++R + +N+L L + G E +++
Sbjct: 107 DGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDL 166
Query: 205 FREMINQGIRPTKVTFVGVLNAC-SHGGLVDL---GFEIFQSMTRDYGIEPQIEHYGCIV 260
+R M G+ + T+ VL AC + V L G EI + R +G E + ++
Sbjct: 167 YRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILR-HGFEGHVHIMTTLL 225
Query: 261 DLLSRVG 267
D+ +R G
Sbjct: 226 DMYARFG 232
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 34/197 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ +HG +L+ GL S LV +Y +CG + ++F+ M E DVV+ +I+ Y
Sbjct: 304 QGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERM-EKRDVVSWNSLISSY 362
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG F R +A+ +F+EM + P+ ++ V
Sbjct: 363 GIHG--------FGR-----------------------KAIQIFKEMIDQGLSPSPISFV 391
Query: 121 CVLSACSQLGALELGRWIHSYMGK-HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
VL ACS G +E G+ + M + H+I + ++++ R +D+A ++ ++M+
Sbjct: 392 SVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRI 451
Query: 179 ERDVTTYNSLIAGLAMH 195
E + SL+ +H
Sbjct: 452 EPGPKVWGSLLGSCRIH 468
>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
Length = 854
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/493 (39%), Positives = 286/493 (58%), Gaps = 38/493 (7%)
Query: 2 GRE-IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
G+E +HG V+K G+ NR + L+++Y + G+ DV
Sbjct: 394 GKEAVHGYVVKRGMAGNRFVQNALMDMYARLGK--------------TDV---------- 429
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR---DNVRPNEV 117
A +F+ V + D V W +I G V G +A A L REMQ+ V PN +
Sbjct: 430 --------ARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAI 481
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T++ +L C+ L A G+ IH Y +H +D + VG AL++MY++CG + + VF+ +
Sbjct: 482 TLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRL 541
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSHGGLVDLG 236
R+ T+N LI MHG EA +F M G RP +VTF+ L ACSH G+VD G
Sbjct: 542 PRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRG 601
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI-MLGSLLSAC 295
++F +M RD+G+EP + C+VD+L R GR +EAY +T+M+ + ++L AC
Sbjct: 602 LQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGAC 661
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
++H + LGE +RLL+ ++ YVLL N Y+++G+W A ++R++M+ GV KEPG
Sbjct: 662 RLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPG 721
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
CS IEV+ IH F+ G+ HP E+++ M+ L + GY+P T VLHD++D +K
Sbjct: 722 CSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAA 781
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
L HSE+LAI +GL+ P TIRV KNLRVCNDCH K ++ + R+I++RD RFH
Sbjct: 782 VLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFH 841
Query: 476 HFENGTCSCGDYW 488
HF NG CSCGDYW
Sbjct: 842 HFRNGQCSCGDYW 854
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 120/254 (47%), Gaps = 12/254 (4%)
Query: 20 TRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRV--K 77
+RL+L+++ G A + D+ N VAS +++ Y H V A +VF V
Sbjct: 282 SRLELLDV----GREMHAYVIKDDELAANSFVASA-LVDMYATHEQVGKARQVFDMVPDS 336
Query: 78 VKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTIVCVLSACSQLGALELGR 136
K W AMI G + G AL LF M+ + P E T+ VL AC++ A
Sbjct: 337 GKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKE 396
Query: 137 WIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHG 196
+H Y+ K + N V AL++MY+R G D A ++F + DV ++N+LI G + G
Sbjct: 397 AVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQG 456
Query: 197 RSIEAVEMFREMIN---QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQI 253
+A ++ REM G+ P +T + +L C+ G EI R + ++ +
Sbjct: 457 HVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVR-HALDTDV 515
Query: 254 EHYGCIVDLLSRVG 267
+VD+ ++ G
Sbjct: 516 AVGSALVDMYAKCG 529
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 125/291 (42%), Gaps = 43/291 (14%)
Query: 1 EGREIHGQVLKLGL--RSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMIN 58
R IH L+ GL R + + L+ Y +CG A+++F + +D V N
Sbjct: 75 SARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSI---SDSAHDAVSFN 131
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVT 118
+ +A +F R W + L L F T
Sbjct: 132 SLI------SALCLFRR--------WDHALAALRAMLAGGHPLTSF-------------T 164
Query: 119 IVCVLSACSQL----GALELGRWIHSYMGKHRIDLNH--IVGGALINMYSRCGDIDKALQ 172
+V VL A S L A+ LGR H++ K+ + H AL++MY+R G + A +
Sbjct: 165 LVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQR 224
Query: 173 VFEEMK--ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
+F DV T+N++++ L G EAV+ +M+ G+RP VTF L ACS
Sbjct: 225 LFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRL 284
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLS---RVGRPEEAYDFITN 278
L+D+G E+ + +D + +VD+ + +VG+ + +D + +
Sbjct: 285 ELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPD 335
>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
Length = 856
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/493 (39%), Positives = 286/493 (58%), Gaps = 38/493 (7%)
Query: 2 GRE-IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
G+E +HG V+K G+ NR + L+++Y + G+ DV
Sbjct: 396 GKEAVHGYVVKRGMAGNRFVQNALMDMYARLGK--------------TDV---------- 431
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR---DNVRPNEV 117
A +F+ V + D V W +I G V G +A A L REMQ+ V PN +
Sbjct: 432 --------ARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAI 483
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T++ +L C+ L A G+ IH Y +H +D + VG AL++MY++CG + + VF+ +
Sbjct: 484 TLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRL 543
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSHGGLVDLG 236
R+ T+N LI MHG EA +F M G RP +VTF+ L ACSH G+VD G
Sbjct: 544 PRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRG 603
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI-MLGSLLSAC 295
++F +M RD+G+EP + C+VD+L R GR +EAY +T+M+ + ++L AC
Sbjct: 604 LQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGAC 663
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
++H + LGE +RLL+ ++ YVLL N Y+++G+W A ++R++M+ GV KEPG
Sbjct: 664 RLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPG 723
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
CS IEV+ IH F+ G+ HP E+++ M+ L + GY+P T VLHD++D +K
Sbjct: 724 CSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAA 783
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
L HSE+LAI +GL+ P TIRV KNLRVCNDCH K ++ + R+I++RD RFH
Sbjct: 784 VLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFH 843
Query: 476 HFENGTCSCGDYW 488
HF NG CSCGDYW
Sbjct: 844 HFRNGQCSCGDYW 856
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 120/254 (47%), Gaps = 12/254 (4%)
Query: 20 TRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRV--K 77
+RL+L+++ G A + D+ N VAS +++ Y H V A +VF V
Sbjct: 284 SRLELLDV----GREMHAYVIKDDELAANSFVASA-LVDMYATHEQVGKARQVFDMVPDS 338
Query: 78 VKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTIVCVLSACSQLGALELGR 136
K W AMI G + G AL LF M+ + P E T+ VL AC++ A
Sbjct: 339 GKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKE 398
Query: 137 WIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHG 196
+H Y+ K + N V AL++MY+R G D A ++F + DV ++N+LI G + G
Sbjct: 399 AVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQG 458
Query: 197 RSIEAVEMFREMIN---QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQI 253
+A ++ REM G+ P +T + +L C+ G EI R + ++ +
Sbjct: 459 HVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVR-HALDTDV 517
Query: 254 EHYGCIVDLLSRVG 267
+VD+ ++ G
Sbjct: 518 AVGSALVDMYAKCG 531
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 125/291 (42%), Gaps = 43/291 (14%)
Query: 1 EGREIHGQVLKLGL--RSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMIN 58
R IH L+ GL R + + L+ Y +CG A+++F + +D V N
Sbjct: 77 SARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSI---SDSAHDAVSFN 133
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVT 118
+ +A +F R W + L L F T
Sbjct: 134 SLI------SALCLFRR--------WDHALAALRAMLAGGHPLTSF-------------T 166
Query: 119 IVCVLSACSQL----GALELGRWIHSYMGKHRIDLNH--IVGGALINMYSRCGDIDKALQ 172
+V VL A S L A+ LGR H++ K+ + H AL++MY+R G + A +
Sbjct: 167 LVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQR 226
Query: 173 VFEEMK--ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
+F DV T+N++++ L G EAV+ +M+ G+RP VTF L ACS
Sbjct: 227 LFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRL 286
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLS---RVGRPEEAYDFITN 278
L+D+G E+ + +D + +VD+ + +VG+ + +D + +
Sbjct: 287 ELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPD 337
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/437 (43%), Positives = 278/437 (63%), Gaps = 2/437 (0%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD--N 111
T +++ Y + G V A VF + K+ V W+AMI +N +AL+LF+ M + N
Sbjct: 222 TTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACN 281
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
PN VT+V +L AC+ L ALE G+ IH Y+ + ++D V ALI MY RCG++
Sbjct: 282 SVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQ 341
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
+VF+ MK+RDV ++NSLI+ MHG +A+++F MI+QG+ P+ ++F+ VL ACSH G
Sbjct: 342 RVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAG 401
Query: 232 LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSL 291
LV+ G +F+SM Y I P +EHY C+VDLL R R EA I +M P + GSL
Sbjct: 402 LVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLIEDMHFEPGPTVWGSL 461
Query: 292 LSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
L +C+IH ++L E+ + L + ++G YVLL++ YA + W EA + ++ G+Q
Sbjct: 462 LGSCRIHCNVELAERASTVLFELEPRNAGNYVLLADIYAEAKLWSEAKSVMKLLEARGLQ 521
Query: 352 KEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDW 411
K PGCS IEV +++ F+ D +PQ E+I+ + +L +K +GY P T VVL+D+++
Sbjct: 522 KLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDLDEE 581
Query: 412 EKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDR 471
EKE + HSE+LA+ +GLI+T TIR+ KNLR+C DCH++ K I+ R+I+VRD
Sbjct: 582 EKERIVLGHSEKLAVAFGLINTAKGETIRIRKNLRLCEDCHAVTKFISKFANREILVRDV 641
Query: 472 NRFHHFENGTCSCGDYW 488
NRFHHF +G CSCGDYW
Sbjct: 642 NRFHHFRDGVCSCGDYW 658
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 103/480 (21%), Positives = 199/480 (41%), Gaps = 75/480 (15%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D +T +IN Y E G ++ A +VF + + W A+ L G LDL+ +M
Sbjct: 112 DPFLATKLINMYYELGSIDRALKVFDETRERTIYVWNALFRALAMVGHGKELLDLYIQMN 171
Query: 109 RDNVRPNEVTIVCVLSAC--SQLGALEL--GRWIHSYMGKHRIDLNHIVGGALINMYSRC 164
+ T VL AC S+L L G+ IH+++ +H + N V L+++Y++
Sbjct: 172 WIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKF 231
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIR--PTKVTFVG 222
G + A VF M ++ +++++IA A + ++A+E+F+ M+ + P VT V
Sbjct: 232 GSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVN 291
Query: 223 VLNACS-----------HG------------------------GLVDLGFEIFQSMTRDY 247
+L AC+ HG G V +G +F +M +
Sbjct: 292 MLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKR- 350
Query: 248 GIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLG 304
+ + ++ + G ++A NM ++P +I ++L AC G ++ G
Sbjct: 351 ----DVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEG 406
Query: 305 EQIAKRLLDCRSADSGT--YVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVN 362
+ + + +L G Y + + + + EA+++ M EPG +
Sbjct: 407 KILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLIEDM-----HFEPGPT----- 456
Query: 363 NEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSE 422
+ +LG R ++ ++ + + +LE + V+L DI K W+ A
Sbjct: 457 --VWGSLLGSCRIHCNVELAERASTV--LFELEPRNAGNYVLLADIYAEAKLWSEAKSVM 512
Query: 423 RLAICYGL----------ISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRN 472
+L GL + K Y+ + V ++ + H+++ ++N K + V N
Sbjct: 513 KLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTN 572
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 9/185 (4%)
Query: 87 MIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHR 146
+I L + G + +AL L P + T ++ +C+Q +L G +H +
Sbjct: 53 LIQSLCKGGNLKQALHLLC----CEPNPTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSG 108
Query: 147 IDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
D + + LINMY G ID+AL+VF+E +ER + +N+L LAM G E ++++
Sbjct: 109 FDQDPFLATKLINMYYELGSIDRALKVFDETRERTIYVWNALFRALAMVGHGKELLDLYI 168
Query: 207 EMINQGIRPTKVTFVGVLNACSHGGL----VDLGFEIFQSMTRDYGIEPQIEHYGCIVDL 262
+M G + T+ VL AC L + G EI + R +G E I ++D+
Sbjct: 169 QMNWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHAHILR-HGYEANIHVMTTLLDV 227
Query: 263 LSRVG 267
++ G
Sbjct: 228 YAKFG 232
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 34/197 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ IHG +L+ L S L+ +YG+CGE ++FD M + DVV+ +I+ Y
Sbjct: 304 QGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKK-RDVVSWNSLISIY 362
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG + +A+ +F M V P+ ++ +
Sbjct: 363 GMHGFGK-------------------------------KAIQIFENMIHQGVSPSYISFI 391
Query: 121 CVLSACSQLGALELGRWI-HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
VL ACS G +E G+ + S + K+RI ++++ R + +A+++ E+M
Sbjct: 392 TVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLIEDMHF 451
Query: 179 ERDVTTYNSLIAGLAMH 195
E T + SL+ +H
Sbjct: 452 EPGPTVWGSLLGSCRIH 468
>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
Length = 854
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/493 (39%), Positives = 286/493 (58%), Gaps = 38/493 (7%)
Query: 2 GRE-IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
G+E +HG V+K G+ NR + L+++Y + G+ DV
Sbjct: 394 GKEAVHGYVVKRGMAGNRFVQNALMDMYARLGK--------------TDV---------- 429
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR---DNVRPNEV 117
A +F+ V + D V W +I G V G +A A L REMQ+ V PN +
Sbjct: 430 --------ARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAI 481
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T++ +L C+ L A G+ IH Y +H +D + VG AL++MY++CG + + VF+ +
Sbjct: 482 TLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRL 541
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSHGGLVDLG 236
R+ T+N LI MHG EA +F M G RP +VTF+ L ACSH G+VD G
Sbjct: 542 PRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRG 601
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI-MLGSLLSAC 295
++F +M RD+G+EP + C+VD+L R GR +EAY +T+M+ + ++L AC
Sbjct: 602 LQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGAC 661
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
++H + LGE +RLL+ ++ YVLL N Y+++G+W A ++R++M+ GV KEPG
Sbjct: 662 RLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPG 721
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
CS IEV+ IH F+ G+ HP E+++ M+ L + GY+P T VLHD++D +K
Sbjct: 722 CSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAA 781
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
L HSE+LAI +GL+ P TIRV KNLRVCNDCH K ++ + R+I++RD RFH
Sbjct: 782 VLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFH 841
Query: 476 HFENGTCSCGDYW 488
HF NG CSCGDYW
Sbjct: 842 HFRNGQCSCGDYW 854
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 120/254 (47%), Gaps = 12/254 (4%)
Query: 20 TRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRV--K 77
+RL+L+++ G A + D+ N VAS +++ Y H V A +VF V
Sbjct: 282 SRLELLDV----GREMHAYVIKDDELAANSFVASA-LVDMYATHEQVGKARQVFDMVPDS 336
Query: 78 VKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTIVCVLSACSQLGALELGR 136
K W AMI G + G AL LF M+ + P E T+ VL AC++ A
Sbjct: 337 GKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKE 396
Query: 137 WIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHG 196
+H Y+ K + N V AL++MY+R G D A ++F + DV ++N+LI G + G
Sbjct: 397 AVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQG 456
Query: 197 RSIEAVEMFREMIN---QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQI 253
+A ++ REM G+ P +T + +L C+ G EI R + ++ +
Sbjct: 457 HVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVR-HALDTDV 515
Query: 254 EHYGCIVDLLSRVG 267
+VD+ ++ G
Sbjct: 516 AVGSALVDMYAKCG 529
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 125/291 (42%), Gaps = 43/291 (14%)
Query: 1 EGREIHGQVLKLGL--RSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMIN 58
R IH L+ GL R + + L+ Y +CG A+++F + +D V N
Sbjct: 75 SARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSI---SDSAHDAVSFN 131
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVT 118
+ +A +F R W + L L F T
Sbjct: 132 SLI------SALCLFRR--------WDHALAALRAMLAGGHPLTSF-------------T 164
Query: 119 IVCVLSACSQL----GALELGRWIHSYMGKHRIDLNH--IVGGALINMYSRCGDIDKALQ 172
+V VL A S L A+ LGR H++ K+ + H AL++MY+R G + A +
Sbjct: 165 LVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQR 224
Query: 173 VFEEMK--ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
+F DV T+N++++ L G EAV+ +M+ G+RP VTF L ACS
Sbjct: 225 LFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRL 284
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLS---RVGRPEEAYDFITN 278
L+D+G E+ + +D + +VD+ + +VG+ + +D + +
Sbjct: 285 ELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPD 335
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/492 (40%), Positives = 281/492 (57%), Gaps = 36/492 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G + HGQ++K G N L++LY KCG M +C
Sbjct: 259 GLQFHGQLIKTGFHQNSHVGSGLIDLYSKCG---------GGMSDCR------------- 296
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGE-MARALDLFREMQRDNVRPNEVTIV 120
+VF + D V W M+ G +N E + AL+ FR+MQ RPN+ + V
Sbjct: 297 ---------KVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFV 347
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHI-VGGALINMYSRCGDIDKALQVFEEMKE 179
CV+SACS L + G+ IHS K I N I V ALI MYS+CG++ A ++F+ M E
Sbjct: 348 CVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAE 407
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+ + NS+IAG A HG +E++ +F+ M+ + I PT +TF+ VL+AC+H G V+ G+
Sbjct: 408 HNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNY 467
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F M + IEP+ EHY C++DLL R G+ EA + I M P I SLL AC+ HG
Sbjct: 468 FNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHG 527
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
++L + A ++L +++ YV+LSN YAS+G+W+E +R M++ GV+K+PGCS I
Sbjct: 528 NIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWI 587
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVL---HDIEDWEKEWA 416
EV IH F+ D HP ++IY+ ++E+ +K GY P L EKE
Sbjct: 588 EVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIR 647
Query: 417 LAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHH 476
L HSE+LA+ +GLISTK + VVKNLR+C DCH+ IK I+ I R+I VRD +RFH
Sbjct: 648 LGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHC 707
Query: 477 FENGTCSCGDYW 488
F+ G CSCGDYW
Sbjct: 708 FKEGQCSCGDYW 719
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 170/367 (46%), Gaps = 47/367 (12%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPE-----------------CNDV--------VASTVMIN 58
L+ Y CGE A+ LF M E C+DV VA + +
Sbjct: 111 LISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFD 170
Query: 59 CYV-----------EHGLVENAFEVFSRVK-VKDTVCWTAMIDGLVRNGEMARALDLFRE 106
YV ++G +++A VF + ++D V W +MI ++ E ++AL LF+E
Sbjct: 171 SYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQE 230
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC-G 165
M R + + T+ VL+A + L L G H + K N VG LI++YS+C G
Sbjct: 231 MVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGG 290
Query: 166 DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIE-AVEMFREMINQGIRPTKVTFVGVL 224
+ +VFEE+ E D+ +N++++G + + +E A+E FR+M G RP +FV V+
Sbjct: 291 GMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVI 350
Query: 225 NACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPD 284
+ACS+ G +I + +I ++ + S+ G ++A M +
Sbjct: 351 SACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMA-EHN 409
Query: 285 HIMLGSLLSACKIHG----KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQ 340
+ L S+++ HG L L + + +R + + S T++ + +A A +G+ +E
Sbjct: 410 TVSLNSMIAGYAQHGIEMESLHLFQWMLERQI---APTSITFISVLSACAHTGRVEEGWN 466
Query: 341 IRAKMKE 347
MKE
Sbjct: 467 YFNMMKE 473
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 130/306 (42%), Gaps = 29/306 (9%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H +K + + + LY KCG A + F ++ + N V + +I Y
Sbjct: 27 GKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN-VFSFNAIIAAYA 85
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ A ++F ++ D V + +I GE A AL LF M+ + + T+
Sbjct: 86 KESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSA 145
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE-R 180
V++AC L +G+ +HS D V AL+ Y + GD+D A +VF M R
Sbjct: 146 VITACCDDVGL-IGQ-LHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIR 203
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------H 229
D ++NS+I H +A+ +F+EM+ +G+ T VL A + H
Sbjct: 204 DEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFH 263
Query: 230 GGLVDLGFEIFQSMTRDYGIEPQIEHYGC-IVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
G L+ GF Q H G ++DL S+ G + PD ++
Sbjct: 264 GQLIKTGFH-------------QNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLW 310
Query: 289 GSLLSA 294
+++S
Sbjct: 311 NTMVSG 316
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 109/273 (39%), Gaps = 70/273 (25%)
Query: 1 EGREIHGQVLKLGLRSNR-STRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINC 59
+G++IH LK + SNR S L+ +Y KCG +DA +LFD M E N V ++ MI
Sbjct: 361 QGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNS-MIAG 419
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
Y +HG+ EM +L LF+ M + P +T
Sbjct: 420 YAQHGI------------------------------EM-ESLHLFQWMLERQIAPTSITF 448
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+ VLSAC+ G +E G W + M K + ++ E
Sbjct: 449 ISVLSACAHTGRVEEG-WNYFNMMKEKFNI-----------------------------E 478
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+ Y+ +I L G+ EA + M P + + +L AC G ++L +
Sbjct: 479 PEAEHYSCMIDLLGRAGKLSEAENLIARM---PFNPGSIGWASLLGACRTHGNIELAVKA 535
Query: 240 FQSMTRDYGIEP-QIEHYGCIVDLLSRVGRPEE 271
+ + +EP Y + ++ + GR EE
Sbjct: 536 ANQVLQ---LEPSNAAPYVVLSNMYASAGRWEE 565
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L C L G+ +HS K I + I +YS+CG + A + F+++ + +
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++N++IA A R + A ++F +Q P V++ +++A + G +F
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLF----DQIPEPDLVSYNTLISAYADCGETAPALGLFS 129
Query: 242 SMTRDYGIE 250
M R+ G++
Sbjct: 130 GM-REMGLD 137
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/492 (38%), Positives = 293/492 (59%), Gaps = 5/492 (1%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
G+ IHG ++ G+ + L+ LY KC ++A +FD +P +V + ++ Y
Sbjct: 462 SGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPH-REVASWNGILTAY 520
Query: 61 VEHGLVENAFEVFS---RVKVK-DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
+ E +FS R +VK D + W+ +I G V+N + A+++FR+MQ +P+E
Sbjct: 521 FTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDE 580
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
TI +L ACS L +G+ IH Y+ +H D + AL++MY++CG + + VF+
Sbjct: 581 TTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDM 640
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
M +DV ++N++I MHG EA+ +F +M+ ++P TF VL+ACSH LV+ G
Sbjct: 641 MPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEG 700
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
+IF SM+RD+ +EP+ EHY C+VD+ SR G EEAY FI M + P I + L+ C+
Sbjct: 701 VQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCR 760
Query: 297 IHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGC 356
++ ++L + AK+L + S YV L N ++ W EA +IR MKE G+ K PGC
Sbjct: 761 VYKNVELAKISAKKLFEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGC 820
Query: 357 SSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWA 416
S V N +H F+ GD + + ++IY + EL +K GY P T+ VLHDI+ EK +
Sbjct: 821 SWFHVGNRVHTFVAGDKSNMESDKIYNFLDELFAKIKAAGYKPDTDYVLHDIDQEEKAES 880
Query: 417 LAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHH 476
L HSE+LA+ +G+++ +TIRV KNLR+C DCH+ IK ++N+ I+VRD RFHH
Sbjct: 881 LCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSNVVGVTIVVRDSLRFHH 940
Query: 477 FENGTCSCGDYW 488
F+NG CSC D+W
Sbjct: 941 FKNGNCSCKDFW 952
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 120/503 (23%), Positives = 208/503 (41%), Gaps = 104/503 (20%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
G+EIHG V++ G+ + V Y KC ++A +FD MP DVV + +CY
Sbjct: 159 SGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPH-RDVVTWNSLSSCY 217
Query: 61 V---------------------------------------------------EHGLVENA 69
V +HG+VEN
Sbjct: 218 VNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENV 277
Query: 70 F-------------------EVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD 110
F VF + ++ + W ++ V G + L++FREM +
Sbjct: 278 FVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLN 337
Query: 111 NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
V+P+ + + +L ACSQL L+ G+ IH + KH + + V AL+N+Y+ C + +A
Sbjct: 338 GVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREA 397
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-- 228
VF+ M R+V T+NSL + G + + +FREM+ G++P VT + +L+ACS
Sbjct: 398 QTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDL 457
Query: 229 ---HGGLVDLGFEIFQSMTRD-YGIEPQIEHYG-CIVDLLSRVGRPEEAYDFITNMKIAP 283
G V GF + M D + + Y C+ V + +D I + ++A
Sbjct: 458 QDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVC-----VREAQVVFDLIPHREVAS 512
Query: 284 DHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRA 343
+ +L + + + L + Q+ + D AD T+ ++ + + +EA++I
Sbjct: 513 WNGILTAYFTNKEYEKGLYMFSQMNR---DEVKADEITWSVVIGGCVKNSRIEEAMEIFR 569
Query: 344 KMKEAGVQKEP--------GCS---SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIV 392
KM+ G + + CS + + EIH ++ RH + + + +
Sbjct: 570 KMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVF---RHWKDWDLARTNALVDMYA 626
Query: 393 KLEGYSPSTEVV----LHDIEDW 411
K G S S V + D+ W
Sbjct: 627 KCGGLSLSRNVFDMMPIKDVFSW 649
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 147/338 (43%), Gaps = 43/338 (12%)
Query: 11 KLGLRSNRSTRLKLVELYGKCGEFKD--------AMQLFDEMPECNDVVASTVMINCYVE 62
K+GL ++ L + + C + +D + M E DV S+ +N Y +
Sbjct: 131 KMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVE--DVFVSSAFVNFYAK 188
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
V A VF + +D V W ++ V G + L++FREM D V+P+ VT+ C+
Sbjct: 189 CLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCI 248
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
LSACS L L+ G+ IH + KH + N V AL+N+Y C + +A VF+ M R+V
Sbjct: 249 LSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNV 308
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH-----GGLVDLGF 237
T+NSL + G + + +FREM G++P + +L ACS G GF
Sbjct: 309 ITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGF 368
Query: 238 EIFQSMTRD-----------------------YGIEPQ--IEHYGCIVDLLSRVGRPEEA 272
+ M D + + P + + + G P++
Sbjct: 369 AVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKG 428
Query: 273 YDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQI 307
+ M + PD + + S+L AC L+ G+ I
Sbjct: 429 LNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVI 466
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 152/346 (43%), Gaps = 42/346 (12%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAM---QLFDEMPEC---NDVVAST 54
E +I+ G++ ++ + + + C +DA+ Q D+ C +DV
Sbjct: 23 EAIKIYTSSRARGIKPDKPVFMAVAK---ACAASRDALKVKQFHDDATRCGVMSDVSIGN 79
Query: 55 VMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP 114
I+ Y + VE A VF + +D V W ++ V G + L++FR+M + V+
Sbjct: 80 AFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKA 139
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
N +T+ +L CS L L+ G+ IH ++ +H + + V A +N Y++C + +A VF
Sbjct: 140 NPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVF 199
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----H 229
+ M RDV T+NSL + G + + +FREM+ G++P VT +L+ACS
Sbjct: 200 DLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLK 259
Query: 230 GGLVDLGFEIFQSMTRDYGIEPQ----------IEHYGCIVDLLS--------------- 264
G GF + M + + + + DL+
Sbjct: 260 SGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYV 319
Query: 265 RVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQI 307
G P++ + M + PD + + S+L AC L+ G+ I
Sbjct: 320 NCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTI 365
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 106/252 (42%), Gaps = 39/252 (15%)
Query: 92 VRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACS-QLGALELGRWIHSYMGKHRIDLN 150
+ +G A+ ++ + ++P++ + V AC+ AL++ ++ H + + +
Sbjct: 16 IPHGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQF-HDDATRCGVMSD 74
Query: 151 HIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
+G A I+ Y +C ++ A +VF+++ RDV T+NSL A G + + +FR+M
Sbjct: 75 VSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGL 134
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDL-------GFEIFQSMTRDYGIEPQIEHY------- 256
++ +T +L CS L DL GF + M D + ++
Sbjct: 135 NKVKANPLTVSSILPGCS--DLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCV 192
Query: 257 ---GCIVDLLS---------------RVGRPEEAYDFITNM---KIAPDHIMLGSLLSAC 295
+ DL+ G P++ + M + PD + + +LSAC
Sbjct: 193 REAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSAC 252
Query: 296 KIHGKLQLGEQI 307
L+ G+ I
Sbjct: 253 SDLQDLKSGKAI 264
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/492 (40%), Positives = 281/492 (57%), Gaps = 36/492 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G + HGQ++K G N L++LY KCG M +C
Sbjct: 259 GLQFHGQLIKTGFHQNSHVGSGLIDLYSKCG---------GGMSDCR------------- 296
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGE-MARALDLFREMQRDNVRPNEVTIV 120
+VF + D V W M+ G +N E + AL+ FR+MQ RPN+ + V
Sbjct: 297 ---------KVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFV 347
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHI-VGGALINMYSRCGDIDKALQVFEEMKE 179
CV+SACS L + G+ IHS K I N I V ALI MYS+CG++ A ++F+ M E
Sbjct: 348 CVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAE 407
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+ + NS+IAG A HG +E++ +F+ M+ + I PT +TF+ VL+AC+H G V+ G+
Sbjct: 408 HNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNY 467
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F M + IEP+ EHY C++DLL R G+ EA + I M P I SLL AC+ HG
Sbjct: 468 FNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHG 527
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
++L + A ++L +++ YV+LSN YAS+G+W+E +R M++ GV+K+PGCS I
Sbjct: 528 NIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWI 587
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVL---HDIEDWEKEWA 416
EV IH F+ D HP ++IY+ ++E+ +K GY P L EKE
Sbjct: 588 EVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIR 647
Query: 417 LAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHH 476
L HSE+LA+ +GLISTK + VVKNLR+C DCH+ IK I+ I R+I VRD +RFH
Sbjct: 648 LGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHC 707
Query: 477 FENGTCSCGDYW 488
F+ G CSCGDYW
Sbjct: 708 FKEGQCSCGDYW 719
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 170/367 (46%), Gaps = 47/367 (12%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPE-----------------CNDV--------VASTVMIN 58
L+ Y CGE A+ LF M E C+DV VA + +
Sbjct: 111 LISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITACCDDVGLIGQLHSVAVSSGFD 170
Query: 59 CYV-----------EHGLVENAFEVFSRVK-VKDTVCWTAMIDGLVRNGEMARALDLFRE 106
YV ++G +++A VF + ++D V W +MI ++ E ++AL LF+E
Sbjct: 171 SYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQE 230
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC-G 165
M R + + T+ VL+A + L L G H + K N VG LI++YS+C G
Sbjct: 231 MVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGG 290
Query: 166 DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIE-AVEMFREMINQGIRPTKVTFVGVL 224
+ +VFEE+ E D+ +N++++G + + +E A+E FR+M G RP +FV V+
Sbjct: 291 GMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVI 350
Query: 225 NACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPD 284
+ACS+ G +I + +I ++ + S+ G ++A M +
Sbjct: 351 SACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMA-EHN 409
Query: 285 HIMLGSLLSACKIHG----KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQ 340
+ L S+++ HG L L + + +R + + S T++ + +A A +G+ +E
Sbjct: 410 TVSLNSMIAGYAQHGIEMESLHLFQWMLERQI---APTSITFISVLSACAHTGRVEEGWN 466
Query: 341 IRAKMKE 347
MKE
Sbjct: 467 YFNMMKE 473
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 130/306 (42%), Gaps = 29/306 (9%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H +K + + + LY KCG A + F ++ + N V + +I Y
Sbjct: 27 GKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN-VFSFNAIIAAYA 85
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ A ++F ++ D V + +I GE A AL LF M+ + + T+
Sbjct: 86 KESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSA 145
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE-R 180
V++AC L +G+ +HS D V AL+ Y + GD+D A +VF M R
Sbjct: 146 VITACCDDVGL-IGQ-LHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIR 203
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------H 229
D ++NS+I H +A+ +F+EM+ +G+ T VL A + H
Sbjct: 204 DEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFH 263
Query: 230 GGLVDLGFEIFQSMTRDYGIEPQIEHYGC-IVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
G L+ GF Q H G ++DL S+ G + PD ++
Sbjct: 264 GQLIKTGFH-------------QNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLW 310
Query: 289 GSLLSA 294
+++S
Sbjct: 311 NTMVSG 316
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 109/273 (39%), Gaps = 70/273 (25%)
Query: 1 EGREIHGQVLKLGLRSNR-STRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINC 59
+G++IH LK + SNR S L+ +Y KCG +DA +LFD M E N V ++ MI
Sbjct: 361 QGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNS-MIAG 419
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
Y +HG+ EM +L LF+ M + P +T
Sbjct: 420 YAQHGI------------------------------EM-ESLHLFQWMLERQIAPTSITF 448
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+ VLSAC+ G +E G W + M K + ++ E
Sbjct: 449 ISVLSACAHTGRVEEG-WNYFNMMKEKFNI-----------------------------E 478
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+ Y+ +I L G+ EA + M P + + +L AC G ++L +
Sbjct: 479 PEAEHYSCMIDLLGRAGKLSEAENLIARM---PFNPGSIGWASLLGACRTHGNIELAVKA 535
Query: 240 FQSMTRDYGIEP-QIEHYGCIVDLLSRVGRPEE 271
+ + +EP Y + ++ + GR EE
Sbjct: 536 ANQVLQ---LEPSNAAPYVVLSNMYASAGRWEE 565
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L C L G+ +HS K I + I +YS+CG + A + F+++ + +
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++N++IA A R + A ++F +Q P V++ +++A + G +F
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLF----DQIPEPDLVSYNTLISAYADCGETAPALGLFS 129
Query: 242 SMTRDYGIE 250
M R+ G++
Sbjct: 130 GM-REMGLD 137
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/484 (38%), Positives = 300/484 (61%), Gaps = 3/484 (0%)
Query: 8 QVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQL---FDEMPECNDVVASTVMINCYVEHG 64
+++K ++ + T + L+ + + G+ +L +M +++V S +++ Y + G
Sbjct: 406 KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCG 465
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
+ ++ +VF +K +D + W +I V + + L + M+ + V P+ T++ +L
Sbjct: 466 EMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILP 525
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
CS L A G+ IH + K ++ + VG LI MYS+CG + + QVF+ MK +DV T
Sbjct: 526 VCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVT 585
Query: 185 YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT 244
+ +LI+ M+G +AV F EM GI P V FV ++ ACSH GLV+ G F M
Sbjct: 586 WTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMK 645
Query: 245 RDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLG 304
+DY IEP+IEHY C+VDLLSR ++A DFI +M + PD + G+LLSAC++ G ++
Sbjct: 646 KDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIA 705
Query: 305 EQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNE 364
E++++R+++ D+G YVL+SN YA+ GKW + IR +K G++K+PGCS +E+ N+
Sbjct: 706 ERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNK 765
Query: 365 IHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERL 424
++ F G Q E++ K + L ++ EGY + + VLHDI++ EK L HSERL
Sbjct: 766 VYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERL 825
Query: 425 AICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSC 484
AI +GL++TKP T ++V+KNLRVC DCH++ K I+ I +R+++VRD NRFH F++G CSC
Sbjct: 826 AIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDANRFHVFKDGACSC 885
Query: 485 GDYW 488
GDYW
Sbjct: 886 GDYW 889
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 150/334 (44%), Gaps = 36/334 (10%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTV-CWTAMIDGLVRNGEMARALDLFRE 106
+ V+ S +I Y ++F VF + V W ++I L NG + AL L+ E
Sbjct: 46 HSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSE 105
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
QR ++P+ T V++AC+ L E+ + IH + + +G ALI+MY R D
Sbjct: 106 TQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFND 165
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+DKA +VFEEM RDV ++NSLI+G +G EA+E++ N G+ P T VL A
Sbjct: 166 LDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRA 225
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQI-------------------------------EH 255
C G V+ G +I + GI+ +
Sbjct: 226 CGGLGSVEEG-DIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVS 284
Query: 256 YGCIVDLLSRVGRPEEAYDFITNM--KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
+ ++ S+VG EE+ M + PD + + S+L AC G L+ G+ + ++
Sbjct: 285 WNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMIT 344
Query: 314 C-RSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
D+ +L N YA G + ++ + MK
Sbjct: 345 SGYECDTTASNILINMYAKCGNLLASQEVFSGMK 378
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 193/435 (44%), Gaps = 29/435 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFD---EMPECNDVVASTVMI 57
E ++ + ++ L+ + T ++ +F+ A + D +M +D+ +I
Sbjct: 98 EALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALI 157
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y ++ A +VF + ++D V W ++I G NG AL+++ + V P+
Sbjct: 158 DMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSY 217
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T+ VL AC LG++E G IH + K I + IV L++MY + + ++F++M
Sbjct: 218 TMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKM 277
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
RD ++N++I G + G E++++F EM+NQ +P +T +L AC H G ++ G
Sbjct: 278 VLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGK 336
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
+ M G E ++++ ++ G + + + MK D + S+++
Sbjct: 337 YVHDYMITS-GYECDTTASNILINMYAKCGNLLASQEVFSGMK-CKDSVSWNSMINVYIQ 394
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
+G ++ K + DS TYV+L + G ++ + + G S
Sbjct: 395 NGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFN-----S 449
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
+I V+N + + +Y K E+ +K+ + DI W A
Sbjct: 450 NIVVSNTLVD-------------MYAKCGEMGDSLKV-----FENMKARDIITWNTIIAS 491
Query: 418 AIHSERLAICYGLIS 432
+HSE + +IS
Sbjct: 492 CVHSEDCNLGLRMIS 506
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 34/200 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+EIHG + KLGL S+ L+E+Y KCG +++ Q+F M
Sbjct: 535 QGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLM---------------- 578
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
K KD V WTA+I GE +A+ F EM+ + P+ V V
Sbjct: 579 ----------------KTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFV 622
Query: 121 CVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
++ ACS G +E G + H ++I+ ++++ SR +DKA M
Sbjct: 623 AIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPL 682
Query: 180 R-DVTTYNSLIAGLAMHGRS 198
+ D + + +L++ M G +
Sbjct: 683 KPDSSIWGALLSACRMSGDT 702
>gi|449449673|ref|XP_004142589.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g50990-like [Cucumis sativus]
Length = 628
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/488 (39%), Positives = 289/488 (59%), Gaps = 8/488 (1%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMINCY 60
E H +++K G + + LV Y + G QL D + C+ D+VA ++I +
Sbjct: 146 ETHARIIKFGYGNYPTLIASLVSTYQRVGCLNRVHQLLDIL--CSKQLDLVAMNLLIGNF 203
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++ G + A +VF ++ +D V W ++I G V+N A FR+M N++P+ T
Sbjct: 204 MKIGECKFAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFA 263
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L+AC+QLGA W+H+ M + +I+LN ++ ALI+ YS+CG I A ++F +
Sbjct: 264 SILNACAQLGAPSNTHWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHS 323
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D + +N +I GLA+HG +++A+ +F M ++ + P +TF+GVL AC+HG L+D G F
Sbjct: 324 DTSVWNVMIKGLAIHGLAMDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYF 383
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ M Y I+PQ+EHYG +VDL SR G EEAY I M I PD + +LLS C+I+
Sbjct: 384 ELMKSHYSIQPQLEHYGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKN 443
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+L E + + SG YVLLSN Y S +WKEA +R MK V+K+ G S IE
Sbjct: 444 HKLAEVA---IANMSQRKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIE 500
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+ I F GD HP+ + I K + L + + EGY P TE+V DI + EKE L+ H
Sbjct: 501 LGGTIQHFKSGDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFH 560
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE++A+ Y ++ T P I + KNLR+C+DCH+ IKL++ + R I+VRDR RFH FE G
Sbjct: 561 SEKMALAYAILKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGG 620
Query: 481 TCSCGDYW 488
CSCGD W
Sbjct: 621 MCSCGDRW 628
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/488 (39%), Positives = 298/488 (61%), Gaps = 8/488 (1%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
R++H Q G+ N KLV Y DA LFD M D V+ +VM+ + +
Sbjct: 380 RQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMC-VRDSVSWSVMVGGFAK 438
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDG--LVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G N F F ++ + A D L G +L LF +M+ + V P++V +V
Sbjct: 439 VGDYMNCFGTF-----RELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMV 493
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+ AC++LGA+ R I Y+ + + L+ I+G A+I+M+++CG ++ A ++F+ M+E+
Sbjct: 494 TVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEK 553
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+V +++++IA HG+ +A+++F M+ GI P K+T V +L ACSH GLV+ G F
Sbjct: 554 NVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFF 613
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
M DY + ++HY C+VDLL R GR +EA I +M + D + G+ L AC+ H
Sbjct: 614 SLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKD 673
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+ L E+ A LL+ + + G Y+LLSN YA++G+W++ + R M + ++K PG + IE
Sbjct: 674 VVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIE 733
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
V+N+ H+F +GD HP+ ++IY+ ++ L ++L GY P T VLHD+++ K L H
Sbjct: 734 VDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSH 793
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI +GLI+T +T IR++KNLRVC DCH+ KL++ IT R IIVRD NRFHHF+ G
Sbjct: 794 SEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEG 853
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 854 ACSCGDYW 861
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 123/199 (61%), Gaps = 1/199 (0%)
Query: 30 KCGEFKDAMQLFDEMPECNDVV-ASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMI 88
+CG D L + C D+ +++ YV+ +E+A +F +++ +D V WT MI
Sbjct: 172 RCGARPDNYTLPFVIRACRDLKNLQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMI 231
Query: 89 DGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRID 148
G G+ +L LF +M+ + V P++V +V V+ AC++LGA+ R I Y+ + +
Sbjct: 232 GGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQ 291
Query: 149 LNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM 208
L+ I+G A+I+MY++CG ++ A ++F+ M+E++V +++++IA HG+ +A+++FR M
Sbjct: 292 LDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMM 351
Query: 209 INQGIRPTKVTFVGVLNAC 227
++ G+ P K+T +L AC
Sbjct: 352 LSSGMLPDKITLASLLYAC 370
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 145/305 (47%), Gaps = 14/305 (4%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV+ T MI+ Y + G VE+A E+F R++ K+ + W+AMI +G+ +ALDLFR M
Sbjct: 293 DVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMML 352
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ P+++T+ +L AC L R +H+ H + N IV L++ YS +D
Sbjct: 353 SSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALD 412
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +F+ M RD +++ ++ G A G + FRE+I G RP T NA
Sbjct: 413 DAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNA-- 470
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAY---DFITNMKIAPDH 285
+ +F M R+ G+ P +V +++G +A D+I K D
Sbjct: 471 -----NESLVLFDKM-REEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDV 524
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
I+ +++ G ++ +I R+ + ++ + AY G+ ++A+ + M
Sbjct: 525 ILGTAMIDMHAKCGCVESAREIFDRM---EEKNVISWSAMIAAYGYHGQGRKALDLFPMM 581
Query: 346 KEAGV 350
+G+
Sbjct: 582 LRSGI 586
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 125/252 (49%), Gaps = 23/252 (9%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
++V + +I Y + +++A+ +F + V+D+V W+ M+ G + G+ FRE+
Sbjct: 112 NIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELI 171
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
R RP+ T+ V+ AC L L++ AL++MY +C +I+
Sbjct: 172 RCGARPDNYTLPFVIRACRDLKNLQM---------------------ALVDMYVKCREIE 210
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +F++M+ERD+ T+ +I G A G++ E++ +F +M +G+ P KV V V+ AC+
Sbjct: 211 DARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACA 270
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
G + I + + + ++D+ ++ G E A + M+ + I
Sbjct: 271 KLGAMHKA-RIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRME-EKNVISW 328
Query: 289 GSLLSACKIHGK 300
++++A HG+
Sbjct: 329 SAMIAAYGYHGQ 340
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 105/261 (40%), Gaps = 36/261 (13%)
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
R N + L C L + R +H+ H + N +V LI YS +D A
Sbjct: 78 RLNPKFYISALVNCRNLTQV---RQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYG 134
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS---- 228
+F+ M RD +++ ++ G A G I FRE+I G RP T V+ AC
Sbjct: 135 LFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKN 194
Query: 229 -HGGLVDLGFE---------IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITN 278
LVD+ + +F M E + + ++ + G+ E+
Sbjct: 195 LQMALVDMYVKCREIEDARFLFDKMQ-----ERDLVTWTVMIGGYAECGKANESLVLFEK 249
Query: 279 MK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD--CRSADSGTYVLLSNA----Y 329
M+ + PD + + +++ AC +LG R++D + V+L A Y
Sbjct: 250 MREEGVVPDKVAMVTVVFACA-----KLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMY 304
Query: 330 ASSGKWKEAVQIRAKMKEAGV 350
A G + A +I +M+E V
Sbjct: 305 AKCGCVESAREIFDRMEEKNV 325
>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
Length = 615
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/491 (37%), Positives = 293/491 (59%), Gaps = 3/491 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPEC---NDVVASTVMI 57
E ++ ++ + G +R LK ++ G ++ C +D+V + +I
Sbjct: 125 EAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAII 184
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
N Y + G + AF VF+R+ K+ + W+ MI +N AL F+ MQ++ + + +
Sbjct: 185 NMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRI 244
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T V VL A + +GALELG+ +H + +D + +VG L+NMY +CG D A VF+ M
Sbjct: 245 TYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSM 304
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
E++V ++N+++A +GRS EA+ +F M +G+RP +TFV +L CSH G
Sbjct: 305 VEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAV 364
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F M +D+GI P+ H+GC++D+L R G+ EEA + I M + D ++ SLL AC
Sbjct: 365 SHFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLLCACVT 424
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
H + A+ + Y++LSN YA+ KW EA ++R +M++AGV+K+ G S
Sbjct: 425 HKDEDRAARAAEEAFQREPRCAAAYIMLSNLYAALKKWDEAAKVRKRMEQAGVRKQAGRS 484
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IE++ ++HEF+ GD HP + +I+K +Q L ++++GY P +VV+H +E+ EK+ L
Sbjct: 485 WIEIDKQVHEFVAGDSIHPDKSRIFKTLQRLMSEMRIKGYEPDRKVVIHSMEEEEKDEVL 544
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LA+ +G+ ST P T + +VKNLRVC+DCHS IK I+ + R+I VRD NRFHHF
Sbjct: 545 FYHSEKLAVAFGIASTPPRTPLCIVKNLRVCSDCHSAIKFISGVEGRRITVRDSNRFHHF 604
Query: 478 ENGTCSCGDYW 488
+ G CSCGDYW
Sbjct: 605 DRGECSCGDYW 615
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 168/348 (48%), Gaps = 35/348 (10%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR IH + L R LV++YGKCG +A ++FD M N
Sbjct: 59 EGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKN------------ 106
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
VFS WT ++ G V++G A+ LF M ++ P+ V ++
Sbjct: 107 -----------VFS---------WTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALL 146
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+ +C AL GR IHS +D + + A+INMY +CG I +A VF M E+
Sbjct: 147 KFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEK 206
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+V +++++IA + + EA+ F+ M +G+ ++T+V VL+A + G ++LG +
Sbjct: 207 NVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALH 266
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ G++ I +V++ + G P++A D +M + + + ++L+A +G+
Sbjct: 267 VRIVY-AGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSM-VEKNVVSWNAMLAAYGQNGR 324
Query: 301 LQLGEQIAKRL-LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+ + + L+ + T+V + + SGK+K+AV +M++
Sbjct: 325 SREALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVSHFVEMRQ 372
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 116/242 (47%), Gaps = 10/242 (4%)
Query: 126 CSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTY 185
C+ ALE GR IH +M +D + L++MY +CG + +A +VF+ M+ ++V ++
Sbjct: 51 CAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKNVFSW 110
Query: 186 NSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR 245
L+AG GR +EA+++F M +G P +V + +++C + G EI S
Sbjct: 111 TMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREI-HSAAA 169
Query: 246 DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGE 305
G++ + I+++ + G EA+ T M +++ S + A +L
Sbjct: 170 SCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMP--EKNVISWSTMIAAFCQNELADEA 227
Query: 306 QIAKRLL--DCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNN 363
+ +L+ + D TYV + +AY S G + + ++ AG+ +SI V N
Sbjct: 228 LLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLD-----TSIVVGN 282
Query: 364 EI 365
+
Sbjct: 283 TL 284
>gi|224122234|ref|XP_002318784.1| predicted protein [Populus trichocarpa]
gi|222859457|gb|EEE97004.1| predicted protein [Populus trichocarpa]
Length = 511
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/486 (40%), Positives = 293/486 (60%), Gaps = 4/486 (0%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN-DVVASTVMINCYVE 62
+IH +++ ++ S L+ Y C ++ D++ + D+V ++I+ +
Sbjct: 29 KIHSRIITFSYGTSPSLMASLMLKYVHCNCRSIVYKVIDQVFCWSIDLVELNLIIDKLMR 88
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
A VF++++ +D V W MI G VR AL LFR M + NV P++ T V
Sbjct: 89 TENYRVAKMVFNKMRARDVVTWNTMIGGYVRKARFEEALRLFRFMNKSNVEPDKYTFASV 148
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
++ C++LGAL+ +W+H + + RI+LN I+ ALI+MYS+CG I A ++F+ ++ +V
Sbjct: 149 INGCAKLGALKHAQWVHELLIEKRIELNFILSSALIDMYSKCGKIQTAKEIFDGVQRNNV 208
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
+N++I+GLA+HG +++A+++F +M + + P +TF+G+L ACSH GLV G + F
Sbjct: 209 CIWNAMISGLAVHGLALDAIKVFTKMEVENVLPDAITFLGILTACSHCGLVKEGRKYFDL 268
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
M Y ++P IEHYG +VDLL R G EEA+ I +M + PD ++ +LL AC+ + K +
Sbjct: 269 MRSRYSVQPHIEHYGAMVDLLGRAGLLEEAFAMIKSMPMEPDVVIWRALLGACRTYKKPE 328
Query: 303 LGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVN 362
LGE + RS D YVLLSN Y S +W A + MK+ GV K G S E
Sbjct: 329 LGEAAMANISRLRSGD---YVLLSNIYCSQKRWDTAQGVWEMMKKKGVHKVRGKSCFEWA 385
Query: 363 NEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSE 422
+H F GD HP+ E IYK ++ L Q KL GY P+T++V D+ + EKE L HSE
Sbjct: 386 GFLHPFKAGDRSHPETEAIYKMLEGLIQRTKLAGYVPTTDLVTMDVSEEEKEGNLYHHSE 445
Query: 423 RLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTC 482
+LA+ YG++ T +R+ KNLR+C DCHS IK+++ + R IIVRDR RFH FENG C
Sbjct: 446 KLALAYGILKTTSGAEVRISKNLRICYDCHSWIKIVSRLLSRVIIVRDRIRFHRFENGLC 505
Query: 483 SCGDYW 488
SCGDYW
Sbjct: 506 SCGDYW 511
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/483 (39%), Positives = 283/483 (58%), Gaps = 4/483 (0%)
Query: 9 VLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMINCYVEHGL 65
+LK + N T L++ G + Q+ +C DV + +++ Y G
Sbjct: 143 MLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGK 202
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
++ A VF ++ K+ V W A+I G R G+ AL F EM R+ T V S+
Sbjct: 203 MDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSS 262
Query: 126 CSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTY 185
++LGALE G+W+H+++ K R L VG L++MY++ G + A +VF+ + +D+ T+
Sbjct: 263 IARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTW 322
Query: 186 NSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR 245
NS++ A +G EAV F EM G+ ++TF+ +L ACSHGGLV G F+ M +
Sbjct: 323 NSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFE-MMK 381
Query: 246 DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGE 305
+Y +EP+I+HY +V LL R G A FI M + P + G+LL+AC++H ++G+
Sbjct: 382 EYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQ 441
Query: 306 QIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEI 365
A + + DSG VLL N YAS+G+W A ++R MK GV+KEP CS +E+ N +
Sbjct: 442 FAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRMMMKTTGVKKEPACSWVEMENSV 501
Query: 366 HEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLA 425
H F+ D HPQ E+IYK E+ + ++ EGY P + VL ++D EKE L HSE+LA
Sbjct: 502 HMFVANDDTHPQAEEIYKMWGEISKKIRKEGYVPDMDYVLLHVDDQEKEANLQYHSEKLA 561
Query: 426 ICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCG 485
+ + LI TIR++KN+R+C DCHS K I+ + R+I+VRD NRFHHF +G+CSCG
Sbjct: 562 LAFALIEMPAGATIRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNRFHHFSSGSCSCG 621
Query: 486 DYW 488
DYW
Sbjct: 622 DYW 624
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 146/316 (46%), Gaps = 19/316 (6%)
Query: 47 CNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
D +I+ Y + V +A VF +++ KD V WT++I G +N A+ L
Sbjct: 83 AGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPG 142
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M + +PN T +L A GR IH+ K + VG AL++MY+RCG
Sbjct: 143 MLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGK 202
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+D A VF+++ ++ ++N+LI+G A G A+ F EM+ G T T+ V ++
Sbjct: 203 MDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSS 262
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHY--GCIVDLLSRVGRPEEA---YDFITNMKI 281
+ G ++ G + + + ++ + ++D+ ++ G +A +D + N
Sbjct: 263 IARLGALEQGKWVHAHVIKS---RQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDN--- 316
Query: 282 APDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSA----DSGTYVLLSNAYASSGKWKE 337
D + S+L+A +G LG++ + R + + T++ + A + G KE
Sbjct: 317 -KDLVTWNSMLTAFAQYG---LGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKE 372
Query: 338 AVQIRAKMKEAGVQKE 353
+ MKE ++ E
Sbjct: 373 GKRYFEMMKEYDLEPE 388
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 114/256 (44%), Gaps = 15/256 (5%)
Query: 99 RALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALI 158
R LDL + + P ++AC+Q LE R IH+++G R + + +LI
Sbjct: 37 RDLDL---LDAGELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLI 93
Query: 159 NMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKV 218
+MY +C + A VF++M+ +D+ ++ SLIAG A + +EA+ + M+ +P
Sbjct: 94 HMYCKCRSVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGF 153
Query: 219 TFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITN 278
TF +L A G +I ++ G + ++D+ +R G+ + A
Sbjct: 154 TFASLLKAAGAYADSGTGRQI-HALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDK 212
Query: 279 MKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYAS------- 331
+ + + + +L+S G + +L R+ T+ S+ ++S
Sbjct: 213 LD-SKNGVSWNALISGFARKGDGESALMTFAEML--RNGFEATHFTYSSVFSSIARLGAL 269
Query: 332 -SGKWKEAVQIRAKMK 346
GKW A I+++ K
Sbjct: 270 EQGKWVHAHVIKSRQK 285
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 89/198 (44%), Gaps = 37/198 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ +H V+K + L+++Y K G DA ++FD + + D+V M+ +
Sbjct: 271 QGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRV-DNKDLVTWNSMLTAF 329
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++GL + A+ F EM++ V N++T +
Sbjct: 330 AQYGLGK-------------------------------EAVSHFEEMRKSGVYLNQITFL 358
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRI--DLNHIVGGALINMYSRCGDIDKALQ-VFEEM 177
C+L+ACS G ++ G+ M ++ + +++H V ++ + R G ++ AL +F+
Sbjct: 359 CILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHYV--TVVALLGRAGLLNYALVFIFKMP 416
Query: 178 KERDVTTYNSLIAGLAMH 195
E + +L+A MH
Sbjct: 417 MEPTAAVWGALLAACRMH 434
>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
Length = 702
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/493 (39%), Positives = 286/493 (58%), Gaps = 38/493 (7%)
Query: 2 GRE-IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
G+E +HG V+K G+ NR + L+++Y + G+ DV
Sbjct: 242 GKEAVHGYVVKRGMAGNRFVQNALMDMYARLGK--------------TDV---------- 277
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR---DNVRPNEV 117
A +F+ V + D V W +I G V G +A A L REMQ+ V PN +
Sbjct: 278 --------ARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAI 329
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T++ +L C+ L A G+ IH Y +H +D + VG AL++MY++CG + + VF+ +
Sbjct: 330 TLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRL 389
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSHGGLVDLG 236
R+ T+N LI MHG EA +F M G RP +VTF+ L ACSH G+VD G
Sbjct: 390 PRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRG 449
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI-MLGSLLSAC 295
++F +M RD+G+EP + C+VD+L R GR +EAY +T+M+ + ++L AC
Sbjct: 450 LQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGAC 509
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
++H + LGE +RLL+ ++ YVLL N Y+++G+W A ++R++M+ GV KEPG
Sbjct: 510 RLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPG 569
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
CS IEV+ IH F+ G+ HP E+++ M+ L + GY+P T VLHD++D +K
Sbjct: 570 CSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAA 629
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
L HSE+LAI +GL+ P TIRV KNLRVCNDCH K ++ + R+I++RD RFH
Sbjct: 630 VLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFH 689
Query: 476 HFENGTCSCGDYW 488
HF NG CSCGDYW
Sbjct: 690 HFRNGQCSCGDYW 702
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 127/266 (47%), Gaps = 8/266 (3%)
Query: 52 ASTVMINCYVEHGLVENAFEVFSRVKVK--DTVCWTAMIDGLVRNGEMARALDLFREMQR 109
A +++ Y GLV +A +F+ D V W M+ LV++G A+ +M
Sbjct: 53 AFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVA 112
Query: 110 DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGK-HRIDLNHIVGGALINMYSRCGDID 168
VRP+ VT L ACS+L L++GR +H+Y+ K + N V AL++MY+ +
Sbjct: 113 LGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVG 172
Query: 169 KALQVFEEMKE--RDVTTYNSLIAGLAMHGRSIEAVEMFREM-INQGIRPTKVTFVGVLN 225
KA QVF+ + + + + +N++I G A G EA+ +F M G P + T VL
Sbjct: 173 KARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLP 232
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDH 285
AC+ G E G+ ++D+ +R+G+ + A + + PD
Sbjct: 233 ACARSEAF-AGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDL-PDV 290
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRL 311
+ +L++ C + G + Q+A+ +
Sbjct: 291 VSWNTLITGCVVQGHVADAFQLAREM 316
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 120/254 (47%), Gaps = 12/254 (4%)
Query: 20 TRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRV--K 77
+RL+L+++ G A + D+ N VAS +++ Y H V A +VF V
Sbjct: 130 SRLELLDV----GREMHAYVIKDDELAANSFVASA-LVDMYATHEQVGKARQVFDMVPDS 184
Query: 78 VKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTIVCVLSACSQLGALELGR 136
K W AMI G + G AL LF M+ + P E T+ VL AC++ A
Sbjct: 185 GKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKE 244
Query: 137 WIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHG 196
+H Y+ K + N V AL++MY+R G D A ++F + DV ++N+LI G + G
Sbjct: 245 AVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQG 304
Query: 197 RSIEAVEMFREMIN---QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQI 253
+A ++ REM G+ P +T + +L C+ G EI R + ++ +
Sbjct: 305 HVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVR-HALDTDV 363
Query: 254 EHYGCIVDLLSRVG 267
+VD+ ++ G
Sbjct: 364 AVGSALVDMYAKCG 377
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 11/175 (6%)
Query: 115 NEVTIVCVLSACSQL----GALELGRWIHSYMGKHRIDLNH--IVGGALINMYSRCGDID 168
T+V VL A S L A+ LGR H++ K+ + H AL++MY+R G +
Sbjct: 9 TSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVA 68
Query: 169 KALQVFEEMK--ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
A ++F DV T+N++++ L G EAV+ +M+ G+RP VTF L A
Sbjct: 69 DAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPA 128
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLS---RVGRPEEAYDFITN 278
CS L+D+G E+ + +D + +VD+ + +VG+ + +D + +
Sbjct: 129 CSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPD 183
>gi|77553572|gb|ABA96368.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 605
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/465 (39%), Positives = 279/465 (60%), Gaps = 23/465 (4%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
L+ ++ +CG ++FD + D+ A +++ Y +R++ +D C
Sbjct: 164 LLGVFARCGRIASCRRVFDRIAH-PDLPAWNALLSAY-------------ARLRARDVAC 209
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
T+ D + L+LF M + PNE+T+V V+ AC +LGA+ G W H+Y
Sbjct: 210 ATSAADAI---------LELFVRMLSLAIEPNEITLVAVIGACGELGAVSHGVWAHTYAV 260
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
K R+ +N IV AL+ MY+ CG +D A QVF +RD YN+++ GLA+HG A+
Sbjct: 261 KRRLAVNCIVATALVEMYAGCGRLDLAEQVFAAASDRDTRCYNAMLHGLAVHGHGRAALS 320
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
+ M G+ VT + V+ AC+H GLVD G + F M ++GIEP+IEHYGC++D+L
Sbjct: 321 LLDRMHGAGVPVDGVTVLSVMCACAHAGLVDEGLDYFDRMEIEFGIEPRIEHYGCMIDML 380
Query: 264 SRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV 323
SR GR A I M I P+ + SL+ AC IHGKL+LGE++ L+ DSG +V
Sbjct: 381 SRAGRLNNAEKLIHEMLIVPNAAIYRSLIRACGIHGKLELGEKMIAELMRLEPDDSGNHV 440
Query: 324 LLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYK 383
L+SN YA + +W++A + R +MK G+ K PG S +++N +HEF++GD HP ++IY
Sbjct: 441 LISNFYARTNRWEDAKKARKEMKSMGIDKNPGSSLVDINGVLHEFLVGDKTHPASKEIYT 500
Query: 384 KMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVK 443
++E++ + G ST L D+E+ +K L+ HSERLAI + LI++ P IR++K
Sbjct: 501 MVEEIETRLIECGRRSSTSSALFDVEEEDKADTLSYHSERLAIAFALIASNPGAPIRIIK 560
Query: 444 NLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
NLRVC DCH KL++ + R+I++RDR RFHHF +G CSCGD+W
Sbjct: 561 NLRVCADCHESAKLVSRVYGREIVMRDRTRFHHFRDGVCSCGDFW 605
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 103/258 (39%), Gaps = 45/258 (17%)
Query: 103 LFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYS 162
LF +RPN T + A AL L ++G H + ++G AL+ +++
Sbjct: 110 LFLSSSPPLLRPNAFTYPPLFRAAPPALALALATHSVKFLGAHAASCDRVLGAALLGVFA 169
Query: 163 RCGDIDKALQVFEEMKERDVTTYNSLIAGLA-MHGRSIEA--------VEMFREMINQGI 213
RCG I +VF+ + D+ +N+L++ A + R + +E+F M++ I
Sbjct: 170 RCGRIASCRRVFDRIAHPDLPAWNALLSAYARLRARDVACATSAADAILELFVRMLSLAI 229
Query: 214 RPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAY 273
P ++T V V+ AC G V G A+
Sbjct: 230 EPNEITLVAVIGACGELGAVSHGV---------------------------------WAH 256
Query: 274 DFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSG 333
+ ++A + I+ +L+ G+L L EQ+ D D+ Y + + A G
Sbjct: 257 TYAVKRRLAVNCIVATALVEMYAGCGRLDLAEQVFAAASD---RDTRCYNAMLHGLAVHG 313
Query: 334 KWKEAVQIRAKMKEAGVQ 351
+ A+ + +M AGV
Sbjct: 314 HGRAALSLLDRMHGAGVP 331
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/440 (42%), Positives = 272/440 (61%), Gaps = 3/440 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D+ ++ YV G V+ A ++F + K + W AMI G +NG LDL+R+M+
Sbjct: 193 DLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKME 252
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ P+ VT+V VLS+C+ LGA GR + + N + ALINMY+RCG++
Sbjct: 253 FTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLV 312
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
KA +F+ M E++V ++ ++IAG MHG+ AV++F EMI+ P FV VL+ACS
Sbjct: 313 KARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACS 372
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GL + G F +M RDYG++P EHY C+VDLL R GR EEA I +M + PD +
Sbjct: 373 HAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVW 432
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
G+LL ACKIH ++L E +++++ + G YVLLSN ++ +G + +++R M+E
Sbjct: 433 GALLGACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRER 492
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
++KEPGCS +E IH F+ GD HPQ ++IY + L+ I+K G S + +
Sbjct: 493 KLKKEPGCSYVEYQGRIHLFLAGDRTHPQAQEIYHMLDGLEDIIKRRGGSNDND---QES 549
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
+ E + +HSE+LAI +GLI+T+P T I V+KNLRVC DCH +KL++ I R+++V
Sbjct: 550 RNEELITGMGVHSEKLAIAFGLINTEPGTEITVIKNLRVCGDCHLFLKLVSEIVDRQLVV 609
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD RFHHF+NG CSC DYW
Sbjct: 610 RDATRFHHFKNGVCSCKDYW 629
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 175/359 (48%), Gaps = 42/359 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++HG V+K G + L+ +Y KC A ++FDE ++
Sbjct: 75 GSQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNL----------- 123
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
VC+ A+I G N + A+ LFR+M+++ V N VT++
Sbjct: 124 -------------------AVCYNALIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLG 164
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
++ C+ L G +H+ + +D + VG L+ MY RCG +D A ++F+ M E+
Sbjct: 165 LIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKG 224
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ T+N++I+G A +G + ++++R+M GI P VT VGVL++C+H G G E+ Q
Sbjct: 225 LITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQ 284
Query: 242 SM-TRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACKI 297
+ +G P +++ ++++ +R G +A +D +T + I ++++ +
Sbjct: 285 RIELSGFGFNPFLKN--ALINMYARCGNLVKARAIFDGMTEKNV----ISWTAIIAGYGM 338
Query: 298 HGKLQLGEQIAKRLLDCRS-ADSGTYVLLSNAYASSGKWKEAVQIRAKM-KEAGVQKEP 354
HG+ +L Q+ ++ D +V + +A + +G ++ + M ++ G+Q P
Sbjct: 339 HGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGP 397
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 127/308 (41%), Gaps = 40/308 (12%)
Query: 81 TVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHS 140
T W A + L R AL+L+ +M PN T +C+ L G +H
Sbjct: 21 TASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHG 80
Query: 141 YMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE-MKERDVTT-YNSLIAGLAMHGRS 198
++ K + V +LI+MY +C I A +VF+E R++ YN+LIAG +++ R
Sbjct: 81 HVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRF 140
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI-FQSMTRDYGIEPQIEHYG 257
+AV +FR+M +G+ VT +G++ C+ G + LGF + + +G++ +
Sbjct: 141 SDAVLLFRQMRKEGVSVNAVTMLGLIPVCA--GPIHLGFGTSLHACSVRFGLDGDLSVGN 198
Query: 258 CIVDLLSRVGRPEEAYDFITNMK----------------------------------IAP 283
C++ + R G + A M I P
Sbjct: 199 CLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVP 258
Query: 284 DHIMLGSLLSACKIHGKLQLGEQIAKRL-LDCRSADSGTYVLLSNAYASSGKWKEAVQIR 342
D + L +LS+C G G ++ +R+ L + L N YA G +A I
Sbjct: 259 DPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIF 318
Query: 343 AKMKEAGV 350
M E V
Sbjct: 319 DGMTEKNV 326
>gi|297851626|ref|XP_002893694.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339536|gb|EFH69953.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/489 (38%), Positives = 300/489 (61%), Gaps = 33/489 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG++IHG V KLGL ++ + L+ +YG+CGE + ++STV
Sbjct: 151 EGKQIHGHVFKLGLEADVFVQNSLINMYGRCGEME---------------LSSTV----- 190
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTI 119
F +++ K W++M V G + L LFREM R+ N++ E +
Sbjct: 191 ------------FEKLEFKSAASWSSMFSACVGMGMWSECLMLFREMCRETNLKAEESGM 238
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V LSAC+ GAL LG IH ++ ++ +LN IV +L++MY +CG ID AL +F++M++
Sbjct: 239 VSALSACANTGALNLGMSIHGFLLRNISELNIIVKTSLVDMYVKCGCIDNALHIFQKMEK 298
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
R+ TY+++I+G A+HG A+ MF EMI +G+ P V +V +LNACSH GLV G +
Sbjct: 299 RNNLTYSAMISGFALHGEGESALRMFSEMIKEGLEPDHVVYVSLLNACSHSGLVKEGRRV 358
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F M ++ +EP EHYGC+VDLL R G EEA + I ++ I + ++ S LS C++H
Sbjct: 359 FGEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEQNDVVWRSFLSQCRVHQ 418
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
++LG+ A+ LL S + G Y+L+SN Y+ + W + + R ++ G+++ PG S++
Sbjct: 419 NIELGQIAAQELLKLCSHNPGDYLLISNMYSQAHMWDDVARSRTEIAIKGLKQTPGFSTV 478
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
+V + H F+ D HPQ ++IYK + +++ +K EGYSP +L ++++ EK+ L
Sbjct: 479 KVKGKTHRFVSQDRSHPQCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKG 538
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HS+++AI + L+ T P + I++ +NLR+C+DCH+ K I+ I +R+I+VRDRNRFH F+
Sbjct: 539 HSQKVAIAFALLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKG 598
Query: 480 GTCSCGDYW 488
GTCSC DYW
Sbjct: 599 GTCSCKDYW 607
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 183/403 (45%), Gaps = 38/403 (9%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A +F + T + MI G V AL + EM + P+ T C+L AC++
Sbjct: 86 AASIFRGIDDPCTFDFKTMIRGYVNEMSFEVALCFYNEMMERGIEPDNFTYPCLLKACTR 145
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
L A+ G+ IH ++ K ++ + V +LINMY RCG+++ + VFE+++ + +++S+
Sbjct: 146 LKAIREGKQIHGHVFKLGLEADVFVQNSLINMYGRCGEMELSSTVFEKLEFKSAASWSSM 205
Query: 189 IAGLAMHGRSIEAVEMFREMINQ-GIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDY 247
+ G E + +FREM + ++ + V L+AC++ G ++LG I + R+
Sbjct: 206 FSACVGMGMWSECLMLFREMCRETNLKAEESGMVSALSACANTGALNLGMSIHGFLLRNI 265
Query: 248 GIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK----LQL 303
E I +VD+ + G + A M+ +++ +++S +HG+ L++
Sbjct: 266 S-ELNIIVKTSLVDMYVKCGCIDNALHIFQKME-KRNNLTYSAMISGFALHGEGESALRM 323
Query: 304 GEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP-----GCS- 357
++ K L+ D YV L NA + SG KE ++ +M + G + EP GC
Sbjct: 324 FSEMIKEGLE---PDHVVYVSLLNACSHSGLVKEGRRVFGEMLKEG-KVEPTAEHYGCLV 379
Query: 358 -------------------SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYS 398
IE N+ + L R Q ++ + + +++KL ++
Sbjct: 380 DLLGRAGLLEEALETIQSIPIEQNDVVWRSFLSQCRVHQNIELGQIAAQ--ELLKLCSHN 437
Query: 399 PSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRV 441
P +++ ++ W S GL T ++T++V
Sbjct: 438 PGDYLLISNMYSQAHMWDDVARSRTEIAIKGLKQTPGFSTVKV 480
>gi|242045040|ref|XP_002460391.1| hypothetical protein SORBIDRAFT_02g027420 [Sorghum bicolor]
gi|241923768|gb|EER96912.1| hypothetical protein SORBIDRAFT_02g027420 [Sorghum bicolor]
Length = 573
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/470 (43%), Positives = 290/470 (61%), Gaps = 6/470 (1%)
Query: 4 EIHGQVLKLG-LRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
++H K G L S+R R +LV Y CG A ++FD + ND+VA ++ Y +
Sbjct: 99 QLHAHAAKRGFLASHRRVRCRLVHAYAVCGMLPHARRVFDGGTD-NDMVAWNCLLRGYAQ 157
Query: 63 HGLVENAF-EVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPNEVTIV 120
G + + F+R+ +D+V W ++ V NGE A+ +FREM +P+ VT+V
Sbjct: 158 EGGDADLLRDFFARMPSRDSVSWNTVLSLCVVNGEYDEAIAVFREMLASQECQPDRVTLV 217
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
V+SA + LGAL G W H+Y+ + +++ + ALINMYS+CG ++ A+ VF+ ++ +
Sbjct: 218 SVVSAIAYLGALAQGLWAHAYVIRKGVEVEEKLSSALINMYSKCGFLEGAVYVFDNVRGK 277
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
R + T+N+++AG +G S A+ +F M G+ P K+TF +LNACSHGGLV+ G
Sbjct: 278 RSLDTWNAMLAGFTANGCSGRALALFTRMETTGLMPNKITFNCILNACSHGGLVEEGMRC 337
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
FQ M+R YGIEP I HYGC+VDL R G E+A + I M + PD ML +LL AC+ H
Sbjct: 338 FQRMSRVYGIEPDIAHYGCMVDLFCRAGMFEKAEEIIQIMPMEPDASMLKALLGACRTHK 397
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
L+LG++ RL++ D YVLLSN YA G W ++R M + GV K PG SS+
Sbjct: 398 NLELGKKAGHRLIEAAPNDHAGYVLLSNIYALDGNWGRVHKVRKLMLDRGVLKTPGSSSV 457
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE-KEWALA 418
E+N IHEFI GD H ++ IYK + E+ Q +K GY+P T VL DI+D + KE +LA
Sbjct: 458 ELNGVIHEFISGDKSHSRKRDIYKMLDEICQQLKSAGYTPDTSQVLLDIDDEDVKESSLA 517
Query: 419 IHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
+HSE+LAI +GLIST P T IRVV NLR+C DCH+ IKL++ I R +
Sbjct: 518 VHSEKLAIAFGLISTAPGTPIRVVNNLRICGDCHNAIKLLSKIYGRNPLT 567
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 35/198 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G H V++ G+ L+ +Y KC
Sbjct: 231 QGLWAHAYVIRKGVEVEEKLSSALINMYSKC----------------------------- 261
Query: 61 VEHGLVENAFEVFSRVKVKDTV-CWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
G +E A VF V+ K ++ W AM+ G NG RAL LF M+ + PN++T
Sbjct: 262 ---GFLEGAVYVFDNVRGKRSLDTWNAMLAGFTANGCSGRALALFTRMETTGLMPNKITF 318
Query: 120 VCVLSACSQLGALELGRWIHSYMGK-HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
C+L+ACS G +E G M + + I+ + G +++++ R G +KA ++ + M
Sbjct: 319 NCILNACSHGGLVEEGMRCFQRMSRVYGIEPDIAHYGCMVDLFCRAGMFEKAEEIIQIMP 378
Query: 179 -ERDVTTYNSLIAGLAMH 195
E D + +L+ H
Sbjct: 379 MEPDASMLKALLGACRTH 396
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 100 ALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH-IVGGALI 158
AL LF + R P+ L++C++ +H++ K +H V L+
Sbjct: 62 ALRLFDHLLRSGADPDPAAYELALASCARGKDRATAAQLHAHAAKRGFLASHRRVRCRLV 121
Query: 159 NMYSRCGDIDKALQVFE--------------------------------EMKERDVTTYN 186
+ Y+ CG + A +VF+ M RD ++N
Sbjct: 122 HAYAVCGMLPHARRVFDGGTDNDMVAWNCLLRGYAQEGGDADLLRDFFARMPSRDSVSWN 181
Query: 187 SLIAGLAMHGRSIEAVEMFREMI-NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR 245
++++ ++G EA+ +FREM+ +Q +P +VT V V++A ++ G + G + R
Sbjct: 182 TVLSLCVVNGEYDEAIAVFREMLASQECQPDRVTLVSVVSAIAYLGALAQGLWAHAYVIR 241
Query: 246 DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
G+E + + ++++ S+ G E A N++
Sbjct: 242 K-GVEVEEKLSSALINMYSKCGFLEGAVYVFDNVR 275
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/473 (41%), Positives = 294/473 (62%), Gaps = 6/473 (1%)
Query: 17 NRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRV 76
N + L++++ K G + A +FDE+ + V +MI+ Y G + A E+F +
Sbjct: 292 NSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNM 351
Query: 77 KVKDTVCWTAMIDGLVRNGEMARALDLFREMQR-DNVRPNEVTIVCVLSACSQLGALELG 135
+D V W +MI G +NGE A +++LF+EM +++P+EVTI VLSAC +GAL+L
Sbjct: 352 PKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLS 411
Query: 136 RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMH 195
W+ + + I L +LI MYS+CG + A ++F+ M RDV ++N+LI+G A +
Sbjct: 412 YWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAAN 471
Query: 196 GRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEH 255
G EA+++ M +GI P VT++GVL ACSH GL++ G +F+S+ P ++H
Sbjct: 472 GHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQ-----APTVDH 526
Query: 256 YGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR 315
Y C+VDLL R G +EA I +M + P + GSLL+A +IH ++ LGE A +L +
Sbjct: 527 YACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELE 586
Query: 316 SADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRH 375
+ G YVLLSN YAS G+W++ ++R MK+ G++K G S +E ++H+F +GD H
Sbjct: 587 PQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSH 646
Query: 376 PQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKP 435
Q + IYK + EL++ +K G+ L D+E+ EKE L HSE+LAIC+ L+ ++
Sbjct: 647 EQSKDIYKLLAELERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEV 706
Query: 436 YTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
TTIRVVKNLR+C DCH+ IK+I+ + R+I+VRD NRFH F G CSC DYW
Sbjct: 707 GTTIRVVKNLRICLDCHTAIKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 167/408 (40%), Gaps = 98/408 (24%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPE-------------- 46
G H VLKLG + R ++++Y K G+ A LF++M E
Sbjct: 113 SGNLFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCW 172
Query: 47 ----------------CNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDG 90
+++ T M+ Y + G +E+A F + + V W AM
Sbjct: 173 KSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSA 232
Query: 91 LVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLN 150
+ AL+LF +M + + P++ T V +S+CS +G L I + + I LN
Sbjct: 233 YAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLN 292
Query: 151 HIVGGALINM--------------------------------YSRCGDIDKALQVFEEMK 178
V AL++M Y+R G + A ++F+ M
Sbjct: 293 SFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMP 352
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN-QGIRPTKVTFVGVLNACSHGGLVDLGF 237
+RDV ++NS+IAG A +G S ++E+F+EMI+ I+P +VT VL+AC H G + L +
Sbjct: 353 KRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSY 412
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM------------------ 279
+ + R+ I+ I + ++ + S+ G +A+ M
Sbjct: 413 WVLD-IVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAAN 471
Query: 280 ----------------KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
I PDH+ +L+AC G L G+ + K +
Sbjct: 472 GHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSI 519
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 114/264 (43%), Gaps = 18/264 (6%)
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
S ++INC H +F+ D ++ M+ R G + + LF+ N+
Sbjct: 37 SLLLINCTRLHAHPAYVDSIFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNL 96
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
RP + ++ + G L H+Y+ K +H + A+++MY++ G +D A
Sbjct: 97 RPQPFVYIYLIKLAGKSGNL-----FHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARN 151
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
+FE+M ER + +NS+I+G G EAV +F M + I +T+ ++ + G
Sbjct: 152 LFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPARNI----ITWTSMVTGYAKMGD 207
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLG 289
++ F M E + + + ++ P+EA + M I PD
Sbjct: 208 LESARRYFDEMP-----ERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWV 262
Query: 290 SLLSACKIHGKLQLGEQIAKRLLD 313
+S+C G L + I R++D
Sbjct: 263 VTISSCSSIGDPTLADSIL-RMID 285
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/489 (40%), Positives = 290/489 (59%), Gaps = 33/489 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
GR +HG VL G + + LV LYGKCG+
Sbjct: 129 HGRVVHGHVLVHGFGLDVYVQAALVALYGKCGD--------------------------- 161
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ NA +VF +++ + V W +MI G +NG A+ LF M+ V P+ T V
Sbjct: 162 -----LINARKVFDKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFV 216
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSAC+ LGA LG W+H Y+ + +DLN ++G +LINMY RCG++ KA +VF+ MKER
Sbjct: 217 SVLSACAHLGAFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKER 276
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+V + ++I+G +G +AVE+F EM G+ P +TFV VL+AC+H GLV+ G +F
Sbjct: 277 NVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEGRRLF 336
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFIT-NMKIAPDHIMLGSLLSACKIHG 299
S+ +Y + P +EH C+VD+L R G +EAY+FI + P +L ++L ACK+H
Sbjct: 337 ASIREEYHLVPGVEHNVCLVDMLGRAGLLDEAYNFIKEEIPENPAPAILTAMLGACKMHK 396
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
LG Q+A+ LL + YV+LSN YA +G+ + +R M ++K+ G S++
Sbjct: 397 NFDLGAQVAEHLLAAEPENPAHYVILSNIYALAGRMDQVEIVRNNMIRKCLKKQVGYSTV 456
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
EV+ + + F +GD H + IY + EL GY P ++ V+H++E+ E+E+AL
Sbjct: 457 EVDQKTYLFSMGDKSHSETNAIYHYLDELMWKCSEAGYVPVSDSVMHELEEEEREYALRY 516
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +GL+ T T IR+VKNLR+C DCHS IK I+ I+ R+IIVRD+ RFHHF+
Sbjct: 517 HSEKLAIAFGLLKTSHGTPIRIVKNLRMCEDCHSAIKFISAISSREIIVRDKLRFHHFKV 576
Query: 480 GTCSCGDYW 488
G+CSC DYW
Sbjct: 577 GSCSCLDYW 585
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 152/299 (50%), Gaps = 10/299 (3%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMA-RALDLFREMQRDNV 112
T ++N G + ++F V D+ +T++I ++ + +L + M NV
Sbjct: 48 TKLLNLACAAGSISYTRQIFLAVPNPDSFLFTSLIKSTSKSHNFSIYSLYFYSRMVLSNV 107
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
P+ T V+ +C+ L AL+ GR +H ++ H L+ V AL+ +Y +CGD+ A +
Sbjct: 108 SPSNYTFTSVIKSCADLSALKHGRVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINARK 167
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
VF++++ER + +NS+I+G +G + EA+ +F M G+ P TFV VL+AC+H G
Sbjct: 168 VFDKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGA 227
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
LG + + + + G++ + ++++ R G +A + +MK + + +++
Sbjct: 228 FSLGCWVHEYIVGN-GLDLNVVLGTSLINMYIRCGNVSKAREVFDSMK-ERNVVAWTAMI 285
Query: 293 SACKIHGKLQLGEQIAKRLLDCRS----ADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
S +G G Q + + R +S T+V + +A A +G E ++ A ++E
Sbjct: 286 SG---YGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEGRRLFASIRE 341
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/511 (38%), Positives = 295/511 (57%), Gaps = 33/511 (6%)
Query: 9 VLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINC--------- 59
V K GL + LV++Y K G+ K A ++FD+MP+ DVVA MI
Sbjct: 141 VEKGGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPK-RDVVAWNAMIAGLSQSEDPYV 199
Query: 60 ----------------------YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEM 97
Y +G E+F ++K+ + V W +I ++NG
Sbjct: 200 ARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGN-VTWNVIIAAYMQNGHA 258
Query: 98 ARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGAL 157
A+ F +M+ +N PN VT V VL A + L A G H+ + + N +VG +L
Sbjct: 259 KEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSL 318
Query: 158 INMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTK 217
I+MY++CG +D + ++F EM +D ++N++++G A+HG A+ +F M ++
Sbjct: 319 IDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDS 378
Query: 218 VTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFIT 277
V+FV VL+AC H GLV+ G +IF SM+ Y I+P +EHY C+VDLL R G +E FI
Sbjct: 379 VSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIK 438
Query: 278 NMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKE 337
M + PD + G+LL +C++H ++LGE L+ + +V+LS+ YA SG+W +
Sbjct: 439 VMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWAD 498
Query: 338 AVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGY 397
A + R+KM + G++K PGCS +E+ N++H F +GD HPQ E ++ L + ++ GY
Sbjct: 499 AGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGY 558
Query: 398 SPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKL 457
P VL ++E+ +KE L HSERLAI + L++T P +TI++VKNLRVC DCH+ K
Sbjct: 559 VPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKF 618
Query: 458 IANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
I+ IT R+IIVRD RFHHFE+G CSC DYW
Sbjct: 619 ISKITTRRIIVRDATRFHHFEDGICSCNDYW 649
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 90/200 (45%), Gaps = 38/200 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG H ++++G SN L+++Y KCG+ + +LF+EM + D V+ M++ Y
Sbjct: 295 EGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEM-DHKDTVSWNAMLSGY 353
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG +G+ RA+ LF MQ V+ + V+ V
Sbjct: 354 AVHG-----------------------------HGD--RAIALFSLMQESQVQIDSVSFV 382
Query: 121 CVLSACSQLGALELGRWI-HSYMGKHRI--DLNHIVGGALINMYSRCGDIDKALQVFEEM 177
VLSAC G +E GR I HS K+ I DL H ++++ R G D+ L + M
Sbjct: 383 SVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHY--ACMVDLLGRAGLFDETLGFIKVM 440
Query: 178 K-ERDVTTYNSLIAGLAMHG 196
E D + +L+ MH
Sbjct: 441 PVEPDAGVWGALLGSCRMHS 460
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 83/190 (43%), Gaps = 38/190 (20%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
T +IN Y + A VF + W +MI R+ + AL+++
Sbjct: 87 THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMY--------- 137
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
C++ + G LE +I G L++MYS+ GD+ +A +V
Sbjct: 138 ------YCMV----EKGGLERDVFI---------------GAGLVDMYSKMGDLKRAREV 172
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV 233
F++M +RDV +N++IAGL+ A +F +M++Q V++ ++ +H G
Sbjct: 173 FDKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQD----DVSWGTMMAGYAHNGCF 228
Query: 234 DLGFEIFQSM 243
E+F M
Sbjct: 229 VEVLELFDKM 238
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
[Vitis vinifera]
Length = 1005
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/488 (38%), Positives = 283/488 (57%), Gaps = 31/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G IHG ++KLG S+ + L+++Y KCG A LF++
Sbjct: 549 QGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTD--------------- 593
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
KD V W +I ++NG A+ F +M+ +N PN VT V
Sbjct: 594 ----------------FTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFV 637
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL A + L A G H+ + + N +VG +LI+MY++CG +D + ++F EM +
Sbjct: 638 SVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHK 697
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++N++++G A+HG A+ +F M ++ V+FV VL+AC H GLV+ G +IF
Sbjct: 698 DTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIF 757
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM+ Y I+P +EHY C+VDLL R G +E FI M + PD + G+LL +C++H
Sbjct: 758 HSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSN 817
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++LGE L+ + +V+LS+ YA SG+W +A + R+KM + G++K PGCS +E
Sbjct: 818 VKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVE 877
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+ N++H F +GD HPQ E ++ L + ++ GY P VL ++E+ +KE L H
Sbjct: 878 LKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSH 937
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLAI + L++T P +TI++VKNLRVC DCH+ K I+ IT R+IIVRD RFHHFE+G
Sbjct: 938 SERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDG 997
Query: 481 TCSCGDYW 488
CSC DYW
Sbjct: 998 ICSCNDYW 1005
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 160/350 (45%), Gaps = 34/350 (9%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+EIHG L+ + S+ L+ +Y KCGE
Sbjct: 347 KGKEIHGCALQQRIDSDILVATPLMVMYAKCGE--------------------------- 379
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
E A ++F ++ +D V W+A+I LV+ G AL LF+EMQ ++PN VT++
Sbjct: 380 -----TEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLM 434
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L AC+ L L+LG+ IH + K +D + G AL++MY++CG AL F M R
Sbjct: 435 SILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSR 494
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D+ T+NSLI G A G A++MF ++ I P T VGV+ AC+ +D G I
Sbjct: 495 DIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCI- 553
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ G E ++D+ ++ G A D + +++A +G
Sbjct: 554 HGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGH 613
Query: 301 LQLG-EQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
+ + L+ +S T+V + A A ++E + A + + G
Sbjct: 614 AKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMG 663
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 177/384 (46%), Gaps = 74/384 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG HG++ + GL + LV++Y K G+ K A ++FD+MP+
Sbjct: 147 EGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPK-------------- 192
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+D V W AMI GL ++ + A+D FR MQ V P+ V+++
Sbjct: 193 ------------------RDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLL 234
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+ +L +EL R IH Y+ R D + V LI++YS+CGD+D A +VF++M ++
Sbjct: 235 NLFPGICKLSNIELCRSIHGYV--FRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQ 292
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++ +++AG A +G +E +E+F +M +R KV+ V A + ++ G EI
Sbjct: 293 DDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIH 352
Query: 241 -----QSMTRD------------------------YGIEPQ-IEHYGCIVDLLSRVGRPE 270
Q + D +G++ + + + I+ L + G PE
Sbjct: 353 GCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPE 412
Query: 271 EA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQI----AKRLLDCRSADSGTYV 323
EA + + N K+ P+ + L S+L AC L+LG+ I K +D +D T
Sbjct: 413 EALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMD---SDLSTGT 469
Query: 324 LLSNAYASSGKWKEAVQIRAKMKE 347
L + YA G + A+ +M
Sbjct: 470 ALVSMYAKCGFFTAALTTFNRMSS 493
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 151/327 (46%), Gaps = 47/327 (14%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
R IHG V + S S L++LY KCG+
Sbjct: 250 RSIHGYVFRRDFSSAVSN--GLIDLYSKCGD----------------------------- 278
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
V+ A VF ++ +D V W M+ G NG L+LF +M+ NVR N+V+ V
Sbjct: 279 ---VDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSA 335
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
A ++ LE G+ IH + RID + +V L+ MY++CG+ +KA Q+F ++ RD+
Sbjct: 336 FLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDL 395
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
++++IA L G EA+ +F+EM NQ ++P +VT + +L AC+ L+ LG I
Sbjct: 396 VAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSI-HC 454
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
T ++ + +V + ++ G A M + D + SL I+G Q
Sbjct: 455 FTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMS-SRDIVTWNSL-----INGYAQ 508
Query: 303 LG------EQIAKRLLDCRSADSGTYV 323
+G + K L + D+GT V
Sbjct: 509 IGDPYNAIDMFYKLRLSAINPDAGTMV 535
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 91/171 (53%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
T +IN Y + A VF + W +MI R+ + AL+++ M +
Sbjct: 67 THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLE 126
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
P++ T VL AC+ L+ G W H + + ++ + +G L++MYS+ GD+ +A +V
Sbjct: 127 PDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREV 186
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL 224
F++M +RDV +N++IAGL+ EAV+ FR M G+ P+ V+ + +
Sbjct: 187 FDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLF 237
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 12/175 (6%)
Query: 122 VLSACSQLGAL-ELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+LS+C L L ++ I KH + H LIN+YS D A VF+
Sbjct: 38 LLSSCKHLNPLLQIHAQIIVSGFKHHHSITH-----LINLYSLFHKCDLARSVFDSTPNP 92
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI- 239
+NS+I + EA+EM+ M+ +G+ P K TF VL AC+ G ++L +
Sbjct: 93 SRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACT--GALNLQEGVW 150
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVG---RPEEAYDFITNMKIAPDHIMLGSL 291
F G+E + +VD+ S++G R E +D + + + M+ L
Sbjct: 151 FHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGL 205
>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
Length = 684
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/440 (42%), Positives = 283/440 (64%), Gaps = 1/440 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DVV +T +++ Y ++G + A +VF + ++ V W A+I G +NG ALDLFREM
Sbjct: 246 DVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMS 305
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
++P+ +V L AC+ +G L+LG+ IH ++ + R++ I+G A+++MYS+CG ++
Sbjct: 306 TSGLQPDSGALVSALLACADVGFLKLGKSIHGFILR-RLEFQCILGTAVLDMYSKCGSLE 364
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A ++F ++ RD+ +N++IA HG +A+ +F+E+ GI+P TF +L+A S
Sbjct: 365 SARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALS 424
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLV+ G F M ++GIEP +H C+VDLL+R G EEA + + +M P +
Sbjct: 425 HSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIW 484
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+LLS C + KL+LGE IAK++L+ + D G L+SN YA++ KW + +IR MK++
Sbjct: 485 VALLSGCLNNKKLELGETIAKKILESQPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDS 544
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
G +K PG S IEV+ H F++ D HPQ ++I K + +L ++ GY P TE V HD+
Sbjct: 545 GSKKVPGYSLIEVHGTRHAFVMEDQSHPQHQEILKMISKLSFEMRKMGYVPRTEFVYHDL 604
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
++ KE L+ HSERLAI +GL++T P T + ++KNLRVC DCH IK I+ I R+I+V
Sbjct: 605 DEDVKEQLLSYHSERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVV 664
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD RFHHF++G CSCGDYW
Sbjct: 665 RDAKRFHHFKDGACSCGDYW 684
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 149/293 (50%), Gaps = 10/293 (3%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV + +++ Y G + +A VF + KD V W+ M+ G V G AL ++ M+
Sbjct: 145 DVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMR 204
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
V +EV +V V+ AC+ G +G +H +H + ++ ++ +L++MY++ G D
Sbjct: 205 EHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFD 264
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A QVF M R+ ++N+LI+G A +G + EA+++FREM G++P V L AC+
Sbjct: 265 VARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACA 324
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
G + LG I + R +E Q ++D+ S+ G E A + + D ++
Sbjct: 325 DVGFLKLGKSIHGFILRR--LEFQCILGTAVLDMYSKCGSLESARKLFNKLS-SRDLVLW 381
Query: 289 GSLLSACKIHG----KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKE 337
++++ C HG L L +++ + + D T+ L +A + SG +E
Sbjct: 382 NAMIACCGTHGCGHDALALFQELNETGI---KPDHATFASLLSALSHSGLVEE 431
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 113/258 (43%), Gaps = 36/258 (13%)
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W A++ R G AL +FR + + RP+ T L+AC++LG L+ +
Sbjct: 80 WNALLAARSRAGSPGAALRVFRALP-SSARPDSTTFTLALTACARLGDLDAAEAVRVRAF 138
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
+ V AL+++YSRCG + A++VF+ M +D +++++AG GR +EA+
Sbjct: 139 AAGYGRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALG 198
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDL- 262
M+ M G+ +V VGV+ AC+ G +G + R +G+ + +VD+
Sbjct: 199 MYSRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLR-HGMRMDVVIATSLVDMY 257
Query: 263 ------------------------------LSRVGRPEEAYDFITNMK---IAPDHIMLG 289
++ G +EA D M + PD L
Sbjct: 258 AKNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALV 317
Query: 290 SLLSACKIHGKLQLGEQI 307
S L AC G L+LG+ I
Sbjct: 318 SALLACADVGFLKLGKSI 335
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/473 (41%), Positives = 294/473 (62%), Gaps = 6/473 (1%)
Query: 17 NRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRV 76
N + L++++ K G + A +FDE+ + V +MI+ Y G + A E+F +
Sbjct: 292 NSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNM 351
Query: 77 KVKDTVCWTAMIDGLVRNGEMARALDLFREMQR-DNVRPNEVTIVCVLSACSQLGALELG 135
+D V W +MI G +NGE A +++LF+EM +++P+EVTI VLSAC +GAL+L
Sbjct: 352 PKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLS 411
Query: 136 RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMH 195
W+ + + I L +LI MYS+CG + A ++F+ M RDV ++N+LI+G A +
Sbjct: 412 YWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAAN 471
Query: 196 GRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEH 255
G EA+++ M +GI P VT++GVL ACSH GL++ G +F+S+ P ++H
Sbjct: 472 GHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQ-----APTVDH 526
Query: 256 YGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR 315
Y C+VDLL R G +EA I +M + P + GSLL+A +IH ++ LGE A +L +
Sbjct: 527 YACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELE 586
Query: 316 SADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRH 375
+ G YVLLSN YAS G+W++ ++R MK+ G++K G S +E ++H+F +GD H
Sbjct: 587 PQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSH 646
Query: 376 PQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKP 435
Q + IYK + EL++ +K G+ L D+E+ EKE L HSE+LAIC+ L+ ++
Sbjct: 647 EQSKDIYKLLAELERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEV 706
Query: 436 YTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
TTIRVVKNLR+C DCH+ IK+I+ + R+I+VRD NRFH F G CSC DYW
Sbjct: 707 GTTIRVVKNLRICLDCHTAIKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 167/408 (40%), Gaps = 98/408 (24%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPE-------------- 46
G H VLKLG + R ++++Y K G+ A LF++M E
Sbjct: 113 SGNMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCW 172
Query: 47 ----------------CNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDG 90
+++ T M+ Y + G +E+A F + + V W AM
Sbjct: 173 KSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSA 232
Query: 91 LVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLN 150
+ AL+LF +M + + P++ T V +S+CS +G L I + + I LN
Sbjct: 233 YAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLN 292
Query: 151 HIVGGALINM--------------------------------YSRCGDIDKALQVFEEMK 178
V AL++M Y+R G + A ++F+ M
Sbjct: 293 SFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMP 352
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN-QGIRPTKVTFVGVLNACSHGGLVDLGF 237
+RDV ++NS+IAG A +G S ++E+F+EMI+ I+P +VT VL+AC H G + L +
Sbjct: 353 KRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSY 412
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM------------------ 279
+ + R+ I+ I + ++ + S+ G +A+ M
Sbjct: 413 WVLD-IVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAAN 471
Query: 280 ----------------KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
I PDH+ +L+AC G L G+ + K +
Sbjct: 472 GHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSI 519
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 114/264 (43%), Gaps = 18/264 (6%)
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
S ++INC H +F+ D ++ M+ R G + + LF+ N+
Sbjct: 37 SLLLINCTRLHAHPAYVDSIFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNL 96
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
RP + ++ + G + H+Y+ K +H + A+++MY++ G +D A
Sbjct: 97 RPQPFVYIYLIKLAGKSGNM-----FHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARN 151
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
+FE+M ER + +NS+I+G G EAV +F M + I +T+ ++ + G
Sbjct: 152 LFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPARNI----ITWTSMVTGYAKMGD 207
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLG 289
++ F M E + + + ++ P+EA + M I PD
Sbjct: 208 LESARRYFDEMP-----ERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWV 262
Query: 290 SLLSACKIHGKLQLGEQIAKRLLD 313
+S+C G L + I R++D
Sbjct: 263 VTISSCSSIGDPTLADSIL-RMID 285
>gi|413934702|gb|AFW69253.1| hypothetical protein ZEAMMB73_589560 [Zea mays]
Length = 664
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/478 (39%), Positives = 292/478 (61%), Gaps = 3/478 (0%)
Query: 13 GLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEV 72
G +R L+ Y CG+ A ++FDEM DV++ T ++ Y + +A EV
Sbjct: 188 GFDKHRFVENSLISAYVACGDVGAARKVFDEM-LVKDVISWTSIVVAYSRIRDMGSAEEV 246
Query: 73 FSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGAL 132
F+ VKD V WTAM+ G +N +AL+ F +M + +EV++ +SAC+QLGA+
Sbjct: 247 FALCPVKDMVAWTAMVTGYAQNAMPVKALEAFEQMAVAGMPIDEVSLTGAISACAQLGAV 306
Query: 133 ELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGL 192
+ W+ ++ + N +VG L++MY++CG ID+A +VFE M +++V TY+S+I GL
Sbjct: 307 KRAAWVQEIAERNGLGRNVVVGSGLVDMYAKCGLIDEARKVFEGMHDKNVYTYSSMIVGL 366
Query: 193 AMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEP 251
A HGR+ + + +F +M+ + + P VTF+GVL ACSH G+V G F M YGI P
Sbjct: 367 ASHGRANDVIALFNDMVRRADVEPNHVTFIGVLTACSHAGMVKEGRYYFAQMKDRYGILP 426
Query: 252 QIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
+HY C+VDLL+R G EA D + +M + P + G+LL AC+IHG ++ + A+ L
Sbjct: 427 SADHYACMVDLLARSGLVTEALDLVKSMTVEPHGGVWGALLGACRIHGNTEVAKIAAEHL 486
Query: 312 LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNE-IHEFIL 370
G YVLLSN AS+G+W E ++R M+ G++K+P S E + +H+F
Sbjct: 487 FRLEPEGIGNYVLLSNTLASAGEWDEVSKLRKLMRIRGLKKDPAVSWFEGRDGFVHQFFA 546
Query: 371 GDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGL 430
GD HP +I K++ EL++ + L GY P V++++ + EKE L HSE+LA+ +GL
Sbjct: 547 GDNTHPSMHEIKKRLLELREKLNLAGYVPILSSVVYNVSEEEKERLLMGHSEKLALSFGL 606
Query: 431 ISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
++ + ++IR+VKNLR+C DCH I+L++ + +I+VRD RFHHF +G CSCG +W
Sbjct: 607 LTLESRSSIRIVKNLRICEDCHLFIRLVSKVEPIEILVRDNMRFHHFRDGECSCGGFW 664
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/434 (42%), Positives = 284/434 (65%), Gaps = 3/434 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DVV ++N Y + G + A VF ++ KDT+ W ++ G +NG + A+D + M+
Sbjct: 358 DVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMME 417
Query: 109 --RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
RD + PN+ T V ++ A S +GAL+ G IH+ + K+ + L+ V LI++Y +CG
Sbjct: 418 ECRDTI-PNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGR 476
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
++ A+ +F E+ +N++IA L +HGR EA+++F++M+ + ++ +TFV +L+A
Sbjct: 477 LEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSA 536
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
CSH GLVD G + F M ++YGI+P ++HYGC+VDLL R G E+AY+ + NM I PD
Sbjct: 537 CSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDAS 596
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
+ G+LLSACKI+G +LG + RLL+ S + G YVLLSN YA++ KW+ +++R+ +
Sbjct: 597 IWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLAR 656
Query: 347 EAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH 406
+ G++K PG SS+ V ++ F G+ HP+ +IYK+++ L +K GY P V
Sbjct: 657 DRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQ 716
Query: 407 DIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKI 466
DIE+ EKE L HSERLAI +G+IST P + IR+ KNLRVC DCH+ K I+ I++R+I
Sbjct: 717 DIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISRISEREI 776
Query: 467 IVRDRNRFHHFENG 480
+VRD NRFHHF++G
Sbjct: 777 VVRDSNRFHHFKDG 790
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 175/362 (48%), Gaps = 41/362 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G IH VLK GL S+ L+ +Y K G +DA +FD+M
Sbjct: 241 GVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQM----------------- 283
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+V+D V W ++I +N + + AL F+ MQ +RP+ +T+V
Sbjct: 284 ---------------EVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVS 328
Query: 122 VLSACSQLGALELGRWIHSYMGKHR-IDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+ S SQL + R I ++ + +D + ++G AL+NMY++ G ++ A VF+++ +
Sbjct: 329 LTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRK 388
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMIN-QGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
D ++N+L+ G +G + EA++ + M + P + T+V ++ A SH G + G +I
Sbjct: 389 DTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKI 448
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+ ++ + + C++DL + GR E+A + + +++++ IHG
Sbjct: 449 HAKLIKN-SLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIP-RDTSVPWNAIIASLGIHG 506
Query: 300 KLQLGEQIAKRLLDCR-SADSGTYVLLSNAYASSGKWKEAVQIRAKM-KEAGVQ---KEP 354
+ + Q+ K +L R AD T+V L +A + SG E + M KE G++ K
Sbjct: 507 RGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHY 566
Query: 355 GC 356
GC
Sbjct: 567 GC 568
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 150/300 (50%), Gaps = 3/300 (1%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+DV + +++ Y +G+++ A +VF + VKD W AMI G +NG A AL + M
Sbjct: 154 DDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRM 213
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ + V+ + +T+ +L C+Q + G IH ++ KH +D + V ALINMYS+ G +
Sbjct: 214 KGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRL 273
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A VF++M+ RD+ ++NS+IA + A+ F+ M GIRP +T V + +
Sbjct: 274 QDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIF 333
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
S + I + R ++ + +V++ +++G A+ + D I
Sbjct: 334 SQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLP-RKDTIS 392
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSA--DSGTYVLLSNAYASSGKWKEAVQIRAKM 345
+L++ +G + +CR + GT+V + AY+ G ++ ++I AK+
Sbjct: 393 WNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKL 452
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 128/253 (50%), Gaps = 9/253 (3%)
Query: 46 ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALD--- 102
+ ++V ST +IN YV HG + + F + K+ W ++I VR G+ A++
Sbjct: 50 KSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVN 109
Query: 103 -LFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMY 161
LF ++RP+ T +L AC L G+ +H + K + + V +L+++Y
Sbjct: 110 QLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLY 166
Query: 162 SRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFV 221
SR G +D A +VF +M +DV ++N++I+G +G + A+ + M +G++ +T
Sbjct: 167 SRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVA 226
Query: 222 GVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKI 281
+L C+ V G I + + +G++ + ++++ S+ GR ++A M++
Sbjct: 227 SILPVCAQSDDVINGVLIHLHVLK-HGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEV 285
Query: 282 APDHIMLGSLLSA 294
D + S+++A
Sbjct: 286 R-DLVSWNSIIAA 297
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 40/203 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G +IH +++K L + L++LYGKCG +DAM LF E+P
Sbjct: 444 QGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIP--------------- 488
Query: 61 VEHGLVENAFEVFSRVKVKDT-VCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
+DT V W A+I L +G AL LF++M + V+ + +T
Sbjct: 489 ------------------RDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITF 530
Query: 120 VCVLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
V +LSACS G ++ G+ M K + L H G ++++ R G ++KA ++
Sbjct: 531 VSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHY--GCMVDLLGRAGYLEKAYELVRN 588
Query: 177 MK-ERDVTTYNSLIAGLAMHGRS 198
M + D + + +L++ ++G +
Sbjct: 589 MPIQPDASIWGALLSACKIYGNA 611
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/459 (39%), Positives = 289/459 (62%), Gaps = 2/459 (0%)
Query: 30 KCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMID 89
KCG + L + + V A+ +++ Y +VE+A ++F ++ +D WT MI
Sbjct: 168 KCGRLIHCITLKCGLDYGHFVCAT--LVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIG 225
Query: 90 GLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDL 149
L +G +L F M+ + P++V +V V+ AC++LGA+ + IH+Y+ L
Sbjct: 226 ALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSL 285
Query: 150 NHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
+ I+G A+I+MY++CG ++ A +F+ M+ R+V T++++IA HG+ +A+E+F M+
Sbjct: 286 DVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMML 345
Query: 210 NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRP 269
GI P ++TFV +L ACSH GL++ G F SM +YG+ P ++HY C+VDLL R GR
Sbjct: 346 RSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRL 405
Query: 270 EEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAY 329
+EA + I M + D ++ G+LL AC+IH L L E++A+ LL +S G YVLLSN Y
Sbjct: 406 DEALEMIEGMPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIY 465
Query: 330 ASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELK 389
A++GKW++ + R M + G++K PG + IEV ++++F +GD HP+ +IYK ++ L
Sbjct: 466 ANAGKWEDMAKTRDLMTKGGLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLG 525
Query: 390 QIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCN 449
+ +++ GY P T VL+D+++ K+ L HSE+LAI +GL+ IR+ KNLRVC
Sbjct: 526 EKLEVAGYHPDTNDVLYDVDEEVKQGLLYSHSEKLAIAFGLLVLPQGHPIRITKNLRVCG 585
Query: 450 DCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
DCH+ K ++ I ++ IIVRD RFHHF+ G CSC DYW
Sbjct: 586 DCHTFCKFVSLIEQKTIIVRDAKRFHHFKEGVCSCRDYW 624
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/433 (23%), Positives = 181/433 (41%), Gaps = 51/433 (11%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
++ + ++ YVE G +E+A E+F + + W+ ++ G + G +FRE+
Sbjct: 84 NLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFRELL 143
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
R ++ + V+ AC L L+ GR IH K +D H V L++MY+RC ++
Sbjct: 144 RSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVE 203
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A Q+F +M +RD+ T+ +I LA G +E++ F M NQGI P KV V V+ AC+
Sbjct: 204 DAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACA 263
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK-------- 280
G ++ I + G + ++D+ ++ G E A M+
Sbjct: 264 KLGAMNKAKAI-HAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWS 322
Query: 281 --------------------------IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD- 313
I P+ I SLL AC G ++ G++ + D
Sbjct: 323 AMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDE 382
Query: 314 -CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGD 372
+ D Y + + +G+ EA+++ M +E + + +LG
Sbjct: 383 YGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGM------------PVEKDEVLWGALLGA 430
Query: 373 IRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLIS 432
R + + +++ + ++KL+ P V+L +I +W + L GL
Sbjct: 431 CRIHRHLDLAERVA--RSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLRK 488
Query: 433 TKPYTTIRVVKNL 445
T I V + L
Sbjct: 489 IPGRTWIEVGEKL 501
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 38/199 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+ + IH + G + ++++Y KCG + A +FD M + +V+ + MI Y
Sbjct: 270 KAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRM-QVRNVITWSAMIAAY 328
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG GE +AL+LF M R + PN +T V
Sbjct: 329 GYHG-----------------------------QGE--KALELFPMMLRSGILPNRITFV 357
Query: 121 CVLSACSQLGALELG-RWIHSYMGKHRI--DLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+L ACS G +E G R+ S ++ + D+ H ++++ R G +D+AL++ E M
Sbjct: 358 SLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYT--CMVDLLGRAGRLDEALEMIEGM 415
Query: 178 K-ERDVTTYNSLIAGLAMH 195
E+D + +L+ +H
Sbjct: 416 PVEKDEVLWGALLGACRIH 434
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 73/161 (45%), Gaps = 8/161 (4%)
Query: 136 RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMH 195
R +H+ + + N V L+ MY G ++ A ++F+ M +R +++ ++ G A
Sbjct: 70 RQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKV 129
Query: 196 GRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEH 255
G MFRE++ G + V+ AC + G + +T G++ H
Sbjct: 130 GNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCG-RLIHCITLKCGLD--YGH 186
Query: 256 YGC--IVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSL 291
+ C +VD+ +R E+A+ M +A +M+G+L
Sbjct: 187 FVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGAL 227
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/441 (39%), Positives = 276/441 (62%), Gaps = 1/441 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+DV + +++ Y G ++ A VF +++ K+ V W A+I G R G+ L +F EM
Sbjct: 198 DDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEM 257
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
QR+ T V SA + +GALE G+W+H++M K L+ VG +++MY++ G +
Sbjct: 258 QRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSM 317
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A +VF+ + ++DV T+NS++ A +G EAV F EM G+ ++TF+ +L AC
Sbjct: 318 IDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTAC 377
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SHGGLV G + F M ++Y +EP+I+HY +VDLL R G +A FI M + P +
Sbjct: 378 SHGGLVKEGKQYFD-MMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAV 436
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
G+LL +C++H ++G+ A + + D+G VLL N YAS+G+W A ++R MK
Sbjct: 437 WGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKA 496
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
GV+KEP CS +E+ N +H F+ D HP+ E+IYKK +E+ ++ GY P+T+ VL
Sbjct: 497 TGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLH 556
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
+++ E++ L HSE++A+ + LI+ TIR++KN+R+C DCHS + I+ + KR+I+
Sbjct: 557 VDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIV 616
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
VRD NRFHHF +G+CSCGDYW
Sbjct: 617 VRDTNRFHHFSSGSCSCGDYW 637
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 139/302 (46%), Gaps = 9/302 (2%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+I+ Y + G V +A VF + +D WT++I G +N AL L M R +PN
Sbjct: 105 LIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPN 164
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
T +L A + +G IH+ K+ + VG AL++MY+RCG +D A+ VF+
Sbjct: 165 GFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFD 224
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
+++ ++ ++N+LIAG A G + MF EM G T T+ V +A + G ++
Sbjct: 225 QLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQ 284
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G + M + G I+D+ ++ G +A + D + S+L+A
Sbjct: 285 GKWVHAHMIKS-GERLSAFVGNTILDMYAKSGSMIDARKVFDRVD-KKDVVTWNSMLTAF 342
Query: 296 KIHGKLQLGEQIAKRLLDCRSA----DSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
+G LG + + R + T++ + A + G KE Q MKE ++
Sbjct: 343 AQYG---LGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLE 399
Query: 352 KE 353
E
Sbjct: 400 PE 401
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 79/151 (52%), Gaps = 1/151 (0%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+++AC++ +L+ R IH+++ + + + +LI++Y +CG + A +VF+ M RD
Sbjct: 70 LITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARD 129
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++ SLIAG A + EA+ + M+ +P TF +L A +G +I
Sbjct: 130 MCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQI-H 188
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
++T Y + ++D+ +R GR + A
Sbjct: 189 ALTVKYDWHDDVYVGSALLDMYARCGRMDMA 219
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 89/198 (44%), Gaps = 37/198 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ +H ++K G R + ++++Y K G DA ++FD + + DVV M+ +
Sbjct: 284 QGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDK-KDVVTWNSMLTAF 342
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++GL A+ F EM++ V N++T +
Sbjct: 343 AQYGLGR-------------------------------EAVTHFEEMRKCGVHLNQITFL 371
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRI--DLNHIVGGALINMYSRCGDIDKALQ-VFEEM 177
+L+ACS G ++ G+ M ++ + +++H V ++++ R G ++ AL +F+
Sbjct: 372 SILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYV--TVVDLLGRAGLLNDALVFIFKMP 429
Query: 178 KERDVTTYNSLIAGLAMH 195
+ + +L+ MH
Sbjct: 430 MKPTAAVWGALLGSCRMH 447
>gi|225463123|ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Vitis vinifera]
Length = 573
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/441 (43%), Positives = 280/441 (63%), Gaps = 2/441 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D++ T +I+ Y + G +++A VF + ++D W A+I GL + + + AL LF M+
Sbjct: 134 DILLGTTLIDAYAKCGDLDSAQRVFDEIPLRDVAAWNALIAGLAQGSKSSEALALFNRMR 193
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ + NE++++ L+ACSQLGAL G +H+ + K +D+N V A+I+MY++CG D
Sbjct: 194 AEGEKINEISVLGALAACSQLGALRAGEGVHACVRKMDLDINVQVCNAVIDMYAKCGFAD 253
Query: 169 KALQVFEEMK-ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
K +VF M + V T+N++I AMHG A+E+F EM + VT++ VL AC
Sbjct: 254 KGFRVFSTMTCGKSVVTWNTMIMAFAMHGDGCRALELFEEMGKTQVEMDSVTYLAVLCAC 313
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
+H GLV+ G +F M G+ ++HYG +VDLL R GR EAY I +M I PD ++
Sbjct: 314 NHAGLVEEGVRLFDEMV-GRGVNRNVKHYGSVVDLLGRAGRLGEAYRIINSMPIVPDVVL 372
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
SLL ACK +G +++ E +++L++ S G +VLLSN YA+ +W++ ++R MK
Sbjct: 373 WQSLLGACKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARERWEDVGRVREAMKS 432
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
V+K PG S IEV IH+F+ GD HP +IY K+ E++ +K GY T +VLHD
Sbjct: 433 RDVRKVPGFSYIEVEGVIHKFVNGDQSHPDWREIYAKLDEIRFRIKAFGYVAETSLVLHD 492
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
I + +KE AL HSE+LA+ +GLIST T IRV KNLR+C DCH +IKLI+ I ++II
Sbjct: 493 IGEEDKENALCHHSEKLAVAFGLISTSEGTPIRVNKNLRICGDCHVVIKLISKIYDQEII 552
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
VRDR RFH F++G+CSC DYW
Sbjct: 553 VRDRARFHRFKDGSCSCRDYW 573
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 139/273 (50%), Gaps = 12/273 (4%)
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
+ A++ GL R AL + + P+ +T L A ++ AL IHS++
Sbjct: 72 FNALLRGLARGPHPTHALTFLSTI----LHPDALTFSFSLIASARALALSETSQIHSHLL 127
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
+ + ++G LI+ Y++CGD+D A +VF+E+ RDV +N+LIAGLA +S EA+
Sbjct: 128 RRGCHADILLGTTLIDAYAKCGDLDSAQRVFDEIPLRDVAAWNALIAGLAQGSKSSEALA 187
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
+F M +G + +++ +G L ACS G + G E + R ++ ++ ++D+
Sbjct: 188 LFNRMRAEGEKINEISVLGALAACSQLGALRAG-EGVHACVRKMDLDINVQVCNAVIDMY 246
Query: 264 SRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG----KLQLGEQIAKRLLDCRSADS 319
++ G ++ + + M + +++ A +HG L+L E++ K ++ DS
Sbjct: 247 AKCGFADKGFRVFSTMTCGKSVVTWNTMIMAFAMHGDGCRALELFEEMGKTQVE---MDS 303
Query: 320 GTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
TY+ + A +G +E V++ +M GV +
Sbjct: 304 VTYLAVLCACNHAGLVEEGVRLFDEMVGRGVNR 336
>gi|218202317|gb|EEC84744.1| hypothetical protein OsI_31741 [Oryza sativa Indica Group]
Length = 563
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/488 (42%), Positives = 283/488 (57%), Gaps = 26/488 (5%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
++H K G S+R L+ Y CG DA ++FD E D VA ++ Y
Sbjct: 99 QLHSHAAKRGAASHRRVCNGLIHAYAVCGSLLDARKVFDRGHE-GDAVAWNSLLRGYAAA 157
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTIVCV 122
G V E F ++ +DTV W +I V NGE A+ +FREM P+ VT+
Sbjct: 158 GDVNALREFFVGMQARDTVSWNTIIAWCVENGEYEEAIAVFREMLASMECLPDRVTL--- 214
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM-KERD 181
+ GK I++ + ALINMYS+C I+ A+ VFE + + +
Sbjct: 215 ------------------FPGK-GIEVEERLSSALINMYSKCACIEGAVHVFENLGAQMN 255
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V T+N+++AG +G S +A+E+F M G+ P K+TF VLNACSHGG V+ G F+
Sbjct: 256 VDTWNAMLAGFTANGCSEKALELFARMEITGLVPNKITFNTVLNACSHGGFVEEGMGCFE 315
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
MT+ YGIEP I HYGC+VDL R G ++A I M + PD + +L+ ACK H
Sbjct: 316 RMTKVYGIEPDIAHYGCMVDLFCRAGLFDKAEKMIQMMPMKPDAAVWKALVGACKTHRNF 375
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LG + L++ D YVLLSN YA G W ++R M + GVQK PG SSIE+
Sbjct: 376 ELGRKAGHMLIEAAPNDHAGYVLLSNIYALDGNWTGVHKVRKLMLDRGVQKVPGSSSIEI 435
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE-KEWALAIH 420
+ IHEFI GD H +E IY+ + E+ Q +K+ GY P T VL DI+D + KE +LA+H
Sbjct: 436 DGVIHEFISGDKSHSSKEDIYEMLSEMCQQLKVAGYVPDTSHVLLDIDDEDVKESSLALH 495
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI +GLIST P T IR+ KNLRVC DCH+ +KL++ I R IIVRD NRFHHF G
Sbjct: 496 SEKLAIAFGLISTAPGTPIRIAKNLRVCGDCHNAVKLLSKIYGRCIIVRDANRFHHFREG 555
Query: 481 TCSCGDYW 488
+CSCGD+W
Sbjct: 556 SCSCGDFW 563
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 120/306 (39%), Gaps = 57/306 (18%)
Query: 100 ALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALIN 159
AL LF + R P+ V L C++ +HS+ K + V LI+
Sbjct: 62 ALRLFDHLLRSGADPDHVAYALALGRCARGRDHRAAAQLHSHAAKRGAASHRRVCNGLIH 121
Query: 160 MYSRCGDIDKALQVFEE-------------------------------MKERDVTTYNSL 188
Y+ CG + A +VF+ M+ RD ++N++
Sbjct: 122 AYAVCGSLLDARKVFDRGHEGDAVAWNSLLRGYAAAGDVNALREFFVGMQARDTVSWNTI 181
Query: 189 IAGLAMHGRSIEAVEMFREMI-NQGIRPTKVTFV-------------GVLNACSHGGLVD 234
IA +G EA+ +FREM+ + P +VT ++N S ++
Sbjct: 182 IAWCVENGEYEEAIAVFREMLASMECLPDRVTLFPGKGIEVEERLSSALINMYSKCACIE 241
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIA---PDHIMLGSL 291
+F+++ G + ++ + ++ + G E+A + M+I P+ I ++
Sbjct: 242 GAVHVFENL----GAQMNVDTWNAMLAGFTANGCSEKALELFARMEITGLVPNKITFNTV 297
Query: 292 LSACKIHGKLQLGEQIAKRLLDCRS--ADSGTYVLLSNAYASSGKWKEA---VQIRAKMK 346
L+AC G ++ G +R+ D Y + + + +G + +A +Q+
Sbjct: 298 LNACSHGGFVEEGMGCFERMTKVYGIEPDIAHYGCMVDLFCRAGLFDKAEKMIQMMPMKP 357
Query: 347 EAGVQK 352
+A V K
Sbjct: 358 DAAVWK 363
>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
Length = 668
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/488 (39%), Positives = 295/488 (60%), Gaps = 37/488 (7%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCG--EFKDAMQLFDEMPECNDVVASTVMINCYVE 62
IH V K+GL +++ Y K G + A +LFD M
Sbjct: 214 IHALVSKIGLDGQTGVANTIIDAYAKGGGHDLGAARKLFDMMD----------------- 256
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ--RDNVRPNEVTIV 120
+D V W MI +NG AL L+ +M +VR N VT+
Sbjct: 257 ----------------RDVVSWNTMIALYAQNGLSTEALGLYSKMLIVGGDVRCNAVTLS 300
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL AC+ GA++ G+ IH+ + + ++ N VG ++++MYS+CG ++ A + F+++K +
Sbjct: 301 AVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCGKVEMAWKAFQKIKGK 360
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
++ +++++IAG MHG EA+ +F +M G++P +TF+ VL ACSH GL+ G +
Sbjct: 361 NILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFITVLAACSHAGLLSEGRYWY 420
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+M ++GIEP +EHYGC+VDLL R G +EAY I MK+ PD + G+LLSAC+I+
Sbjct: 421 NTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAALWGALLSACRIYKN 480
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++L + A+RL + + +SG YVLLSN YA +G WKE ++R +K G++K PG SS+E
Sbjct: 481 VELAKICAERLFELDATNSGYYVLLSNIYAEAGMWKEVERMRVLVKTRGIEKPPGYSSVE 540
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+ + H F +GD HPQ ++IY +++L + + GY P+T VLHD++ E+E L IH
Sbjct: 541 LKGKTHLFYVGDKSHPQYKEIYAYLEKLLERIHDAGYVPNTGSVLHDLDVEERESMLRIH 600
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LA+ + L+++ + I V+KNLRVC DCH+ IK+I +T R+II+RD RFHHF++G
Sbjct: 601 SEKLAVAFALMNSVQGSVIHVIKNLRVCTDCHAAIKIITKLTGREIIIRDLKRFHHFKDG 660
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 661 LCSCGDYW 668
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 34/192 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ IH QV+++GL N +V++Y KCG+
Sbjct: 315 GKRIHNQVVRMGLEDNVYVGTSVVDMYSKCGK---------------------------- 346
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
VE A++ F ++K K+ + W+AMI G +G AL +F +M++ ++PN +T +
Sbjct: 347 ----VEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFIT 402
Query: 122 VLSACSQLGALELGR-WIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL+ACS G L GR W ++ + I+ G ++++ R G +D+A + +EMK +
Sbjct: 403 VLAACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVK 462
Query: 181 -DVTTYNSLIAG 191
D + +L++
Sbjct: 463 PDAALWGALLSA 474
>gi|224119910|ref|XP_002318193.1| predicted protein [Populus trichocarpa]
gi|222858866|gb|EEE96413.1| predicted protein [Populus trichocarpa]
Length = 533
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/487 (39%), Positives = 288/487 (59%), Gaps = 18/487 (3%)
Query: 13 GLRSNRSTRLKLVELYGKCGEFKDA---------MQLFDEMPECNDVVASTVMINCYVEH 63
GL ++ + + G+ G+ K+A L +E+ N ++A + +
Sbjct: 54 GLLADSIAVVSVASAVGQLGDVKNAHTVHGYAFRKSLIEELCVGNSILA------MHTKC 107
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
G E A VF + +D + W +M+ G +NG+ AL LF EM+ + +P VT + ++
Sbjct: 108 GNTEKARLVFDMMMERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMV 167
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK--ERD 181
SAC+ LG LGR H ++ R++++ + AL++MY++CGD++KA+ +F + ER+
Sbjct: 168 SACAYLGFRHLGRKFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERN 227
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
++N LI+G MHG EA+E+F M +G+ P TF +L+ACSH GL+D G + F
Sbjct: 228 AGSWNVLISGYGMHGHGKEALELFSRMQEEGVEPNHFTFTSILSACSHAGLIDEGRKCFA 287
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M R + + +H+ C+VD+L R G +EA+D I M P + G+LL ACKIHG +
Sbjct: 288 EMKR-LSVTLEDKHHACVVDMLGRAGLLQEAFDLIKEMPSPPSDGVWGALLLACKIHGNM 346
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LG+ A LL +G YVL+SN YA+S KWKE ++R MK G++K S IE
Sbjct: 347 ELGKTAASNLLQLEPNHTGYYVLMSNIYAASNKWKEVWKLRQDMKNKGLKKPAAFSMIEY 406
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+I F D +P R ++YKKM+ L +K+ GY P LHD+E+ +KE L HS
Sbjct: 407 GKDILGFHTADQENPYRHEVYKKMESLAIEMKMAGYVPDLSCALHDVEEEDKERMLNYHS 466
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ +G++ P IRV KNLRVCNDCHS K I++I +RKIIVRD NRFHHF+ GT
Sbjct: 467 EKLAVAFGVLKIDPGMVIRVTKNLRVCNDCHSAFKYISHIYQRKIIVRDANRFHHFQGGT 526
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 527 CSCKDYW 533
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 149/293 (50%), Gaps = 35/293 (11%)
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVT 118
Y + GL + ++F + KD VCWTAMI + + AL LF++MQ++ + + +
Sbjct: 2 YAKCGLFVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSIA 61
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
+V V SA QLG ++ +H Y + + VG +++ M+++CG+ +KA VF+ M
Sbjct: 62 VVSVASAVGQLGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMMM 121
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
ERDV ++NS+++G +G++ EA+ +F EM + +PT VT + +++AC++ G LG +
Sbjct: 122 ERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGRK 181
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
F D +E ++D+ ++ G E+A D I P
Sbjct: 182 -FHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNG--IPP--------------- 223
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
++G++ +L + Y G KEA+++ ++M+E GV+
Sbjct: 224 ----------------TERNAGSWNVLISGYGMHGHGKEALELFSRMQEEGVE 260
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 33/197 (16%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVAS-TVMINCY 60
GR+ H ++ + + + L+++Y KCG+ + A+ LF+ +P S V+I+ Y
Sbjct: 179 GRKFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGY 238
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG + A E+FSR MQ + V PN T
Sbjct: 239 GMHGHGKEALELFSR-------------------------------MQEEGVEPNHFTFT 267
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+LSACS G ++ GR + M + + L +++M R G + +A + +EM
Sbjct: 268 SILSACSHAGLIDEGRKCFAEMKRLSVTLEDKHHACVVDMLGRAGLLQEAFDLIKEMPSP 327
Query: 181 DVT-TYNSLIAGLAMHG 196
+ +L+ +HG
Sbjct: 328 PSDGVWGALLLACKIHG 344
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/484 (38%), Positives = 300/484 (61%), Gaps = 3/484 (0%)
Query: 8 QVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQL---FDEMPECNDVVASTVMINCYVEHG 64
+++K ++ + T + L+ + + G+ +L +M +++V S +++ Y + G
Sbjct: 465 KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCG 524
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
+ ++ +VF +K +D + W +I V + + L + M+ + V P+ T++ +L
Sbjct: 525 EMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILP 584
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
CS L A G+ IH + K ++ + VG LI MYS+CG + + QVF+ MK +DV T
Sbjct: 585 VCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVT 644
Query: 185 YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT 244
+ +LI+ M+G +AV F EM GI P V FV ++ ACSH GLV+ G F M
Sbjct: 645 WTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMK 704
Query: 245 RDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLG 304
+DY IEP+IEHY C+VDLLSR ++A DFI +M + PD + G+LLSAC++ G ++
Sbjct: 705 KDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIA 764
Query: 305 EQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNE 364
+++++R+++ D+G YVL+SN YA+ GKW + IR +K G++K+PGCS +E+ N+
Sbjct: 765 QRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNK 824
Query: 365 IHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERL 424
++ F G Q E++ K + L ++ EGY + + VLHDI++ EK L HSERL
Sbjct: 825 VYVFGTGTKFSEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERL 884
Query: 425 AICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSC 484
AI +GL++TKP T ++V+KNLRVC DCH++ K I+ I +R+++VRD NRFH F++G CSC
Sbjct: 885 AIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIXQRELLVRDANRFHVFKDGACSC 944
Query: 485 GDYW 488
GDYW
Sbjct: 945 GDYW 948
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 150/334 (44%), Gaps = 36/334 (10%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTV-CWTAMIDGLVRNGEMARALDLFRE 106
+ V+ S +I Y ++F VF + V W ++I L NG + AL L+ E
Sbjct: 105 HSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSE 164
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
QR ++P+ T V++AC+ L E+ + IH + + +G ALI+MY R D
Sbjct: 165 TQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFND 224
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+DKA +VFEEM RDV ++NSLI+G +G EA+E++ N G+ P T VL A
Sbjct: 225 LDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRA 284
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQI-------------------------------EH 255
C G V+ G +I + GI+ +
Sbjct: 285 CGGLGSVEEG-DIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVS 343
Query: 256 YGCIVDLLSRVGRPEEAYDFITNM--KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
+ ++ S+VG EE+ M + PD + + S+L AC G L+ G+ + ++
Sbjct: 344 WNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMIT 403
Query: 314 C-RSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
D+ +L N YA G + ++ + MK
Sbjct: 404 SGYECDTTASNILINMYAKCGNLLASQEVFSGMK 437
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 192/435 (44%), Gaps = 29/435 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDE---MPECNDVVASTVMI 57
E ++ + ++ L+ + T ++ +F+ A + D M +D+ +I
Sbjct: 157 EALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALI 216
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y ++ A +VF + ++D V W ++I G NG AL+++ + V P+
Sbjct: 217 DMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSY 276
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T+ VL AC LG++E G IH + K I + IV L++MY + + ++F++M
Sbjct: 277 TMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKM 336
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
RD ++N++I G + G E++++F EM+NQ +P +T +L AC H G ++ G
Sbjct: 337 VLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGK 395
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
+ M G E ++++ ++ G + + + MK D + S+++
Sbjct: 396 YVHDYMITS-GYECDTTASNILINMYAKCGNLLASQEVFSGMK-CKDSVSWNSMINVYIQ 453
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
+G ++ K + DS TYV+L + G ++ + + G S
Sbjct: 454 NGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFN-----S 508
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
+I V+N + + +Y K E+ +K+ + DI W A
Sbjct: 509 NIVVSNTLVD-------------MYAKCGEMGDSLKV-----FENMKARDIITWNTIIAS 550
Query: 418 AIHSERLAICYGLIS 432
+HSE + +IS
Sbjct: 551 CVHSEDCNLGLRMIS 565
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 34/198 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+EIHG + KLGL S+ L+E+Y KCG +++ Q+F M
Sbjct: 594 QGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLM---------------- 637
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
K KD V WTA+I GE +A+ F EM+ + P+ V V
Sbjct: 638 ----------------KTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFV 681
Query: 121 CVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
++ ACS G +E G + H ++I+ ++++ SR +DKA M
Sbjct: 682 AIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPL 741
Query: 180 R-DVTTYNSLIAGLAMHG 196
+ D + + +L++ M G
Sbjct: 742 KPDSSIWGALLSACRMSG 759
>gi|296085848|emb|CBI31172.3| unnamed protein product [Vitis vinifera]
Length = 644
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/526 (37%), Positives = 311/526 (59%), Gaps = 45/526 (8%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDA---MQLFDEMPECNDVVASTVMIN 58
G +HG +++LG+ + T L+ +Y K ++ ++FDE + +DV + +
Sbjct: 125 GESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDE-GKTSDVYSKKEKES 183
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVT 118
Y+ G + FE+ + +D V W +I G +NG AL + REM ++RP+ T
Sbjct: 184 YYL--GSLRKVFEMMPK---RDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFT 238
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
+ VL ++ L G+ IH Y ++ D + +G +LI+MY++C +D + +VF +
Sbjct: 239 LSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLP 298
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMI----------------------------- 209
+ D ++NS+IAG +G E ++ F++M+
Sbjct: 299 QHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQ 358
Query: 210 -------NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDL 262
+G++P V F+ VL ACSH GLVD ++ F SMT+DY I P +EHY + DL
Sbjct: 359 LHGYIIRMEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADL 418
Query: 263 LSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTY 322
L RVGR EEAY+FI++M I P + +LL+AC++H ++L E+++K+L + G Y
Sbjct: 419 LGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAY 478
Query: 323 VLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIY 382
VLLSN Y+++G+WK+A ++R M++ G++K+P CS IE+ N++H F+ GD HP ++I
Sbjct: 479 VLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRIN 538
Query: 383 KKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVV 442
+ ++ L + ++ EGY T VLHD+E+ +K + L HSERLAI +G+IST TTIRV
Sbjct: 539 EALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVT 598
Query: 443 KNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
KNLRVC DCH+ K I+ I R+I+VRD +RFHHF++G CSCGD+W
Sbjct: 599 KNLRVCVDCHTATKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 644
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 138/374 (36%), Gaps = 104/374 (27%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+ +++H Q+L+ L S S ++ +Y D++ +F+ +P +A +I CY
Sbjct: 23 QAKQLHAQILRTSLPS-PSLLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCY 81
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HGL +L F +M P+
Sbjct: 82 TSHGL-------------------------------FLHSLSFFIQMLASGKYPDHNVFP 110
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA---------- 170
VL +C+ + L G +H + + + + AL+NMYS+ +++
Sbjct: 111 SVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEG 170
Query: 171 -------------------LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ 211
+VFE M +RD+ ++N++I+G A +G +A+ M REM N
Sbjct: 171 KTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNA 230
Query: 212 GIRPTKVTFVGVLNACS-----------HGGLVDLGFE---------------------- 238
+RP T VL + HG + G++
Sbjct: 231 DLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDS 290
Query: 239 --IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLS 293
+F + + GI GC+ + G +E F M KI P+H+ S++
Sbjct: 291 CRVFYMLPQHDGISWNSIIAGCVQN-----GMFDEGLKFFQQMLIAKIKPNHVSFSSIMP 345
Query: 294 ACKIHGKLQLGEQI 307
AC L LG+Q+
Sbjct: 346 ACAHLTTLHLGKQL 359
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 124/279 (44%), Gaps = 45/279 (16%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+EIHG ++ G ++ L+++Y KC D+ ++F +P+ + + ++++ C
Sbjct: 254 KGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGC- 312
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V+NG L F++M ++PN V+
Sbjct: 313 -------------------------------VQNGMFDEGLKFFQQMLIAKIKPNHVSFS 341
Query: 121 CVLSACSQLGALELGRWIHSYMGKHR-IDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
++ AC+ L L LG+ +H Y+ + + N++ A++ S G +D+A + F M +
Sbjct: 342 SIMPACAHLTTLHLGKQLHGYIIRMEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQ 401
Query: 180 -----RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
+ Y ++ L GR EA E +M I PT + +L AC ++
Sbjct: 402 DYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDM---HIEPTGSVWSTLLAACRVHKNIE 458
Query: 235 LGFEIFQSMTRDYGIEPQ-IEHYGCIVDLLSRVGRPEEA 272
L ++ + + + ++PQ I Y + ++ S GR ++A
Sbjct: 459 LAEKVSKKL---FTVDPQNIGAYVLLSNIYSAAGRWKDA 494
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/441 (42%), Positives = 280/441 (63%), Gaps = 1/441 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D+ +++ Y + G V++A VF R++V+D+V W +MI +NG AL L R+M
Sbjct: 197 DMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCRDMA 256
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ V P T+V +SA + AL GR +H + + D + +L++MY++ G +
Sbjct: 257 ANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTSLVDMYAKSGWVQ 316
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM-INQGIRPTKVTFVGVLNAC 227
A +FE++ +R++ ++N++I G MHG EA+++F +M + + P +TFVGVL+AC
Sbjct: 317 VARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSAC 376
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
+HGG+V E F M Y I+P ++H+ C+VD+L GR EEAYD I M + PD +
Sbjct: 377 NHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGMPMQPDSGI 436
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
G+LL+ CKIH ++LGE ++L++ D+G YVLLSN YA SGKW++A ++R M
Sbjct: 437 WGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIYAQSGKWEKAARVRKLMTN 496
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
G++K GCS IE+ + H F++GD HP+ +IY++++ L+ ++ GY P T V HD
Sbjct: 497 RGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEELERLEGLMSDAGYMPDTMPVFHD 556
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
+ D EK + HSERLAI +GLIST T + V KNLRVC DCH +IKLI+ I +R+II
Sbjct: 557 VGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTKNLRVCEDCHVVIKLISQIVQREII 616
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
+RD NR+HHF NG CSC DYW
Sbjct: 617 IRDVNRYHHFVNGECSCKDYW 637
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 196/469 (41%), Gaps = 90/469 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++HG++L GL + KLV+LY C
Sbjct: 81 GRQLHGRLLVSGLGPDTVLATKLVDLYAAC------------------------------ 110
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
GLV +A +F + ++ W +I R+G A+ L+R M V P+ T
Sbjct: 111 --GLVGHARRLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPL 168
Query: 122 VLSACSQLGALELGRWIHS-YMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
L AC+ L LE GR +H +G H + + V L++MY++CG +D A VF+ ++ R
Sbjct: 169 ALKACAALLDLETGREVHERVLGTHWGE-DMFVCAGLVDMYAKCGCVDDARAVFDRIRVR 227
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D +NS+IA +GR +EA+ + R+M G+ PT T V ++A + + G E+
Sbjct: 228 DSVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELH 287
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRV-------------------------------GRP 269
R G + Q + +VD+ ++ G
Sbjct: 288 GFGWRR-GFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHF 346
Query: 270 EEAYDFITNMK----IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT--YV 323
+EA M+ + PD+I +LSAC G ++ ++ ++D S +
Sbjct: 347 DEALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFT 406
Query: 324 LLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNN-EIHEFI-LGDIRHPQREQI 381
L + +G+++EA + +K +Q + G +N +IH+ + LG++
Sbjct: 407 CLVDVLGHAGRFEEAYDL---IKGMPMQPDSGIWGALLNGCKIHKNVELGEL-------- 455
Query: 382 YKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGL 430
L+++++LE V+L +I +W A +L GL
Sbjct: 456 -----ALQKLIELEPEDAGNYVLLSNIYAQSGKWEKAARVRKLMTNRGL 499
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 113/262 (43%), Gaps = 18/262 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GRE+HG + G + LV++Y K G + A LF+++ + ++V+ MI Y
Sbjct: 283 GRELHGFGWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMK-RELVSWNAMICGYG 341
Query: 62 EHGLVENAFEVFSRVKVK-----DTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPN 115
HG + A ++F++++V+ D + + ++ G + A + F M +++P
Sbjct: 342 MHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPT 401
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALIN---MYSRCGDIDKALQ 172
C++ G E + + + + + GAL+N ++ + ALQ
Sbjct: 402 VQHFTCLVDVLGHAGRFEEA---YDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQ 458
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
E++ D Y L A G+ +A + + M N+G++ L +HG L
Sbjct: 459 KLIELEPEDAGNYVLLSNIYAQSGKWEKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFL 518
Query: 233 V-----DLGFEIFQSMTRDYGI 249
V EI++ + R G+
Sbjct: 519 VGDASHPRSAEIYEELERLEGL 540
>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/488 (39%), Positives = 289/488 (59%), Gaps = 2/488 (0%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H + L + + LV++Y K +FD + E + + + T MI+ Y
Sbjct: 130 GKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSI-SWTAMISGYA 188
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR-PNEVTIV 120
G A E+F K+ WTA+I GLV++G AL LF EM+R+ V + + +
Sbjct: 189 RSGRKLEALELFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLS 248
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+ AC+ ELG+ +H + + + AL++MY++C D+ A +F EM+ +
Sbjct: 249 SVVGACANSAVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRK 308
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++ S+I G A HG + EA+ ++ +M+ G++P +VTFVG++ ACSH GLV G +F
Sbjct: 309 DVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALF 368
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+SM D+GI P ++HY C++DL SR G +EA + I M + PD +LLSACK HG
Sbjct: 369 KSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGN 428
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++ +IA LLD + D +Y+LLSN YA +G W+ +R M V+K PG S ++
Sbjct: 429 TKMAVRIADHLLDLKPEDPSSYILLSNIYAGAGMWENVSMVRKLMAVKEVKKVPGYSCVD 488
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+ E F G+ P +++I M +L ++ GY P T VL D++ EKE L H
Sbjct: 489 LGREFQVFHAGEASQPMKDEILGLMTKLDSEMRRRGYVPDTSSVLLDMDQQEKERQLFWH 548
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLA+ YGL+ P TTIR+VKNLRVC DCH+++KLI+ IT R+I VRD R+HHF++G
Sbjct: 549 SERLALAYGLLKAVPGTTIRIVKNLRVCGDCHTVLKLISAITSREIYVRDVKRYHHFKDG 608
Query: 481 TCSCGDYW 488
CSC D+W
Sbjct: 609 KCSCNDFW 616
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 96/208 (46%), Gaps = 34/208 (16%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
+++H Q++K GL + L++ YGKCG
Sbjct: 27 AKKLHAQIIKSGLNHHHPFPKTLIDAYGKCG----------------------------- 57
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
L+++A ++F + +D V W ++ + +A + + + ++P+
Sbjct: 58 ---LLKDALKLFDALPQQDHVAWATVLSACNLSNLPHKAFSISLPILHEGLQPDHFVFSS 114
Query: 122 VLSACSQLGA--LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
++ AC+ LG+ ++LG+ +H+ + +V +L++MY++ D VF+ + E
Sbjct: 115 LIKACANLGSVHVKLGKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFE 174
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFRE 207
++ ++I+G A GR +EA+E+FRE
Sbjct: 175 LSSISWTAMISGYARSGRKLEALELFRE 202
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/240 (19%), Positives = 107/240 (44%), Gaps = 18/240 (7%)
Query: 122 VLSACSQLGALE-----LGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
VL+ SQL +L + + +H+ + K ++ +H LI+ Y +CG + AL++F+
Sbjct: 9 VLALKSQLFSLGRKNPFIAKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDA 68
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
+ ++D + ++++ + +A + ++++G++P F ++ AC++ G V +
Sbjct: 69 LPQQDHVAWATVLSACNLSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHV- 127
Query: 237 FEIFQSMTRDYGIEPQIEH---YGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLS 293
++ + + + + P E +VD+ ++ P+ ++ L S+
Sbjct: 128 -KLGKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSI------FELSSISW 180
Query: 294 ACKIHGKLQLGEQIAKRLLDCRSADSGTY--VLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
I G + G ++ L S Y L + SG +A+ + +M+ GV
Sbjct: 181 TAMISGYARSGRKLEALELFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVS 240
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/438 (43%), Positives = 278/438 (63%), Gaps = 4/438 (0%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ---RD 110
T +++ Y + G V A VF + K+ V W+AMI +N +AL+LF+ M D
Sbjct: 222 TTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHD 281
Query: 111 NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
+V PN VT+V VL AC+ L ALE G+ IH Y+ + +D V ALI MY RCG+I
Sbjct: 282 SV-PNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMG 340
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
+VF+ MK RDV ++NSLI+ MHG +A+++F MI+QG P+ ++F+ VL ACSH
Sbjct: 341 QRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHA 400
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGS 290
GLV+ G +F+SM Y I P +EHY C+VDLL R R +EA I +M P + GS
Sbjct: 401 GLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFEPGPTVWGS 460
Query: 291 LLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
LL +C+IH ++L E+ + L + ++G YVLL++ YA + W EA + ++ G+
Sbjct: 461 LLGSCRIHCNVELAERASTLLFELEPRNAGNYVLLADIYAEAKMWSEAKSVMKLLEARGL 520
Query: 351 QKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIED 410
QK PGCS IEV +++ F+ D +PQ E+I+ + +L +K +GY P T VVL+D+++
Sbjct: 521 QKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDLDE 580
Query: 411 WEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRD 470
EKE + HSE+LA+ +GLI+T TIR+ KNLR+C DCH++ K I+ R+I+VRD
Sbjct: 581 EEKERIVLGHSEKLAVAFGLINTVKGETIRIRKNLRLCEDCHAVTKFISKFANREILVRD 640
Query: 471 RNRFHHFENGTCSCGDYW 488
NRFHHF++G CSCGDYW
Sbjct: 641 VNRFHHFKDGVCSCGDYW 658
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 130/277 (46%), Gaps = 8/277 (2%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D +T +IN Y E G ++ A +VF + + W A+ L G LDL+ +M
Sbjct: 112 DPFLATKLINMYYELGSIDRARKVFDETRERTIYVWNALFRALAMVGCGKELLDLYVQMN 171
Query: 109 RDNVRPNEVTIVCVLSACS----QLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC 164
+ + T VL AC + L+ G+ IH+++ +H + N V L+++Y++
Sbjct: 172 WIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKF 231
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG--IRPTKVTFVG 222
G + A VF M ++ +++++IA A + ++A+E+F+ M+ + P VT V
Sbjct: 232 GSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVN 291
Query: 223 VLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIA 282
VL AC+ ++ G I + R G++ + ++ + R G NMK
Sbjct: 292 VLQACAGLAALEQGKLIHGYILRR-GLDSILPVLNALITMYGRCGEILMGQRVFDNMK-N 349
Query: 283 PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADS 319
D + SL+S +HG + QI + ++ S+ S
Sbjct: 350 RDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPS 386
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 9/185 (4%)
Query: 87 MIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHR 146
+I L + G + +A+ L P + T ++ +C+Q +L G +H +
Sbjct: 53 LIQSLCKGGNLKQAIHLLC----CEPNPTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSG 108
Query: 147 IDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
D + + LINMY G ID+A +VF+E +ER + +N+L LAM G E ++++
Sbjct: 109 FDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYVWNALFRALAMVGCGKELLDLYV 168
Query: 207 EMINQGIRPTKVTFVGVLNACSHGGL----VDLGFEIFQSMTRDYGIEPQIEHYGCIVDL 262
+M GI + T+ VL AC L + G EI + R +G E I ++D+
Sbjct: 169 QMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILR-HGYEANIHVMTTLLDV 227
Query: 263 LSRVG 267
++ G
Sbjct: 228 YAKFG 232
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 34/197 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ IHG +L+ GL S L+ +YG+CGE ++FD M DVV+ +I+ Y
Sbjct: 304 QGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKN-RDVVSWNSLISIY 362
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG + A ++F + ++ G P+ ++ +
Sbjct: 363 GMHGFGKKAIQIF---------------ENMIHQGS----------------SPSYISFI 391
Query: 121 CVLSACSQLGALELGRWI-HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
VL ACS G +E G+ + S + K+RI ++++ R +D+A+++ E+M
Sbjct: 392 TVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHF 451
Query: 179 ERDVTTYNSLIAGLAMH 195
E T + SL+ +H
Sbjct: 452 EPGPTVWGSLLGSCRIH 468
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/486 (39%), Positives = 288/486 (59%), Gaps = 34/486 (6%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
+++H ++K+GL S+ R L+++Y K GE +A+++F EM
Sbjct: 403 KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREM------------------ 444
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
D+V W ++I ++ + AL L++ M+R ++ T+ V
Sbjct: 445 --------------MTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSV 490
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L AC+ L LELGR H ++ K DL I+ AL++MY +CG ++ A +F M ++DV
Sbjct: 491 LRACTSLSLLELGRQAHVHVLKFDQDL--ILNNALLDMYCKCGSLEDAKFIFNRMAKKDV 548
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
+++++IAGLA +G S+EA+ +F M QG +P +T +GVL ACSH GLV+ G+ F+S
Sbjct: 549 ISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRS 608
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
M YGI+P EHYGC++DLL R + ++ I M PD + +LL AC+ +
Sbjct: 609 MNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVD 668
Query: 303 LGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVN 362
L AK +L D+G YVLLSN YA S +W + ++R MK+ G++KEPGCS IEVN
Sbjct: 669 LATYAAKEILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVN 728
Query: 363 NEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSE 422
+IH FILGD HPQ ++I +++ + + GY P T VL D+E ++E +L HSE
Sbjct: 729 KQIHAFILGDKSHPQIDEINRQLNQFICRLAGAGYVPDTNFVLQDLEGEQREDSLRYHSE 788
Query: 423 RLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTC 482
+LAI +G++S TIR+ KNL++C DCH KLIA + +R I++RD R+HHF++G C
Sbjct: 789 KLAIVFGIMSFPKEKTIRIWKNLKICGDCHKFAKLIAELEQRHIVIRDPIRYHHFQDGVC 848
Query: 483 SCGDYW 488
SCGDYW
Sbjct: 849 SCGDYW 854
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 124/247 (50%), Gaps = 7/247 (2%)
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
+ ++IN YV+ L+E A +F ++ ++ V WT MI RA+ L M RD V
Sbjct: 323 TNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGV 382
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
PN T VL AC +L L + +HS++ K ++ + V ALI++YS+ G++ +AL+
Sbjct: 383 MPNMFTFSSVLRACERLYDL---KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALK 439
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
VF EM D +NS+IA A H EA+ +++ M G + T VL AC+ L
Sbjct: 440 VFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSL 499
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
++LG Q+ + + ++D+ + G E+A FI N D I +++
Sbjct: 500 LELG---RQAHVHVLKFDQDLILNNALLDMYCKCGSLEDA-KFIFNRMAKKDVISWSTMI 555
Query: 293 SACKIHG 299
+ +G
Sbjct: 556 AGLAQNG 562
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 5/204 (2%)
Query: 96 EMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGG 155
++ A+ + M+R V + +T ++ C GA+ G+ +H ++ + +
Sbjct: 265 DLPSAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTN 324
Query: 156 ALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRP 215
LINMY + +++A +F++M ER+V ++ ++I+ + + A+ + M G+ P
Sbjct: 325 ILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMP 384
Query: 216 TKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDF 275
TF VL AC L DL + S G+E + ++D+ S++G EA
Sbjct: 385 NMFTFSSVLRACER--LYDL--KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKV 440
Query: 276 ITNMKIAPDHIMLGSLLSACKIHG 299
M + D ++ S+++A H
Sbjct: 441 FREM-MTGDSVVWNSIIAAFAQHS 463
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/441 (42%), Positives = 281/441 (63%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
D+ A +++ Y + GL++ A +F ++ VKDTV ++A++ G V+NG+ A +FR+M
Sbjct: 368 TDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKM 427
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
Q NV+P+ T+V ++ ACS L AL+ G+ H + I + ALI+MY++CG I
Sbjct: 428 QACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRI 487
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
D + Q+F+ M RD+ ++N++IAG +HG EA +F +M +Q P VTF+ +++AC
Sbjct: 488 DLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISAC 547
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SH GLV G F M YGI P++EHY +VDLL+R G +EAY FI M + D +
Sbjct: 548 SHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRV 607
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
G+LL AC++H + LG+Q++ + +G +VLLSN ++++G++ EA ++R KE
Sbjct: 608 WGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKE 667
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
G +K PGCS IE+N +H FI GD H Q +IY+++ + + GY T VL D
Sbjct: 668 QGFKKSPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNILVDINKLGYRADTSFVLQD 727
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
+E+ EKE AL HSE+LAI +G+++ TI V KNLRVC DCH++IK + + KR II
Sbjct: 728 VEEEEKEKALLYHSEKLAIAFGVLTLSEDKTIFVTKNLRVCGDCHTVIKYMTLVRKRAII 787
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
VRD NRFHHF+NG CSCGD+W
Sbjct: 788 VRDANRFHHFKNGQCSCGDFW 808
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 150/295 (50%), Gaps = 10/295 (3%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+ V+ T +++ Y + G + A VF + V++ V W+A++ G V G M A LF++M
Sbjct: 266 DGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDM 325
Query: 108 QRDNV-RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
+ + ++ L AC+ L L LG+ +H+ + K + + G +L++MY++ G
Sbjct: 326 LAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGL 385
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
ID+A +F++M +D +Y++L++G +G++ EA +FR+M ++P T V ++ A
Sbjct: 386 IDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPA 445
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
CSH + G + GI + ++D+ ++ GR + + M A D +
Sbjct: 446 CSHLAALQHG-KCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMP-ARDIV 503
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCR----SADSGTYVLLSNAYASSGKWKE 337
++++ IHG LG++ LD + D T++ L +A + SG E
Sbjct: 504 SWNTMIAGYGIHG---LGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTE 555
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 150/326 (46%), Gaps = 54/326 (16%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D+ ST +++ Y + +A VF R+ +D V W AM+ G +G+ + + MQ
Sbjct: 163 DLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLAGYALHGKYSDTIACLLLMQ 222
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH----IVGGALINMYSRC 164
D+ PN T+V +L +Q GAL GR +H+Y + +H +VG AL++MY++C
Sbjct: 223 DDHA-PNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKC 281
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG---IRPTKVTFV 221
G + A +VFE M R+ T+++L+ G + GR +EA +F++M+ QG + PT V
Sbjct: 282 GHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVA-- 339
Query: 222 GVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKI 281
L AC++ + LG ++ + + G+ + ++ + ++ G ++A M +
Sbjct: 340 SALRACANLSDLCLGKQLHALLAKS-GLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVV 398
Query: 282 APDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQI 341
D+ +Y L + Y +GK EA ++
Sbjct: 399 -----------------------------------KDTVSYSALVSGYVQNGKADEAFRV 423
Query: 342 RAKMKEAGVQKE--------PGCSSI 359
KM+ VQ + P CS +
Sbjct: 424 FRKMQACNVQPDVATMVSLIPACSHL 449
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 110/243 (45%), Gaps = 39/243 (16%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
G+ HG V+ G+ S S L+++Y KCG + Q+FD MP D+V+ MI Y
Sbjct: 454 HGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPA-RDIVSWNTMIAGY 512
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HGL G+ A A LF +M+ P++VT +
Sbjct: 513 GIHGL-----------------------------GKEATA--LFLDMKHQACEPDDVTFI 541
Query: 121 CVLSACSQLGALELG-RWIHSYMGKHRID--LNHIVGGALINMYSRCGDIDKALQVFEEM 177
C++SACS G + G RW H K+ I + H +G ++++ +R G +D+A Q + M
Sbjct: 542 CLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIG--MVDLLARGGFLDEAYQFIQGM 599
Query: 178 K-ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
+ DV + +L+ +H ++I+ + MI Q FV + N S G D
Sbjct: 600 PLKADVRVWGALLGACRVH-KNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEA 658
Query: 237 FEI 239
E+
Sbjct: 659 AEV 661
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 57 INCYVEH-----GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN 111
I C ++H G + A +F ++ + A+I G +R
Sbjct: 65 IICQIDHNRMICGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRL 124
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
+PN T VL ACS L L R +H + + + + V AL+++Y++C A
Sbjct: 125 PQPNNYTFPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAA 184
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
VF M RDV +N+++AG A+HG+ + + M + P T V +L + G
Sbjct: 185 TVFRRMPARDVVAWNAMLAGYALHGKYSDTIACLLLMQDDH-APNASTLVALLPLLAQHG 243
Query: 232 LVDLG 236
+ G
Sbjct: 244 ALSQG 248
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/509 (41%), Positives = 294/509 (57%), Gaps = 44/509 (8%)
Query: 9 VLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPEC---NDVVASTVMINCYVEHGL 65
V +LGL N T ++ +C F D + + + D +++ Y G
Sbjct: 381 VFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGR 440
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR--------------DN 111
+E A +F + KD V W MI G V G AL+L +MQR DN
Sbjct: 441 IEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDN 500
Query: 112 ----VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
++PN VT++ VL C+ L AL G+ IH+Y K + + VG AL++MY++CG +
Sbjct: 501 KNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCL 560
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-----IRPTKVTFVG 222
+ + VFE+M R+V T+N LI MHG+ EA+++FR M+ +G IRP +VT++
Sbjct: 561 NLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIA 620
Query: 223 VLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIA 282
+ + SH G+VD G +F +M +GIEP +HY C+VDLL R G+ EEAY+ I M
Sbjct: 621 IFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSN 680
Query: 283 PDHI-MLGSLLSACKIHGKLQLGEQIAKRL--LDCRSADSGTYVLLSNAYASSGKWKEAV 339
+ SLL ACKIH L++GE AK L LD D GT K+++
Sbjct: 681 MKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVLDPNVLDYGT--------------KQSM 726
Query: 340 QIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSP 399
R KMKE GV+KEPGCS IE +E+H+F+ GD+ HPQ +++++ ++ L +K EGY P
Sbjct: 727 LGR-KMKEKGVRKEPGCSWIEHGDEVHKFLAGDVSHPQSKEVHEYLETLSLRMKKEGYVP 785
Query: 400 STEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIA 459
T VLH++ + EKE L HSERLAI +GL++T P TTIRV KNLRVCNDCH K I+
Sbjct: 786 DTSCVLHNVGEEEKETMLCGHSERLAIAFGLLNTSPGTTIRVAKNLRVCNDCHVATKFIS 845
Query: 460 NITKRKIIVRDRNRFHHFENGTCSCGDYW 488
I R+II+RD RFHHF NGTCSCGDYW
Sbjct: 846 KIVDREIILRDVRRFHHFRNGTCSCGDYW 874
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 130/275 (47%), Gaps = 40/275 (14%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H V K G + LV +YGKCG+
Sbjct: 104 GKQLHAHVFKFGQALPTAVPNSLVNMYGKCGD---------------------------- 135
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ A VF + +D V W +MI+ R E A+ LFR M +NV P T+V
Sbjct: 136 ----IDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVS 191
Query: 122 VLSACSQL-GALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V ACS L L LG+ +H+++ ++ D AL+ MY++ G + +A +F+ ++
Sbjct: 192 VAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDK 250
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI- 239
D+ ++N++I+ L+ + R EA+ M+ G+RP VT VL ACSH ++ G EI
Sbjct: 251 DLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIH 310
Query: 240 -FQSMTRDYGIEPQIEHYGC-IVDLLSRVGRPEEA 272
F M D IE GC +VD+ +PE+
Sbjct: 311 AFVLMNNDL-IENSF--VGCALVDMYCNCKQPEKG 342
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 110/232 (47%), Gaps = 5/232 (2%)
Query: 52 ASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN 111
+ ++ Y + G V A +F KD V W +I L +N AL M +
Sbjct: 223 TNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSG 282
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSY--MGKHRIDLNHIVGGALINMYSRCGDIDK 169
VRPN VT+ VL ACS L L G+ IH++ M I+ N VG AL++MY C +K
Sbjct: 283 VRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIE-NSFVGCALVDMYCNCKQPEK 341
Query: 170 ALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ-GIRPTKVTFVGVLNACS 228
VF+ M R + +N++IAG + EA+E+F EM+ + G+ P VT VL AC
Sbjct: 342 GRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACV 401
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
L E S +G E ++D+ SR+GR E A +M
Sbjct: 402 RCESF-LDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMN 452
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 113/248 (45%), Gaps = 35/248 (14%)
Query: 99 RALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALI 158
+A+ + M V P+ VL A + + L LG+ +H+++ K L V +L+
Sbjct: 68 QAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLV 127
Query: 159 NMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKV 218
NMY +CGDID A +VF+E+ RD ++NS+I AV +FR M+ + + PT
Sbjct: 128 NMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSF 187
Query: 219 TFVGVLNACSH--GGLVDLGFEIFQSMTR-----------------------------DY 247
T V V +ACS+ GL+ LG ++ + R D
Sbjct: 188 TLVSVAHACSNLINGLL-LGKQVHAFVLRNGDWRTFTNNALVTMYAKLGRVYEAKTLFDV 246
Query: 248 GIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLG 304
+ + + I+ LS+ R EEA ++ M + P+ + L S+L AC L G
Sbjct: 247 FDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCG 306
Query: 305 EQIAKRLL 312
++I +L
Sbjct: 307 KEIHAFVL 314
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 30/198 (15%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+EIH +K L + + LV++Y KCG + +F++M +V+ V+I Y
Sbjct: 527 KGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQM-SVRNVITWNVLIMAY 585
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG E A ++F R +V G+ R +RPNEVT +
Sbjct: 586 GMHGKGEEALKLFRR---------------MVEEGDNNR-----------EIRPNEVTYI 619
Query: 121 CVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+ ++ S G ++ G ++ KH I+ L+++ R G I++A + + M
Sbjct: 620 AIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPS 679
Query: 180 --RDVTTYNSLIAGLAMH 195
+ V ++SL+ +H
Sbjct: 680 NMKKVDAWSSLLGACKIH 697
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/440 (43%), Positives = 273/440 (62%), Gaps = 1/440 (0%)
Query: 50 VVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
+V ST +++ Y + G ++ A VF R+ K+ + WTAM+ GL +NG AL LF +MQ
Sbjct: 382 LVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQE 441
Query: 110 DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDK 169
+ V N VT+V ++ C+ LG+L GR +H++ +H + ++ ALI+MY++CG I
Sbjct: 442 EKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHS 501
Query: 170 ALQVFE-EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A ++F E +DV NS+I G MHG A+ ++ MI + ++P + TFV +L ACS
Sbjct: 502 AEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACS 561
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLV+ G +F SM RD+ + PQ +HY C+VDL SR GR EEA + + M P +L
Sbjct: 562 HSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVL 621
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+LLS C+ H +G QIA RL+ +SG YV+LSN YA + KW+ IR M+
Sbjct: 622 EALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLSNIYAEARKWESVNYIRGLMRMQ 681
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
G++K PG S IEV N+++ F D HP IY+ ++ L+ V+ EGY P T VL D+
Sbjct: 682 GMKKIPGYSLIEVGNKVYTFFASDDSHPSWADIYQLLENLRLEVEAEGYIPDTSCVLRDV 741
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
+ K L HSERLAI +GL+ST + I++ KNLRVC DCH++ K I+ I +R+IIV
Sbjct: 742 NEPMKVKLLWGHSERLAIAFGLLSTPCGSLIKITKNLRVCVDCHNVTKYISKIVQREIIV 801
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD NRFHHF NG CSC D+W
Sbjct: 802 RDANRFHHFVNGKCSCNDFW 821
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 190/398 (47%), Gaps = 23/398 (5%)
Query: 13 GLRSNRSTRLKLVELYGKCGEFKDAM---QLFDEMPECNDVVASTVMINCYVEHGLVENA 69
GLR + T L++ G+ G K M + NDV T +++ Y G +A
Sbjct: 241 GLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSA 300
Query: 70 FEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQL 129
VF + + + W AMI G V+NG + + LFR + + + T+V ++ CSQ
Sbjct: 301 ALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQT 360
Query: 130 GALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLI 189
LE GR +HS + + ++ + ++ A+++MYS+CG I +A VF M +++V T+ +++
Sbjct: 361 SDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAML 420
Query: 190 AGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR-DYG 248
GL+ +G + +A+++F +M + + VT V +++ C+H G + G + R Y
Sbjct: 421 VGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYA 480
Query: 249 IEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIA 308
+ I ++D+ ++ G+ A N D I+ S++ +HG + +
Sbjct: 481 FDAVIT--SALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVY 538
Query: 309 KRLLDCR-SADSGTYVLLSNAYASSGKWKEAVQIRAKM-KEAGVQKEPGCSSIEVNNEIH 366
R+++ R + T+V L A + SG +E + M ++ V+ + H
Sbjct: 539 SRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQ----------HKH 588
Query: 367 EFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVV 404
L D+ +++E ++VK + PST+V+
Sbjct: 589 YACLVDLHSRA-----GRLEEADELVKQMPFQPSTDVL 621
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 128/271 (47%), Gaps = 3/271 (1%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+I Y + G + +A VF + + +T AMI G +RN + LFR M ++ N
Sbjct: 85 LIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEIN 144
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
T + L AC+ L E+G I + L+ VG +++N + G + A +VF+
Sbjct: 145 SYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFD 204
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
M E+DV +NS+I G G E+++MF EMI G+RP+ VT +L AC GL +
Sbjct: 205 GMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKV 264
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G S G+ + +VD+ S +G A +M + I +++S
Sbjct: 265 GM-CAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSM-CSRSLISWNAMISGY 322
Query: 296 KIHGKLQLGEQIAKRLLDCRSA-DSGTYVLL 325
+G + + +RL+ S DSGT V L
Sbjct: 323 VQNGMIPESYALFRRLVQSGSGFDSGTLVSL 353
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 118/271 (43%), Gaps = 33/271 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G EI ++ G + +V K G DA ++FD MPE DVV +I YV
Sbjct: 164 GMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPE-KDVVCWNSIIGGYV 222
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ GL W ++ +F EM +RP+ VT+
Sbjct: 223 QKGLF-----------------W--------------ESIQMFLEMIGGGLRPSPVTMAN 251
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L AC Q G ++G HSY+ + + V +L++MYS GD A VF+ M R
Sbjct: 252 LLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRS 311
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++N++I+G +G E+ +FR ++ G T V ++ CS ++ G I
Sbjct: 312 LISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENG-RILH 370
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
S +E + IVD+ S+ G ++A
Sbjct: 371 SCIIRKELESHLVLSTAIVDMYSKCGAIKQA 401
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 94/212 (44%), Gaps = 33/212 (15%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR +H ++ G + L+++Y KCG+ A +LF+ DV+ MI Y
Sbjct: 466 KGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGY 525
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG A V+SR M + ++PN+ T V
Sbjct: 526 GMHGHGRYALGVYSR-------------------------------MIEERLKPNQTTFV 554
Query: 121 CVLSACSQLGALELGRWI-HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+L+ACS G +E G+ + HS H + H L++++SR G +++A ++ ++M
Sbjct: 555 SLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPF 614
Query: 180 RDVT-TYNSLIAGLAMHGRSIEAVEMFREMIN 210
+ T +L++G H + +++ +I+
Sbjct: 615 QPSTDVLEALLSGCRTHKNTNMGIQIADRLIS 646
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 1/142 (0%)
Query: 138 IHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR 197
IH+ + K+ + + LI +YS G + A VF++ + N++IAG + +
Sbjct: 66 IHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRNQQ 125
Query: 198 SIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYG 257
+E +FR M + I T + L AC+ ++G EI ++ R G +
Sbjct: 126 HMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRR-GFHLHLYVGS 184
Query: 258 CIVDLLSRVGRPEEAYDFITNM 279
+V+ L + G +A M
Sbjct: 185 SMVNFLVKRGYLADAQKVFDGM 206
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/489 (40%), Positives = 292/489 (59%), Gaps = 36/489 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++HGQ +KLGL + LV +Y K G + A + FD + E
Sbjct: 385 GEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFE--------------- 429
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K+ V T + D V++ + DL RE++ + T
Sbjct: 430 -----------------KNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYAS 472
Query: 122 VLSACSQLGALELGRWIHSYMGK--HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+LS + +G + G IH+ + K R DL+ V ALI+MYS+CG+ + ALQVF +M++
Sbjct: 473 LLSGAACIGTIGKGEQIHAMVVKIGFRTDLS--VNNALISMYSKCGNKEAALQVFNDMED 530
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+V T+ S+I G A HG + +A+E+F M+ G++P VT++ VL+ACSH GL+D ++
Sbjct: 531 CNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKH 590
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F SM ++GI P++EHY C+VDLL R G EA +FI +M D ++ + L +C++H
Sbjct: 591 FTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHR 650
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+LGE AK +L+ D TY+LLSN YA+ G+W++ IR MK+ + KE G S I
Sbjct: 651 NTKLGEHAAKMILEREPHDPATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWI 710
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
EV N++H+F +GD HP+ +QIY+K+ EL +K GY P+T+ VLHD+ED +KE L
Sbjct: 711 EVENQVHKFHVGDTLHPKAQQIYEKLDELALKIKNVGYVPNTDFVLHDVEDEQKEQYLFQ 770
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LA+ + LIST IRV KNLRVC DCH+ IK I+ ++ R+I+VRD NRFHH ++
Sbjct: 771 HSEKLAVAFALISTPNPKPIRVFKNLRVCGDCHTAIKYISMVSGREIVVRDANRFHHMKD 830
Query: 480 GTCSCGDYW 488
GTCSC DYW
Sbjct: 831 GTCSCNDYW 839
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 155/308 (50%), Gaps = 18/308 (5%)
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ-RDNVRPNEVTIVCVLS 124
+E+A +VF +++ K+ V WT MI L + G A+DLF EM P+ T+ ++S
Sbjct: 211 LESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLIS 270
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
C+++ L LG+ +HS++ + + L+ VG +L++MY++CG + +A +VF+ M+E +V +
Sbjct: 271 VCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMS 330
Query: 185 YNSLIAGLAMHGRSI--EAVEMFREMINQ-GIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ +L+ G G EA+ MF M+ Q G+ P TF GVL AC+ D G E
Sbjct: 331 WTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFG-EQVH 389
Query: 242 SMTRDYGIEPQIEHYG-CIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACKI 297
T G+ I+ G +V + ++ GR E A +D + + + ++ + + +
Sbjct: 390 GQTIKLGLSA-IDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNL 448
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
+ + L ++ S TY L + A G + QI A + + G + +
Sbjct: 449 NSEQDLDREVEYV---GSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTD---- 501
Query: 358 SIEVNNEI 365
+ VNN +
Sbjct: 502 -LSVNNAL 508
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 126/241 (52%), Gaps = 11/241 (4%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVK--VKDTVCWTAMIDGLVRNGEMARALDLFRE 106
D + +I Y + AF +F ++ +D V ++++I N +A+++F +
Sbjct: 86 DTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQ 145
Query: 107 MQ-RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHI-VGGALINMYSR- 163
+ +D V PNE V+ AC + G + G + ++ K +H+ VG LI+M+ +
Sbjct: 146 LLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKG 205
Query: 164 --CGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM-INQGIRPTKVTF 220
D++ A +VF++M+E++V T+ +I LA +G + EA+++F EM ++ G P + T
Sbjct: 206 CSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTL 265
Query: 221 VGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGC-IVDLLSRVGRPEEAYDFITNM 279
G+++ C+ + LG E+ + R G+ + GC +VD+ ++ G +EA M
Sbjct: 266 TGLISVCAEIQFLSLGKELHSWVIRS-GLVLDL-CVGCSLVDMYAKCGLVQEARKVFDGM 323
Query: 280 K 280
+
Sbjct: 324 R 324
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 37/212 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G +IH V+K+G R++ S L+ +Y KCG + A+Q+F++M +CN V+ T +IN +
Sbjct: 485 KGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCN-VITWTSIINGF 543
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+HG ++AL+LF M V+PN+VT +
Sbjct: 544 AKHGFA-------------------------------SKALELFYNMLETGVKPNDVTYI 572
Query: 121 CVLSACSQLGALELGRWIH--SYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
VLSACS +G ++ W H S H I ++++ R G + +A++ M
Sbjct: 573 AVLSACSHVGLIDEA-WKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMP 631
Query: 179 -ERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
+ D + + + +H R+ + E +MI
Sbjct: 632 FDADALVWRTFLGSCRVH-RNTKLGEHAAKMI 662
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 120/278 (43%), Gaps = 46/278 (16%)
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
+T +L C + LG+ +H + + L+ ++ +LI +YS+ D A +F+
Sbjct: 53 ITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQS 112
Query: 177 MK--ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ-GIRPTKVTFVGVLNACSHGGLV 233
M+ +RDV +Y+S+I+ A + ++AVEMF +++ Q G+ P + F V+ AC GG
Sbjct: 113 MENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFF 172
Query: 234 DLGFEIFQSMTR----------------------------------DYGIEPQIEHYGCI 259
G +F + + D E + + +
Sbjct: 173 KTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLM 232
Query: 260 VDLLSRVGRPEEAYDFITNMKIA----PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR 315
+ L++ G +EA D M ++ PD L L+S C L LG+++ ++ R
Sbjct: 233 ITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVI--R 290
Query: 316 SA---DSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
S D L + YA G +EA ++ M+E V
Sbjct: 291 SGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNV 328
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/490 (39%), Positives = 291/490 (59%), Gaps = 4/490 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG + Q+L G R +R L + E D ++ E D + +
Sbjct: 94 EGFSLFRQMLSEGSRPSRGAILNAMACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMF 153
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G VE A ++F + KD V W I+ V+ AL L ++M + P+ +T++
Sbjct: 154 ARCGRVEVARKLFDGIMSKDLVTWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLL 213
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHI--VGGALINMYSRCGDIDKALQVFEEMK 178
V+ ACS L + +L +H + N + V ALI++Y +CG + A +VF+ M+
Sbjct: 214 GVIRACSTLASFQLAHIVHGIITTGFF-YNQLLAVETALIDLYVKCGSLTYARKVFDGMQ 272
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
ER++ T++++I+G MHG EA+ +F +M ++P +TFV +L+ACSH GLV G+E
Sbjct: 273 ERNIITWSAMISGYGMHGWGREALNLFDQM-KASVKPDHITFVSILSACSHSGLVAEGWE 331
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
F SM RD+G+ P+ EHY C+VD+L R G+ +EA DFI M + P+ + G+LL AC+IH
Sbjct: 332 CFNSMARDFGVTPRPEHYACMVDILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIH 391
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
+ L E +A+ L D ++G YV+L N Y +GK KEA IR MK GV+K G S
Sbjct: 392 LNVDLAEMVARALFDLDPHNAGRYVILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSV 451
Query: 359 IEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALA 418
IE+ N+++ F+ GD HPQ + IY +++ L ++ EGY+P VLHD+++ KE L
Sbjct: 452 IEIKNKLYAFVAGDRSHPQTDLIYSELERLMDRIRQEGYTPDINFVLHDVDEETKESMLY 511
Query: 419 IHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFE 478
+HSE+LAI +GL++ P + IR+ KNLRVC DCH+ K I+ +T R+I+VRD +RFHHF+
Sbjct: 512 LHSEKLAIVFGLLNLGPGSVIRIRKNLRVCGDCHTATKFISKVTGREIVVRDAHRFHHFK 571
Query: 479 NGTCSCGDYW 488
NG CSC DYW
Sbjct: 572 NGACSCRDYW 581
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 96/229 (41%), Gaps = 32/229 (13%)
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M R ++P+ T ++ ACS L E G IH + K + +LI MY +C
Sbjct: 1 MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+ + QVF+EM +++ +++++I R E +FR+M+++G RP++ + + A
Sbjct: 61 YELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAM-A 119
Query: 227 C--SHGG-------LVDLGFEIFQSMTR-------------------DYGIEPQIEHYGC 258
C SH +V+ G + QS+ D + + +
Sbjct: 120 CVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWAT 179
Query: 259 IVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLG 304
++ + P EA + M I PD I L ++ AC QL
Sbjct: 180 TIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLA 228
>gi|297817744|ref|XP_002876755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322593|gb|EFH53014.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 597
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/438 (44%), Positives = 291/438 (66%), Gaps = 5/438 (1%)
Query: 46 ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
EC +VA T ++ Y++ G + +A +F ++VKD V W A I V+ G A AL+ F
Sbjct: 141 ECLGIVA-TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFIAVCVQTGNSAIALEYFN 199
Query: 106 EMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG 165
+M D V+ + T+V +LSAC QLG+L++G I+ K I+ N IV A ++M+ +CG
Sbjct: 200 KMCADAVQFDSFTVVSMLSACGQLGSLDIGEEIYDRARKEEIECNIIVENARLDMHLKCG 259
Query: 166 DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
+ A +F++MK+R+V +++++I G AM+G S EA+ +F M N+G+RP VTF+GVL+
Sbjct: 260 STEAARVLFDDMKQRNVVSWSTMIVGYAMNGDSGEALALFTMMQNEGLRPNYVTFLGVLS 319
Query: 226 ACSHGGLVDLGFEIFQSMTR--DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAP 283
ACSH GLV+ G F M R D +EP+ EHY C+VDLL R G EEAY+FI M++ P
Sbjct: 320 ACSHAGLVNEGKRYFSLMVRLNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMRVEP 379
Query: 284 DHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTY-VLLSNAYASSGKWKEAVQIR 342
D + G+LL AC +H + LG+++A L++ + D G+Y VLLSN YA++GKW ++R
Sbjct: 380 DTGIWGALLGACAVHRDMILGQKVADVLVET-APDIGSYHVLLSNIYAAAGKWDCVDKVR 438
Query: 343 AKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTE 402
+KM++ G +K SS+E + +IH F GDI HPQ + IY+K+ E+ + ++ GY P T
Sbjct: 439 SKMRKLGTKKVAAYSSVEFDGKIHFFNRGDISHPQSKAIYEKLDEILKKIRNMGYVPDTG 498
Query: 403 VVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANIT 462
V HD+E EKE +L+ HSE+LAI +GLI+ + IRV+KNLR C+DCH K ++ +T
Sbjct: 499 SVFHDVEMEEKESSLSHHSEKLAIAFGLINGRAGHPIRVMKNLRTCDDCHVFSKFVSRLT 558
Query: 463 KRKIIVRDRNRFHHFENG 480
R+II+RD+NRFHHF NG
Sbjct: 559 SREIIMRDKNRFHHFRNG 576
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 124/278 (44%), Gaps = 33/278 (11%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
++IH V++ G S +L+E G+ A Q+FDEMP+
Sbjct: 28 KKIHAVVIRTGFSEKNSLLTQLLENLVLVGDMCYARQVFDEMPK---------------- 71
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
W + G VRN ++ L+++M+ VRP+E T V
Sbjct: 72 ----------------PRIFLWNTLFKGYVRNQLPFESVLLYKKMRDLGVRPDEFTYPFV 115
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
+ A SQLG L G +H+++ K+ + IV L+ MY + G++ A +FE M+ +D+
Sbjct: 116 VKAISQLGVLPCGVSLHAHVLKNGFECLGIVATELVMMYMKFGELSSAEFLFESMQVKDL 175
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
+N+ IA G S A+E F +M ++ T V +L+AC G +D+G EI+
Sbjct: 176 VAWNAFIAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLDIGEEIYDR 235
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
R IE I +D+ + G E A +MK
Sbjct: 236 -ARKEEIECNIIVENARLDMHLKCGSTEAARVLFDDMK 272
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 36/198 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G EI+ + K + N ++++ KCG + A LFD+M +
Sbjct: 229 GEEIYDRARKEEIECNIIVENARLDMHLKCGSTEAARVLFDDMKQ--------------- 273
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ V W+ MI G NG+ AL LF MQ + +RPN VT +
Sbjct: 274 -----------------RNVVSWSTMIVGYAMNGDSGEALALFTMMQNEGLRPNYVTFLG 316
Query: 122 VLSACSQLGALELGRWIHSYM---GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
VLSACS G + G+ S M ++ ++++ R G +++A + ++M+
Sbjct: 317 VLSACSHAGLVNEGKRYFSLMVRLNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMR 376
Query: 179 -ERDVTTYNSLIAGLAMH 195
E D + +L+ A+H
Sbjct: 377 VEPDTGIWGALLGACAVH 394
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 75/180 (41%), Gaps = 35/180 (19%)
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL 224
GD+ A QVF+EM + + +N+L G + E+V ++++M + G+RP + T+ V+
Sbjct: 57 GDMCYARQVFDEMPKPRIFLWNTLFKGYVRNQLPFESVLLYKKMRDLGVRPDEFTYPFVV 116
Query: 225 NACSHGGLVDLGFEIFQSMTRDYGIE-------------------------------PQI 253
A S G++ G + + ++ G E +
Sbjct: 117 KAISQLGVLPCGVSLHAHVLKN-GFECLGIVATELVMMYMKFGELSSAEFLFESMQVKDL 175
Query: 254 EHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKR 310
+ + + + G A ++ M + D + S+LSAC G L +GE+I R
Sbjct: 176 VAWNAFIAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLDIGEEIYDR 235
>gi|357487543|ref|XP_003614059.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
gi|355515394|gb|AES97017.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
Length = 565
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/498 (40%), Positives = 297/498 (59%), Gaps = 45/498 (9%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+++H VLKLG + L+ Y CG
Sbjct: 103 EGKQVHAHVLKLGFELDTYICNSLIHFYASCG---------------------------- 134
Query: 61 VEHGLVENAFEVFSRV-KVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
+E A +VF R+ + ++ V W MID + G+ L +F EM + P+ T+
Sbjct: 135 ----YLETARKVFDRMCEWRNVVSWNVMIDSYAKVGDYDIVLIMFCEMMKV-YEPDCYTM 189
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHI----VGGALINMYSRCGDIDKALQVFE 175
V+ AC LG+L LG W+H+++ K + D N + V L++MY +CG ++ A QVFE
Sbjct: 190 QSVIRACGGLGSLSLGMWVHAFVLK-KCDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVFE 248
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN-QGIRPTKVTFVGVLNACSHGGLVD 234
M RDV+++NS+I G A+HG++ A++ F M+ + I P +TFVGVL+AC+H G+VD
Sbjct: 249 GMSYRDVSSWNSIILGFAVHGKAKAALDYFVRMVKVEKIVPNSITFVGVLSACNHSGMVD 308
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
G F+ MT++Y +EP + HYGC+VDL +R G +EA + ++ M I PD ++ SLL A
Sbjct: 309 EGLMYFEMMTKEYNVEPSLVHYGCLVDLYARAGHIQEALNVVSEMPIKPDAVIWRSLLDA 368
Query: 295 C-KIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
C K H ++L E++AK++ + S G YVLLS YAS+ +W + +R M + GV K
Sbjct: 369 CYKQHASVELSEEMAKQIFESNGSVCGGAYVLLSKVYASASRWNDVGLLRKLMNDKGVSK 428
Query: 353 EPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSP--STEVVLHDIED 410
+PGCS IE+N HEF GD HPQ + IYK M E+++ ++ GY P S ++ +I +
Sbjct: 429 KPGCSLIEINGAAHEFFAGDTNHPQSKDIYKFMNEIQEKLESVGYLPDYSGAPLIDEINE 488
Query: 411 WEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRD 470
K+ + +HSERLAI +GL+++KP IRV KNLRVCNDCH + KLI+ I +IIVRD
Sbjct: 489 -GKQNTMRLHSERLAIAFGLLNSKPSMPIRVFKNLRVCNDCHKVTKLISRIYNVEIIVRD 547
Query: 471 RNRFHHFENGTCSCGDYW 488
R RFHHF++G+CSC DYW
Sbjct: 548 RVRFHHFKDGSCSCMDYW 565
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 139/319 (43%), Gaps = 45/319 (14%)
Query: 71 EVFSRVKVKDTVCWTAMIDGLVRNG-EMARALDLFREM---QRDNVRPNEVTIVCVLSAC 126
++ + ++ W +I ++ +A+ L++ + Q + + P++ T VL AC
Sbjct: 36 QILRTIHTPNSFTWNILIQSYSKSTLHKQKAILLYKAIITEQENELFPDKHTYPFVLKAC 95
Query: 127 SQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE-RDVTTY 185
+ L +L G+ +H+++ K +L+ + +LI+ Y+ CG ++ A +VF+ M E R+V ++
Sbjct: 96 AYLFSLFEGKQVHAHVLKLGFELDTYICNSLIHFYASCGYLETARKVFDRMCEWRNVVSW 155
Query: 186 NSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR 245
N +I A G + MF EM+ + P T V+ AC G + LG + + +
Sbjct: 156 NVMIDSYAKVGDYDIVLIMFCEMM-KVYEPDCYTMQSVIRACGGLGSLSLGMWVHAFVLK 214
Query: 246 --DYGIEPQIEHYGCIVDLLSRV-------------------------------GRPEEA 272
D + + C+VD+ + G+ + A
Sbjct: 215 KCDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVFEGMSYRDVSSWNSIILGFAVHGKAKAA 274
Query: 273 YDFITNM----KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT--YVLLS 326
D+ M KI P+ I +LSAC G + G + + + + Y L
Sbjct: 275 LDYFVRMVKVEKIVPNSITFVGVLSACNHSGMVDEGLMYFEMMTKEYNVEPSLVHYGCLV 334
Query: 327 NAYASSGKWKEAVQIRAKM 345
+ YA +G +EA+ + ++M
Sbjct: 335 DLYARAGHIQEALNVVSEM 353
>gi|296085287|emb|CBI29019.3| unnamed protein product [Vitis vinifera]
Length = 408
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/446 (43%), Positives = 274/446 (61%), Gaps = 39/446 (8%)
Query: 44 MPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDL 103
MPE N +V+ M++ +V+ G VE AF +FS + +D V W +M+ + G+ AL L
Sbjct: 1 MPERN-LVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALAL 59
Query: 104 FREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSR 163
F +MQ + +N IVG AL++MY++
Sbjct: 60 FDQMQA-------------------------------------VGVNSIVGTALVDMYAK 82
Query: 164 CGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGV 223
CG I A QVF M+ +DV +N++IAG+A+ G EA ++F+EM G+ P +TFV +
Sbjct: 83 CGKISLATQVFNAMESKDVLAWNTIIAGMAILGHVKEAQQLFKEMKEAGVEPNDITFVAM 142
Query: 224 LNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAP 283
L+ACSH G+VD G ++ M+ YGIEP++EHYGC++DLL+R G EEA + I M + P
Sbjct: 143 LSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTMPMEP 202
Query: 284 DHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRA 343
+ LG+LL C+IHG +LGE + KRL++ + SG Y+LLSN YA++ KW +A ++R
Sbjct: 203 NPCALGALLEGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRN 262
Query: 344 KMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLE-GYSPSTE 402
MK G+ K PG S IE+ +H F+ GD HP+ +IY+K+ E+ +K GYS T
Sbjct: 263 LMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTG 322
Query: 403 VVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANIT 462
L D+E+ +KE ALA+HSE+LAI YGL+ IR+VKNLRVC DCH + KLI+ +
Sbjct: 323 NGLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVTKLISKVY 382
Query: 463 KRKIIVRDRNRFHHFENGTCSCGDYW 488
+IIVRDRNRFHHFE+G CSC D+W
Sbjct: 383 GGEIIVRDRNRFHHFEDGECSCLDFW 408
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 105/191 (54%), Gaps = 5/191 (2%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECN-DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTV 82
++ Y +CG+ +A+ LFD+M + + T +++ Y + G + A +VF+ ++ KD +
Sbjct: 43 MLACYAQCGKPNEALALFDQMQAVGVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVL 102
Query: 83 CWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM 142
W +I G+ G + A LF+EM+ V PN++T V +LSACS G ++ G+ + M
Sbjct: 103 AWNTIIAGMAILGHVKEAQQLFKEMKEAGVEPNDITFVAMLSACSHAGMVDEGQKLLDCM 162
Query: 143 -GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-ERDVTTYNSLIAGLAMHGRSIE 200
+ I+ G +I++ +R G +++A+++ M E + +L+ G +HG + E
Sbjct: 163 SSSYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTMPMEPNPCALGALLEGCRIHG-NFE 221
Query: 201 AVEMF-REMIN 210
EM + +IN
Sbjct: 222 LGEMVGKRLIN 232
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/441 (43%), Positives = 268/441 (60%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
DV S ++ CY + G +E + E+F + ++ V W +I V+ G+ RAL LF M
Sbjct: 281 TDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNM 340
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
R V+ EVT +L AC+ L ALELG +H K + VG ALI+MY++CG I
Sbjct: 341 LRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSI 400
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A +F+ + RD ++N++I G +MHG +EA++MF M +P ++TFVGVL+AC
Sbjct: 401 KDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSAC 460
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
S+ G +D G + F SM +DYGIEP +EHY C+V L+ R G ++A FI ++ P ++
Sbjct: 461 SNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMI 520
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+LL AC IH ++LG A+R+L+ D ++VLLSN YA + +W +R MK
Sbjct: 521 WRALLGACVIHNDVELGRISAQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKR 580
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
GV+KEPG S IE +H F + D H + I ++ L + GYSP VL D
Sbjct: 581 KGVKKEPGLSWIENQGNVHCFTVADTSHADLKLINGMLEFLNMKTRKAGYSPQLNAVLLD 640
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
+ED EKE L +HSERLA+ +GL+ IR++KNLR+C DCHS+IKLI+ I R II
Sbjct: 641 VEDDEKERLLWLHSERLALAFGLVRMPAGCPIRIIKNLRICVDCHSVIKLISKIVGRDII 700
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
VRD NRFHHFENG+CSC DYW
Sbjct: 701 VRDMNRFHHFENGSCSCADYW 721
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 173/352 (49%), Gaps = 45/352 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H VLK + + L+ELY +CG+ DA + F +MP+ NDV+
Sbjct: 166 GKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPK-NDVIP--------- 215
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
W+ MI ++G+ +AL++F +M+R V PN+ T
Sbjct: 216 ----------------------WSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSS 253
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL A + + +L+L + IH + K + + V AL+ Y++CG I++++++FE + +R+
Sbjct: 254 VLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRN 313
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
++N++I G A+ +F M+ ++ T+VT+ +L AC+ ++LG ++
Sbjct: 314 DVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHC 373
Query: 242 SMTRD-YGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ YG + + + ++D+ ++ G ++A F+ +M D + +++ +HG
Sbjct: 374 LTAKTIYGQDVAVGN--ALIDMYAKCGSIKDA-RFMFDMLDLRDKVSWNAIICGYSMHG- 429
Query: 301 LQLGEQIAKRL-----LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
LG + K C+ D T+V + +A +++G+ E Q MK+
Sbjct: 430 --LGVEAIKMFNLMKETKCK-PDELTFVGVLSACSNTGRLDEGKQYFTSMKQ 478
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 157/381 (41%), Gaps = 86/381 (22%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +HG VLK+G SN T +I+ Y
Sbjct: 65 GRIVHGCVLKVGYGSN--------------------------------TFIGTALIDAYS 92
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G V A EVF + KD V WT MI N + AL+ F +M+ +PN T
Sbjct: 93 VSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAG 152
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL AC L + G+ +H + K + + VG L+ +Y+RCGD D A + F +M + D
Sbjct: 153 VLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKND 212
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HG 230
V ++ +I+ A G+S +A+E+F +M + P + TF VL A + HG
Sbjct: 213 VIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHG 272
Query: 231 ------------------------GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRV 266
G ++ E+F++++ + + I+ ++
Sbjct: 273 HALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVS-----WNTIIVSYVQL 327
Query: 267 GRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADS--GT 321
G E A +NM ++ + S+L AC L+LG Q+ C +A + G
Sbjct: 328 GDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQV-----HCLTAKTIYGQ 382
Query: 322 YVLLSNA----YASSGKWKEA 338
V + NA YA G K+A
Sbjct: 383 DVAVGNALIDMYAKCGSIKDA 403
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 129/307 (42%), Gaps = 40/307 (13%)
Query: 72 VFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGA 131
VF + ++TV + +I G ++ + A +LF + + N VL +
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 132 LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAG 191
ELGR +H + K N +G ALI+ YS G + A +VF+E+ +D+ ++ +IA
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121
Query: 192 LAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT------- 244
A + EA+E F +M G +P TF GVL AC D G + S+
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERD 181
Query: 245 ---------------------RDYGIEPQ--IEHYGCIVDLLSRVGRPEEAYDFITNMK- 280
R +G P+ + + ++ ++ G+ E+A + M+
Sbjct: 182 LYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRR 241
Query: 281 --IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNA----YASSGK 334
+ P+ S+L A L L + I L A T V +SNA YA G
Sbjct: 242 AFVIPNQFTFSSVLQASADIESLDLSKTIHGHAL---KAGLSTDVFVSNALMACYAKCGC 298
Query: 335 WKEAVQI 341
++++++
Sbjct: 299 IEQSMEL 305
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/487 (39%), Positives = 290/487 (59%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+E+HG VL+ GL + + L+ LY CGE A LFD M E
Sbjct: 356 GKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEE--------------- 400
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K +V W AMI G +NG AL LFR++ D +P+++ +V
Sbjct: 401 -----------------KSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVS 443
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL ACSQ AL LG+ H Y K + + V + I+MY++ G I ++ VF+ +K +D
Sbjct: 444 VLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKD 503
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++N++IA +HG E++E+F M G P TF+G+L CSH GLV+ G + F
Sbjct: 504 LASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFN 563
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M +GIEP++EHY C++D+L R GR ++A + M PD + SLLS C+ G+L
Sbjct: 564 EMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGEL 623
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++G+ +A++LL+ + YV LSN YA SG+W + ++R +K+ G+QK+ GCS IE+
Sbjct: 624 EIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIEL 683
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
++H F+ GD PQ +++ ++L++ + GY P+T VLHD+++ +K L HS
Sbjct: 684 GGKVHSFVAGDNLLPQSKEMSMTWRKLEKKMCKIGYKPNTSAVLHDVDEEKKIEKLRGHS 743
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAIC+GL++T TT+R+ KNLR+C DCH+ K ++ +T R+II+RD RFHHF++G
Sbjct: 744 EKLAICFGLLNTTKGTTLRIFKNLRICVDCHNASKFMSEVTGREIIIRDNKRFHHFKDGL 803
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 804 CSCGDYW 810
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 187/420 (44%), Gaps = 81/420 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDA------------------------ 37
G IHG +KLGL + LV++Y KCG +A
Sbjct: 153 GIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCT 212
Query: 38 -------MQLFDEMP-----ECNDVVASTVMINCY---------------VEHG-----L 65
LF EM E N+V ++ C + HG L
Sbjct: 213 KGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDEL 272
Query: 66 VENAF--------------EVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN 111
V N F VF ++ K W A+I G +NG+ +AL+L+ +M
Sbjct: 273 VANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSG 332
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
+ P+ TI +L A + L +L G+ +H ++ +H ++++ +G +L+++Y CG+ A
Sbjct: 333 LVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSAR 392
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
+F+ M+E+ ++N++I+G + +G +A+ +FR++++ G +P+ + V VL ACS
Sbjct: 393 LLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQS 452
Query: 232 LVDLGFEIFQSMTRDYGIEPQIEH---YGC-IVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
+ LG E T Y ++ + C +D+ ++ G +E+ +K D
Sbjct: 453 ALRLGKE-----THCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLK-NKDLAS 506
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDC-RSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
++++A +HG + ++ +R+ + D T++ + + +G +E ++ +M+
Sbjct: 507 WNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQ 566
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 136/295 (46%), Gaps = 36/295 (12%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV +I Y + G V+ A +VF + V++ V W ++I G NG D+ EM
Sbjct: 65 DVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMM 124
Query: 109 --RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
+ + P+ T+V VL C++ +++G IH K + + V +L++MYS+CG
Sbjct: 125 AGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGY 184
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM-INQGIRPTKVTFVGVLN 225
+ +A +F++ ++ ++N++I GL G EA +FREM + + I +VT + +L
Sbjct: 185 LTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILP 244
Query: 226 AC-----------SHGGLVDLGFEIFQSMTRD------------------YGIEPQ-IEH 255
AC HG + GF+ + + Y +E + +
Sbjct: 245 ACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNS 304
Query: 256 YGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQI 307
+ ++ ++ G P +A + M + PD +GSLL A L+ G+++
Sbjct: 305 WNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEV 359
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 97/185 (52%), Gaps = 8/185 (4%)
Query: 93 RNGEMARALDLFREMQRDN-VRPNEVTIVCVLSACSQLGALE--LGRWIHSYMGKHRIDL 149
RN + A+D+F ++ D + T CV+ AC+ G+L+ LG IH + K + L
Sbjct: 7 RNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACT--GSLDRGLGEVIHGMVIKMGLLL 64
Query: 150 NHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
+ VG ALI MY + G +D A++VF M R++ ++NS+I+G + +G S + +M EM+
Sbjct: 65 DVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMM 124
Query: 210 --NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
+G+ P T V VL C+ V +G I + G+ + +VD+ S+ G
Sbjct: 125 AGEEGLLPDIATLVTVLPVCAREVDVQMGIRI-HGLAVKLGLSEDVRVNNSLVDMYSKCG 183
Query: 268 RPEEA 272
EA
Sbjct: 184 YLTEA 188
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/489 (36%), Positives = 305/489 (62%), Gaps = 23/489 (4%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H ++ G+ + L++LY KCG+ +A++ F+++P C + M++ +
Sbjct: 387 GRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLP-CKSAASWNSMLDGFC 445
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G V+ A + F+++ KD V W M++ V++ + ++F +MQ NV+P++ T++
Sbjct: 446 RSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLIS 505
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+LS+C+++GAL G W++ Y+ K+ I ++ ++G ALI+MY +CG ++ A ++F ++ E++
Sbjct: 506 LLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKN 565
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V + +++A AM G+++EA++++ EM +G++P VTF+ +L ACSHGGLVD G++ F
Sbjct: 566 VFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFN 625
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+ Y I P I HYGC+VDLL RVG EE FI M I PD + SL+ AC+ H +
Sbjct: 626 KLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNV 685
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+L EQ K+L++ ++G +VLLSN YA +G+W + ++R K+ E GV K+PG + IE
Sbjct: 686 ELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVPKQPGFTMIEQ 745
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQ--IVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
N +HEF+ ++ I +Q++++ +VK E +++
Sbjct: 746 NGVVHEFVASNL---VSADILCMLQDIERRLLVKQELSDTTSQ----------------- 785
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSERLA+ +GLI+ + + IRVV ++R+C DCHS++KLI+ R+I++RD RFH F +
Sbjct: 786 HSERLAVAFGLINNQENSPIRVVNSVRMCRDCHSVMKLISQAYDREIVIRDNYRFHRFTD 845
Query: 480 GTCSCGDYW 488
G CSC DYW
Sbjct: 846 GHCSCKDYW 854
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 178/370 (48%), Gaps = 76/370 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN-DVVASTVMINCY 60
G+ +H ++ L S LV++Y KCG+ +A L E DVV T +++ Y
Sbjct: 253 GKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGY 312
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V+ ++ A ++F ++ + V WT M+ G V+ G +L+LF++M+ +NV P+EV +V
Sbjct: 313 VKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALV 372
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM--- 177
VLSAC L +LGR +H+++ + + ++ +G AL+++Y++CG +D+AL+ FE++
Sbjct: 373 TVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCK 432
Query: 178 ----------------------------KERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
E+D+ ++N+++ H E+ E+F +M
Sbjct: 433 SAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQ 492
Query: 210 NQGIRPTKVTFVGVLNACS------HG-----------------------------GLVD 234
+ ++P K T + +L++C+ HG G V+
Sbjct: 493 SSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVE 552
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSL 291
+ +EIF + IE + + ++ + G+ EA D M+ + PDH+ +L
Sbjct: 553 MAYEIFTQI-----IEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIAL 607
Query: 292 LSACKIHGKL 301
L+AC HG L
Sbjct: 608 LAACS-HGGL 616
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 181/388 (46%), Gaps = 76/388 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G E+HG++LK G N+S L+ LY KCG+ K+ QLF++M DV++ MI+CYV
Sbjct: 152 GSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTH-RDVISWNTMISCYV 210
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G+ R ALDLF EM V P+E+T+V
Sbjct: 211 --------------------------LKGMYR-----EALDLFDEMLVSGVLPDEITMVS 239
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG---------------- 165
++S C++L LE+G+ +H Y+ +++ + + L++MYS+CG
Sbjct: 240 LVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESE 299
Query: 166 -----------------DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM 208
IDKA Q+F++M ER + ++ ++++G G E++E+F++M
Sbjct: 300 VDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQM 359
Query: 209 INQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGR 268
+ + P +V V VL+AC H DLG + + YG+ ++DL ++ G+
Sbjct: 360 RFENVIPDEVALVTVLSACVHLEDFDLGRSV-HAFIVTYGMLVDGFLGNALLDLYAKCGK 418
Query: 269 PEEA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLL 325
+EA ++ + A + ML + + +I ++ D ++ +
Sbjct: 419 LDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEK-------DIVSWNTM 471
Query: 326 SNAYASSGKWKEAVQIRAKMKEAGVQKE 353
NAY + E+ +I KM+ + V+ +
Sbjct: 472 VNAYVKHDLFNESFEIFCKMQSSNVKPD 499
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 143/283 (50%), Gaps = 5/283 (1%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A ++ S +++ W +++ ++ G L+ + M V + T ++ AC +
Sbjct: 86 AHQILSYSHEPESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCK 145
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
++LG +H + K N + L+ +YS+CG + + Q+FE+M RDV ++N++
Sbjct: 146 NFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTM 205
Query: 189 IAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYG 248
I+ + G EA+++F EM+ G+ P ++T V +++ C+ +++G + + D
Sbjct: 206 ISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIV-DNK 264
Query: 249 IEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAP-DHIMLGSLLSACKIHGKLQLGEQI 307
+ + C+VD+ S+ G+ +EA+ ++ + D ++ +L+S K+ Q+
Sbjct: 265 LWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQL 324
Query: 308 AKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
++ + RS S T ++ + Y G + E++++ +M+ V
Sbjct: 325 FDKMNE-RSLVSWTTMM--SGYVQGGYYCESLELFQQMRFENV 364
>gi|357496515|ref|XP_003618546.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493561|gb|AES74764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 637
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/498 (40%), Positives = 308/498 (61%), Gaps = 13/498 (2%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++H V+K G L+ +Y K G +A ++F+ + E VV+ + + V
Sbjct: 142 GSQMHVGVVKFGFVKFDKVCNALMNVYVKFGLVGEARKMFEGI-EVRSVVSWSCFLEGLV 200
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTIV 120
+ VE+ +F + ++ V WT MI G V NG A L +EM R + VT+
Sbjct: 201 KWESVESGRVLFDEMPERNEVAWTVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVTLC 260
Query: 121 CVLSACSQLGALELGRWIHSYMGKHR-IDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
VLSACSQ G + +GRW+H Y K +D +VG +L++MY++CG I+ AL VF M +
Sbjct: 261 SVLSACSQSGDVCVGRWVHCYAVKEMGLDFGVMVGTSLVDMYAKCGRINAALSVFRSMLK 320
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
R+V +N+++ GLAMHG AV+MF M+ + ++P VTF+ +L+ACSH GLV+ G++
Sbjct: 321 RNVVAWNAMLGGLAMHGMGKIAVDMFPSMVEE-VKPDGVTFMALLSACSHSGLVEKGWDY 379
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F + Y I+P+IEHY C+V LL R GR EEA + NM+I P+ ++LGSL+ +C HG
Sbjct: 380 FHDLEPVYRIKPEIEHYACMVGLLGRAGRLEEAEIMVKNMRIPPNEVVLGSLIGSCYAHG 439
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+LQLGE+I + LL+ ++ +++LSN YA SGK ++A +R +K+ G++K PG SSI
Sbjct: 440 RLQLGEKIMRDLLEMDPLNTEYHIVLSNMYALSGKVEKANSLRQVLKKRGIKKVPGMSSI 499
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEV-VLHDIEDW------- 411
V+ ++H+FI GD H + +IY K+ E+ ++ GY P+T VL +
Sbjct: 500 YVDGKLHQFIAGDKSHTRTSEIYMKLDEMICRLRSAGYVPNTSCQVLFGCSNRDDCSESL 559
Query: 412 -EKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRD 470
E E L HSE+LA+C+GL+ST + + + KNLR+C DCHS IK+ + + KR+I+VRD
Sbjct: 560 EEVEQVLFTHSEKLALCFGLMSTPSGSPLHIFKNLRICQDCHSAIKIASKVYKREIVVRD 619
Query: 471 RNRFHHFENGTCSCGDYW 488
R RFH F++G+CSC DYW
Sbjct: 620 RYRFHSFKHGSCSCSDYW 637
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 161/368 (43%), Gaps = 71/368 (19%)
Query: 2 GREIHGQVLKLGLRS--NRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINC 59
G+++H + GL S N R L+ LYG C A +LFDE+P+ +
Sbjct: 39 GQQLHATAIVTGLISSPNHFLRNALLHLYGSCSLPSHARKLFDEIPQSH----------- 87
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
KD+V +TA L+R+ +L LF +M++ ++ + V +
Sbjct: 88 -------------------KDSVDYTA----LIRHCPPFESLKLFIQMRQFDLPLDGVVM 124
Query: 120 VCVLSACSQLGA--LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE-- 175
VC L+AC++LG ++G +H + K V AL+N+Y + G + +A ++FE
Sbjct: 125 VCALNACARLGGGDTKVGSQMHVGVVKFGFVKFDKVCNALMNVYVKFGLVGEARKMFEGI 184
Query: 176 -----------------------------EMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
EM ER+ + +I G +G + EA + +
Sbjct: 185 EVRSVVSWSCFLEGLVKWESVESGRVLFDEMPERNEVAWTVMIVGYVGNGFTKEAFLLLK 244
Query: 207 EMI-NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSR 265
EM+ G R + VT VL+ACS G V +G + ++ G++ + +VD+ ++
Sbjct: 245 EMVFGCGFRLSFVTLCSVLSACSQSGDVCVGRWVHCYAVKEMGLDFGVMVGTSLVDMYAK 304
Query: 266 VGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLL 325
GR A +M + + + ++L +HG ++ + +++ D T++ L
Sbjct: 305 CGRINAALSVFRSM-LKRNVVAWNAMLGGLAMHGMGKIAVDMFPSMVEEVKPDGVTFMAL 363
Query: 326 SNAYASSG 333
+A + SG
Sbjct: 364 LSACSHSG 371
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 21/136 (15%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRI--DLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+L CS+ AL G+ +H+ + NH + AL+++Y C A ++F+E+ +
Sbjct: 26 LLRQCSRATALRPGQQLHATAIVTGLISSPNHFLRNALLHLYGSCSLPSHARKLFDEIPQ 85
Query: 180 --RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS--------- 228
+D Y +LI H E++++F +M + V V LNAC+
Sbjct: 86 SHKDSVDYTALIR----HCPPFESLKLFIQMRQFDLPLDGVVMVCALNACARLGGGDTKV 141
Query: 229 ----HGGLVDLGFEIF 240
H G+V GF F
Sbjct: 142 GSQMHVGVVKFGFVKF 157
>gi|115470713|ref|NP_001058955.1| Os07g0163900 [Oryza sativa Japonica Group]
gi|113610491|dbj|BAF20869.1| Os07g0163900 [Oryza sativa Japonica Group]
Length = 664
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/454 (41%), Positives = 272/454 (59%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H +K G + R LV YG G+ ++FDE+P DV+ ++ YV
Sbjct: 165 GSHVHALAVKAGAAGDLFVRNALVHFYGVSGDVGAMRRVFDELPRVRDVLTWNEVLAGYV 224
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G++ A EVF + V+D + W+ ++ G V+ E+ AL +FR M VRPN+ +V
Sbjct: 225 RAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGVRPNQAAVVT 284
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
LSA ++LG LE G+++H+ + + + + VG AL++MY++CG + A +VF+ M+ RD
Sbjct: 285 ALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKCGCVAVAREVFDGMRRRD 344
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +N++I GLA HG +AVE+F I++G+ PT VTFVGVLN CS GLV G F+
Sbjct: 345 VFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFK 404
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+ Y IEP++EHYGC+VDLL R G EA + I M IAPD ++ G++LS+CK HG +
Sbjct: 405 LIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPVLWGTILSSCKTHGLV 464
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
LG + +L++ SG YVLLS YA + KW E ++R M G K G S +E
Sbjct: 465 DLGVSVGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREVRKLMSSRGTNKSAGWSLMEA 524
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ ++H+F++GD H QIY + + + + GY P VLHDI + EK A+ +HS
Sbjct: 525 HGKVHKFLVGDTYHKDSVQIYDTLDMINKRLTEAGYVPDVSSVLHDIGEEEKVHAVKVHS 584
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMI 455
ERLAI YG I + + IR+VKNLRVC DCH I
Sbjct: 585 ERLAIAYGFIVLEAGSPIRIVKNLRVCGDCHEFI 618
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 112/278 (40%), Gaps = 54/278 (19%)
Query: 101 LDLFREMQRDNVRPNEVTIVCV------------LSACSQLGALELGRWIHSYMGKHRID 148
L LF +R N P+ T + SACS LG+ +H+ K
Sbjct: 126 LTLFSRFRRRN--PHSFTFLLASISNHLNAAGPSASACSFLGS-----HVHALAVKAGAA 178
Query: 149 LNHIVGGALINMYSRCGDIDKALQVFEEMKE-RDVTTYNSLIAGLAMHGRSIEAVE---- 203
+ V AL++ Y GD+ +VF+E+ RDV T+N ++AG G A E
Sbjct: 179 GDLFVRNALVHFYGVSGDVGAMRRVFDELPRVRDVLTWNEVLAGYVRAGMMTVAREVFDE 238
Query: 204 ---------------------------MFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
+FR M+ QG+RP + V L+A + GL++ G
Sbjct: 239 MPVRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGVRPNQAAVVTALSAAARLGLLEHG 298
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
+ ++ + G+ + +VD+ ++ G A + M+ D +++
Sbjct: 299 -KFVHNVVQRSGMPVCMNVGAALVDMYAKCGCVAVAREVFDGMR-RRDVFAWNAMICGLA 356
Query: 297 IHGKLQLGEQIAKRLL-DCRSADSGTYVLLSNAYASSG 333
HG + ++ +R + + S + T+V + N + SG
Sbjct: 357 AHGLGRDAVELFERFISEGLSPTNVTFVGVLNGCSRSG 394
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/440 (42%), Positives = 278/440 (63%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D+ AS +++ Y + GL+ A F + VKDT+ + A++ G V+NG+ A +F++MQ
Sbjct: 341 DLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQ 400
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
N+ P+ T+V ++ ACS L AL+ G+ H + + L + +LI+MY++CG ID
Sbjct: 401 ACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKID 460
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+ QVF++M RDV ++N++IAG +HG EA +F M NQG P VTF+ ++ ACS
Sbjct: 461 LSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACS 520
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLV G F +MT YGI P++EHY C+VDLL+R G +EAY FI +M + D +
Sbjct: 521 HSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVW 580
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
G+LL AC+IH + LG+Q+++ + +G +VLLSN ++++G++ EA ++R K
Sbjct: 581 GALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVK 640
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
G +K PG S IE+N +H F+ GD HP IY ++ + +K GY T VL D+
Sbjct: 641 GFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDL 700
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
E+ EKE AL HSE+LAI +G++S TI V KNLRVC DCH+ IK + + R IIV
Sbjct: 701 EEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIV 760
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD NRFHHF+NG CSCG++W
Sbjct: 761 RDTNRFHHFKNGQCSCGNFW 780
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 142/287 (49%), Gaps = 8/287 (2%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
D+ ST +I+ Y+ A VF+++ ++D V W AM+ G +G A+ +M
Sbjct: 133 TDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDM 192
Query: 108 Q-RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH---IVGGALINMYSR 163
Q +RPN T+V +L +Q GAL G IH+Y + ++ N ++G AL++MY++
Sbjct: 193 QDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAK 252
Query: 164 CGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVG- 222
C + A +VF M R+ T+++LI G + R EA +F++M+ +G+ T V
Sbjct: 253 CKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVAS 312
Query: 223 VLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIA 282
L C+ + +G ++ ++ GI + ++ + ++ G EA F + +
Sbjct: 313 ALRVCASLADLHMGTQL-HALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVK 371
Query: 283 PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNA 328
D I G+LLS C +GK + + K++ C D T V L A
Sbjct: 372 -DTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPA 417
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 159/333 (47%), Gaps = 18/333 (5%)
Query: 13 GLRSNRSTRLKLVELYGKCGEFKDAMQL----FDEMPECND--VVASTVMINCYVEHGLV 66
GLR N ST + L+ L + G + E N+ V+ T +++ Y + +
Sbjct: 197 GLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQL 256
Query: 67 ENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV-RPNEVTIVCVLSA 125
A VF + V++ V W+A+I G V M A +LF++M + + + ++ L
Sbjct: 257 VYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRV 316
Query: 126 CSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTY 185
C+ L L +G +H+ + K I + +L++MY++ G I++A F+E+ +D +Y
Sbjct: 317 CASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISY 376
Query: 186 NSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS-MT 244
+L++G +G++ EA +F++M + P T V ++ ACSH + G S +
Sbjct: 377 GALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVII 436
Query: 245 RDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLG 304
R +E I ++D+ ++ G+ + + M A D + ++++ IHG LG
Sbjct: 437 RGLALETSI--CNSLIDMYAKCGKIDLSRQVFDKMP-ARDVVSWNTMIAGYGIHG---LG 490
Query: 305 EQIAKRLLDCR----SADSGTYVLLSNAYASSG 333
++ L + + D T++ L A + SG
Sbjct: 491 KEATTLFLGMKNQGFAPDDVTFICLIAACSHSG 523
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 89/181 (49%), Gaps = 1/181 (0%)
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
++ G + A +VF R+ D + A+I G A+DL+R M R V PN+ T
Sbjct: 44 HISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTF 103
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
VL ACS L L GR IH++ + + V ALI++Y RC A VF +M
Sbjct: 104 PFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPM 163
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ-GIRPTKVTFVGVLNACSHGGLVDLGFE 238
RDV +N+++AG A HG A+ +M + G+RP T V +L + G + G
Sbjct: 164 RDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTS 223
Query: 239 I 239
I
Sbjct: 224 I 224
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 39/242 (16%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ HG V+ GL S L+++Y KCG+ + Q+FD+MP DVV+ MI Y
Sbjct: 427 GKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMP-ARDVVSWNTMIAGYG 485
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HGL + A LF M+ P++VT +C
Sbjct: 486 IHGLGK-------------------------------EATTLFLGMKNQGFAPDDVTFIC 514
Query: 122 VLSACSQLGALELGR-WIHSYMGKHRI--DLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
+++ACS G + G+ W + K+ I + H + ++++ +R G +D+A Q + M
Sbjct: 515 LIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYI--CMVDLLARGGLLDEAYQFIQSMP 572
Query: 179 -ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
+ DV + +L+ +H ++I+ + +I + FV + N S G D
Sbjct: 573 LKADVRVWGALLGACRIH-KNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAA 631
Query: 238 EI 239
E+
Sbjct: 632 EV 633
>gi|194696956|gb|ACF82562.1| unknown [Zea mays]
gi|413957085|gb|AFW89734.1| selenium-binding protein-like protein [Zea mays]
Length = 605
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/487 (39%), Positives = 297/487 (60%), Gaps = 2/487 (0%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
++H +LKLG ++ + L+ Y A ++F DVV+ T M+ ++
Sbjct: 119 QLHALLLKLGFHAHTQSLNALLAAYLANARPDLASRVFRGGGGALDVVSWTTMVGGLLKL 178
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
GL ++A +F + ++ V W AM+ G V+ AL++F EM+ V N +
Sbjct: 179 GLFDDARVLFDGMPERNLVSWNAMMSGYVKACRFLDALEVFDEMRARGVDGNVFVAATAV 238
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE--EMKERD 181
AC+ GAL GR +H ++ + I ++ + A+++MY +CG +++A +VFE + +
Sbjct: 239 VACTGAGALARGREVHRWVEQSGIQMDEKLATAVVDMYCKCGCVEEAWRVFEALPLAAKG 298
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+TT+N +I G A+HGR +A+++F M +G+ P VT V VL AC+H G++ G F
Sbjct: 299 LTTWNCMIGGFAVHGRGEDALKLFGRMEREGVAPDDVTLVNVLTACAHAGMLSEGRHYFN 358
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+ + YGIEP++EHYGC+VDL R GR EEA I +M + PD +LG+L A KIHG +
Sbjct: 359 YVPQRYGIEPKMEHYGCMVDLYGRAGRLEEAKKVIQDMPMEPDVGVLGALFGASKIHGDV 418
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
LGE I R+++ +SG YVLL+N A++G+W++ ++R M E V KE G S IEV
Sbjct: 419 DLGEAIGWRVIELDPQNSGRYVLLANLLATAGRWEDVARVRRLMDERNVSKEAGRSVIEV 478
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
E+ EF G + HP+ E++Y +++ + ++ EGY P T VLH I + EKE L HS
Sbjct: 479 QGEVCEFQCGGLCHPRAEEVYAMARDMMREIRAEGYVPDTRDVLHAIAEEEKETPLLYHS 538
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GL+ T+P T+R+ KNLRVC DCH K ++ + +R+I+VRDRNRFHHF++G
Sbjct: 539 EKLAIAFGLLHTRPGDTMRITKNLRVCRDCHEATKFVSRVFERQIVVRDRNRFHHFKDGQ 598
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 599 CSCKDYW 605
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 34/198 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMP-ECNDVVASTVMINCY 60
GRE+H V + G++ + +V++Y KCG ++A ++F+ +P + MI +
Sbjct: 250 GREVHRWVEQSGIQMDEKLATAVVDMYCKCGCVEEAWRVFEALPLAAKGLTTWNCMIGGF 309
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG E+A ++F R M+R+ V P++VT+V
Sbjct: 310 AVHGRGEDALKLFGR-------------------------------MEREGVAPDDVTLV 338
Query: 121 CVLSACSQLGALELGRWIHSYMG-KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
VL+AC+ G L GR +Y+ ++ I+ G ++++Y R G +++A +V ++M
Sbjct: 339 NVLTACAHAGMLSEGRHYFNYVPQRYGIEPKMEHYGCMVDLYGRAGRLEEAKKVIQDMPM 398
Query: 179 ERDVTTYNSLIAGLAMHG 196
E DV +L +HG
Sbjct: 399 EPDVGVLGALFGASKIHG 416
>gi|226493697|ref|NP_001147320.1| selenium-binding protein-like [Zea mays]
gi|195609890|gb|ACG26775.1| selenium-binding protein-like [Zea mays]
Length = 605
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/487 (39%), Positives = 296/487 (60%), Gaps = 2/487 (0%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
++H +LKLG ++ + L+ Y A ++F DVV+ T M+ ++
Sbjct: 119 QLHALLLKLGFHAHTQSLNALLAAYLANARPDLASRVFRGGGGALDVVSWTTMVGGLLKL 178
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
GL ++A +F + ++ V W AM+ G V+ AL++F EM+ V N +
Sbjct: 179 GLFDDARVLFDGMPERNLVSWNAMMSGYVKACRFLDALEVFDEMRARGVDGNVFVAATAV 238
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE--EMKERD 181
AC+ GAL GR +H ++ + I ++ + A+++MY +CG +++A +VFE + +
Sbjct: 239 VACTGAGALARGREVHRWVEQSGIQMDEKLATAVVDMYCKCGCVEEAWRVFEALPLAAKG 298
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+TT+N +I G A+HGR +A+++F M +G+ P VT V VL AC+H G++ G F
Sbjct: 299 LTTWNCMIGGFAVHGRGQDALKLFGRMEREGVAPDDVTLVNVLTACAHAGMLSEGRHYFN 358
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+ + YGIEP++EHYGC+VDL R GR EEA I +M + PD +LG+L A KIHG +
Sbjct: 359 YVPQRYGIEPKMEHYGCMVDLYGRAGRLEEAKKVIQDMPMEPDVGVLGALFGASKIHGDV 418
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
LGE I R+++ +SG YVLL+N A++G+W++ ++R M E V KE G S IEV
Sbjct: 419 DLGEAIGWRVIELDPQNSGRYVLLANLLATAGRWEDVARVRRLMDERNVSKEAGRSVIEV 478
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
E+ EF G + HP+ E++Y ++ + ++ EGY P T VLH I + EKE L HS
Sbjct: 479 QGEVCEFQCGGLCHPRAEEVYAMASDMMRKIRAEGYVPDTRDVLHAIAEEEKETPLLYHS 538
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GL+ T+P T+R+ KNLRVC DCH K ++ + +R+I+VRDRNRFHHF++G
Sbjct: 539 EKLAIAFGLLHTRPGDTMRITKNLRVCRDCHEATKFVSRVFERQIVVRDRNRFHHFKDGQ 598
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 599 CSCKDYW 605
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 32/197 (16%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GRE+H V + G++ + +V++Y KCG ++A ++F+ +P
Sbjct: 250 GREVHRWVEQSGIQMDEKLATAVVDMYCKCGCVEEAWRVFEALP---------------- 293
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ K W MI G +G AL LF M+R+ V P++VT+V
Sbjct: 294 --------------LAAKGLTTWNCMIGGFAVHGRGQDALKLFGRMEREGVAPDDVTLVN 339
Query: 122 VLSACSQLGALELGRWIHSYMG-KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VL+AC+ G L GR +Y+ ++ I+ G ++++Y R G +++A +V ++M E
Sbjct: 340 VLTACAHAGMLSEGRHYFNYVPQRYGIEPKMEHYGCMVDLYGRAGRLEEAKKVIQDMPME 399
Query: 180 RDVTTYNSLIAGLAMHG 196
DV +L +HG
Sbjct: 400 PDVGVLGALFGASKIHG 416
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/440 (42%), Positives = 278/440 (63%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D+ AS +++ Y + GL+ A F + VKDT+ + A++ G V+NG+ A +F++MQ
Sbjct: 341 DLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQ 400
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
N+ P+ T+V ++ ACS L AL+ G+ H + + L + +LI+MY++CG ID
Sbjct: 401 ACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKID 460
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+ QVF++M RDV ++N++IAG +HG EA +F M NQG P VTF+ ++ ACS
Sbjct: 461 LSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACS 520
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLV G F +MT YGI P++EHY C+VDLL+R G +EAY FI +M + D +
Sbjct: 521 HSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVW 580
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
G+LL AC+IH + LG+Q+++ + +G +VLLSN ++++G++ EA ++R K
Sbjct: 581 GALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVK 640
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
G +K PG S IE+N +H F+ GD HP IY ++ + +K GY T VL D+
Sbjct: 641 GFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDL 700
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
E+ EKE AL HSE+LAI +G++S TI V KNLRVC DCH+ IK + + R IIV
Sbjct: 701 EEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIV 760
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD NRFHHF+NG CSCG++W
Sbjct: 761 RDTNRFHHFKNGQCSCGNFW 780
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 142/287 (49%), Gaps = 8/287 (2%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
D+ ST +I+ Y+ A VF+++ ++D V W AM+ G +G A+ +M
Sbjct: 133 TDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDM 192
Query: 108 Q-RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH---IVGGALINMYSR 163
Q +RPN T+V +L +Q GAL G IH+Y + ++ N ++G AL++MY++
Sbjct: 193 QDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAK 252
Query: 164 CGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVG- 222
C + A +VF M R+ T+++LI G + R EA +F++M+ +G+ T V
Sbjct: 253 CKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVAS 312
Query: 223 VLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIA 282
L C+ + +G ++ ++ GI + ++ + ++ G EA F + +
Sbjct: 313 ALRVCASLADLHMGTQL-HALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVK 371
Query: 283 PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNA 328
D I G+LLS C +GK + + K++ C D T V L A
Sbjct: 372 -DTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPA 417
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 159/333 (47%), Gaps = 18/333 (5%)
Query: 13 GLRSNRSTRLKLVELYGKCGEFKDAMQL----FDEMPECND--VVASTVMINCYVEHGLV 66
GLR N ST + L+ L + G + E N+ V+ T +++ Y + +
Sbjct: 197 GLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQL 256
Query: 67 ENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV-RPNEVTIVCVLSA 125
A VF + V++ V W+A+I G V M A +LF++M + + + ++ L
Sbjct: 257 VYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRV 316
Query: 126 CSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTY 185
C+ L L +G +H+ + K I + +L++MY++ G I++A F+E+ +D +Y
Sbjct: 317 CASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISY 376
Query: 186 NSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS-MT 244
+L++G +G++ EA +F++M + P T V ++ ACSH + G S +
Sbjct: 377 GALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVII 436
Query: 245 RDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLG 304
R +E I ++D+ ++ G+ + + M A D + ++++ IHG LG
Sbjct: 437 RGLALETSI--CNSLIDMYAKCGKIDLSRQVFDKMP-ARDVVSWNTMIAGYGIHG---LG 490
Query: 305 EQIAKRLLDCR----SADSGTYVLLSNAYASSG 333
++ L + + D T++ L A + SG
Sbjct: 491 KEATTLFLGMKNQGFAPDDVTFICLIAACSHSG 523
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 89/181 (49%), Gaps = 1/181 (0%)
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
++ G + A +VF R+ D + A+I G A+DL+R M R V PN+ T
Sbjct: 44 HISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTF 103
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
VL ACS L L GR IH++ + + V ALI++Y RC A VF +M
Sbjct: 104 PFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPM 163
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ-GIRPTKVTFVGVLNACSHGGLVDLGFE 238
RDV +N+++AG A HG A+ +M + G+RP T V +L + G + G
Sbjct: 164 RDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTS 223
Query: 239 I 239
I
Sbjct: 224 I 224
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 39/242 (16%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ HG V+ GL S L+++Y KCG+ + Q+FD+MP DVV+ MI Y
Sbjct: 427 GKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMP-ARDVVSWNTMIAGYG 485
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HGL + A LF M+ P++VT +C
Sbjct: 486 IHGLGK-------------------------------EATTLFLGMKNQGFAPDDVTFIC 514
Query: 122 VLSACSQLGALELGR-WIHSYMGKHRI--DLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
+++ACS G + G+ W + K+ I + H + ++++ +R G +D+A Q + M
Sbjct: 515 LIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYI--CMVDLLARGGLLDEAYQFIQSMP 572
Query: 179 -ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
+ DV + +L+ +H ++I+ + +I + FV + N S G D
Sbjct: 573 LKADVRVWGALLGACRIH-KNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAA 631
Query: 238 EI 239
E+
Sbjct: 632 EV 633
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/440 (40%), Positives = 271/440 (61%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D+ ++N Y G E AF +F + KD + W +I G ++ +AL +F +M
Sbjct: 481 DISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMS 540
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ + N T + +SA + L ++ G+ +H K V ALI++Y +CG I+
Sbjct: 541 QAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIE 600
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +F EM R+ ++N++I + HGR +EA+++F +M +G++P VTF+GVL ACS
Sbjct: 601 DAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACS 660
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLV+ G F+SM+ YG+ P +HY C+VD+L R G+ + A F+ M I + ++
Sbjct: 661 HVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIW 720
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+LLSACK+H +++GE AK LL+ DS +YVLLSNAYA +GKW Q+R MK+
Sbjct: 721 RTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDR 780
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
G++KEPG S IEV N +H F +GD HP +QIYK + EL + GY + H+
Sbjct: 781 GIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENPNLFHEK 840
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
E +K+ +HSE+LA+ +GL++ P +RV+KNLRVC+DCHS +K + +T+R+I++
Sbjct: 841 EQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMKFTSEVTRREIVL 900
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD RFHHF +G+CSCGDYW
Sbjct: 901 RDVYRFHHFNSGSCSCGDYW 920
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 173/382 (45%), Gaps = 47/382 (12%)
Query: 14 LRSNRSTRLKLVELYGKCGEFKDAMQLFDEM------PEC-------------------- 47
L +R T L+ + +CG + A+Q+FDEM P+C
Sbjct: 206 LFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGK 265
Query: 48 ------------NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNG 95
D + +++ YV+ G +E A ++F+ + V W M+ +
Sbjct: 266 QLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQIS 325
Query: 96 EMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGG 155
++A++ ++F +MQ + PN+ T C+L C+ G +ELG IHS K+ + + V G
Sbjct: 326 DLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSG 385
Query: 156 ALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRP 215
LI+MYS+ +DKA ++ E +++RDV ++ S+IAG H EA+ F+EM + G+ P
Sbjct: 386 VLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWP 445
Query: 216 TKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDF 275
+ +AC+ + G +I + G I + +V+L +R GR EEA+
Sbjct: 446 DNIGLASAASACAGIKAMRQGLQI-HARVYVSGYAADISIWNTLVNLYARCGRSEEAFSL 504
Query: 276 ITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG----TYVLLSNAYAS 331
+ D I L+S G+ +L EQ + A + T++ +A A+
Sbjct: 505 FREID-HKDEITWNGLISG---FGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALAN 560
Query: 332 SGKWKEAVQIRAKMKEAGVQKE 353
K+ Q+ + + G E
Sbjct: 561 LADIKQGKQVHGRAVKTGHTSE 582
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 166/376 (44%), Gaps = 68/376 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR IH QV K S L+ LY G FK A ++F +M C
Sbjct: 162 QGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFC------------- 208
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
D V + +I G + G AL +F EMQ +RP+ VT+
Sbjct: 209 -------------------DRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVA 249
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L+AC+ +G L+ G+ +HSY+ K + ++I G+L+++Y +CGDI+ A +F
Sbjct: 250 SLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRT 309
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+V +N ++ ++ E+F +M GI P K T+ +L C+ G ++LG +I
Sbjct: 310 NVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQI- 368
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA------------------------YDF- 275
S++ G E + G ++D+ S+ ++A +DF
Sbjct: 369 HSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFC 428
Query: 276 ---------ITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL-LDCRSADSGTYVLL 325
+ + + PD+I L S SAC ++ G QI R+ + +AD + L
Sbjct: 429 EEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTL 488
Query: 326 SNAYASSGKWKEAVQI 341
N YA G+ +EA +
Sbjct: 489 VNLYARCGRSEEAFSL 504
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 131/298 (43%), Gaps = 45/298 (15%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D + ++I+ Y ++GLV A +VF + +D V W AM+ G + G A L+ +M
Sbjct: 77 DRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMH 136
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
V P + VLSAC++ GR IH+ + K VG ALI +Y G
Sbjct: 137 WTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFK 196
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +VF +M D T+N+LI+G A G A+++F EM G+RP VT +L AC+
Sbjct: 197 LAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACA 256
Query: 229 HGGLVDLGFEIFQ-----SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFI-----TN 278
G + G ++ M+ DY E G ++DL + G E A+D TN
Sbjct: 257 SVGDLQKGKQLHSYLLKAGMSFDYITE------GSLLDLYVKCGDIETAHDIFNLGDRTN 310
Query: 279 M-----------------------------KIAPDHIMLGSLLSACKIHGKLQLGEQI 307
+ I P+ +L C G+++LGEQI
Sbjct: 311 VVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQI 368
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 37/207 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+++HG+ +K G S L+ LYGKCG +DA +F EM N+V +T++ +C
Sbjct: 566 QGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSC- 624
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++G ALDLF +M+++ ++PN+VT +
Sbjct: 625 -------------------------------SQHGRGLEALDLFDQMKQEGLKPNDVTFI 653
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG--GALINMYSRCGDIDKALQVFEEMK 178
VL+ACS +G +E G M + LN I ++++ R G +D+A + +EM
Sbjct: 654 GVLAACSHVGLVEEGLSYFKSM-SNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMP 712
Query: 179 -ERDVTTYNSLIAGLAMHGRSIEAVEM 204
+ + +L++ +H ++IE E+
Sbjct: 713 ITANAMIWRTLLSACKVH-KNIEIGEL 738
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 98/232 (42%), Gaps = 42/232 (18%)
Query: 119 IVCVLSACSQLGALELGRW-----IHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
+ C L AC G RW IH+ + + ++G LI++Y++ G + +A QV
Sbjct: 45 LTCALQACRGRG----NRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQV 100
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV 233
F+E+ RD ++ ++++G A G EA ++ +M + PT VL+AC+ G L
Sbjct: 101 FKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLF 160
Query: 234 DLGFEIFQSMTRD------------------YGIEPQIEHYGCIVDLLSRV--------- 266
G I + + +G E C + RV
Sbjct: 161 AQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGH 220
Query: 267 ---GRPEEAYDFITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
G E A M+++ PD + + SLL+AC G LQ G+Q+ LL
Sbjct: 221 AQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLL 272
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/442 (40%), Positives = 276/442 (62%), Gaps = 1/442 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
ND T +++ YV H V++A VFS + VKD WT M+ G RA+ F +M
Sbjct: 256 NDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKM 315
Query: 108 QR-DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
N++ + + ++ +LS+CS GAL+ GR +H+ K N VG A+I+MY+ CG+
Sbjct: 316 LGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGN 375
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
++ A + F M E+DV +N++IAG M+G +A+++F +M G+ P + TFV VL A
Sbjct: 376 LEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYA 435
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
CSH G+V G +IF M + + P ++HY C++D+L R G+ + AY FI NM PD
Sbjct: 436 CSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFD 495
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
+ +LL AC+IHG ++LG +I++++ + D+G YVLLSN YA +G W+ RA ++
Sbjct: 496 VYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLR 555
Query: 347 EAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH 406
++K+PG SSIE+N EI+ F+ G+ HPQ +I ++ L +K GY P+T V+L
Sbjct: 556 SKRMKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQ 615
Query: 407 DIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKI 466
D+ D K+ L HSE++AI +GL+ TKP T IR+ KNLR C+DCH+ K ++ + R +
Sbjct: 616 DVSDDMKKDILYHHSEKMAIAFGLMRTKPETIIRITKNLRTCDDCHTASKFVSKVFGRVL 675
Query: 467 IVRDRNRFHHFENGTCSCGDYW 488
+++D NRFH F++G CSC DYW
Sbjct: 676 VIKDANRFHVFQDGVCSCRDYW 697
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 157/339 (46%), Gaps = 37/339 (10%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
++ S ++N YV GL+ +A ++F K+ V WT +I GL +N A+D+FREM
Sbjct: 54 HNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREM 113
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
N +PN VTI VL A + LG + + + +H + + + N V AL++MYS+ G +
Sbjct: 114 IMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCM 173
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A Q+FE M ER+V T+N++++G + HG S EA+++F M +G+ T + ++ A
Sbjct: 174 GVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPAS 233
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAP---- 283
G + +G I + R G E ++D+ ++A+ + M +
Sbjct: 234 LSVGCLQVGTGIHGFIIRT-GYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAW 292
Query: 284 -------------------------------DHIMLGSLLSACKIHGKLQLGEQI-AKRL 311
D I L +LS+C G LQ G ++ A +
Sbjct: 293 TLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAI 352
Query: 312 LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
C + + + + YA+ G ++A + M E V
Sbjct: 353 KTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDV 391
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 144/302 (47%), Gaps = 10/302 (3%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
+V T +++ Y + G + A ++F + ++ V W A++ G +G A+DLF M+
Sbjct: 156 NVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMR 215
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
R + + TI+ ++ A +G L++G IH ++ + + + + AL+++Y +D
Sbjct: 216 RKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVD 275
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN-QGIRPTKVTFVGVLNAC 227
A +VF EM +DV + ++ G + A++ F +M+ Q ++ + +G+L++C
Sbjct: 276 DAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSC 335
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SH G + G + ++ I ++D+ + G E+A F M D +
Sbjct: 336 SHSGALQQGRRV-HALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMG-EKDVVC 393
Query: 288 LGSLLSACKIHG----KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRA 343
++++ ++G + L Q+ LD D T+V + A + +G E +QI
Sbjct: 394 WNAMIAGNGMNGYGTDAIDLFLQMKGSGLD---PDESTFVSVLYACSHAGMVYEGLQIFY 450
Query: 344 KM 345
M
Sbjct: 451 HM 452
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 85/200 (42%), Gaps = 38/200 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR +H +K +N ++++Y CG +DA + F M E
Sbjct: 343 QGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGE-------------- 388
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
KD VCW AMI G NG A+DLF +M+ + P+E T V
Sbjct: 389 ------------------KDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFV 430
Query: 121 CVLSACSQLGALELGRWIHSYMGK--HRI-DLNHIVGGALINMYSRCGDIDKALQVFEEM 177
VL ACS G + G I +M K H I +L H +I++ R G +D A M
Sbjct: 431 SVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHY--ACVIDILGRAGQLDAAYSFINNM 488
Query: 178 K-ERDVTTYNSLIAGLAMHG 196
+ D Y++L+ +HG
Sbjct: 489 PFQPDFDVYSTLLGACRIHG 508
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 108/278 (38%), Gaps = 75/278 (26%)
Query: 138 IHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR 197
IH+ + + N + +L+N Y CG + A Q+F ++V ++ LI+GLA +
Sbjct: 43 IHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKNDC 102
Query: 198 SIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL-----------GFE-------- 238
+EA+++FREMI +P VT VL A ++ GL+ + GFE
Sbjct: 103 FVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETA 162
Query: 239 ----------------IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---------- 272
+F+SM+ E + + IV S G EEA
Sbjct: 163 LVDMYSKFGCMGVARQLFESMS-----ERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRK 217
Query: 273 ---YDFITNMKIAPDHIMLGSLLSACKIHGKL-----QLGEQIAKRLLDCRSA------- 317
DF T M + P + +G L IHG + + + I L+D +
Sbjct: 218 GLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDA 277
Query: 318 ----------DSGTYVLLSNAYASSGKWKEAVQIRAKM 345
D + L+ ++S W A++ KM
Sbjct: 278 HRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKM 315
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/437 (44%), Positives = 284/437 (64%), Gaps = 2/437 (0%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM--QRDN 111
T +++ Y + G V NA VF+++ VK+ V W+AMI +NG+ AL+LFRE+ + +
Sbjct: 214 TTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQD 273
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
+ PN VT+V VL AC+ L ALE GR IH Y+ + +D V AL+ MY+RCG ++
Sbjct: 274 LCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQ 333
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
+VF++M +RDV ++NSLI+ +HG +A+ +F EM G+ P+ ++FV VL ACSH G
Sbjct: 334 RVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAG 393
Query: 232 LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSL 291
LVD G +F SM +GI P +EHY C+VDLL R R EEA I NM+I P + GSL
Sbjct: 394 LVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRIEPGPKVWGSL 453
Query: 292 LSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
L +C+IH ++L E+ + RL D ++G YVLL++ YA +G W +++ ++ G+Q
Sbjct: 454 LGSCRIHCNVELAERASIRLFDLEPTNAGNYVLLADIYAEAGMWDGVKRVKKLLEARGLQ 513
Query: 352 KEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDW 411
K PG S IEV +I+ F+ D +P+ EQ++ + +L +K EGY P T+VVL+D++
Sbjct: 514 KVPGRSWIEVKRKIYSFVSVDEVNPRMEQLHALLVKLSMELKEEGYVPQTKVVLYDLKAA 573
Query: 412 EKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDR 471
EKE + HSE+LA+ +GLI++ IR+ K+LR+C DCHS K I+ ++I+VRD
Sbjct: 574 EKERIVLGHSEKLAVAFGLINSSKGEVIRITKSLRLCEDCHSFTKFISKFANKEILVRDV 633
Query: 472 NRFHHFENGTCSCGDYW 488
NRFHHF +G CSCGDYW
Sbjct: 634 NRFHHFRDGVCSCGDYW 650
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 127/257 (49%), Gaps = 8/257 (3%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D +T +IN Y ++NA +VF + + + + A+ L G L+++R M
Sbjct: 104 DPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMN 163
Query: 109 RDNVRPNEVTIVCVLSACSQ----LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC 164
+ + T VL AC + L GR IH+++ +H D + L++MY++
Sbjct: 164 SIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKF 223
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI--NQGIRPTKVTFVG 222
G + A VF +M ++V +++++IA A +G++ EA+E+FRE++ Q + P VT V
Sbjct: 224 GCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVS 283
Query: 223 VLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIA 282
VL AC+ ++ G I + R G++ + +V + +R G+ E M
Sbjct: 284 VLQACAALAALEQGRLIHGYILRK-GLDSILPVISALVTMYARCGKLELGQRVFDQMD-K 341
Query: 283 PDHIMLGSLLSACKIHG 299
D + SL+S+ +HG
Sbjct: 342 RDVVSWNSLISSYGVHG 358
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 93/187 (49%), Gaps = 13/187 (6%)
Query: 87 MIDGLVRNGEMARALDLFREMQRDNVRPNEV--TIVCVLSACSQLGALELGRWIHSYMGK 144
+I L + G + +AL+L ++ PN T ++ +C+ +L + +H ++ +
Sbjct: 45 LIQSLCKQGNLTQALELL------SLEPNPAQHTYELLILSCTHQNSLLDAQRVHRHLLE 98
Query: 145 HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEM 204
+ D + + LINMYS ID A +VF++ + R + YN+L L++ G E + M
Sbjct: 99 NGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNM 158
Query: 205 FREMINQGIRPTKVTFVGVLNACSHG----GLVDLGFEIFQSMTRDYGIEPQIEHYGCIV 260
+R M + GI + T+ VL AC L++ G EI + R +G + + +V
Sbjct: 159 YRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILR-HGYDGYVHIMTTLV 217
Query: 261 DLLSRVG 267
D+ ++ G
Sbjct: 218 DMYAKFG 224
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 34/197 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR IHG +L+ GL S LV +Y +CG+ + ++FD+M + DVV+ +I+ Y
Sbjct: 296 QGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMDK-RDVVSWNSLISSY 354
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG + +A+ +F EM + V P+ ++ V
Sbjct: 355 GVHGFGK-------------------------------KAIGIFEEMTYNGVEPSPISFV 383
Query: 121 CVLSACSQLGALELGRWIHSYMG-KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
VL ACS G ++ G+ + + M H I + ++++ R +++A ++ E M+
Sbjct: 384 SVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRI 443
Query: 179 ERDVTTYNSLIAGLAMH 195
E + SL+ +H
Sbjct: 444 EPGPKVWGSLLGSCRIH 460
>gi|357467379|ref|XP_003603974.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493022|gb|AES74225.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 566
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/466 (42%), Positives = 288/466 (61%), Gaps = 8/466 (1%)
Query: 31 CGEFKDAMQ------LFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCW 84
CG K Q ++M D+ +I+ Y E G + A +VF R+ +D V W
Sbjct: 101 CGRLKLTQQAKQLHGFINKMGFGFDLYIQNALIHMYSEIGELVIARQVFDRMSHRDVVSW 160
Query: 85 TAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGK 144
T+MI G V + A+ LF+ M V NE T++ VL C+ GAL +GR +H + +
Sbjct: 161 TSMIAGFVNHHLTVEAIQLFQRMLEVGVDVNEATVISVLRGCADSGALSVGRKVHGIVKE 220
Query: 145 HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEM 204
ID V ALI+MYS+CG ++ A +VF+++ +RDV + ++I GLA HG EA+E+
Sbjct: 221 KGIDFKANVCTALIHMYSKCGCLESAREVFDDVLDRDVFVWTAMIYGLACHGMCKEAIEL 280
Query: 205 FREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLS 264
F EM ++P + T + VL+A + GLV G+ F + + Y ++P I+H+GC+VDLL+
Sbjct: 281 FLEMETCNVKPDERTIMVVLSAYRNAGLVREGYMFFNDVQKRYSMKPNIKHFGCMVDLLA 340
Query: 265 RVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL-LDCRSA-DSGTY 322
+ G EEA DFI M + PD ++ +L+ ACK+H + E++ K L L SA DSG+Y
Sbjct: 341 KGGCLEEAEDFINAMPMKPDAVIWRTLIWACKVHADTERAERLMKHLELQGMSAHDSGSY 400
Query: 323 VLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIY 382
+L SN YAS+GKW + ++R M + G+ K PG S IEV+ +HEF++GD HP E+I+
Sbjct: 401 ILASNVYASTGKWCDKAEVRELMNKKGLVKPPGSSRIEVDGVVHEFVMGDYDHPDTEKIF 460
Query: 383 KKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVV 442
K+ ++ ++ EGY+P V+ +++D EK L HSE+LA+ YGLI T P + IR+V
Sbjct: 461 IKLDQMVDKLRKEGYNPKVSEVMLEMDDEEKAIQLLHHSEKLALAYGLIRTCPGSKIRIV 520
Query: 443 KNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
KNLR C DCH +KLI+ + +R IIVRDR RFHHF+NG CSC DYW
Sbjct: 521 KNLRSCEDCHEFMKLISKVYQRDIIVRDRIRFHHFKNGDCSCKDYW 566
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 128/258 (49%), Gaps = 12/258 (4%)
Query: 99 RALDLFREMQRDNV---RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGG 155
+AL LF M + + +P+ T L +C +L + + +H ++ K + +
Sbjct: 71 QALSLFIFMLQPHTNVPKPDTFTYSFALKSCGRLKLTQQAKQLHGFINKMGFGFDLYIQN 130
Query: 156 ALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRP 215
ALI+MYS G++ A QVF+ M RDV ++ S+IAG H ++EA+++F+ M+ G+
Sbjct: 131 ALIHMYSEIGELVIARQVFDRMSHRDVVSWTSMIAGFVNHHLTVEAIQLFQRMLEVGVDV 190
Query: 216 TKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDF 275
+ T + VL C+ G + +G ++ + ++ GI+ + ++ + S+ G E A +
Sbjct: 191 NEATVISVLRGCADSGALSVGRKV-HGIVKEKGIDFKANVCTALIHMYSKCGCLESAREV 249
Query: 276 ITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNAYASSGK 334
++ + D + +++ HG + ++ + C D T +++ +AY ++G
Sbjct: 250 FDDV-LDRDVFVWTAMIYGLACHGMCKEAIELFLEMETCNVKPDERTIMVVLSAYRNAGL 308
Query: 335 WKEA------VQIRAKMK 346
+E VQ R MK
Sbjct: 309 VREGYMFFNDVQKRYSMK 326
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 95/216 (43%), Gaps = 38/216 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++HG V + G+ + L+ +Y KCG + A ++FD++ + DV T MI
Sbjct: 211 GRKVHGIVKEKGIDFKANVCTALIHMYSKCGCLESAREVFDDVLD-RDVFVWTAMIYGLA 269
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG+ + A E LF EM+ NV+P+E TI+
Sbjct: 270 CHGMCKEAIE-------------------------------LFLEMETCNVKPDERTIMV 298
Query: 122 VLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
VLSA G + G + + K + ++ H G ++++ ++ G +++A M
Sbjct: 299 VLSAYRNAGLVREGYMFFNDVQKRYSMKPNIKHF--GCMVDLLAKGGCLEEAEDFINAMP 356
Query: 179 ER-DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGI 213
+ D + +LI +H + A + + + QG+
Sbjct: 357 MKPDAVIWRTLIWACKVHADTERAERLMKHLELQGM 392
>gi|218192417|gb|EEC74844.1| hypothetical protein OsI_10704 [Oryza sativa Indica Group]
Length = 614
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/490 (38%), Positives = 285/490 (58%), Gaps = 39/490 (7%)
Query: 27 LYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVF------------- 73
+Y +CG DA Q+F+EM + DVV+ MI+ + GL A +VF
Sbjct: 1 MYARCGRPDDAYQMFEEM-QYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDA 59
Query: 74 ----------SRVKVKDT---------------VCWTAMIDGLVRNGEMARALDLFREMQ 108
+ +V+D + W AM+ N A++LF MQ
Sbjct: 60 GTMASILPSMGKARVEDIALLKGVFDEMRFTGLISWNAMLAVYTNNEMHVEAVELFMRMQ 119
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+D + P+ VT+ VL +C ++ AL LG+ IH + + R+ + ++ AL++MY+ CG +
Sbjct: 120 KDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLK 179
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+A VF+ M RDV ++ S+I+ HG EA+++F +M QG+ P + FV +L ACS
Sbjct: 180 EARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACS 239
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GL+D+G F SMT ++ I P++EHY C+VDLL R G EAYDFI M I P+ +
Sbjct: 240 HAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVW 299
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
G+LL AC+IH + +G A LL +G YVLLSN YA +G+W + +R+ M+
Sbjct: 300 GALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSVMESK 359
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
G++K PG S+ E+ + +H F +GD HPQ + IYKK+ EL + ++ GY+P E LHD+
Sbjct: 360 GIKKLPGVSNAELGDSVHTFHIGDTSHPQSKMIYKKLSELLRRIREMGYNPEVEATLHDV 419
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
E+ +KE L++HSE+LAI + LI+T P T IR+ NLR C+DCH KLI+ I R+II+
Sbjct: 420 EEEDKEGHLSVHSEKLAIAFLLINTNPGTPIRITMNLRTCSDCHHAAKLISTIAGREIIL 479
Query: 469 RDRNRFHHFE 478
+D NR H+ +
Sbjct: 480 KDVNRIHYMK 489
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 117/280 (41%), Gaps = 55/280 (19%)
Query: 4 EIHGQVLKLGLRSNR----STRLKLVELYGKCGEFKDAMQLFDEMPE-------CNDVVA 52
E+H + ++L +R + + L + CGE A+ L + E C+ ++
Sbjct: 106 EMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVS-ALSLGKRIHEVIKRRRMCSSMLL 164
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
+++ Y G ++ A +VF + +D V WT++I R+G A+DLF +M +
Sbjct: 165 ENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGL 224
Query: 113 RPNEVTIVCVLSACSQLGALELGR-WIHSYMGKHRI--DLNHIVGGALINMYSRCGDIDK 169
P+ + V +L+ACS G L++G+ + +S + I L H ++++ R G I +
Sbjct: 225 EPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHY--ACMVDLLGRAGCIRE 282
Query: 170 ALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH 229
A M I+P + + +L AC
Sbjct: 283 AYDFIMVMP----------------------------------IKPNERVWGALLGACRI 308
Query: 230 GGLVDLGFEIFQSMTRDYGIEP-QIEHYGCIVDLLSRVGR 268
+D+G S+ R + P Q +Y + ++ +R GR
Sbjct: 309 HSNMDIGLLAADSLLR---LAPKQTGYYVLLSNIYARAGR 345
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/444 (41%), Positives = 276/444 (62%), Gaps = 2/444 (0%)
Query: 46 ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
EC V + +M++ Y + E A +F + KD V W+AM+ + G+ A + F
Sbjct: 388 ECTPTVGTALMVS-YSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFI 446
Query: 106 EMQRDNVRPNEVTIVCVLSACSQLGA-LELGRWIHSYMGKHRIDLNHIVGGALINMYSRC 164
+M ++PNE TI + AC+ A ++LGR H+ KHR V AL++MY+R
Sbjct: 447 KMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARK 506
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL 224
G I+ A VFE +RD+ ++NS+++G A HG S +A+++FR+M +GI +TF+ V+
Sbjct: 507 GSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVI 566
Query: 225 NACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPD 284
C+H GLV+ G + F M RDYGI P ++HY C+VDL SR G+ +E I M
Sbjct: 567 MGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAG 626
Query: 285 HIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAK 344
+ +LL AC++H ++LG+ A++LL DS TYVLLSN Y+++GKWKE ++R
Sbjct: 627 PTIWRALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRKL 686
Query: 345 MKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVV 404
M V+KE GCS I++ N++H FI D HP EQIY K++ + +K EGY P T V
Sbjct: 687 MDTKKVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRAMTAKLKQEGYCPDTSFV 746
Query: 405 LHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKR 464
HD+ + +KE LA+HSERLA+ +GLI+T P + + KNLRV D H+++K+++ I R
Sbjct: 747 PHDVAEDQKEAMLAMHSERLALAFGLIATPPAAPLHIFKNLRVSGDGHTVMKMVSEIEDR 806
Query: 465 KIIVRDRNRFHHFENGTCSCGDYW 488
+I++RD RFHHF++G CSCGD+W
Sbjct: 807 EIVMRDCCRFHHFKSGVCSCGDFW 830
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 140/263 (53%), Gaps = 1/263 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D+ T +++ Y+ V + +VF + ++ V WT+++ G ++ G + + LF M+
Sbjct: 90 DIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMR 149
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ V PN T VLS + G ++LG+ +H+ K V +L+NMY++CG ++
Sbjct: 150 AEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVE 209
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+A VF M+ RD+ ++N+L+AGL ++GR +EA+++F + + T+ T+ V+N C+
Sbjct: 210 EARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCA 269
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
+ + L ++ S+ + +G ++D ++ G+ ++A D M + + +
Sbjct: 270 NLKHLGLARQLHSSVLK-HGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSW 328
Query: 289 GSLLSACKIHGKLQLGEQIAKRL 311
+++ C +G + L + R+
Sbjct: 329 TAMIDGCIQNGDIPLAAALFSRM 351
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 182/454 (40%), Gaps = 93/454 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
R++H VLK G S + L++ Y K G+ A+ +F M +V
Sbjct: 277 ARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNV----------- 325
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
V WTAMIDG ++NG++ A LF M+ D V PN++T
Sbjct: 326 --------------------VSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYST 365
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+ + IH+ + K + VG AL+ YS+ ++AL +F+ + ++D
Sbjct: 366 ILT----VSEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKD 421
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC-SHGGLVDLGFE-- 238
V ++++++ A G A F +M G++P + T ++AC S VDLG +
Sbjct: 422 VVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFH 481
Query: 239 -------------IFQSMTRDYGIEPQIEHYGCIV------DLLS---------RVGRPE 270
+ ++ Y + IE+ C+ DLLS + G +
Sbjct: 482 AISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQ 541
Query: 271 EAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT------ 321
+A D M+ I D + S++ C G ++ G+Q D D G
Sbjct: 542 KALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQ----YFDLMVRDYGITPTMDH 597
Query: 322 YVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQI 381
Y + + Y+ +GK E + + M I +LG R + ++
Sbjct: 598 YACMVDLYSRAGKLDETMSLIEGMP------------FPAGPTIWRALLGACRVHKNVEL 645
Query: 382 YKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
K E +++ LE +T V+L +I +W
Sbjct: 646 GKLAAE--KLLSLEPLDSATYVLLSNIYSAAGKW 677
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 92/180 (51%), Gaps = 1/180 (0%)
Query: 47 CNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
C+ V ++N Y + GLVE A VF R++ +D V W ++ GLV NG AL LF +
Sbjct: 189 CSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHD 248
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
+ E T V++ C+ L L L R +HS + KH V AL++ Y++ G
Sbjct: 249 SRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQ 308
Query: 167 IDKALQVFEEMK-ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
+DKAL VF M ++V ++ ++I G +G A +F M G+ P +T+ +L
Sbjct: 309 LDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILT 368
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/487 (39%), Positives = 282/487 (57%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++HG V K G N L +Y KCG + +L MP
Sbjct: 203 GRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPS--------------- 247
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ V W +I G +NG LD + M+ RP+++T V
Sbjct: 248 -----------------QNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVS 290
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V+S+CS+L L G+ IH+ + K L V +LI+MYSRCG ++ +L+VF E + D
Sbjct: 291 VISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGD 350
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++S+IA HGR +EA+++F +M + + VTF+ +L ACSH GL + G + F
Sbjct: 351 VVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFD 410
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M YG++P++EHY C+VDLL R G EEA I +M + D I +LLSACKIH K
Sbjct: 411 LMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKT 470
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++ +I++ + D YVLLSN +AS +W + +R M++ ++KEPG S +EV
Sbjct: 471 EMARRISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLEV 530
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N+IH+F +GD HP+ +I ++EL +K GY P + VLHD++ +KE++L HS
Sbjct: 531 KNQIHQFCMGDKSHPKSVEIASYLRELTSEMKKRGYVPDIDSVLHDMDVEDKEYSLVHHS 590
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI + L+ T T IRV+KNLRVC+DCH IK I+ I+ R+IIVRD +RFHHF+NG
Sbjct: 591 EKLAIAFALLYTPVGTPIRVIKNLRVCSDCHVAIKYISEISNREIIVRDSSRFHHFKNGR 650
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 651 CSCGDYW 657
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 148/299 (49%), Gaps = 3/299 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H ++ G S++ L+ LY KCG+ A+ LF MP N +++ ++IN Y
Sbjct: 71 GKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKN-IMSCNILINGYF 129
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G A ++F + ++ W AM+ GL++ L LF M P+E +
Sbjct: 130 RSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGS 189
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL C+ L AL GR +H Y+ K + N +V +L +MY +CG + + ++ M ++
Sbjct: 190 VLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQN 249
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +N+LIAG A +G E ++ + M G RP K+TFV V+++CS + G +I
Sbjct: 250 VVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHA 309
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ + G + ++ + SR G E + + D + S+++A HG+
Sbjct: 310 EVIKA-GASLIVSVISSLISMYSRCGCLEYSLKVFLECENG-DVVCWSSMIAAYGFHGR 366
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 112/287 (39%), Gaps = 68/287 (23%)
Query: 85 TAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGK 144
TA L G + +A D F ++ +L +C +L LG+ +HS +
Sbjct: 25 TAEFTNLCSKGHLKQAFDRFS----SHIWSEPSLFSHLLQSCISENSLSLGKQLHSLIIT 80
Query: 145 HRIDLNHIVGGALINMYSRCGDIDKAL-------------------------------QV 173
+ + L+N+YS+CG +D A+ ++
Sbjct: 81 SGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKM 140
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS----- 228
F+EM ER+V T+N+++AGL + E + +F M G P + VL C+
Sbjct: 141 FDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRAL 200
Query: 229 ------HGGLVDLGFE----IFQSMTRDY--------------GIEPQ-IEHYGCIVDLL 263
HG + GFE + S+ Y + Q + + ++
Sbjct: 201 VAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGR 260
Query: 264 SRVGRPEEAYDFITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQI 307
++ G PEE D MK+A PD I S++S+C L G+QI
Sbjct: 261 AQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQI 307
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 46/220 (20%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G++IH +V+K G S L+ +Y +CG + ++++F E E DVV + MI Y
Sbjct: 303 QGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLEC-ENGDVVCWSSMIAAY 361
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
H G A+DLF +M+++ + N+VT +
Sbjct: 362 GFH-------------------------------GRGVEAIDLFNQMEQEKLEANDVTFL 390
Query: 121 CVLSACSQLGALELG-----RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
+L ACS G E G + Y K R L H ++++ R G +++A +
Sbjct: 391 SLLYACSHCGLKEKGIKFFDLMVEKYGVKPR--LEHYT--CMVDLLGRYGSVEEAEALIR 446
Query: 176 EMKER-DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIR 214
M + DV T+ +L++ +H ++ EM R + + R
Sbjct: 447 SMPVKADVITWKTLLSACKIHKKT----EMARRISEEVFR 482
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/455 (40%), Positives = 283/455 (62%), Gaps = 10/455 (2%)
Query: 31 CGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDG 90
CG K+ ++ +DV + +I+ + + G E+A VF + D + W ++I G
Sbjct: 135 CGIIKEGLE--------SDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGG 186
Query: 91 LVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLN 150
+N AL+LF+ M+R + T+ VL AC+ L LELG H ++ K+ DL
Sbjct: 187 FAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDL- 245
Query: 151 HIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN 210
I+ AL++MY +CG ++ A +VF +MKERDV T++++I+GLA +G S EA+++F M +
Sbjct: 246 -ILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKS 304
Query: 211 QGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE 270
G +P +T VGVL ACSH GL++ G+ F+SM + YGI P EHYGC++DLL + G+ +
Sbjct: 305 SGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLD 364
Query: 271 EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYA 330
+A + M+ PD + +LL AC++ + L E AK+++ D+GTY +LSN YA
Sbjct: 365 DAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTVLSNIYA 424
Query: 331 SSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQ 390
+S KW +IR +M++ G++KEPGCS IEVN +IH FI+GD HPQ ++ KK+ +L
Sbjct: 425 NSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAFIIGDESHPQIVEVNKKLNQLIH 484
Query: 391 IVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCND 450
+ GY P T VL D+E + E +L HSE+LA+ +GL++ IR+ KNLR+C D
Sbjct: 485 RLIGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPSEKVIRIRKNLRICGD 544
Query: 451 CHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCG 485
CH KL + + R I++RD R+HHF++G CSCG
Sbjct: 545 CHVFCKLASKLENRNIVIRDPIRYHHFQDGKCSCG 579
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 177/400 (44%), Gaps = 60/400 (15%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
V+IN YV+ L+ +A ++F ++ ++ + WT MI + +AL+L M RD VR
Sbjct: 52 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVR 111
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
PN T VL AC+ + + R +H + K ++ + V ALI+++++ G+ + AL V
Sbjct: 112 PNVYTYSSVLRACNGMSDV---RMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSV 168
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV 233
F+EM D +NS+I G A + RS A+E+F+ M G + T VL AC+ L+
Sbjct: 169 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 228
Query: 234 DLGFE---------------------------------IFQSMTRDYGIEPQIEHYGCIV 260
+LG + +F M E + + ++
Sbjct: 229 ELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDARRVFNQMK-----ERDVITWSTMI 283
Query: 261 DLLSRVGRPEEAYDFITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSA 317
L++ G +EA MK + P++I + +L AC G L+ G + +
Sbjct: 284 SGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGI 343
Query: 318 DSGT--YVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRH 375
+ G Y + + +GK +AV++ +M + EP + +LG R
Sbjct: 344 NPGREHYGCMIDLLGKAGKLDDAVKLLNEM-----ECEPDAVTWRT-------LLGACR- 390
Query: 376 PQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
QR + + K+++ L+ T VL +I ++W
Sbjct: 391 VQRNMVLAEYAA-KKVIALDPEDAGTYTVLSNIYANSQKW 429
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/442 (40%), Positives = 275/442 (62%), Gaps = 1/442 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
ND T +++ YV H V++A VFS + VKD WT M+ G RA+ F +M
Sbjct: 256 NDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKM 315
Query: 108 QR-DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
N++ + + ++ +LS+CS GAL+ GR +H+ K N VG A+I+MY+ CG+
Sbjct: 316 LGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGN 375
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
++ A + F M E+DV +N++IAG M+G +A+++F +M G+ P + TFV VL A
Sbjct: 376 LEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYA 435
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
CSH G+V G +IF M + P ++HY C++D+L R G+ + AY FI NM PD
Sbjct: 436 CSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFD 495
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
+ +LL AC+IHG ++LG +I++++ + D+G YVLLSN YA +G W+ RA ++
Sbjct: 496 VYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLR 555
Query: 347 EAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH 406
++K+PG SSIE+N EI+ F+ G+ HPQ +I ++ L +K GY P+T V+L
Sbjct: 556 SKRLKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQ 615
Query: 407 DIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKI 466
D+ D K+ L HSE++AI +GL+ TKP T IR+ KNLR CNDCHS K ++ + R +
Sbjct: 616 DVSDDMKKDILYHHSEKMAIAFGLMRTKPGTIIRITKNLRTCNDCHSASKFVSKVFGRVL 675
Query: 467 IVRDRNRFHHFENGTCSCGDYW 488
+++D NRFH F++G CSC DYW
Sbjct: 676 VIKDANRFHVFQDGVCSCRDYW 697
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 158/339 (46%), Gaps = 37/339 (10%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
++ S ++N YV GL+ +A ++F K+ V WT +I GL +N A+D+FREM
Sbjct: 54 HNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREM 113
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
N +PN VTI VL A + LG + + + +H + + + N V AL++MYS+ G +
Sbjct: 114 TMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCM 173
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A Q+FE M ER+V ++N++++G + HG S EA+++F M +G+ T + ++ A
Sbjct: 174 GVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPAS 233
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM-------- 279
G + +G I + R G E ++D+ ++A+ + M
Sbjct: 234 LSVGCLQVGTGIHGFIIRT-GYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAW 292
Query: 280 ---------------------------KIAPDHIMLGSLLSACKIHGKLQLGEQI-AKRL 311
+ D I+L +LS+C G LQ G ++ A +
Sbjct: 293 TLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAI 352
Query: 312 LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
C + + + + YA+ G ++A + M E V
Sbjct: 353 KTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDV 391
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 144/302 (47%), Gaps = 10/302 (3%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
+V T +++ Y + G + A ++F + ++ V W A++ G +G A+DLF M+
Sbjct: 156 NVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMR 215
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
R + + TI+ ++ A +G L++G IH ++ + + + + AL+++Y +D
Sbjct: 216 RKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVD 275
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN-QGIRPTKVTFVGVLNAC 227
A +VF EM +DV + ++ G + A++ F +M+ Q ++ + +G+L++C
Sbjct: 276 DAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSC 335
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SH G + G + ++ I ++D+ + G E+A F M D +
Sbjct: 336 SHSGALQQGRRV-HALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMG-EKDVVC 393
Query: 288 LGSLLSACKIHG----KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRA 343
++++ ++G + L Q+ LD D T+V + A + +G E +QI
Sbjct: 394 WNAMIAGNGMNGYGTDAIDLFLQMKGSGLD---PDESTFVSVLYACSHAGMVYEGLQIFY 450
Query: 344 KM 345
M
Sbjct: 451 HM 452
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 85/198 (42%), Gaps = 34/198 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR +H +K +N ++++Y CG +DA + F M E
Sbjct: 343 QGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGE-------------- 388
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
KD VCW AMI G NG A+DLF +M+ + P+E T V
Sbjct: 389 ------------------KDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFV 430
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGA-LINMYSRCGDIDKALQVFEEMK- 178
VL ACS G + G I +M K D+ ++ A +I++ R G +D A M
Sbjct: 431 SVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPF 490
Query: 179 ERDVTTYNSLIAGLAMHG 196
+ D Y++L+ +HG
Sbjct: 491 QPDFDVYSTLLGACRIHG 508
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 107/278 (38%), Gaps = 75/278 (26%)
Query: 138 IHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR 197
IH+ + + N + +L+N Y CG + A Q+F ++V ++ LI+GLA +
Sbjct: 43 IHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKNDC 102
Query: 198 SIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL-----------GFE-------- 238
+EA+++FREM +P VT VL A ++ GL+ + GFE
Sbjct: 103 FVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETA 162
Query: 239 ----------------IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---------- 272
+F+SM+ E + + IV S G EEA
Sbjct: 163 LVDMYSKFGCMGVARQLFESMS-----ERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRK 217
Query: 273 ---YDFITNMKIAPDHIMLGSLLSACKIHGKL-----QLGEQIAKRLLDCRSA------- 317
DF T M + P + +G L IHG + + + I L+D +
Sbjct: 218 GLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDA 277
Query: 318 ----------DSGTYVLLSNAYASSGKWKEAVQIRAKM 345
D + L+ ++S W A++ KM
Sbjct: 278 HRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKM 315
>gi|7362769|emb|CAB83139.1| putative protein [Arabidopsis thaliana]
Length = 558
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/458 (40%), Positives = 290/458 (63%), Gaps = 19/458 (4%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ H Q+L GL + R L+ +Y CG+ + A ++FD+ D+ A ++N Y
Sbjct: 81 GQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDD-SGSKDLPAWNSVVNAYA 139
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN-----VRPNE 116
+ GL+++A ++F + ++ + W+ +I+G V G+ ALDLFREMQ VRPNE
Sbjct: 140 KAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNE 199
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
T+ VLSAC +LGALE G+W+H+Y+ K+ ++++ ++G ALI+MY++CG +++A +VF
Sbjct: 200 FTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNA 259
Query: 177 M-KERDVTTYNSLIAGLAMHGRSIEAVEMFREMI-NQGIRPTKVTFVGVLNACSHGGLVD 234
+ ++DV Y+++I LAM+G + E ++F EM + I P VTFVG+L AC H GL++
Sbjct: 260 LGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLIN 319
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
G F+ M ++GI P I+HYGC+VDL R G +EA FI +M + PD ++ GSLLS
Sbjct: 320 EGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Query: 295 CKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
++ G ++ E KRL++ +SG YVLLSN YA +G+W E G+ K P
Sbjct: 380 SRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWME-----------GINKVP 428
Query: 355 GCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKE 414
GCS +EV +HEF++GD + E+IY + E+ Q ++ GY T+ VL D+ + +KE
Sbjct: 429 GCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKE 488
Query: 415 WALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCH 452
AL+ HSE+LAI + L+ T+P T +R++KNLR+C DCH
Sbjct: 489 IALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCH 526
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 134/342 (39%), Gaps = 76/342 (22%)
Query: 80 DTVCWTAMIDGLVRN---GEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGR 136
++ W +I +V N + + ++ M+ V P+ T +L + L LG+
Sbjct: 23 ESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQ 82
Query: 137 WIHSYMGKHRIDLNHIVGGALINMYSRCGD------------------------------ 166
H+ + +D + V +L+NMYS CGD
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 167 -IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM----INQG-IRPTKVTF 220
ID A ++F+EM ER+V +++ LI G M G+ EA+++FREM N+ +RP + T
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 221 VGVLNACSHGGLVDLG-------------------------------FEIFQSMTRDYGI 249
VL+AC G ++ G E + + G
Sbjct: 203 STVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGS 262
Query: 250 EPQIEHYGCIVDLLSRVGRPEEAYDFITNM----KIAPDHIMLGSLLSACKIHGKLQLGE 305
+ ++ Y ++ L+ G +E + + M I P+ + +L AC G + G+
Sbjct: 263 KKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGK 322
Query: 306 QIAKRLLDCRSADSGT--YVLLSNAYASSGKWKEAVQIRAKM 345
K +++ Y + + Y SG KEA A M
Sbjct: 323 SYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASM 364
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 36/200 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ +H + K + + L+++Y KCG + A ++F+ + DV A + MI C
Sbjct: 217 QGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCL 276
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+GL + F++FS + DN+ PN VT V
Sbjct: 277 AMYGLTDECFQLFSEMTTS------------------------------DNINPNSVTFV 306
Query: 121 CVLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+L AC G + G+ M + + H G ++++Y R G I +A M
Sbjct: 307 GILGACVHRGLINEGKSYFKMMIEEFGITPSIQHY--GCMVDLYGRSGLIKEAESFIASM 364
Query: 178 K-ERDVTTYNSLIAGLAMHG 196
E DV + SL++G M G
Sbjct: 365 PMEPDVLIWGSLLSGSRMLG 384
>gi|220061995|gb|ACL79585.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
Length = 589
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/493 (40%), Positives = 285/493 (57%), Gaps = 45/493 (9%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
++H VL+LG+ ++ L++ Y KCG+ A ++FDEM
Sbjct: 134 QLHALVLRLGVAADVRLLTTLLDSYAKCGDLASARKVFDEM------------------- 174
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR------DNVRPNEV 117
V+D W +++ GL + E AL LF + PNEV
Sbjct: 175 -------------TVRDVATWNSLLAGLAQGTEPNLALALFHRLANSFQELPSREEPNEV 221
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
TIV VLSAC+Q+G L+ G ++H + K +D N V +LI+MYS+CG + +AL VF +
Sbjct: 222 TIVAVLSACAQIGLLKDGMYVHEFAKKFGLDRNVRVCNSLIDMYSKCGSLSRALDVFHSI 281
Query: 178 KERDVT--TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
K D T +YN+ I +MHG +A+ +F EM + I P VT++ VL C+H GLVD
Sbjct: 282 KPEDRTLVSYNAAIQAHSMHGHGGDALRLFDEMPTR-IEPDGVTYLAVLCGCNHSGLVDD 340
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G +F SM + P ++HYG IVDLL R GR EAYD + +M D ++ +LL A
Sbjct: 341 GLRVFNSMR----VAPNMKHYGTIVDLLGRAGRLTEAYDTVISMPFPADIVLWQTLLGAA 396
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
K+HG ++L E A +L + S G YVLLSN YAS +W + ++R M+ V+K PG
Sbjct: 397 KMHGVVELAELAANKLAELGSNVDGDYVLLSNVYASKARWMDVGRVRDTMRSNDVRKVPG 456
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
S E++ +H+FI GD HP+ ++IY+ ++++ + GY P T VLHDI + EK++
Sbjct: 457 FSYTEIDGVMHKFINGDKEHPRWQEIYRALEDIVSRISELGYEPETSNVLHDIGEEEKQY 516
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
AL HSE+LAI +GLI+T P T+RV+KNLR+C DCH + KLI+ R I++RDR RFH
Sbjct: 517 ALCYHSEKLAIAFGLIATPPGETLRVIKNLRICGDCHVVAKLISKAYGRVIVIRDRARFH 576
Query: 476 HFENGTCSCGDYW 488
FE+G CSC DYW
Sbjct: 577 RFEDGQCSCRDYW 589
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 78/198 (39%), Gaps = 37/198 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEM-PECNDVVASTVMINC 59
+G +H K GL N L+++Y KCG A+ +F + PE +V+ I
Sbjct: 238 DGMYVHEFAKKFGLDRNVRVCNSLIDMYSKCGSLSRALDVFHSIKPEDRTLVSYNAAIQA 297
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
+ HG G+ AL LF EM + P+ VT
Sbjct: 298 HSMHG----------------------------HGGD---ALRLFDEMP-TRIEPDGVTY 325
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
+ VL C+ G ++ G + + M R+ N G ++++ R G + +A M
Sbjct: 326 LAVLCGCNHSGLVDDGLRVFNSM---RVAPNMKHYGTIVDLLGRAGRLTEAYDTVISMPF 382
Query: 179 ERDVTTYNSLIAGLAMHG 196
D+ + +L+ MHG
Sbjct: 383 PADIVLWQTLLGAAKMHG 400
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/419 (43%), Positives = 279/419 (66%), Gaps = 1/419 (0%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+++ Y G V +A++VF ++ KD V W ++I+G NG+ AL L+ EM ++P+
Sbjct: 162 LLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPD 221
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
TIV +LSAC+++GAL LG+ +H YM K + N L+++Y+RCG +++A +F+
Sbjct: 222 GFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFD 281
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM-INQGIRPTKVTFVGVLNACSHGGLVD 234
EM +++ ++ SLI GLA++G EA+E+F+ M +G+ P ++TFVG+L ACSH G+V
Sbjct: 282 EMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVK 341
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
GFE F+ M +Y IEP+IEH+GC+VDLL+R G+ ++AY++I +M + P+ ++ +LL A
Sbjct: 342 EGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGA 401
Query: 295 CKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
C +HG L E ++L SG YVLLSN YAS +W + +IR +M GV+K P
Sbjct: 402 CTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVP 461
Query: 355 GCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKE 414
G S +EV N +HEF++GD HPQ + IY K++E+ ++ EGY P V D+E+ EKE
Sbjct: 462 GHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKE 521
Query: 415 WALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNR 473
A+ HSE++AI + LIST + I VVKNLRVC DCH IKL++ + R+I+VRDR+R
Sbjct: 522 NAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSR 580
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 123/233 (52%), Gaps = 4/233 (1%)
Query: 69 AFEVFSRV-KVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN-VRPNEVTIVCVLSAC 126
A +VFS++ K + W +I G G A L+REM+ V P+ T ++ A
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 127 SQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYN 186
+ + + LG IHS + + V +L+++Y+ CGD+ A +VF++M E+D+ +N
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 187 SLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRD 246
S+I G A +G+ EA+ ++ EM ++GI+P T V +L+AC+ G + LG + M +
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK- 250
Query: 247 YGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
G+ + ++DL +R GR EEA M + + + SL+ ++G
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNG 302
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 43/204 (21%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H ++K+GL N + L++LY +CG ++A LFDEM +
Sbjct: 241 GKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD--------------- 285
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR-DNVRPNEVTIV 120
K++V WT++I GL NG A++LF+ M+ + + P E+T V
Sbjct: 286 -----------------KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFV 328
Query: 121 CVLSACSQLGALELG-----RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
+L ACS G ++ G R Y + RI+ H G ++++ +R G + KA + +
Sbjct: 329 GILYACSHCGMVKEGFEYFRRMREEYKIEPRIE--HF--GCMVDLLARAGQVKKAYEYIK 384
Query: 176 EMK-ERDVTTYNSLIAGLAMHGRS 198
M + +V + +L+ +HG S
Sbjct: 385 SMPMQPNVVIWRTLLGACTVHGDS 408
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/443 (41%), Positives = 271/443 (61%), Gaps = 6/443 (1%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+DV I Y++ G V A ++F + VK + W AM+ G +NG L+L+R M
Sbjct: 176 SDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNM 235
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ V P+ VT+V VLS+C+ LGA +G + M N + ALINMY+RCG++
Sbjct: 236 DMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNL 295
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
KA VF+ M ER + ++ ++I G MHG AV++F+EMI GI P FV VL+AC
Sbjct: 296 TKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSAC 355
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SH GL D G E F+ M R+Y +EP EHY C+VDLL R GR +EA I +M I PD +
Sbjct: 356 SHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAV 415
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
G+LL ACKIH ++L E +R+++ + G YVLLSN Y+++ K ++IR MKE
Sbjct: 416 WGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKE 475
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
++K+PGCS +E+ +H FI+GD H Q ++IY+ ++EL+ I+ E P + +
Sbjct: 476 KKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKD----N 531
Query: 408 IEDWEKE--WALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRK 465
E+ K+ + +HSE+LA+ +GL++T + ++KNLR+C DCH K+++ I R+
Sbjct: 532 REESNKDGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQ 591
Query: 466 IIVRDRNRFHHFENGTCSCGDYW 488
+ VRD RFHHF NG+CSC DYW
Sbjct: 592 LTVRDATRFHHFRNGSCSCKDYW 614
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 163/308 (52%), Gaps = 12/308 (3%)
Query: 54 TVMINCYVEHGLVENAFEVFSRV--KVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN 111
T +I+ Y + LV+NA +VF K TVC+ A++ G V N + + A+ LFR+M +
Sbjct: 79 TGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEG 138
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
V N VT++ ++ AC LELG +H K+ D + V I MY +CG ++ A
Sbjct: 139 VPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQ 198
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
++F+EM + + ++N++++G A +G + +E++R M G+ P VT VGVL++C++ G
Sbjct: 199 KLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLG 258
Query: 232 LVDLGFEI-FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLG- 289
+G E+ F+ + P + + ++++ +R G +A M P+ ++
Sbjct: 259 AQSVGHEVEFKMQASGFTSNPFLNN--ALINMYARCGNLTKAQAVFDGM---PERTLVSW 313
Query: 290 -SLLSACKIHGKLQLGEQIAKRLLDCRSADSGT-YVLLSNAYASSGKWKEAVQIRAKMKE 347
+++ +HG ++ Q+ K ++ GT +V + +A + +G + ++ KM +
Sbjct: 314 TAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEY-FKMMK 372
Query: 348 AGVQKEPG 355
Q EPG
Sbjct: 373 RNYQLEPG 380
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 121/302 (40%), Gaps = 40/302 (13%)
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W + L + + +AL L+ +M R RPN T L +C+ L LG H +
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEE-MKERDVTT-YNSLIAGLAMHGRSIEA 201
K V LI+MY + +D A +VFEE R +T YN+L++G + + +A
Sbjct: 68 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127
Query: 202 VEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVD 261
V +FR+M +G+ VT +G++ AC ++LG + S T YG + + C +
Sbjct: 128 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCS-TLKYGFDSDVSVVNCFIT 186
Query: 262 LLSRVGRPEEAYDFITNMKIA----------------------------------PDHIM 287
+ + G A M + PD +
Sbjct: 187 MYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVT 246
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV--LLSNAYASSGKWKEAVQIRAKM 345
L +LS+C G +G ++ + + S ++ L N YA G +A + M
Sbjct: 247 LVGVLSSCANLGAQSVGHEVEFK-MQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGM 305
Query: 346 KE 347
E
Sbjct: 306 PE 307
>gi|357124741|ref|XP_003564056.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Brachypodium distachyon]
Length = 594
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/449 (43%), Positives = 278/449 (61%), Gaps = 15/449 (3%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLF---- 104
DV T +++ Y + G + +A +VF + V+D W A++ GL + E AL LF
Sbjct: 152 DVRLITTLVDSYAKCGDLASARKVFDEMVVRDVASWNALLAGLAQGTEPTLALALFHRLV 211
Query: 105 ---REMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMY 161
RE+ PNEVTIV LSAC+Q+G+L+ G ++H + K ++ N V ALI+MY
Sbjct: 212 GSFRELPPRE-EPNEVTIVAALSACAQIGSLQDGLYVHEFARKIGVNGNVRVCNALIDMY 270
Query: 162 SRCGDIDKALQVFEEMKERDVT--TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVT 219
S+CG +D AL+VF +K D T +YN+ I ++MHG +A+ +F EM I P +VT
Sbjct: 271 SKCGSLDLALEVFHSIKREDRTLVSYNTAIQAVSMHGHGGDALRLFDEM-PTFIEPDEVT 329
Query: 220 FVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM 279
++ VL C+H GLVD G +F SM + P ++HYG +VDLL R GR EAYD I +M
Sbjct: 330 YIAVLCGCNHAGLVDDGLRVFHSMR----VLPNVKHYGAVVDLLGRAGRLAEAYDTIVSM 385
Query: 280 KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAV 339
D ++ +LL A K HG ++L E A +L + S G YVLLSN YAS +W +
Sbjct: 386 PFPADIVLWQTLLGAAKTHGDVELAELAATKLDELGSNVDGDYVLLSNVYASKARWADVR 445
Query: 340 QIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSP 399
++R M+ V+K PG S E++ +H+FI GD HP+ ++IY+ ++E+ + GY P
Sbjct: 446 RVRDTMRSNDVRKVPGFSYTEISGVMHKFINGDKEHPRWQEIYRALEEIVSRIGELGYEP 505
Query: 400 STEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIA 459
T VLHDI + EK++AL+ HSE+LAI +GLI+T P T+RV+KNLR C DCH + KLI+
Sbjct: 506 ETSNVLHDIGEEEKQYALSYHSEKLAIAFGLIATPPGETLRVIKNLRTCGDCHVVAKLIS 565
Query: 460 NITKRKIIVRDRNRFHHFENGTCSCGDYW 488
R II+RDR RFH FE+G CSC DYW
Sbjct: 566 KAYGRVIIIRDRARFHQFEDGQCSCKDYW 594
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 84/208 (40%), Gaps = 42/208 (20%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G +H K+G+ N L+++Y KCG
Sbjct: 243 DGLYVHEFARKIGVNGNVRVCNALIDMYSKCGS--------------------------- 275
Query: 61 VEHGLVENAFEVFSRVKVKD--TVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVT 118
++ A EVF +K +D V + I + +G AL LF EM + P+EVT
Sbjct: 276 -----LDLALEVFHSIKREDRTLVSYNTAIQAVSMHGHGGDALRLFDEMP-TFIEPDEVT 329
Query: 119 IVCVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+ VL C+ G ++ G R HS R+ N GA++++ R G + +A M
Sbjct: 330 YIAVLCGCNHAGLVDDGLRVFHSM----RVLPNVKHYGAVVDLLGRAGRLAEAYDTIVSM 385
Query: 178 K-ERDVTTYNSLIAGLAMHGRSIEAVEM 204
D+ + +L+ HG +E E+
Sbjct: 386 PFPADIVLWQTLLGAAKTHG-DVELAEL 412
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/440 (40%), Positives = 272/440 (61%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D+ ++N Y G E AF +F ++ KD + W +I G ++ +AL +F +M
Sbjct: 481 DISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMG 540
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ + N T + +SA + L ++ G+ +H K V ALI++Y +CG I+
Sbjct: 541 QAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIE 600
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +F EM R+ ++N++I + HGR +EA+++F +M +G++P VTF+GVL ACS
Sbjct: 601 DAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACS 660
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLV+ G F+SM+ YG+ P +HY C+VD+L R G+ + A F+ M I + ++
Sbjct: 661 HVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIW 720
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+LLSACK+H +++GE AK LL+ DS +YVLLSNAYA +GKW Q+R MK+
Sbjct: 721 RTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDR 780
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
G++KEPG S IEV N +H F +GD HP +QIYK + EL + GY + H+
Sbjct: 781 GIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENPNLFHEK 840
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
E +K+ +HSE+LA+ +GL++ P +RV+KNLRVC+DCHS +K + +T+R+I++
Sbjct: 841 EQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMKCTSEVTRREIVL 900
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD RFHHF +G+CSCGDYW
Sbjct: 901 RDVYRFHHFNSGSCSCGDYW 920
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 175/382 (45%), Gaps = 47/382 (12%)
Query: 14 LRSNRSTRLKLVELYGKCGEFKDAMQLFDEM------PEC-------------------- 47
L +R T L+ + +CG + A+Q+FDEM P+C
Sbjct: 206 LFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGK 265
Query: 48 ------------NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNG 95
D + +++ YV+ G +E A ++F+ + V W M+ +
Sbjct: 266 QLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQIS 325
Query: 96 EMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGG 155
++A++ ++F +MQ + PN+ T C+L C+ G +ELG IHS K+ + + V G
Sbjct: 326 DLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSG 385
Query: 156 ALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRP 215
LI+MYS+ G +DKA ++ E +++RDV ++ S+IAG H EA+ F+EM + G+ P
Sbjct: 386 VLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWP 445
Query: 216 TKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDF 275
+ +AC+ + G +I + G I + +V+L +R GR EEA+
Sbjct: 446 DNIGLASAASACAGIKAMRQGLQI-HARVYVSGYAADISIWNTLVNLYARCGRSEEAFSL 504
Query: 276 ITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG----TYVLLSNAYAS 331
++ D I L+S G+ +L +Q + A + T++ +A A+
Sbjct: 505 FREIE-HKDEITWNGLISG---FGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALAN 560
Query: 332 SGKWKEAVQIRAKMKEAGVQKE 353
K+ Q+ + + G E
Sbjct: 561 LADIKQGKQVHGRAVKTGHTSE 582
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 167/376 (44%), Gaps = 68/376 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR IH QV K S L+ LY G FK A ++F +M C
Sbjct: 162 QGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFC------------- 208
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
D V + +I G + G AL +F EMQ +RP+ VT+
Sbjct: 209 -------------------DRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVA 249
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L+AC+ +G L+ G+ +HSY+ K + ++I G+L+++Y +CGDI+ A +F
Sbjct: 250 SLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRT 309
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+V +N ++ ++ E+F +M GI P + T+ +L C+ G ++LG +I
Sbjct: 310 NVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQI- 368
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA------------------------YDF- 275
S++ G E + G ++D+ S+ G ++A +DF
Sbjct: 369 HSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFC 428
Query: 276 ---------ITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL-LDCRSADSGTYVLL 325
+ + + PD+I L S SAC ++ G QI R+ + +AD + L
Sbjct: 429 EEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTL 488
Query: 326 SNAYASSGKWKEAVQI 341
N YA G+ +EA +
Sbjct: 489 VNLYARCGRSEEAFSL 504
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 132/298 (44%), Gaps = 45/298 (15%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D + ++I+ Y ++GLV A +VF + +D V W AM+ G ++G A L+ +M
Sbjct: 77 DRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMH 136
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
V P + VLSAC++ GR IH+ + K VG ALI +Y G
Sbjct: 137 WTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFK 196
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +VF +M D T+N+LI+G A G A+++F EM G+RP VT +L AC+
Sbjct: 197 LAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACA 256
Query: 229 HGGLVDLGFEIFQ-----SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFI-----TN 278
G + G ++ M+ DY E G ++DL + G E A+D TN
Sbjct: 257 SVGDLQKGKQLHSYLLKAGMSFDYITE------GSLLDLYVKCGDIETAHDIFNLGDRTN 310
Query: 279 M-----------------------------KIAPDHIMLGSLLSACKIHGKLQLGEQI 307
+ I P+ +L C G+++LGEQI
Sbjct: 311 VVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQI 368
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 37/207 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+++HG+ +K G S L+ LYGKCG +DA +F EM N+V +T++ +C
Sbjct: 566 QGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSC- 624
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++G ALDLF +M+++ ++PN+VT +
Sbjct: 625 -------------------------------SQHGRGLEALDLFDQMKQEGLKPNDVTFI 653
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG--GALINMYSRCGDIDKALQVFEEMK 178
VL+ACS +G +E G M + LN I ++++ R G +D+A + +EM
Sbjct: 654 GVLAACSHVGLVEEGLSYFKSM-SNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMP 712
Query: 179 -ERDVTTYNSLIAGLAMHGRSIEAVEM 204
+ + +L++ +H ++IE E+
Sbjct: 713 ITANAMIWRTLLSACKVH-KNIEIGEL 738
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 98/232 (42%), Gaps = 42/232 (18%)
Query: 119 IVCVLSACSQLGALELGRW-----IHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
+ C L AC G RW IH+ + + ++G LI++Y++ G + +A QV
Sbjct: 45 LTCALQACRGRG----NRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQV 100
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV 233
F+E+ RD ++ ++++G A G EA ++ +M + PT VL+AC+ G L
Sbjct: 101 FKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLF 160
Query: 234 DLGFEIFQSMTRD------------------YGIEPQIEHYGCIVDLLSRV--------- 266
G I + + +G E C + RV
Sbjct: 161 AQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGH 220
Query: 267 ---GRPEEAYDFITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
G E A M+++ PD + + SLL+AC G LQ G+Q+ LL
Sbjct: 221 AQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLL 272
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/491 (39%), Positives = 297/491 (60%), Gaps = 38/491 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G++IH VLK + ++ + L+ YGKCG+
Sbjct: 611 GKQIHALVLKRNVAADTAIENALLACYGKCGDM--------------------------- 643
Query: 62 EHGLVENAFEVFSRVKVK-DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G EN +FSR+ + D V W +MI G + N + +A+D+ M + R + T
Sbjct: 644 --GYCEN---IFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFA 698
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLSAC+ + LE G +H + ++ + ++G AL++MY++CG ID A + FE M R
Sbjct: 699 TVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPAR 758
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
++ ++NS+I+G A HG +++++F +M QG P VTFVGVL+ACSH GLV+ GF F
Sbjct: 759 NLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHF 818
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA-CKIHG 299
SM+ YG+ P++EH+ C+VDLL RVG + DF+ M + P+ ++ ++L A C+ +G
Sbjct: 819 DSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRTVLGACCRANG 878
Query: 300 K-LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
+ LG + A+ LL+ ++ Y+LLSN YAS GKW + + R M++A V+KE GCS
Sbjct: 879 RNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSW 938
Query: 359 IEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALA 418
+ + + +H F+ GD HP+++ IY+K++EL ++L GY P T L+D+E KE L+
Sbjct: 939 VTMKDGVHVFVAGDKSHPEKDLIYEKLKELNGKMRLAGYIPETRFALYDLEGESKEELLS 998
Query: 419 IHSERLAICYGLISTKPY-TTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE++A+ + L T+P IR++KNLRVC DCHS K I+ I +R+I++RD NRFHHF
Sbjct: 999 YHSEKIAVAFVL--TRPSKMPIRILKNLRVCGDCHSAFKYISQIVERQIVLRDSNRFHHF 1056
Query: 478 ENGTCSCGDYW 488
ENG CSCGD+W
Sbjct: 1057 ENGKCSCGDFW 1067
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 129/248 (52%), Gaps = 5/248 (2%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+IN Y + G + +A VF + KD+V W +MI GL +N + A+ F+EM+R + P+
Sbjct: 430 LINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPS 489
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
T++ LS+C+ LG + +G +H K +DL+ V AL+ +Y CG + + + F
Sbjct: 490 NFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFS 549
Query: 176 EMKERDVTTYNSLIAGLAMHGRS-IEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
M + D ++NSLI LA S +EAVE F M+ G P +VTF+ +L A S L +
Sbjct: 550 LMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHE 609
Query: 235 LGFEIFQ-SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLS 293
LG +I + R+ + IE+ ++ + G + + M D + S++S
Sbjct: 610 LGKQIHALVLKRNVAADTAIEN--ALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMIS 667
Query: 294 ACKIHGKL 301
IH +L
Sbjct: 668 G-YIHNEL 674
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 145/299 (48%), Gaps = 17/299 (5%)
Query: 8 QVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPE-------CNDVVASTVMINCY 60
+V+ GL+ N T L+ C + L +++ +D+ + +++ +
Sbjct: 272 EVMGDGLKPNEYTFGSLIS--ATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGF 329
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ G + A +F ++ ++ V +I GLVR A++LF EM +D+V N + +
Sbjct: 330 AKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEM-KDSVELNPNSYM 388
Query: 121 CVLSACSQLGALELGRW----IHSYMGKHRIDLNHI-VGGALINMYSRCGDIDKALQVFE 175
+L+A + LE G+ +H+++ + + I +G LINMY++CG I+ A VF
Sbjct: 389 IILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFR 448
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
M +D T+NS+I GL + + +EAV+ F+EM + P+ T + L++C+ G + +
Sbjct: 449 LMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISV 508
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
G E G++ + ++ L G +E + M + DH+ SL+ A
Sbjct: 509 G-EQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLM-LDYDHVSWNSLIGA 565
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 110/220 (50%), Gaps = 16/220 (7%)
Query: 30 KCGEFKDA----MQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWT 85
CG KDA +QLF ND+ +IN Y G + + +VF + +++ V W+
Sbjct: 86 SCGS-KDAEELHLQLFKN-GFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWS 143
Query: 86 AMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLG--ALELGRWIHSYMG 143
+I G RN A +LFR+M D PN V+ AC + G L+ G IH M
Sbjct: 144 CLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMS 203
Query: 144 KHRIDLNHIVGGALINMYSRC-GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAV 202
K + + LI+MY G +D A + F+ + R++ + NS+I+ G ++ A
Sbjct: 204 KTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAF 263
Query: 203 EMF----REMINQGIRPTKVTFVGVLNA-CS--HGGLVDL 235
++F +E++ G++P + TF +++A CS + GLV L
Sbjct: 264 DIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLL 303
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 125/293 (42%), Gaps = 60/293 (20%)
Query: 157 LINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPT 216
LIN+Y+R GD+ +VF+EM R++ +++ LI+G + EA E+FR+M++ G P
Sbjct: 114 LINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRMPNEACELFRKMVSDGFMPN 173
Query: 217 KVTFVGVLNACSHGGLVDL--GFEIFQSMTR------------------------DYG-- 248
F V+ AC G L G +I M++ DY
Sbjct: 174 HYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARR 233
Query: 249 ----IEPQ-IEHYGCIVDLLSRVGRPEEAYDFITNMK-------IAPDHIMLGSLLSA-C 295
I P+ + ++ + + G A+D + M+ + P+ GSL+SA C
Sbjct: 234 AFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATC 293
Query: 296 KI-HGKLQLGEQIAKRLLDCRSADSGTYV--LLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
+ + L L EQ+ R ++ YV L + +A +G A I KM V
Sbjct: 294 SLANSGLVLLEQLLTR-VEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVS 352
Query: 353 EPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVL 405
G I+G +R + E+ + E+K V+L +P++ +++
Sbjct: 353 LNG------------LIIGLVRQKRGEEAVELFMEMKDSVEL---NPNSYMII 390
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/461 (40%), Positives = 294/461 (63%), Gaps = 5/461 (1%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQL---FDEMPECNDVVASTVMI 57
E E+ ++K +R + ST + +V + G + Q+ D+ +++ +I
Sbjct: 206 EALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALI 265
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y + G +E A +F + KD + W +I G AL LF+EM R PN+V
Sbjct: 266 DLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDV 325
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHI--VGGALINMYSRCGDIDKALQVFE 175
T++ +L AC+ LGA+++GRWIH Y+ K + + + +LI+MY++CGDI+ A QVF
Sbjct: 326 TMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFN 385
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
+ + ++++N++I G AMHGR+ + ++F M GI P +TFVG+L+ACSH G++DL
Sbjct: 386 SILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDL 445
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G IF+SMT+DY + P++EHYGC++DLL G +EA + I M++ PD ++ SLL AC
Sbjct: 446 GRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKAC 505
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
K+HG ++LGE A+ L+ + G+YVLLSN YA++G+W E RA + + G++K PG
Sbjct: 506 KMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVANTRALLNDKGMKKVPG 565
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
CSSIE+++ +HEFI+GD HP+ +IY ++E++ +++ G+ P T VL ++E+ KE
Sbjct: 566 CSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEG 625
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIK 456
AL HSE+LAI +GLISTKP T + +VKNLRVC +CH K
Sbjct: 626 ALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEAYK 666
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/351 (33%), Positives = 184/351 (52%), Gaps = 46/351 (13%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG++IHG VLKLG + L+ +Y + G +DA ++FDE P DVV+ T +I Y
Sbjct: 109 EGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPH-RDVVSYTALIKGY 167
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G +ENA ++F + VKD V W AMI G G AL+LF++M + NVRP+E T+V
Sbjct: 168 ASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMV 227
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+SAC+Q G++ELGR +HS++ H N + ALI++YS+CG+++ A +FE + +
Sbjct: 228 TVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYK 287
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG---- 236
DV ++N+LI G EA+ +F+EM+ G P VT + +L AC+H G +D+G
Sbjct: 288 DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH 347
Query: 237 ---------------------------------FEIFQSMTRDYGIEPQIEHYGCIVDLL 263
++F S+ + + + ++
Sbjct: 348 VYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSI-----LHKSLSSWNAMIFGF 402
Query: 264 SRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
+ GR + ++D + M+ I PD I LLSAC G L LG I + +
Sbjct: 403 AMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 453
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 166/408 (40%), Gaps = 100/408 (24%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
R IH Q++K GL + KL+E F FD +P
Sbjct: 7 RMIHAQMIKTGLHNTNYALSKLIE-------FCILSPHFDGLPY---------------- 43
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
A VF ++ + + W M G + + AL L+ M + PN T +
Sbjct: 44 ------AISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFL 97
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L +C++ A + G+ IH ++ K DL+ V +LI+MY + G ++ A +VF+E RDV
Sbjct: 98 LKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDV 157
Query: 183 TTY-------------------------------NSLIAGLAMHGRSIEAVEMFREMINQ 211
+Y N++I+G A G EA+E+F++M+
Sbjct: 158 VSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 217
Query: 212 GIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEE 271
+RP + T V V++AC+ G ++LG ++ S D+G ++ ++DL S+ G E
Sbjct: 218 NVRPDESTMVTVVSACAQSGSIELGRQV-HSWIDDHGFGSNLKIVNALIDLYSKCGELET 276
Query: 272 AYDFI------------------TNMKI----------------APDHIMLGSLLSACKI 297
A T+M + P+ + + S+L AC
Sbjct: 277 ACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAH 336
Query: 298 HGKLQLGE----QIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQI 341
G + +G I KRL +A S L+ + YA G + A Q+
Sbjct: 337 LGAIDIGRWIHVYIDKRLKGVANASSLRTSLI-DMYAKCGDIEAAHQV 383
>gi|302824741|ref|XP_002994011.1| hypothetical protein SELMODRAFT_137997 [Selaginella moellendorffii]
gi|300138173|gb|EFJ04951.1| hypothetical protein SELMODRAFT_137997 [Selaginella moellendorffii]
Length = 434
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/434 (42%), Positives = 271/434 (62%), Gaps = 1/434 (0%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
MI Y HG + +A F +++ W AMI G +NG AL LFR M + R +
Sbjct: 1 MIAAYARHGRMIHAKTTFDAAPRRNSSSWNAMIAGYAQNGHCKAALHLFRAMNNEGQRCD 60
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
VT V + AC+ L AL GR +HS + + + A++NMY++CG++D A VF
Sbjct: 61 MVTFVAAIDACAGLSALVAGRSLHSIAAAAGLVAHVEISTAIVNMYAKCGNLDDATIVFS 120
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
++ +++ +++++I +G + A++ F M G+ P VTF +L+ACSH GL +
Sbjct: 121 SIRNKNLISWSTMITAFVQNGHTDRALDAFLAMNVDGLFPDAVTFKSILSACSHAGLFEH 180
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
GF F + D+GI P ++H+ C+VDLL R GR EA + + M PD + +LL+AC
Sbjct: 181 GFFHFDLLVHDFGITPTMDHFKCMVDLLGRSGRLLEAEELVQTMPFVPDDVTWNTLLAAC 240
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
++H ++ G++ A+ LL+ S G YVLLSN +A++G E ++R M+ GV+K+PG
Sbjct: 241 RVHKSVERGKRAAEVLLELTSEIPGYYVLLSNIHAAAGDHAEKAKVRDLMEARGVRKKPG 300
Query: 356 CSSIEVNNEIHEFILGD-IRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKE 414
S+IE+N+ HEF G+ +HP+++QI ++++ L ++K +GY P T VL + + EKE
Sbjct: 301 WSTIEINDRFHEFTAGEKFQHPKKQQILEELKRLSVLMKEDGYVPDTTEVLRLVNEDEKE 360
Query: 415 WALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRF 474
L HSE+LAI GLIST P TT+RVVKNLRVC+DCHS K I+ IT RKIIVRD NRF
Sbjct: 361 SLLFFHSEKLAIACGLISTPPGTTLRVVKNLRVCSDCHSATKFISKITGRKIIVRDLNRF 420
Query: 475 HHFENGTCSCGDYW 488
HH ENG CSCGDYW
Sbjct: 421 HHTENGVCSCGDYW 434
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
ST ++N Y + G +++A VFS ++ K+ + W+ MI V+NG RALD F M D +
Sbjct: 99 STAIVNMYAKCGNLDDATIVFSSIRNKNLISWSTMITAFVQNGHTDRALDAFLAMNVDGL 158
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG--GALINMYSRCGDIDKA 170
P+ VT +LSACS G E G + H + H + + ++++ R G + +A
Sbjct: 159 FPDAVTFKSILSACSHAGLFEHG-FFHFDLLVHDFGITPTMDHFKCMVDLLGRSGRLLEA 217
Query: 171 LQVFEEMK-ERDVTTYNSLIAGLAMHGRSIE----AVEMFREMINQ 211
++ + M D T+N+L+A +H +S+E A E+ E+ ++
Sbjct: 218 EELVQTMPFVPDDVTWNTLLAACRVH-KSVERGKRAAEVLLELTSE 262
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/482 (39%), Positives = 287/482 (59%), Gaps = 14/482 (2%)
Query: 8 QVLKLGLRSNRST-----RLKLVELYGKCGEFKDAMQLFDEMPEC---NDVVASTVMINC 59
Q+L+ G N T + E G CG QL +C ++V + +++
Sbjct: 151 QMLRFGYSPNEFTLSSVIKAAAAERRGCCGH-----QLHGFCVKCGFDSNVHVGSALLDL 205
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
Y +GL+++A VF ++ ++ V W A+I G R +AL+LF+ M RD RP+ +
Sbjct: 206 YTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSY 265
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+ ACS G LE G+W+H+YM K L G L++MY++ G I A ++F+ + +
Sbjct: 266 ASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAK 325
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
RDV ++NSL+ A HG EAV F EM GIRP +++F+ VL ACSH GL+D G+
Sbjct: 326 RDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHY 385
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
++ M +D GI P+ HY +VDLL R G A FI M I P + +LL+AC++H
Sbjct: 386 YELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHK 444
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+LG A+ + + D G +V+L N YAS G+W +A ++R KMKE+GV+KEP CS +
Sbjct: 445 NTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWV 504
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E+ N IH F+ D RHPQRE+I +K +E+ +K GY P T V+ ++ E+E L
Sbjct: 505 EIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQY 564
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE++A+ + L++T P +TI + KN+RVC DCH+ IKL + + R+IIVRD NRFHHF++
Sbjct: 565 HSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKD 624
Query: 480 GT 481
+
Sbjct: 625 AS 626
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 142/304 (46%), Gaps = 36/304 (11%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D+V ++N Y + G +E A +VF ++ +D V WT +I G ++ AL F +M
Sbjct: 93 HDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQM 152
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
R PNE T+ V+ A + G +H + K D N VG AL+++Y+R G +
Sbjct: 153 LRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLM 212
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
D A VF+ ++ R+ ++N+LIAG A + +A+E+F+ M+ G RP+ ++ + AC
Sbjct: 213 DDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGAC 272
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
S G ++ G + M + E+ F N +
Sbjct: 273 SSTGFLEQGKWVHAYMIKS----------------------GEKLVAFAGN-------TL 303
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
L + IH ++ +++AKR D ++ L AYA G KEAV +M+
Sbjct: 304 LDMYAKSGSIHDARKIFDRLAKR-------DVVSWNSLLTAYAQHGFGKEAVWWFEEMRR 356
Query: 348 AGVQ 351
G++
Sbjct: 357 VGIR 360
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 119/266 (44%), Gaps = 40/266 (15%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L C+ L GR +H+++ + + ++G L+NMY++CG +++A +VFE+M +RD
Sbjct: 66 LLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRD 125
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HG 230
T+ +LI+G + H R +A+ F +M+ G P + T V+ A + HG
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHG 185
Query: 231 GLVDLGFE--------IFQSMTRDYGIEPQIE------------HYGCIVDLLSRVGRPE 270
V GF+ + TR YG+ + + ++ +R E
Sbjct: 186 FCVKCGFDSNVHVGSALLDLYTR-YGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTE 244
Query: 271 EAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRS---ADSGTYVL 324
+A + M P H SL AC G L+ G+ + ++ A +G +L
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLL 304
Query: 325 LSNAYASSGKWKEAVQIRAKMKEAGV 350
+ YA SG +A +I ++ + V
Sbjct: 305 --DMYAKSGSIHDARKIFDRLAKRDV 328
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 37/198 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ +H ++K G + L+++Y K G DA ++FD + + DVV+ ++ Y
Sbjct: 280 QGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAK-RDVVSWNSLLTAY 338
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+HG K+ V W F EM+R +RPNE++ +
Sbjct: 339 AQHGF------------GKEAVWW-------------------FEEMRRVGIRPNEISFL 367
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRI--DLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
VL+ACS G L+ G + M K I + H V ++++ R GD+++AL+ EEM
Sbjct: 368 SVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYV--TVVDLLGRAGDLNRALRFIEEMP 425
Query: 179 -ERDVTTYNSLIAGLAMH 195
E + +L+ MH
Sbjct: 426 IEPTAAIWKALLNACRMH 443
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/488 (38%), Positives = 287/488 (58%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+++H +++ + N LV++Y KC K A +F +M NC
Sbjct: 292 EGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKM-------------NC- 337
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
K+ V WTAM+ G +NG A+ +F +MQ + + P++ T+
Sbjct: 338 ------------------KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLG 379
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+S+C+ L +LE G H + V AL+ +Y +CG I+ + ++F EM
Sbjct: 380 SVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYV 439
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++ +L++G A G++ E + +F M+ G +P KVTF+GVL+ACS GLV G +IF
Sbjct: 440 DEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIF 499
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+SM +++ I P +HY C++DL SR GR EEA FI M +PD I SLLS+C+ H
Sbjct: 500 ESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRN 559
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+++G+ A+ LL ++ +Y+LLS+ YA+ GKW+E +R M++ G++KEPGCS I+
Sbjct: 560 MEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWIK 619
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
N++H F D +P +QIY ++++L + EGY P VLHD++D EK L H
Sbjct: 620 YKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQEGYVPDMNSVLHDVDDSEKIKMLNHH 679
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI +GLI P IRVVKNLRVC DCH+ K I+ IT+R+I+VRD RFH F++G
Sbjct: 680 SEKLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNATKYISKITQREILVRDAARFHLFKDG 739
Query: 481 TCSCGDYW 488
CSCGD+W
Sbjct: 740 RCSCGDFW 747
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 122/450 (27%), Positives = 213/450 (47%), Gaps = 52/450 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++HG V+K G +S LV++Y K G A Q FDEMPE N VV +I +
Sbjct: 161 GLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKN-VVMYNTLIAGLM 219
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+E++ ++F ++ KD++ WTAMI G +NG A+DLFREM+ +N+ ++ T
Sbjct: 220 RCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGS 279
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL+AC + AL+ G+ +H+Y+ + N VG AL++MY +C I A VF +M ++
Sbjct: 280 VLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKN 339
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ +++ G +G S EAV++F +M N GI P T V+++C++ ++ G + F
Sbjct: 340 VVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQ-FH 398
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK--------------------- 280
G+ I +V L + G E+++ + M
Sbjct: 399 CRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKAN 458
Query: 281 -------------IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRS--ADSGTYVLL 325
PD + +LSAC G +Q G QI + ++ Y +
Sbjct: 459 ETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCM 518
Query: 326 SNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKM 385
+ ++ +G+ +EA + KM + G +S +L R + +I K
Sbjct: 519 IDLFSRAGRLEEARKFINKMPFS--PDAIGWAS----------LLSSCRFHRNMEIGKWA 566
Query: 386 QELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
E ++KLE ++ ++ ++L I + +W
Sbjct: 567 AE--SLLKLEPHNTASYILLSSIYAAKGKW 594
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 165/359 (45%), Gaps = 17/359 (4%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+ ++IH ++K LV Y K A ++FD+MP+ N + + +++ Y
Sbjct: 27 DTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRN-LYSWNTLLSSY 85
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN-VRPNEVTI 119
+ + VF + +D V W ++I G + +++ + M + N + +
Sbjct: 86 SKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIAL 145
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+L S+ G + LG +H ++ K VG L++MYS+ G + A Q F+EM E
Sbjct: 146 STMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPE 205
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
++V YN+LIAGL R ++ ++F +M + +++ ++ + GL ++
Sbjct: 206 KNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEK----DSISWTAMIAGFTQNGLDREAIDL 261
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRV-----GRPEEAYDFITNMKIAPDHIMLGSLLSA 294
F+ M R +E +G ++ V G+ AY T+ + D+I +GS L
Sbjct: 262 FREM-RLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQ---DNIFVGSALVD 317
Query: 295 CKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
K + R ++C++ S T +L+ Y +G +EAV+I M+ G++ +
Sbjct: 318 MYCKCKSIKSAETVFRKMNCKNVVSWTAMLV--GYGQNGYSEEAVKIFCDMQNNGIEPD 374
>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/471 (41%), Positives = 291/471 (61%), Gaps = 7/471 (1%)
Query: 25 VELYGKCGEFKD---AMQLFDEMPECN---DVVASTVMINCYVEHGLVENAFEVFSRVKV 78
V + G C + +D +Q+ ++ + DV S+ +I+ Y + G V NA + F ++
Sbjct: 233 VSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRD 292
Query: 79 KDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWI 138
++ V WTA++ ++NG L+LF +M+ ++ RPNE T +L+AC+ L AL G +
Sbjct: 293 RNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLL 352
Query: 139 HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRS 198
H + + IVG ALINMYS+ G+ID + VF M RDV T+N++I G + HG
Sbjct: 353 HGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLG 412
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGC 258
+A+ +F++M++ G P VTF+GVL+AC H LV GF F + + + +EP +EHY C
Sbjct: 413 KQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTC 472
Query: 259 IVDLLSRVGRPEEAYDFI-TNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSA 317
+V LL R G +EA +F+ T ++ D + +LL+AC IH LG+QI + ++
Sbjct: 473 MVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQITETVIQMDPH 532
Query: 318 DSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQ 377
D GTY LLSN +A + KW V+IR MKE ++KEPG S +++ N H F+ HP+
Sbjct: 533 DVGTYTLLSNMHAKARKWDGVVKIRKLMKERNIKKEPGASWLDIRNNTHVFVSEGSNHPE 592
Query: 378 REQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYT 437
QI++K+Q+L ++K GY+P VVLHD+ED +KE L+ HSE+LA+ YGL+ P
Sbjct: 593 STQIFEKVQQLLAMIKPLGYAPDVGVVLHDVEDEQKEGYLSHHSEKLALAYGLMKIPPPG 652
Query: 438 TIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
IR++KNLR+C+DCH +KLI+ T R IIVRD NRFHHF G C+C D+W
Sbjct: 653 PIRIIKNLRMCDDCHIAVKLISKATNRLIIVRDANRFHHFREGLCTCNDHW 703
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 158/338 (46%), Gaps = 45/338 (13%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D+ +IN Y + G + A ++F R+ ++ V W+A++ G + GE+ L LFR +
Sbjct: 59 SDITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNL 118
Query: 108 -QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
D+ PNE VLS C+ G ++ G+ H Y+ K + L+ V ALI+MYSRC
Sbjct: 119 VSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFH 178
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+D A+Q+ + + DV +YNS+++ L G EA ++ + M+++ + VT+V VL
Sbjct: 179 VDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGL 238
Query: 227 CS-----------HGGLVDLG--FEIFQSMT--RDYGI---------------EPQIEHY 256
C+ H L+ G F++F S T YG + + +
Sbjct: 239 CAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAW 298
Query: 257 GCIVDLLSRVGRPEEAYDFITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
++ + G EE + T M++ P+ LL+AC L G+ LL
Sbjct: 299 TAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGD-----LLH 353
Query: 314 CRSADSG--TYVLLSNA----YASSGKWKEAVQIRAKM 345
R SG ++++ NA Y+ SG + + + M
Sbjct: 354 GRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNM 391
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 149/318 (46%), Gaps = 39/318 (12%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG++ HG +LK GL ++ + L+ +Y +C AMQ+ D +P +DV + +++
Sbjct: 146 EGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPG-DDVFSYNSILSAL 204
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
VE G A +V R+ V + V W + VT V
Sbjct: 205 VESGCRGEAAQVLKRM-VDECVIW------------------------------DSVTYV 233
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL C+Q+ L+LG IH+ + K + + V LI+ Y +CG++ A + F+ +++R
Sbjct: 234 SVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDR 293
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF-EI 239
+V + +++ +G E + +F +M + RP + TF +LNAC+ LV L + ++
Sbjct: 294 NVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACA--SLVALAYGDL 351
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
G + + ++++ S+ G + +Y+ +NM + D I +++ HG
Sbjct: 352 LHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNM-MNRDVITWNAMICGYSHHG 410
Query: 300 KLQLGEQIAKRLLDCRSA 317
LG+Q D SA
Sbjct: 411 ---LGKQALLVFQDMMSA 425
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/556 (35%), Positives = 302/556 (54%), Gaps = 69/556 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKD------------------------- 36
GR++H ++K+ + + + L+++Y KCG +D
Sbjct: 308 GRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSN 367
Query: 37 ------AMQLFDEMP----ECNDVVASTVM------------------------------ 56
AM LF M E N ST++
Sbjct: 368 CGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYV 427
Query: 57 ----INCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
++ Y + L+E+A +VF +D V +T+MI + G AL ++ MQ ++
Sbjct: 428 ANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDI 487
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
+P+ + +AC+ L A E G+ IH ++ K + + G +L+NMY++CG ID A
Sbjct: 488 KPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASC 547
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
+F E+ R + +++++I GLA HG +A+++F +M+ GI P +T V VL+AC+H GL
Sbjct: 548 IFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGL 607
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
V F M + +GI P EHY C+VD+L RVGR +EA + M + G+LL
Sbjct: 608 VTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALL 667
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
A +IH ++LG A+ LL SGT++LL+N YAS+G W ++R MK + V+K
Sbjct: 668 GAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKK 727
Query: 353 EPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE 412
EPG S IE+ ++++ FI+GD HP+ ++IY K+ +L++ + GY P E LHD+E E
Sbjct: 728 EPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRERLTSAGYVPMIETDLHDVEQIE 787
Query: 413 KEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRN 472
KE L HSE+LA+ +GLI+T P IRV KNLRVC DCH+ K I+ + R+IIVRD N
Sbjct: 788 KEQLLWHHSEKLAVAFGLIATPPGAPIRVKKNLRVCIDCHTAFKFISKVASREIIVRDIN 847
Query: 473 RFHHFENGTCSCGDYW 488
RFHHF +G+CSCGDYW
Sbjct: 848 RFHHFRDGSCSCGDYW 863
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 154/337 (45%), Gaps = 34/337 (10%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D ++ +++ Y + G E A VF + D V W A+I G V + + AL L +M
Sbjct: 221 SDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKM 280
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
V P+ T+ L AC+ +G ++LGR +HS + K ++ + VG LI+MYS+CG +
Sbjct: 281 GSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLL 340
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A VF+ M +DV +NS+I+G + G IEA+ +F M +G+ + T +L +
Sbjct: 341 QDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKST 400
Query: 228 S-----------HGGLVDLGFE----IFQSMTRDYG-------------IEP--QIEHYG 257
+ H + G++ + S+ YG + P + Y
Sbjct: 401 AGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYT 460
Query: 258 CIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC 314
++ S+ G EEA M+ I PD + SL +AC + G+QI +L C
Sbjct: 461 SMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKC 520
Query: 315 -RSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
+D L N YA G +A I ++ G+
Sbjct: 521 GLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGI 557
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 148/279 (53%), Gaps = 12/279 (4%)
Query: 25 VELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENA----FEVFSRVKVKD 80
V LY KC F+ A +L + E D+V+ + +I+ YV++G E A +E++ +
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSE-PDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGN 147
Query: 81 TVCWTAMIDG--LVRNGEMARALD---LFREMQRDNVRPNEVTIVCVLSACSQLGALELG 135
+++++ G L RN E+ + + L EM + PNE ++ VL+AC+ L G
Sbjct: 148 EFTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYG 207
Query: 136 RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMH 195
+H Y+ K D + AL++MY++ G + A+ VF E+ + D+ ++N++IAG +H
Sbjct: 208 MKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLH 267
Query: 196 GRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEH 255
++ A+++ +M + + P+ T L AC+ GLV LG ++ ++ + +EP
Sbjct: 268 EKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMK-MDMEPDSFV 326
Query: 256 YGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
++D+ S+ G ++A + ++ D I+ S++S
Sbjct: 327 GVGLIDMYSKCGLLQDA-RMVFDLMPXKDVIVWNSIISG 364
>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
Length = 771
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/473 (41%), Positives = 301/473 (63%), Gaps = 9/473 (1%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPE---CNDVVASTVMINCYVEHGLVENAFEVFSRVKVKD 80
L+E Y + G+ + +LF M VVA T ++N Y + G V++A V + V+
Sbjct: 300 LLEGYSRTGDLDEVRRLFSAMEHRTVATTVVAGT-LVNLYGKCGRVDDARRVLDAMPVRT 358
Query: 81 TVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHS 140
+V WTAMI +NG A A++LF+ M + P+++T++ V+ +C+ LG L LG+ IH+
Sbjct: 359 SVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHA 418
Query: 141 YMGKHRI-DLNHIVGGALINMYSRCGDIDKALQVFEE--MKERDVTTYNSLIAGLAMHGR 197
+ + + ++ A+I MY +CG+++ A +VFE ++ R V T+ ++I A +G
Sbjct: 419 RIRSSPLFSQSLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVVTWTAMIRAYAQNGV 478
Query: 198 SIEAVEMFREM-INQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHY 256
EA+E+F+EM I+ G P +VTF+ VL+ACSH G ++ +E F SM D+G+ P +HY
Sbjct: 479 GEEAIELFQEMVIDGGTEPNRVTFLSVLSACSHLGQLEQAWEHFCSMGPDFGVPPAGDHY 538
Query: 257 GCIVDLLSRVGRPEEAYDFITNMK-IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR 315
C+VDLL R GR EA + K D + + LSAC+++G L+ ++ AKR+ +
Sbjct: 539 CCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELE 598
Query: 316 SADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRH 375
+ VLLSN YA+ G+ + +IR +MK +GV+K G S IE+NN +HEF++ D+ H
Sbjct: 599 PENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSH 658
Query: 376 PQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKP 435
P++ +IY +++ L + +K GY P T++VL D+++ +K L HSERLA+ G+IST P
Sbjct: 659 PRKLEIYSELERLHREIKEAGYVPDTKMVLRDVDEEKKAQLLGYHSERLAMALGIISTPP 718
Query: 436 YTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
TT+RVVKNLRVC+DCH+ K I+ I R+IIVRD +RFHHF++G CSCGDYW
Sbjct: 719 GTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGDYW 771
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 133/333 (39%), Gaps = 67/333 (20%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
++ Y + DA +LF M DVV+ +++ Y H +E A +F R+ + DTV
Sbjct: 110 MIAAYARINRLDDARELFHGMISGRDVVSWAILVAGYARHDRLEEASALFRRMPLWDTVT 169
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
T+++ G NG +A A +LF + R +AC+ + I +Y
Sbjct: 170 CTSVLQGYAHNGHLAEAQELFDRIGGAGDRDA--------TACNAM--------IAAYGK 213
Query: 144 KHRIDL-----------NHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGL 192
R+DL N L+ Y++ G +D A + F+ M +RD + ++ A L
Sbjct: 214 NARVDLAEGLFAQIKLRNAASWSLLLLTYAQNGHLDLAKKSFDRMPQRDSIAFTAMTAVL 273
Query: 193 AMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQ 252
+ G A EM R + + + + +L S G +D +F +M ++
Sbjct: 274 SDQGELRGAREMLRYLSAVDV----IAWNALLEGYSRTGDLDEVRRLFSAM--EHRTVAT 327
Query: 253 IEHYGCIVDLLSRVGRPEEAYDFITNMKI------------------------------- 281
G +V+L + GR ++A + M +
Sbjct: 328 TVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDL 387
Query: 282 ---APDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
P I L S++ +C + G L LG++I R+
Sbjct: 388 EGAEPSDITLISVVDSCAVLGTLSLGKRIHARI 420
>gi|449436862|ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
gi|449508034|ref|XP_004163198.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
Length = 606
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/489 (38%), Positives = 290/489 (59%), Gaps = 33/489 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG +IHG V KLGL + + L+ +YGKC +
Sbjct: 150 EGMQIHGHVFKLGLEDDVYVQNSLINMYGKCRD--------------------------- 182
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV-RPNEVTI 119
+E + +F R++ K W+A+I L LF +M R+ R E +
Sbjct: 183 -----IEMSCAIFRRMEQKSVASWSAIIAAHASLAMWWECLALFEDMSREGCWRAEESIL 237
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V VLSAC+ LGA LGR H + K+ +LN V +L++MY +CG + K L +F+ M
Sbjct: 238 VNVLSACTHLGAFHLGRCAHGSLLKNITELNVAVMTSLMDMYVKCGSLQKGLCLFQNMTR 297
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
++ +Y+ +I+GL +HG +A+++F EM+ +G+ P VT+V VL+ACSH GLVD G ++
Sbjct: 298 KNQLSYSVIISGLGLHGYGRQALQIFSEMVEEGLEPDDVTYVSVLSACSHSGLVDEGLDL 357
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F M +Y IEP ++HYGC+VDL R G EEA+ + +M I + ++ SLLSACK+H
Sbjct: 358 FDKMKFEYRIEPTMQHYGCMVDLKGRAGLLEEAFQLVQSMPIKANDVLWRSLLSACKVHD 417
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
L+LGE A+ L S + Y++LSN YA + +W+ A +IR KM G+ + PG S +
Sbjct: 418 NLKLGEIAAENLFRLSSHNPSDYLVLSNMYARAQQWENAAKIRTKMINRGLIQTPGYSLV 477
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
EV +++++F+ D + + IYK + +++ ++ EGY P T V+ D+++ EK L
Sbjct: 478 EVKSKVYKFVSQDKSYCKSGNIYKMIHQMEWQLRFEGYMPDTSQVMLDVDEEEKGERLKG 537
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HS++LAI + LI T + IR+++NLR+CNDCHS KL++ I +R+I VRDRNRFHHF++
Sbjct: 538 HSQKLAIAFALIHTSQGSAIRIIRNLRMCNDCHSYTKLVSMIYEREITVRDRNRFHHFKD 597
Query: 480 GTCSCGDYW 488
G CSC DYW
Sbjct: 598 GNCSCRDYW 606
>gi|357484833|ref|XP_003612704.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514039|gb|AES95662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 572
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/489 (39%), Positives = 297/489 (60%), Gaps = 33/489 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG ++HG V K+GL + + L+ +YGKC
Sbjct: 116 EGIQVHGHVFKMGLEGDVIVQNSLINMYGKC----------------------------- 146
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN-VRPNEVTI 119
G ++NA +VF+ + K W+A+I L L +M + R E T+
Sbjct: 147 ---GEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLLGKMSSEGRCRVEESTL 203
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V VLSAC+ LG+ +LG+ IH + ++ +LN +V +LI+MY + G ++K L+VF+ M E
Sbjct: 204 VNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTSLIDMYVKSGCLEKGLRVFKNMSE 263
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
++ +Y +I+GLA+HGR EA+++F EMI +G+ P V +VGV +ACSH GLV+ G +
Sbjct: 264 KNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVGVFSACSHAGLVEEGLQC 323
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F+SM ++ IEP ++HYGC+VDLL R G +EAY+ I +M I P+ ++ SLLSACK+H
Sbjct: 324 FKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSIKPNDVIWRSLLSACKVHH 383
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
L++G+ A+ L +SG Y++L+N YA + KW + +IR K+ E + + PG S I
Sbjct: 384 NLEIGKIAAENLFMLNQNNSGDYLVLANMYAKAQKWDDVAKIRTKLAERNLVQTPGFSLI 443
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E ++++F+ D PQ IY+ + +++ +K EGY P T VL D++D EK+ L
Sbjct: 444 EAKRKVYKFVSQDKSIPQWNIIYEMIHQMEWQLKFEGYIPDTSQVLLDVDDEEKKERLKF 503
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HS++LAI +GLI T + +R+ +NLR+C+DCH+ K I+ I +R+I VRDR RFHHF+N
Sbjct: 504 HSQKLAIAFGLIHTSEGSPLRITRNLRMCSDCHTYTKYISMIYEREITVRDRLRFHHFKN 563
Query: 480 GTCSCGDYW 488
G+CSC DYW
Sbjct: 564 GSCSCKDYW 572
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 157/319 (49%), Gaps = 15/319 (4%)
Query: 30 KCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMID 89
KCG F D + +++VA+ + + G ++ A +F+++ + + MI
Sbjct: 23 KCGIFFDTFCM-------SNLVATCAL----TKWGSMDYACSIFTQIDEPSSFDYNTMIR 71
Query: 90 GLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDL 149
G V + ++ AL L+ +M V P++ T VL ACS LG ++ G +H ++ K ++
Sbjct: 72 GNVNDMKLEEALLLYVDMIERGVEPDKFTYPFVLKACSLLGVVDEGIQVHGHVFKMGLEG 131
Query: 150 NHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
+ IV +LINMY +CG+I A VF M E+ V +++++I A E + + +M
Sbjct: 132 DVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLLGKMS 191
Query: 210 NQG-IRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGR 268
++G R + T V VL+AC+H G DLG I + R+ E + ++D+ + G
Sbjct: 192 SEGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNIS-ELNVVVKTSLIDMYVKSGC 250
Query: 269 PEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL-DCRSADSGTYVLLSN 327
E+ NM + ++S IHG+ + ++ ++ + + D YV + +
Sbjct: 251 LEKGLRVFKNMS-EKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVGVFS 309
Query: 328 AYASSGKWKEAVQIRAKMK 346
A + +G +E +Q M+
Sbjct: 310 ACSHAGLVEEGLQCFKSMQ 328
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/467 (39%), Positives = 288/467 (61%)
Query: 22 LKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDT 81
+ L+++Y KCG+ A ++FD + MI+ Y + G V+ A +F +++ D
Sbjct: 276 VALIDMYAKCGDTGRAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDV 335
Query: 82 VCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSY 141
+ + ++I G + G + AL LF +M+R + + T+V +L+A + LGAL GR +H+
Sbjct: 336 ITFNSLITGYIHGGRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHAC 395
Query: 142 MGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEA 201
+ + ++ + +G AL++MY +CG +++A+ F++M RDV T++++I GLA +G A
Sbjct: 396 IEQRLVERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAA 455
Query: 202 VEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVD 261
+E F M G VT++ VL ACSH L+D G F M + I PQIEHYGC++D
Sbjct: 456 LEHFFWMKCDGFHANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMID 515
Query: 262 LLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT 321
LL R G +EA D + M + P+ ++ S+LSAC++H + L + A LL A+
Sbjct: 516 LLGRSGLLDEAMDLVQTMPMQPNAVIWASILSACRVHKNVDLAQNAAHHLLKLEPAEDAV 575
Query: 322 YVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQI 381
YV + N Y S +W++A +IR M++ GV+K G SSI V ++H+FI+GD HPQ +I
Sbjct: 576 YVQMYNIYIDSRQWEDASKIRRLMEKRGVKKTAGYSSIAVAGQVHKFIVGDRSHPQIAEI 635
Query: 382 YKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRV 441
M+E+ + +K GYSP T + D+++ EKE AL HSE+LAI +GL+S P + +
Sbjct: 636 VVMMEEIGRRLKSAGYSPITSQITVDVDEEEKEQALLAHSEKLAIAFGLVSLAPNLPVHI 695
Query: 442 VKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
+KNLRVC DCHS IKLI+ + R+IIVRDR+RFHHF G CSC D+W
Sbjct: 696 IKNLRVCEDCHSAIKLISRLWNREIIVRDRSRFHHFRGGVCSCNDFW 742
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 171/367 (46%), Gaps = 41/367 (11%)
Query: 2 GREIHGQVLKLGLRSNRS-TRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
GR +H + L S ++ +Y + G DA + FDE DVVA T +I+
Sbjct: 123 GRMLHAACFRTLLPSAVPLIASPIIHMYAELGLPGDARRAFDE-ASVKDVVAWTTVISGL 181
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ GL+++A + +R V++ V WT +I G R G A A+D F M D + P+EVT++
Sbjct: 182 AKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVI 241
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD-------------- 166
+LSAC QL L G +H +G R+ ++ + ALI+MY++CGD
Sbjct: 242 GMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDALGRG 301
Query: 167 ------------------IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM 208
+D A +F++M++ DV T+NSLI G GR EA+ +F +M
Sbjct: 302 RGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKM 361
Query: 209 INQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGR 268
G+ T VG+L A + G + G + + + +E + ++D+ + GR
Sbjct: 362 RRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRL-VERDVYLGTALLDMYMKCGR 420
Query: 269 PEEAYDFITNMKIAPDHI---MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLL 325
EEA M + H M+G L A GK L E D A+S TY+ +
Sbjct: 421 VEEAMVAFKQMSVRDVHTWSAMIGGL--AFNGMGKAAL-EHFFWMKCDGFHANSVTYIAV 477
Query: 326 SNAYASS 332
A + S
Sbjct: 478 LTACSHS 484
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 136/324 (41%), Gaps = 49/324 (15%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A +F R+ + TA+ + R + L+R M +V P+ T + C++
Sbjct: 56 ALSLFDRMPCSTFLFDTALRACFRASSGPDRPIILYRRMHGVDVPPDAFTFHFLFKCCAR 115
Query: 129 LGA-LELGRWIHSYMGKHRIDLN-HIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYN 186
GA + LGR +H+ + + ++ +I+MY+ G A + F+E +DV +
Sbjct: 116 GGAHVLLGRMLHAACFRTLLPSAVPLIASPIIHMYAELGLPGDARRAFDEASVKDVVAWT 175
Query: 187 SLIAGLAM-------------------------------HGRSIEAVEMFREMINQGIRP 215
++I+GLA GR+ EAV+ F M++ GI P
Sbjct: 176 TVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAP 235
Query: 216 TKVTFVGVLNACSHGGLVDLGFEI-FQSMTRDYGIEPQIEHYGCIVDLLSR---VGRPEE 271
+VT +G+L+AC G L DL F + D + + ++D+ ++ GR E
Sbjct: 236 DEVTVIGMLSAC--GQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRARE 293
Query: 272 AYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGE-QIAKRLLD-CRSADSGTYVLLSNAY 329
+D + + G I G ++G IA+ L D D T+ L Y
Sbjct: 294 VFDALGRGR--------GPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGY 345
Query: 330 ASSGKWKEAVQIRAKMKEAGVQKE 353
G+ +EA+ + KM+ G+ +
Sbjct: 346 IHGGRLREALLLFTKMRRHGLGAD 369
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/483 (38%), Positives = 284/483 (58%), Gaps = 4/483 (0%)
Query: 9 VLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMINCYVEHGL 65
+LK + N T L++ G + Q+ +C+ DV + +++ Y G+
Sbjct: 143 MLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGM 202
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
++ A VF ++ K+ V W A+I G R G+ AL F EM R+ T V S+
Sbjct: 203 MDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSS 262
Query: 126 CSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTY 185
++LGALE G+W+H++M K R + G L++MY++ G + A +VF+ + ++D+ T+
Sbjct: 263 IARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTW 322
Query: 186 NSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR 245
N+++ A +G EAV F EM GI +VTF+ +L ACSHGGLV G F+ M +
Sbjct: 323 NTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFE-MMK 381
Query: 246 DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGE 305
+Y +EP+I+H+ +V LL R G A FI M I P + G+LL+AC++H ++G+
Sbjct: 382 EYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIEPTAAVWGALLAACRMHKNAKVGQ 441
Query: 306 QIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEI 365
A + + DSG VLL N YAS+G+W A ++R MK GV+KEP CS +E+ N +
Sbjct: 442 FAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRRIMKTTGVKKEPACSWVEMENSV 501
Query: 366 HEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLA 425
H F+ D HP+ E+IYK ++ + ++ EGY P + VL ++D E+E L HSE+LA
Sbjct: 502 HMFVANDDTHPRAEEIYKMWGQISKKIRKEGYVPDMDYVLLRVDDQEREANLQYHSEKLA 561
Query: 426 ICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCG 485
+ + LI TIR++KN+R+C DCHS K I+ + R+I+VRD NRFHHF NG+CSC
Sbjct: 562 LAFALIEMPAGATIRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNRFHHFSNGSCSCA 621
Query: 486 DYW 488
DYW
Sbjct: 622 DYW 624
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 147/316 (46%), Gaps = 19/316 (6%)
Query: 47 CNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
D +I+ Y + G V A +VF ++ KD V WT++I G +N A+ L
Sbjct: 83 AGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPG 142
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M + +PN T +L A +GR IH+ K + VG AL++MY+RCG
Sbjct: 143 MLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGM 202
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+D A VF+++ ++ ++N+LI+G A G A+ F EM+ G T T+ V ++
Sbjct: 203 MDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSS 262
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYG--CIVDLLSRVGRPEEA---YDFITNMKI 281
+ G ++ G + M + ++ + ++D+ ++ G +A +D + +
Sbjct: 263 IARLGALEQGKWVHAHMIKS---RQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDD--- 316
Query: 282 APDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSA----DSGTYVLLSNAYASSGKWKE 337
D + ++L+A +G LG++ + R + + T++ + A + G KE
Sbjct: 317 -KDLVTWNTMLTAFAQYG---LGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKE 372
Query: 338 AVQIRAKMKEAGVQKE 353
+ MKE ++ E
Sbjct: 373 GKRYFEMMKEYDLEPE 388
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 118/284 (41%), Gaps = 51/284 (17%)
Query: 99 RALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALI 158
R LDL + + P ++AC+Q LE R +H+++ R + + +LI
Sbjct: 37 RDLDL---LDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLI 93
Query: 159 NMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKV 218
++Y +CG + +A +VF+EM+ +D+ ++ SLIAG A + EA+ + M+ +P
Sbjct: 94 HLYCKCGSVLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGF 153
Query: 219 TFVGVLNAC-SHG----------------------------------GLVDLGFEIFQSM 243
TF +L A +H G++D+ +F +
Sbjct: 154 TFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKL 213
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGK 300
G+ + ++ +R G E A M H S+ S+ G
Sbjct: 214 DSKNGVS-----WNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGA 268
Query: 301 LQLGEQIAKRLLDCR---SADSGTYVLLSNAYASSGKWKEAVQI 341
L+ G+ + ++ R +A +G +L + YA SG +A ++
Sbjct: 269 LEQGKWVHAHMIKSRQKMTAFAGNTLL--DMYAKSGSMIDARKV 310
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 89/198 (44%), Gaps = 37/198 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ +H ++K + L+++Y K G DA ++FD + + D+V M+ +
Sbjct: 271 QGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDD-KDLVTWNTMLTAF 329
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++GL + A+ F EM++ + N+VT +
Sbjct: 330 AQYGLGK-------------------------------EAVSHFEEMRKSGIYLNQVTFL 358
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRI--DLNHIVGGALINMYSRCGDIDKALQ-VFEEM 177
C+L+ACS G ++ G+ M ++ + +++H V ++ + R G ++ AL +F+
Sbjct: 359 CILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHFV--TVVALLGRAGLLNFALVFIFKMP 416
Query: 178 KERDVTTYNSLIAGLAMH 195
E + +L+A MH
Sbjct: 417 IEPTAAVWGALLAACRMH 434
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/488 (39%), Positives = 284/488 (58%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG++IH V++ + N LV++Y KC K A
Sbjct: 288 EGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAET--------------------- 326
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
VF R+ K+ + WTAM+ G +NG A+ +F EMQR+ V P++ T+
Sbjct: 327 -----------VFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLG 375
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+S+C+ L +LE G H + V ALI +Y +CG + + ++F EM R
Sbjct: 376 SVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIR 435
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++ +L+AG A G++ E + +F M+ G++P VTF+GVL+ACS GLV+ G + F
Sbjct: 436 DEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYF 495
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+SM +++GI P ++H CI+DLL R GR EEA +FI NM PD + +LLS+C++HG
Sbjct: 496 ESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGD 555
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+++G+ A L+ + +YVLLS+ YAS GKW + Q+R M++ V+KEPG S I+
Sbjct: 556 MEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWIK 615
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
++H F D P QIY ++++L + EGY P VLHD+E+ EK L H
Sbjct: 616 YKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEGYVPDMSSVLHDVEESEKIKMLNHH 675
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI +GLI P IRV+KNLRVC DCH+ K I+ IT+R+I+VRD RFH F++G
Sbjct: 676 SEKLAIAFGLIFVPPGLPIRVIKNLRVCGDCHNATKFISKITQREILVRDAVRFHLFKDG 735
Query: 481 TCSCGDYW 488
TCSCGD+W
Sbjct: 736 TCSCGDFW 743
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 190/351 (54%), Gaps = 5/351 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+I+GQ+LK G S+ LV++Y K G DA + FDEMPE N V+ +T MI +
Sbjct: 157 GRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNT-MITGLM 215
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G++E + +F +K +D++ WT MI GL++NG ALD+FREM+ ++ T
Sbjct: 216 RCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGS 275
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL+AC L AL G+ IH+Y+ + N VG AL++MYS+C I A VF+ M +++
Sbjct: 276 VLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKN 335
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ +++ G +G S EAV++F EM G+ P T V+++C++ ++ G + F
Sbjct: 336 VISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQ-FH 394
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
G+ I ++ L + G E ++ T M I D + +LL+ GK
Sbjct: 395 CRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIR-DEVSWTALLAGYAQFGKA 453
Query: 302 QLGEQIAKRLL-DCRSADSGTYVLLSNAYASSGKWKEAVQ-IRAKMKEAGV 350
+ +R+L D T++ + +A + +G ++ +Q + +KE G+
Sbjct: 454 NETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGI 504
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 172/399 (43%), Gaps = 81/399 (20%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+ +++H +LK + L+ Y K G A +FD +P+ N +T++ + Y
Sbjct: 23 QAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQPNLFSWNTIL-SVY 81
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN-VRPNEVTI 119
+ GL+ ++F+ + +D V W I G G + A+ +++ M +D + N +T
Sbjct: 82 SKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITF 141
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYS----------------- 162
+L CS+ ++LGR I+ + K + VG L++MY+
Sbjct: 142 STMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPE 201
Query: 163 --------------RCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM 208
RCG I+++ ++F +KERD ++ +I GL +G EA++MFREM
Sbjct: 202 RNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREM 261
Query: 209 INQGIRPTKVTFVGVLNACSHGGLVDL--GFEIFQSMTR-DYGIEPQIEHYGCIVDLLSR 265
G + TF VL AC G L+ L G +I + R D+ + + +VD+ S+
Sbjct: 262 RLAGFAMDQFTFGSVLTAC--GSLLALGEGKQIHAYVIRTDH--KDNVFVGSALVDMYSK 317
Query: 266 V-------------------------------GRPEEAYDFITNMK---IAPDHIMLGSL 291
G EEA M+ + PD LGS+
Sbjct: 318 CRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSV 377
Query: 292 LSACKIHGKLQLGEQIAKRLLDCRSADSG--TYVLLSNA 328
+S+C L+ G Q CR+ SG +++ +SNA
Sbjct: 378 ISSCANLASLEEGAQ-----FHCRALVSGLISFITVSNA 411
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/488 (38%), Positives = 282/488 (57%), Gaps = 31/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G IHG ++KLG S+ + L+++Y KCG A LF++
Sbjct: 549 QGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTD--------------- 593
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
KD V W +I ++NG A+ F +M+ +N PN VT V
Sbjct: 594 ----------------FTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFV 637
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL A + L A G H+ + + N +VG +LI+MY++CG + + ++F EM +
Sbjct: 638 SVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHK 697
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++N++++G A+HG A+ +F M ++ V+FV VL+AC H GLV+ G +IF
Sbjct: 698 DTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIF 757
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM+ Y I+P +EHY C+VDLL R G +E FI M + PD + G+LL +C++H
Sbjct: 758 HSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSN 817
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++LGE L+ + +V+LS+ YA SG+W +A + R+KM + G++K PGCS +E
Sbjct: 818 VKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVE 877
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+ N++H F +GD HPQ E ++ L + ++ GY P VL ++E+ +KE L H
Sbjct: 878 LKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSH 937
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLAI + L++T P +TI++VKNLRVC DCH+ K I+ IT R+IIVRD RFHHFE+G
Sbjct: 938 SERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDG 997
Query: 481 TCSCGDYW 488
CSC DYW
Sbjct: 998 ICSCNDYW 1005
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 160/350 (45%), Gaps = 34/350 (9%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+EIHG L+ + S+ L+ +Y KCGE
Sbjct: 347 KGKEIHGCALQQRIDSDILVATPLMVMYAKCGE--------------------------- 379
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
E A ++F ++ +D V W+A+I LV+ G AL LF+EMQ ++PN VT++
Sbjct: 380 -----TEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLM 434
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L AC+ L L+LG+ IH + K +D + G AL++MY++CG AL F M R
Sbjct: 435 SILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSR 494
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D+ T+NSLI G A G A++MF ++ I P T VGV+ AC+ +D G I
Sbjct: 495 DIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCI- 553
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ G E ++D+ ++ G A D + +++A +G
Sbjct: 554 HGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGH 613
Query: 301 LQLG-EQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
+ + L+ +S T+V + A A ++E + A + + G
Sbjct: 614 AKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMG 663
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 177/384 (46%), Gaps = 74/384 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG HG++ + GL + LV++Y K G+ K A ++FD+MP+
Sbjct: 147 EGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPK-------------- 192
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+D V W AMI GL ++ + A+D FR MQ V P+ V+++
Sbjct: 193 ------------------RDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLL 234
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+ +L +EL R IH Y+ R D + V LI++YS+CGD+D A +VF++M ++
Sbjct: 235 NLFPGICKLSNIELCRSIHGYV--FRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQ 292
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++ +++AG A +G +E +E+F +M +R KV+ V A + ++ G EI
Sbjct: 293 DDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIH 352
Query: 241 -----QSMTRD------------------------YGIEPQ-IEHYGCIVDLLSRVGRPE 270
Q + D +G++ + + + I+ L + G PE
Sbjct: 353 GCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPE 412
Query: 271 EA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQI----AKRLLDCRSADSGTYV 323
EA + + N K+ P+ + L S+L AC L+LG+ I K +D +D T
Sbjct: 413 EALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMD---SDLSTGT 469
Query: 324 LLSNAYASSGKWKEAVQIRAKMKE 347
L + YA G + A+ +M
Sbjct: 470 ALVSMYAKCGFFTAALTTFNRMSS 493
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 151/327 (46%), Gaps = 47/327 (14%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
R IHG V + S S L++LY KCG+
Sbjct: 250 RSIHGYVFRRDFSSAVSN--GLIDLYSKCGD----------------------------- 278
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
V+ A VF ++ +D V W M+ G NG L+LF +M+ NVR N+V+ V
Sbjct: 279 ---VDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSA 335
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
A ++ LE G+ IH + RID + +V L+ MY++CG+ +KA Q+F ++ RD+
Sbjct: 336 FLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDL 395
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
++++IA L G EA+ +F+EM NQ ++P +VT + +L AC+ L+ LG I
Sbjct: 396 VAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSI-HC 454
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
T ++ + +V + ++ G A M + D + SL I+G Q
Sbjct: 455 FTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMS-SRDIVTWNSL-----INGYAQ 508
Query: 303 LG------EQIAKRLLDCRSADSGTYV 323
+G + K L + D+GT V
Sbjct: 509 IGDPYNAIDMFYKLRLSAINPDAGTMV 535
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 91/171 (53%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
T +IN Y + A VF + W +MI R+ + AL+++ M +
Sbjct: 67 THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLE 126
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
P++ T VL AC+ L+ G W H + + ++ + +G L++MYS+ GD+ +A +V
Sbjct: 127 PDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREV 186
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL 224
F++M +RDV +N++IAGL+ EAV+ FR M G+ P+ V+ + +
Sbjct: 187 FDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLF 237
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 12/175 (6%)
Query: 122 VLSACSQLGAL-ELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+LS+C L L ++ I KH + H LIN+YS D A VF+
Sbjct: 38 LLSSCKHLNPLLQIHAQIIVSGFKHHHSITH-----LINLYSLFHKCDLARSVFDSTPNP 92
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI- 239
+NS+I + EA+EM+ M+ +G+ P K TF VL AC+ G ++L +
Sbjct: 93 SRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACT--GALNLQEGVW 150
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVG---RPEEAYDFITNMKIAPDHIMLGSL 291
F G+E + +VD+ S++G R E +D + + + M+ L
Sbjct: 151 FHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGL 205
>gi|297823173|ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325308|gb|EFH55728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 583
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/444 (42%), Positives = 278/444 (62%), Gaps = 5/444 (1%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D ++ Y + G +E A +VF R+ K V W +++ G +NG A+ +F +M+
Sbjct: 141 DTYVQAALVTFYSKCGDMEAARQVFDRMPEKSVVAWNSLVSGFEQNGLAEDAIRVFYQMR 200
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
P+ T V +LSAC+Q GA+ LG W+H Y+ +D+N +G ALIN+YSRCGD+
Sbjct: 201 ESGFEPDSATFVSLLSACAQTGAISLGSWVHQYIVSEGLDVNVKLGTALINLYSRCGDVG 260
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ-GIRPTKVTFVGVLNAC 227
KA +VF++MKE +V + ++I+ HG +AV++F +M + G P VTFV VL+AC
Sbjct: 261 KAREVFDKMKETNVAAWTAMISAYGTHGYGKQAVDLFNKMEDDCGSIPNNVTFVAVLSAC 320
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKI---APD 284
+H GLV+ G +++ MT Y + P +EH+ CIVD+L R G +EAY FI + A
Sbjct: 321 AHAGLVEDGRSVYKRMTESYRLIPGVEHHVCIVDMLGRAGFLDEAYRFIQQLDATGNATA 380
Query: 285 HIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAK 344
+ ++L ACK+H LG +IAKRL+ + G +V+LSN YA SGK E IR +
Sbjct: 381 PALWTAMLGACKMHRNYDLGVEIAKRLIALEPENPGHHVMLSNIYALSGKTDEVSHIRDR 440
Query: 345 MKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVV 404
M ++K+ G S IEV N+ + F +GD H + +IY+ ++ L K GY+P +E V
Sbjct: 441 MMRNNLRKQVGYSIIEVENKTYLFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEV 500
Query: 405 LHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKR 464
+H +E+ EKE+AL HSE+LA+ +GL+ T + I VVKNLR+C DCHS K I+ ++ R
Sbjct: 501 MHQVEEEEKEFALRYHSEKLAVAFGLLKTVD-SAITVVKNLRICEDCHSAFKYISIVSNR 559
Query: 465 KIIVRDRNRFHHFENGTCSCGDYW 488
+IIVRD+ RFHHF+NG+CSC DYW
Sbjct: 560 QIIVRDKLRFHHFQNGSCSCLDYW 583
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 145/282 (51%), Gaps = 10/282 (3%)
Query: 72 VFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGA 131
+F V + D + ++I + + +R M NV P+ T V+ +C+ L A
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSA 122
Query: 132 LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAG 191
L++G+ +H + L+ V AL+ YS+CGD++ A QVF+ M E+ V +NSL++G
Sbjct: 123 LKIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEAARQVFDRMPEKSVVAWNSLVSG 182
Query: 192 LAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEP 251
+G + +A+ +F +M G P TFV +L+AC+ G + LG + Q + + G++
Sbjct: 183 FEQNGLAEDAIRVFYQMRESGFEPDSATFVSLLSACAQTGAISLGSWVHQYIVSE-GLDV 241
Query: 252 QIEHYGCIVDLLSR---VGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIA 308
++ +++L SR VG+ E +D + +A +++SA HG + +
Sbjct: 242 NVKLGTALINLYSRCGDVGKAREVFDKMKETNVAA----WTAMISAYGTHGYGKQAVDLF 297
Query: 309 KRLL-DCRS-ADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
++ DC S ++ T+V + +A A +G ++ + +M E+
Sbjct: 298 NKMEDDCGSIPNNVTFVAVLSACAHAGLVEDGRSVYKRMTES 339
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/489 (39%), Positives = 291/489 (59%), Gaps = 34/489 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+IH +K S+ L+++Y K G DA +F +PE
Sbjct: 210 GRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPE--------------- 254
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+D V TA+I G + G AL LFR++Q + + N VT
Sbjct: 255 -----------------RDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYAS 297
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL+A S L AL G+ +HS++ + ++ +LI+MYS+CG++ A ++F+ M ER
Sbjct: 298 VLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERT 357
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSHGGLVDLGFEIF 240
++N+++ G + HG + E +E+F+ M + ++P +T++ VL+ CSHG L D+G EIF
Sbjct: 358 CISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIF 417
Query: 241 QSMTRDY-GIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+M GIEP I HYGC+VDLL R GR EEA+DFI M P + GSLL +C++H
Sbjct: 418 YNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHS 477
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+++G + ++LL+ ++G YV+LSN YAS+GKW++ IR M+E V KEPG S +
Sbjct: 478 DVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWV 537
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E++ +H F D HP+RE++ KK++EL K +GY P VL+D+++ +KE L
Sbjct: 538 ELDQIVHTFHASDHTHPRREEVAKKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLG 597
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LA+ +GLI+T TTIRV+KNLR+C DCHS K ++ + R +I+RD+NRFH+
Sbjct: 598 HSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSFAKFVSRLYARTVILRDKNRFHNIVG 657
Query: 480 GTCSCGDYW 488
G CSCGDYW
Sbjct: 658 GVCSCGDYW 666
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 166/384 (43%), Gaps = 73/384 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+ +H ++K + R +L+ LY KC DA ++FDEMP+
Sbjct: 108 EGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQ-------------- 153
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
K+ V WTAMI + G AL+LF EM R + PN T
Sbjct: 154 ------------------KNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFA 195
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L++C E GR IHS K + + VG +L++MY++ G I A VF + ER
Sbjct: 196 TILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPER 255
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++I+G A G EA+++FR++ +G+ VT+ VL A S ++ G ++
Sbjct: 256 DVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVH 315
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGR-----------PE------------------- 270
+ R G + ++D+ S+ G PE
Sbjct: 316 SHVLRS-GQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMA 374
Query: 271 -EAYDFITNM----KIAPDHIMLGSLLSACKIHGKLQ-LGEQIAKRLLDCRSA---DSGT 321
E + M K+ PD I ++LS C HG+L+ +G +I +++ + D G
Sbjct: 375 REVLELFKLMREENKVKPDSITYLAVLSGCS-HGQLEDMGLEIFYNMVNGKDGIEPDIGH 433
Query: 322 YVLLSNAYASSGKWKEAVQIRAKM 345
Y + + +G+ +EA KM
Sbjct: 434 YGCVVDLLGRAGRVEEAFDFIKKM 457
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/483 (38%), Positives = 282/483 (58%), Gaps = 4/483 (0%)
Query: 9 VLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMINCYVEHGL 65
+L+ R N T L++ G CG Q+ + N DV + +++ Y
Sbjct: 152 MLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQ 211
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
++ A VF R+ K+ V W A+I G R + L F EMQR+ T + SA
Sbjct: 212 MDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSA 271
Query: 126 CSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTY 185
+++GALE GRW+H+++ K L VG ++ MY++ G + A +VF+ M +RD+ T+
Sbjct: 272 FARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTW 331
Query: 186 NSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR 245
N+++ LA +G EAV F E+ GI+ ++TF+ VL ACSHGGLV G F M +
Sbjct: 332 NTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFD-MMK 390
Query: 246 DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGE 305
DY ++P+I+HY VDLL R G +EA F+ M + P + G+LL AC++H ++G+
Sbjct: 391 DYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQ 450
Query: 306 QIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEI 365
A + + D+G VLL N YAS+GKW +A ++R MK GV+KEP CS +++ N +
Sbjct: 451 YAADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSV 510
Query: 366 HEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLA 425
H F+ D HP+ IY+ +E+ +K GY P+T VL I + E+E L HSE++A
Sbjct: 511 HMFVADDDTHPKSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIA 570
Query: 426 ICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCG 485
+ + LI+ +IR++KN+R+C DCHS K ++ + KR+I+VRD NRFHHF G+CSCG
Sbjct: 571 LAFALINMPAGASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCG 630
Query: 486 DYW 488
DYW
Sbjct: 631 DYW 633
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 94/188 (50%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D +I+ Y + G V +A VF ++ +D V WT +I G +N A A+ L +M
Sbjct: 94 DAFLLNSLIHMYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDML 153
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
R RPN T +L A G +G +H+ K+ D + VG AL++MY+RC +D
Sbjct: 154 RARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMD 213
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A+ VF+ + ++ ++N+LIAG A + F EM G T T+ + +A +
Sbjct: 214 MAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFA 273
Query: 229 HGGLVDLG 236
G ++ G
Sbjct: 274 RIGALEQG 281
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 120/253 (47%), Gaps = 8/253 (3%)
Query: 99 RALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALI 158
R LDL + + P +++AC+Q L R IH+++ + + + + +LI
Sbjct: 46 RELDL---LHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLI 102
Query: 159 NMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKV 218
+MY +CG + A VF++M RDV ++ LIAG A + EA+ + +M+ RP
Sbjct: 103 HMYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGF 162
Query: 219 TFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITN 278
TF +L A G +G E ++ Y + + ++D+ +R + + A + +
Sbjct: 163 TFTSLLKATGACGGCSIG-EQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAI-MVFD 220
Query: 279 MKIAPDHIMLGSLLS--ACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWK 336
++ + + +L++ A K G+ L + A+ + A TY + +A+A G +
Sbjct: 221 RLVSKNEVSWNALIAGFARKADGETTL-MKFAEMQRNGFGATHFTYSSMFSAFARIGALE 279
Query: 337 EAVQIRAKMKEAG 349
+ + A + ++G
Sbjct: 280 QGRWVHAHLIKSG 292
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 87/198 (43%), Gaps = 37/198 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR +H ++K G + ++ +Y K G DA ++FD M + D+V M+
Sbjct: 280 QGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDK-RDLVTWNTMLTAL 338
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++GL + A+ F E+++ ++ N++T +
Sbjct: 339 AQYGLGK-------------------------------EAVAHFEEIRKCGIQLNQITFL 367
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRI--DLNHIVGGALINMYSRCGDIDKAL-QVFEEM 177
VL+ACS G ++ G+ M + + +++H V + +++ R G + +AL VF+
Sbjct: 368 SVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYV--SFVDLLGRAGLLKEALIFVFKMP 425
Query: 178 KERDVTTYNSLIAGLAMH 195
E + +L+ MH
Sbjct: 426 MEPTAAVWGALLGACRMH 443
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/441 (41%), Positives = 272/441 (61%), Gaps = 1/441 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D+V +I+ Y E G V ++ ++F V+ KD V WT+MI+ +G + AL LF EMQ
Sbjct: 500 DLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQ 559
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+V+P+ V +V +L A L +L G+ +H ++ + + + +L++MYS CG +
Sbjct: 560 STDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLS 619
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
AL+VF +K +D+ + ++I MHG +A+++F+ M+ G+ P V+F+ +L ACS
Sbjct: 620 GALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACS 679
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H LV+ G M Y +EP EHY C+VDLL R G+ EEAY+FI +M + P ++
Sbjct: 680 HSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVW 739
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
SLL AC++H +L A RLL+ + G YVL+SN +A GKW A ++RA++ E
Sbjct: 740 CSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRARISER 799
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLE-GYSPSTEVVLHD 407
G++K+P CS IE+ N +H F D H E+I K+ E+ + ++ E GY+ T VLHD
Sbjct: 800 GLRKDPACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITERLRKEGGYTEDTRSVLHD 859
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
+ + EK L HSERLAI +GLI+T+P +R+ KNLRVC DCH KL++ + R I+
Sbjct: 860 VSEEEKVDVLHRHSERLAISFGLINTRPGMPLRIAKNLRVCGDCHEFTKLVSKLFDRDIV 919
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
VRD NRFHHF G+CSCGD+W
Sbjct: 920 VRDANRFHHFSGGSCSCGDFW 940
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 187/444 (42%), Gaps = 107/444 (24%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G E+HG +K GL + L+ +Y KCG AM++F+ M +
Sbjct: 183 GCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDG-------------- 228
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+D W +MI G ++NG +ALDLFR MQR + N T V
Sbjct: 229 -----------------RDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVG 271
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL C++L L LGR +H+ + K ++N I AL+ MY++CG +D AL+VF E+ E+D
Sbjct: 272 VLQVCTELAQLNLGRELHAALLKSGSEVN-IQCNALLVMYTKCGRVDSALRVFREIDEKD 330
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG----- 236
++NS+++ +G EA+E EM+ G +P V + +A H G + G
Sbjct: 331 YISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHA 390
Query: 237 FEIFQSMTRDYGIEPQI-----------------------EH--YGCIVDLLSRVGRPEE 271
+ I Q + D + + +H + I+ ++ R E
Sbjct: 391 YAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIE 450
Query: 272 AYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQ--------------IAKRLLD- 313
A + + I D +M+GS+L AC + L +Q + R++D
Sbjct: 451 ALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGLLDLVVKNRIIDI 510
Query: 314 ----------------CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP--- 354
D T+ + N YA+SG EA+ + A+M+ VQ +
Sbjct: 511 YGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVAL 570
Query: 355 --------GCSSIEVNNEIHEFIL 370
G SS+ E+H F++
Sbjct: 571 VSILGAIGGLSSLAKGKEVHGFLI 594
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 144/268 (53%), Gaps = 9/268 (3%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D +++ Y++ +E + VF R+++KD + WT +I ++ AL++FRE
Sbjct: 399 SDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREA 458
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
Q++ ++ + + I +L ACS L + L + +H Y ++ + L+ +V +I++Y CG++
Sbjct: 459 QKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGL-LDLVVKNRIIDIYGECGEV 517
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+L++FE ++++D+ T+ S+I A G EA+ +F EM + ++P V V +L A
Sbjct: 518 YHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAI 577
Query: 228 SHGGLVDL--GFEIFQSMT-RDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPD 284
GGL L G E+ + R++ +E I +VD+ S G A +K D
Sbjct: 578 --GGLSSLAKGKEVHGFLIRRNFHMEEAI--VSSLVDMYSGCGSLSGALKVFNAVK-CKD 632
Query: 285 HIMLGSLLSACKIHGKLQLGEQIAKRLL 312
++ ++++A +HG + + KR+L
Sbjct: 633 MVLWTAMINATGMHGHGKQAIDLFKRML 660
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 182/441 (41%), Gaps = 114/441 (25%)
Query: 1 EGREIHGQVLKLGLRSNRSTRL--KLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMIN 58
+G ++H + G L KL+ +YGKCG DA LFD M
Sbjct: 76 QGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGM-------------- 121
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ---RDNVRPN 115
++ VFS W A+I + +G AL ++R M+ V P+
Sbjct: 122 ---------SSRTVFS---------WNALIGAYLSSGSACEALGVYRAMRLSAASGVAPD 163
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
T+ VL A G G +H KH +D + V ALI MY++CG +D A++VFE
Sbjct: 164 GCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFE 223
Query: 176 EMKE-RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
M + RDV ++NS+I+G +G ++A+++FR M + T VGVL C+ ++
Sbjct: 224 LMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLN 283
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE------------------------ 270
LG E+ ++ + G E I+ +V + ++ GR +
Sbjct: 284 LGRELHAALLKS-GSEVNIQCNALLV-MYTKCGRVDSALRVFREIDEKDYISWNSMLSCY 341
Query: 271 -------EAYDFITNM---KIAPDHIM----------LGSLLSACKIHG-----KLQLGE 305
EA +FI+ M PDH LG LL+ ++H +L
Sbjct: 342 VQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDT 401
Query: 306 QIAKRLLD----CRSADSGTYVL-------------LSNAYASSGKWKEAVQIRAKMKEA 348
Q+ L+D CR + +V + YA S + EA++I + ++
Sbjct: 402 QVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKE 461
Query: 349 GVQKEP--------GCSSIEV 361
G++ +P CS +E
Sbjct: 462 GIKVDPMMIGSILEACSGLET 482
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 90/198 (45%), Gaps = 36/198 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+E+HG +++ + LV++Y CG A+++F+ + +C D+V T MIN
Sbjct: 585 KGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAV-KCKDMVLWTAMINAT 643
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG +G+ +A+DLF+ M + V P+ V+ +
Sbjct: 644 GMHG-----------------------------HGK--QAIDLFKRMLQTGVTPDHVSFL 672
Query: 121 CVLSACSQLGALELGR-WIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM-- 177
+L ACS + G+ ++ M +R++ ++++ R G ++A + + M
Sbjct: 673 ALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPL 732
Query: 178 KERDVTTYNSLIAGLAMH 195
K + V + SL+ +H
Sbjct: 733 KPKSV-VWCSLLGACRVH 749
>gi|297848728|ref|XP_002892245.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338087|gb|EFH68504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 664
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 303/522 (58%), Gaps = 37/522 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDE------------------ 43
GR +H LK + + R+ LV++Y K G+ A Q+F+E
Sbjct: 145 GRALHAATLKNFVDCDSFVRVSLVDMYAKTGQLNHAFQVFEETPDRIKKESILLWNVLVN 204
Query: 44 -----------------MPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTA 86
MPE N ST +I YV++G + A ++F + K+ V WT
Sbjct: 205 GYCRAKDMQMATTLFRSMPERNSGSWST-LIKGYVDNGELNRAKQLFELMPEKNVVSWTT 263
Query: 87 MIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHR 146
+I+G + G+ A+ + EM ++PNE T+ VLSACS+ GAL G IH Y+ +
Sbjct: 264 LINGFSQTGDYETAISTYFEMLEKGLKPNEYTVAAVLSACSKSGALGSGIRIHGYILDNG 323
Query: 147 IDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
I L+ +G +L++MY++CG++D A VF M +D+ ++ ++I G A+HGR +A++ FR
Sbjct: 324 IKLDRAIGTSLLDMYAKCGEVDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFR 383
Query: 207 EMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRV 266
+M+ G +P +V F+ VL AC + G VDLG F SM DY IEP ++HY +VDLL R
Sbjct: 384 QMMYSGEKPDEVVFLAVLTACLNSGEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRA 443
Query: 267 GRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLS 326
G+ +EA++ + M I PD +L ACK H K + + + LL+ G+Y+ L
Sbjct: 444 GKLDEAHELVEYMPINPDLTTWAALYRACKAH-KSNRTDIVLQNLLELDPELRGSYIFLD 502
Query: 327 NAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQ 386
+A+ GK+++ + R +++ ++ GCS IE++ ++++F D H Q ++I K++
Sbjct: 503 KTHAAKGKYQDVEKRRLSLQKKVKERSMGCSYIELDCQLNKFAADDYTHKQAQEIRLKLE 562
Query: 387 ELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLR 446
+ + GY P + +HDIE+ EKE IHSE+LA+ GL+ T P TTIR++KNLR
Sbjct: 563 GIISLAIERGYIPGADWSIHDIEEEEKESVTGIHSEKLALTLGLLRTAPGTTIRIIKNLR 622
Query: 447 VCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
+C DCHS++K ++ I++R I++RD +FHHF++G+CSCGDYW
Sbjct: 623 ICGDCHSLMKYVSKISQRGILLRDARQFHHFKDGSCSCGDYW 664
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 126/290 (43%), Gaps = 17/290 (5%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
+ +F + ++ + A+I GL N ++ F M V+P+ +T VL + S+
Sbjct: 79 SLSIFRNSEERNPFVFNALIRGLTENARFECSVRHFILMLTLGVKPDRLTFPFVLKSNSK 138
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER----DVTT 184
LG LGR +H+ K+ +D + V +L++MY++ G ++ A QVFEE +R +
Sbjct: 139 LGFRWLGRALHAATLKNFVDCDSFVRVSLVDMYAKTGQLNHAFQVFEETPDRIKKESILL 198
Query: 185 YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT 244
+N L+ G A +FR M + G ++ G ++ ++F+ M
Sbjct: 199 WNVLVNGYCRAKDMQMATTLFRSMPERNSGSWSTLIKGYVD----NGELNRAKQLFELMP 254
Query: 245 RDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKL 301
E + + +++ S+ G E A M + P+ + ++LSAC G L
Sbjct: 255 -----EKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTVAAVLSACSKSGAL 309
Query: 302 QLGEQIAKRLLDCR-SADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
G +I +LD D L + YA G+ A + + M +
Sbjct: 310 GSGIRIHGYILDNGIKLDRAIGTSLLDMYAKCGEVDCAATVFSNMNHKDI 359
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 113/240 (47%), Gaps = 11/240 (4%)
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
P+E + ++ C +L L +H+++ + + L+ V L++ S D +L +
Sbjct: 27 PDESHFISLIHTCKDTVSLRL---VHAHILRRGV-LSSRVAAQLVSCSSLLKSPDYSLSI 82
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV 233
F +ER+ +N+LI GL + R +V F M+ G++P ++TF VL + S G
Sbjct: 83 FRNSEERNPFVFNALIRGLTENARFECSVRHFILMLTLGVKPDRLTFPFVLKSNSKLGFR 142
Query: 234 DLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFI--TNMKIAPDHIMLGSL 291
LG + + +++ ++ +VD+ ++ G+ A+ T +I + I+L ++
Sbjct: 143 WLGRALHAATLKNF-VDCDSFVRVSLVDMYAKTGQLNHAFQVFEETPDRIKKESILLWNV 201
Query: 292 LSACKIHGK-LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
L K +Q+ + + + + +SG++ L Y +G+ A Q+ M E V
Sbjct: 202 LVNGYCRAKDMQMATTLFRSMPE---RNSGSWSTLIKGYVDNGELNRAKQLFELMPEKNV 258
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/488 (40%), Positives = 291/488 (59%), Gaps = 34/488 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR IHG ++K GL S +++ L+ +Y +CG
Sbjct: 297 GRLIHGLIVKAGLESAVASQTSLLTMYYRCG----------------------------- 327
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
LV+++ +VF + + V WT++I GLV+NG AL FR+M R ++ PN T+
Sbjct: 328 ---LVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSS 384
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL ACS L LE G+ IH+ + K +D++ VG ALI+ Y +CG + A VF + E D
Sbjct: 385 VLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVD 444
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V + NS+I A +G EA+++F M + G+ P VT++GVL+AC++ GL++ G IF
Sbjct: 445 VVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFS 504
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
S IE +HY C+VDLL R GR +EA I + I+ D ++ +LLSAC+IHG +
Sbjct: 505 SARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNIS-DVVIWRTLLSACRIHGDV 563
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++ +++ R++D D GT+VLLSN YAS+G W + +++++ M+E ++K P S ++V
Sbjct: 564 EMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDV 623
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
EIH F+ GD HP I +K++EL + VK GY P T VL D+++ +K +L HS
Sbjct: 624 EREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHS 683
Query: 422 ERLAICYGLI-STKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
E+LA+ + L S TTIR++KNLRVC DCH+ +K ++ I R II RD RFHHF NG
Sbjct: 684 EKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNG 743
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 744 LCSCGDYW 751
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 146/306 (47%), Gaps = 40/306 (13%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
++V + +++ Y + G + +A V +V KD V +TA+I G +GE +L +FR M
Sbjct: 210 SNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNM 269
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ + NE T+ VL C L L GR IH + K ++ +L+ MY RCG +
Sbjct: 270 TKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLV 329
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
D +L+VF++ + T+ S+I GL +GR A+ FR+M+ I P T VL AC
Sbjct: 330 DDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRAC 389
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHY--GCIVDLLSRVGRPEEAYDFITNMKIAPDH 285
S +++ G +I ++ +G++ I+ Y ++D + G E
Sbjct: 390 SSLAMLEQGKQI-HAIVMKFGLD--IDKYVGAALIDFYGKCGSTE--------------- 431
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
++ +G L+ +D S +S Y +YA +G EA+Q+ + M
Sbjct: 432 ------IARSVFNGLLE---------VDVVSVNSMIY-----SYAQNGFGHEALQLFSGM 471
Query: 346 KEAGVQ 351
K+ G++
Sbjct: 472 KDTGLE 477
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 88/167 (52%), Gaps = 7/167 (4%)
Query: 149 LNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM 208
+H +G LI+ Y +CG + A +VF+E+ R + +NS+IA +GRS EA+++++ M
Sbjct: 108 FHHSLGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRM 167
Query: 209 INQGIRPTKVTFVGVLNACSHGGLVDLGFEIF-QSMTRDYGIEPQIEHYGCIVDLLSRVG 267
+ GI P + TF V A S GLV G QS+ G+ + +VD+ ++ G
Sbjct: 168 VPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGV-SNVFVGSALVDMYAKFG 226
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK----LQLGEQIAKR 310
+ +A +++ + D ++ +L+ HG+ LQ+ + K+
Sbjct: 227 KMRDA-RLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKK 272
>gi|15226158|ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101013|sp|P93011.1|PP182_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33760
gi|1707020|gb|AAC69141.1| hypothetical protein [Arabidopsis thaliana]
gi|330253787|gb|AEC08881.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/446 (42%), Positives = 277/446 (62%), Gaps = 9/446 (2%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D ++ Y + G +E A +VF R+ K V W +++ G +NG A+ +F +M+
Sbjct: 141 DTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMR 200
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
P+ T V +LSAC+Q GA+ LG W+H Y+ +DLN +G ALIN+YSRCGD+
Sbjct: 201 ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVG 260
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ-GIRPTKVTFVGVLNAC 227
KA +VF++MKE +V + ++I+ HG +AVE+F +M + G P VTFV VL+AC
Sbjct: 261 KAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSAC 320
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFI-----TNMKIA 282
+H GLV+ G +++ MT+ Y + P +EH+ C+VD+L R G +EAY FI T A
Sbjct: 321 AHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATA 380
Query: 283 PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIR 342
P + ++L ACK+H LG +IAKRL+ + G +V+LSN YA SGK E IR
Sbjct: 381 P--ALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIR 438
Query: 343 AKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTE 402
M ++K+ G S IEV N+ + F +GD H + +IY+ ++ L K GY+P +E
Sbjct: 439 DGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSE 498
Query: 403 VVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANIT 462
V+H +E+ EKE+AL HSE+LA+ +GL+ T I +VKNLR+C DCHS K I+ ++
Sbjct: 499 EVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVD-VAITIVKNLRICEDCHSAFKYISIVS 557
Query: 463 KRKIIVRDRNRFHHFENGTCSCGDYW 488
R+I VRD+ RFHHF+NG+CSC DYW
Sbjct: 558 NRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 145/282 (51%), Gaps = 10/282 (3%)
Query: 72 VFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGA 131
+F V + D + ++I + + +R M NV P+ T V+ +C+ L A
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSA 122
Query: 132 LELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAG 191
L +G+ +H + L+ V AL+ YS+CGD++ A QVF+ M E+ + +NSL++G
Sbjct: 123 LRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSG 182
Query: 192 LAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEP 251
+G + EA+++F +M G P TFV +L+AC+ G V LG + Q + + G++
Sbjct: 183 FEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISE-GLDL 241
Query: 252 QIEHYGCIVDLLSR---VGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIA 308
++ +++L SR VG+ E +D + +A +++SA HG Q ++
Sbjct: 242 NVKLGTALINLYSRCGDVGKAREVFDKMKETNVAA----WTAMISAYGTHGYGQQAVELF 297
Query: 309 KRLL-DCRS-ADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
++ DC ++ T+V + +A A +G +E + +M ++
Sbjct: 298 NKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKS 339
>gi|125578382|gb|EAZ19528.1| hypothetical protein OsJ_35094 [Oryza sativa Japonica Group]
Length = 591
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/419 (42%), Positives = 261/419 (62%), Gaps = 9/419 (2%)
Query: 70 FEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQL 129
++R++ +D C T+ D + L+LF M + PNE+T+V V+ AC +L
Sbjct: 182 LSAYARLRARDVACATSAADAI---------LELFVRMLSLAIEPNEITLVAVIGACGEL 232
Query: 130 GALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLI 189
GA+ G W H+Y K R+ +N IV AL+ MY+ CG +D A QVF +RD YN+++
Sbjct: 233 GAVSHGVWAHTYAVKRRLAVNCIVATALVEMYAGCGRLDLAEQVFAAASDRDTRCYNAML 292
Query: 190 AGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGI 249
GLA+HG A+ + M G+ VT + V+ AC+H GLVD G + F M ++GI
Sbjct: 293 HGLAVHGHGRAALSLLDRMHGAGVPVDGVTVLSVMCACAHAGLVDEGLDYFDRMEIEFGI 352
Query: 250 EPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAK 309
EP+IEHYGC++D+LSR GR A I M I P+ + SL+ AC IHGKL+LGE++
Sbjct: 353 EPRIEHYGCMIDMLSRAGRLNNAEKLIHEMLIVPNAAIYRSLIRACGIHGKLELGEKMIA 412
Query: 310 RLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFI 369
L+ DSG +VL+SN YA + +W++A + R +MK G+ K PG S +++N +HEF+
Sbjct: 413 ELMRLEPDDSGNHVLISNFYARTNRWEDAKKARKEMKSMGIDKNPGSSLVDINGVLHEFL 472
Query: 370 LGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYG 429
+GD HP ++IY ++E++ + G ST L D+E+ +K L+ HSERLAI +
Sbjct: 473 VGDKTHPASKEIYTMVEEIETRLIECGRRSSTSSALFDVEEEDKADTLSYHSERLAIAFA 532
Query: 430 LISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
LI++ P IR++KNLRVC DCH KL++ + R+I++RDR RFHHF +G CSCGD+W
Sbjct: 533 LIASNPGAPIRIIKNLRVCADCHESAKLVSRVYGREIVMRDRTRFHHFRDGVCSCGDFW 591
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 25/224 (11%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKD------AMQLFDEMPECNDVVASTVMI 57
E+ ++L L + N T LV + G CGE A + + + +T ++
Sbjct: 205 ELFVRMLSLAIEPNEIT---LVAVIGACGELGAVSHGVWAHTYAVKRRLAVNCIVATALV 261
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
Y G ++ A +VF+ +DT C+ AM+ GL +G AL L M V + V
Sbjct: 262 EMYAGCGRLDLAEQVFAAASDRDTRCYNAMLHGLAVHGHGRAALSLLDRMHGAGVPVDGV 321
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRID------LNHIVGGALINMYSRCGDIDKAL 171
T++ V+ AC+ G ++ G Y + I+ + H G +I+M SR G ++ A
Sbjct: 322 TVLSVMCACAHAGLVDEGL---DYFDRMEIEFGIEPRIEHY--GCMIDMLSRAGRLNNAE 376
Query: 172 QVFEEMK-ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIR 214
++ EM + Y SLI +HG+ +E+ +MI + +R
Sbjct: 377 KLIHEMLIVPNAAIYRSLIRACGIHGK----LELGEKMIAELMR 416
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/483 (38%), Positives = 282/483 (58%), Gaps = 4/483 (0%)
Query: 9 VLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMINCYVEHGL 65
+L+ R N T L++ G CG Q+ + N DV + +++ Y
Sbjct: 49 MLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQ 108
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
++ A VF R+ K+ V W A+I G R + L F EMQR+ T + SA
Sbjct: 109 MDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSA 168
Query: 126 CSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTY 185
+++GALE GRW+H+++ K L VG ++ MY++ G + A +VF+ M +RD+ T+
Sbjct: 169 FARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTW 228
Query: 186 NSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR 245
N+++ LA +G EAV F E+ GI+ ++TF+ VL ACSHGGLV G F M +
Sbjct: 229 NTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFD-MMK 287
Query: 246 DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGE 305
DY ++P+I+HY VDLL R G +EA F+ M + P + G+LL AC++H ++G+
Sbjct: 288 DYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQ 347
Query: 306 QIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEI 365
A + + D+G VLL N YAS+GKW +A ++R MK GV+KEP CS +++ N +
Sbjct: 348 YAADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSV 407
Query: 366 HEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLA 425
H F+ D HP+ IY+ +E+ +K GY P+T VL I + E+E L HSE++A
Sbjct: 408 HMFVADDDTHPKSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIA 467
Query: 426 ICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCG 485
+ + LI+ +IR++KN+R+C DCHS K ++ + KR+I+VRD NRFHHF G+CSCG
Sbjct: 468 LAFALINMPAGASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCG 527
Query: 486 DYW 488
DYW
Sbjct: 528 DYW 530
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 90/177 (50%)
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
Y + G V +A VF ++ +D V WT +I G +N A A+ L +M R RPN T
Sbjct: 2 YCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTF 61
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+L A G +G +H+ K+ D + VG AL++MY+RC +D A+ VF+ +
Sbjct: 62 TSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVS 121
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
++ ++N+LIAG A + F EM G T T+ + +A + G ++ G
Sbjct: 122 KNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQG 178
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 91/192 (47%), Gaps = 5/192 (2%)
Query: 160 MYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVT 219
MY +CG + A VF++M RDV ++ LIAG A + EA+ + +M+ RP T
Sbjct: 1 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60
Query: 220 FVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM 279
F +L A G +G E ++ Y + + ++D+ +R + + A + +
Sbjct: 61 FTSLLKATGACGGCSIG-EQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAI-MVFDR 118
Query: 280 KIAPDHIMLGSLLS--ACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKE 337
++ + + +L++ A K G+ L + A+ + A TY + +A+A G ++
Sbjct: 119 LVSKNEVSWNALIAGFARKADGETTL-MKFAEMQRNGFGATHFTYSSMFSAFARIGALEQ 177
Query: 338 AVQIRAKMKEAG 349
+ A + ++G
Sbjct: 178 GRWVHAHLIKSG 189
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 87/198 (43%), Gaps = 37/198 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR +H ++K G + ++ +Y K G DA ++FD M + D+V M+
Sbjct: 177 QGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDK-RDLVTWNTMLTAL 235
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++GL + A+ F E+++ ++ N++T +
Sbjct: 236 AQYGLGK-------------------------------EAVAHFEEIRKCGIQLNQITFL 264
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRI--DLNHIVGGALINMYSRCGDIDKAL-QVFEEM 177
VL+ACS G ++ G+ M + + +++H V + +++ R G + +AL VF+
Sbjct: 265 SVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYV--SFVDLLGRAGLLKEALIFVFKMP 322
Query: 178 KERDVTTYNSLIAGLAMH 195
E + +L+ MH
Sbjct: 323 MEPTAAVWGALLGACRMH 340
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/488 (38%), Positives = 286/488 (58%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G++IH +V G ++ S LV LY +CG K+
Sbjct: 464 QGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKE------------------------ 499
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
AF +F ++ KD + W M+ G ++G AL++F +M + V+ N T V
Sbjct: 500 --------AFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFV 551
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+SA + L ++ G+ IH+ + K V ALI++Y +CG I+ A F EM ER
Sbjct: 552 SSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSER 611
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+ ++N++I + HG +EA+++F +M +G++P VTF+GVL ACSH GLV+ G F
Sbjct: 612 NHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYF 671
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+SM+ ++GI P+ +HY C+VD+L R G+ + A F+ M ++ + ++ +LLSAC++H
Sbjct: 672 KSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKN 731
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+++GE AK LL+ DS +YVLLSNAYA +GKW +R MK+ GV+KEPG S IE
Sbjct: 732 IEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIE 791
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
V N +H F +GD HP QIYK + +L + GY + H+ E +K+ +H
Sbjct: 792 VKNVVHAFFVGDRLHPLAHQIYKYLADLDDRLAKIGYIQGNYFLFHEKEKEQKDPTAFVH 851
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LA+ +GL+S P +RV+KNLRVCNDCH+ +K + + R+I++RD RFHHF NG
Sbjct: 852 SEKLAVAFGLMSLPPSMPLRVIKNLRVCNDCHTWMKFTSEVMGREIVLRDVYRFHHFNNG 911
Query: 481 TCSCGDYW 488
CSCGD+W
Sbjct: 912 NCSCGDFW 919
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 177/376 (47%), Gaps = 68/376 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR +H QV K G S L+ LY + G A ++F EMP C+ V +T +I+ +
Sbjct: 161 QGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNT-LISRH 219
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ G NGE AL++F EM+ P+ VTI
Sbjct: 220 AQCG-----------------------------NGE--SALEIFEEMRLSGWTPDCVTIA 248
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L+AC+ +G L G+ +HSY+ K + ++I+ G+L+++Y +CG I +AL++F+
Sbjct: 249 SLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRT 308
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+V +N ++ ++ ++F +M+ G+RP + T+ +L C++ G ++LG +I
Sbjct: 309 NVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQI- 367
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPE------------------------------ 270
++ G E + G ++D+ S+ G +
Sbjct: 368 HLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFC 427
Query: 271 -EAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRL-LDCRSADSGTYVLL 325
EA + +M+ I PD+I L S +SAC ++ G+QI R+ + SAD + L
Sbjct: 428 KEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNAL 487
Query: 326 SNAYASSGKWKEAVQI 341
N YA G+ KEA +
Sbjct: 488 VNLYARCGRSKEAFSL 503
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 167/373 (44%), Gaps = 74/373 (19%)
Query: 17 NRSTRLKLVELYGKCGEFKDAMQLFDEM------PEC----------------------- 47
+R T L+ + +CG + A+++F+EM P+C
Sbjct: 208 DRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLH 267
Query: 48 ---------NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMA 98
D + +++ YV+ G++ A E+F + V W M+ + ++A
Sbjct: 268 SYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLA 327
Query: 99 RALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALI 158
++ DLF +M VRPNE T C+L C+ G + LG IH K + + V G LI
Sbjct: 328 KSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLI 387
Query: 159 NMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKV 218
+MYS+ G +DKA ++ E ++ +DV ++ S+IAG H EA+E F++M GI P +
Sbjct: 388 DMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNI 447
Query: 219 TFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITN 278
++AC+ + G +I S G + + +V+L +R GR +EA+
Sbjct: 448 GLASAISACAGIKAMRQGQQI-HSRVYVSGYSADVSIWNALVNLYARCGRSKEAF----- 501
Query: 279 MKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEA 338
SL A + K+ T+ + + +A SG ++EA
Sbjct: 502 -----------SLFEAIEHKDKI-------------------TWNGMVSGFAQSGLYEEA 531
Query: 339 VQIRAKMKEAGVQ 351
+++ KM +AGV+
Sbjct: 532 LEVFIKMYQAGVK 544
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 151/330 (45%), Gaps = 40/330 (12%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D +A ++I+ Y + GLV+ A VF ++ +D V W AM+ G RNG A+ L+ +M
Sbjct: 76 DRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMH 135
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
V P + VLSAC++ E GR +H+ + K +VG ALI +Y R G +
Sbjct: 136 CSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLS 195
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +VF EM D T+N+LI+ A G A+E+F EM G P VT +L AC+
Sbjct: 196 LAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACA 255
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---------------- 272
G ++ G ++ + + G+ P G ++DL + G EA
Sbjct: 256 SIGDLNKGKQLHSYLLKA-GMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWN 314
Query: 273 ---------------YDFITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDC 314
+D M A P+ LL C G++ LGEQI LL
Sbjct: 315 LMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQI--HLLSI 372
Query: 315 RSA-DSGTYV--LLSNAYASSGKWKEAVQI 341
++ +S YV +L + Y+ G +A +I
Sbjct: 373 KTGFESDMYVSGVLIDMYSKYGWLDKARRI 402
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 155/297 (52%), Gaps = 9/297 (3%)
Query: 8 QVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQ---LFDEMPECNDVVASTVMINCYVEHG 64
Q++ G+R N T L+ GE Q L + +D+ S V+I+ Y ++G
Sbjct: 335 QMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYG 394
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
++ A + ++ KD V WT+MI G V++ AL+ F++MQ + P+ + + +S
Sbjct: 395 WLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAIS 454
Query: 125 ACSQLGALELGRWIHS--YMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
AC+ + A+ G+ IHS Y+ + D++ + AL+N+Y+RCG +A +FE ++ +D
Sbjct: 455 ACAGIKAMRQGQQIHSRVYVSGYSADVS--IWNALVNLYARCGRSKEAFSLFEAIEHKDK 512
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
T+N +++G A G EA+E+F +M G++ TFV ++A ++ + G +I +
Sbjct: 513 ITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHAT 572
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+ + G + E ++ L + G E+A M +H+ +++++C HG
Sbjct: 573 VIKT-GCTSETEVANALISLYGKCGSIEDAKMQFFEMS-ERNHVSWNTIITSCSQHG 627
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/446 (41%), Positives = 276/446 (61%), Gaps = 3/446 (0%)
Query: 46 ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
+ D++A M++ Y + ++ A +VF + +D V W +I G ++NG A+ ++
Sbjct: 301 DVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYN 360
Query: 106 EMQ-RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC 164
+M + ++P + T V VL A S LG L+ G +H+ K ++L+ V LI++Y++C
Sbjct: 361 DMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKC 420
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL 224
G + +A+ +FE M R +N++IAGL +HG +A+ +F +M + I+P VTFV +L
Sbjct: 421 GKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLL 480
Query: 225 NACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPD 284
ACSH GLVD G F M YGI P +HY C+VD+L R G+ +EA++FI +M I PD
Sbjct: 481 AACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPD 540
Query: 285 HIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAK 344
+ G+LL AC+IHG +++G+ ++ L + + G YVL+SN YA GKW +R+
Sbjct: 541 SAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSL 600
Query: 345 MKEAGVQKEPGCSSIEVNNEIHEFILGDIR--HPQREQIYKKMQELKQIVKLEGYSPSTE 402
++ +QK PG SS+EV + F G HPQ E+I + + +L +K GY P
Sbjct: 601 VRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSAGYVPDYS 660
Query: 403 VVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANIT 462
VL D+E+ EKE L HSERLAI +G+I+T P T + + KNLRVC DCHS K I+ IT
Sbjct: 661 FVLQDVEEDEKEQILNNHSERLAIAFGIINTPPGTPLHIYKNLRVCGDCHSATKYISKIT 720
Query: 463 KRKIIVRDRNRFHHFENGTCSCGDYW 488
+R+IIVRD NRFHHF++G CSCGD+W
Sbjct: 721 EREIIVRDANRFHHFKDGHCSCGDFW 746
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 145/308 (47%), Gaps = 9/308 (2%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
+V AS +++ Y+ G V A+ VF + +D W AM+ GL RN A A+ L M
Sbjct: 101 NVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMV 160
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ V + VT+ VL C LG L +H Y KH + V ALI++Y + G +
Sbjct: 161 GEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLT 220
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+A VF M RD+ T+NS+I+ G+ AVE+F M+ G+ P +T V + +A +
Sbjct: 221 EAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVA 280
Query: 229 HGGLVDLGFEIFQSMTRDYGIE-PQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDH-- 285
G +LG + R G + I +VD+ +++ + + A N+ PD
Sbjct: 281 QCG-DELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNL---PDRDV 336
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADS--GTYVLLSNAYASSGKWKEAVQIRA 343
+ +L++ +G +I + + GT+V + AY+ G ++ +++ A
Sbjct: 337 VSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHA 396
Query: 344 KMKEAGVQ 351
+ G+
Sbjct: 397 LSIKTGLN 404
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 50/206 (24%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G +H +K GL + L++LY KCG+ +AM LF+ MP
Sbjct: 390 QGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPR-------------- 435
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ T W A+I GL +G A+AL LF +MQ++ ++P+ VT V
Sbjct: 436 ------------------RSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFV 477
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGG---------ALINMYSRCGDIDKAL 171
+L+ACS G ++ GR DL V G +++M R G +D+A
Sbjct: 478 SLLAACSHAGLVDQGRSF--------FDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAF 529
Query: 172 QVFEEMK-ERDVTTYNSLIAGLAMHG 196
+ + M + D + +L+ +HG
Sbjct: 530 EFIQSMPIKPDSAVWGALLGACRIHG 555
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/443 (41%), Positives = 271/443 (61%), Gaps = 6/443 (1%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+DV I Y++ G V A ++F + VK + W AM+ G +NG L+L+R M
Sbjct: 185 SDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNM 244
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ V P+ VT+V VLS+C+ LGA +G + + N + ALINMY+RCG++
Sbjct: 245 DMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNL 304
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
KA VF+ M ER + ++ ++I G MHG AV++F+EMI GI P FV VL+AC
Sbjct: 305 TKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSAC 364
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SH GL D G E F+ M R+Y +EP EHY C+VDLL R GR +EA I +M I PD +
Sbjct: 365 SHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAV 424
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
G+LL ACKIH ++L E +R+++ + G YVLLSN Y+++ K ++IR MKE
Sbjct: 425 WGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKE 484
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
++K+PGCS +E+ +H FI+GD H Q ++IY+ ++EL+ I+ E P + +
Sbjct: 485 KKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKD----N 540
Query: 408 IEDWEKE--WALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRK 465
E+ K+ + +HSE+LA+ +GL++T + ++KNLR+C DCH K+++ I R+
Sbjct: 541 REESNKDGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQ 600
Query: 466 IIVRDRNRFHHFENGTCSCGDYW 488
+ VRD RFHHF NG+CSC DYW
Sbjct: 601 LTVRDATRFHHFRNGSCSCKDYW 623
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 163/308 (52%), Gaps = 12/308 (3%)
Query: 54 TVMINCYVEHGLVENAFEVFSRV--KVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN 111
T +I+ Y + LV+NA +VF K TVC+ A++ G V N + + A+ LFR+M +
Sbjct: 88 TGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEG 147
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
V N VT++ ++ AC LELG +H K+ D + V I MY +CG ++ A
Sbjct: 148 VPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQ 207
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
++F+EM + + ++N++++G A +G + +E++R M G+ P VT VGVL++C++ G
Sbjct: 208 KLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLG 267
Query: 232 LVDLGFEI-FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLG- 289
+G E+ F+ + P + + ++++ +R G +A M P+ ++
Sbjct: 268 AQSVGHEVEFKIQASGFTSNPFLNN--ALINMYARCGNLTKAQAVFDGM---PERTLVSW 322
Query: 290 -SLLSACKIHGKLQLGEQIAKRLLDCRSADSGT-YVLLSNAYASSGKWKEAVQIRAKMKE 347
+++ +HG ++ Q+ K ++ GT +V + +A + +G + ++ KM +
Sbjct: 323 TAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEY-FKMMK 381
Query: 348 AGVQKEPG 355
Q EPG
Sbjct: 382 RNYQLEPG 389
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 121/302 (40%), Gaps = 40/302 (13%)
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W + L + + +AL L+ +M R RPN T L +C+ L LG H +
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEE-MKERDVTT-YNSLIAGLAMHGRSIEA 201
K V LI+MY + +D A +VFEE R +T YN+L++G + + EA
Sbjct: 77 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEA 136
Query: 202 VEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVD 261
V +FR+M +G+ VT +G++ AC ++LG + S T YG + + C +
Sbjct: 137 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCS-TLKYGFDSDVSVVNCFIT 195
Query: 262 LLSRVGRPEEAYDFITNMKIA----------------------------------PDHIM 287
+ + G A M + PD +
Sbjct: 196 MYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVT 255
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV--LLSNAYASSGKWKEAVQIRAKM 345
L +LS+C G +G ++ + + S ++ L N YA G +A + M
Sbjct: 256 LVGVLSSCANLGAQSVGHEVEFK-IQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGM 314
Query: 346 KE 347
E
Sbjct: 315 PE 316
>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
Length = 562
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/475 (38%), Positives = 289/475 (60%), Gaps = 8/475 (1%)
Query: 22 LKLVELYGKCGEFKD--------AMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVF 73
+ ++ CG +D A+ + + ++ + ++N YV G +E A +VF
Sbjct: 88 MTFTGVFNACGVIEDLEQGREIHALAMASGELKSSNAILENALLNMYVRCGSLEEARKVF 147
Query: 74 SRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALE 133
+ D WT+MI N E+ AL+LF M + + P VT+ VL+AC+ GAL+
Sbjct: 148 DTMDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLASVLNACACSGALK 207
Query: 134 LGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLA 193
+G+ IHS + + + AL++MY++CG ++ + +VF M+ R+ ++ ++IA LA
Sbjct: 208 VGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALA 267
Query: 194 MHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQI 253
HG+ EA+E+F+EM +G+ TF+ VL ACSH GL+ E F SM DY I P
Sbjct: 268 QHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTE 327
Query: 254 EHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
HY +D + R GR ++A + I +M P+ + +LL+AC+IH + + ++A+ L
Sbjct: 328 THYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNACRIHSQAERATKVAELLSK 387
Query: 314 CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDI 373
DS Y LL N YA++G++ + +++R M + G++K PG S IEV N++HEF+ GD
Sbjct: 388 LAPEDSMAYTLLGNVYAATGRYGDQMRVRKGMTDRGLKKVPGKSFIEVKNKVHEFVAGDR 447
Query: 374 RHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLIST 433
HP R++I ++++L ++ GY P+T+ VLH + + EKE + +HSE+LAI +GLI+T
Sbjct: 448 AHPSRDEILLELEKLGGRMREAGYVPNTKDVLHAVNEEEKEQLIGLHSEKLAIAFGLIAT 507
Query: 434 KPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
P T + +VKNLRVC+DCH+ K+IA I +R+I+VRD +RFHHFE+G CSC DYW
Sbjct: 508 PPGTPLLIVKNLRVCSDCHAATKVIAKIMRRRIVVRDTHRFHHFEDGQCSCKDYW 562
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 164/351 (46%), Gaps = 38/351 (10%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR IH ++ G + LV +Y KCG +A +F+
Sbjct: 3 EGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFN------------------ 44
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN-VRPNEVTI 119
G++E + V W+AMI +G AL LF M+ D V PN +T
Sbjct: 45 ---GILE-----------RTVVSWSAMIGAYALHGRGQEALLLFHRMRNDGRVEPNAMTF 90
Query: 120 VCVLSACSQLGALELGRWIHSY-MGKHRI-DLNHIVGGALINMYSRCGDIDKALQVFEEM 177
V +AC + LE GR IH+ M + N I+ AL+NMY RCG +++A +VF+ M
Sbjct: 91 TGVFNACGVIEDLEQGREIHALAMASGELKSSNAILENALLNMYVRCGSLEEARKVFDTM 150
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
D ++ S+I + +EA+E+F M +GI PT VT VLNAC+ G + +G
Sbjct: 151 DHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLASVLNACACSGALKVGK 210
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
+I + G + ++D+ ++ G E + T M+ + + ++++A
Sbjct: 211 QIHSRLDAS-GFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETR-NSVSWTAMIAALAQ 268
Query: 298 HGKLQLGEQIAKRL-LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
HG+ ++ K + L+ AD+ T++ + A + +G KE+++ M E
Sbjct: 269 HGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKESLEFFHSMVE 319
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 112/228 (49%), Gaps = 14/228 (6%)
Query: 132 LELGRWIHSYM---GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
+E GR IHS + G HR I L++MY++CG +D+A +F + ER V +++++
Sbjct: 1 MEEGRRIHSRLSLCGFHRAT---IAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAM 57
Query: 189 IAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSHGGLVDL--GFEIFQ-SMT 244
I A+HGR EA+ +F M N G + P +TF GV NAC G + DL G EI +M
Sbjct: 58 IGAYALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNAC--GVIEDLEQGREIHALAMA 115
Query: 245 RDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLG 304
++++ R G EEA M PD S+++AC + +L
Sbjct: 116 SGELKSSNAILENALLNMYVRCGSLEEARKVFDTMD-HPDAFSWTSMITACTENCELLEA 174
Query: 305 EQIAKRL-LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
++ R+ L+ S T + NA A SG K QI +++ +G
Sbjct: 175 LELFHRMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFH 222
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 98/231 (42%), Gaps = 9/231 (3%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G++IH ++ G S+ + L+++Y KCG + + ++F M E + V+ T MI
Sbjct: 209 GKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAM-ETRNSVSWTAMIAALA 267
Query: 62 EHGLVENAFEVFSRVK----VKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNE 116
+HG + A E+F + V D + ++ G + +L+ F M D + P E
Sbjct: 268 QHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTE 327
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
L + G L+ + M H L ++S+ K ++ +
Sbjct: 328 THYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNACRIHSQAERATKVAELLSK 387
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIR--PTKVTFVGVLN 225
+ D Y L A GR + + + + M ++G++ P K +F+ V N
Sbjct: 388 LAPEDSMAYTLLGNVYAATGRYGDQMRVRKGMTDRGLKKVPGK-SFIEVKN 437
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/440 (39%), Positives = 275/440 (62%), Gaps = 1/440 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+DV + +++ Y G ++ A VF +++ K+ V W A+I G R G+ L +F EM
Sbjct: 198 DDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEM 257
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
QR+ T V SA + +GALE G+W+H++M K L+ VG +++MY++ G +
Sbjct: 258 QRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSM 317
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A +VF+ + ++DV T+NS++ A +G EAV F EM G+ ++TF+ +L AC
Sbjct: 318 IDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTAC 377
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SHGGLV G + F M ++Y +EP+I+HY +VDLL R G +A FI M + P +
Sbjct: 378 SHGGLVKEGKQYFD-MMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAV 436
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
G+LL +C++H ++G+ A + + D+G VLL N YAS+G+W A ++R MK
Sbjct: 437 WGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKA 496
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
GV+KEP CS +E+ N +H F+ D HP+ E+IYKK +E+ ++ GY P+T+ VL
Sbjct: 497 TGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLH 556
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
+++ E++ L HSE++A+ + LI+ TIR++KN+R+C DCHS + I+ + KR+I+
Sbjct: 557 VDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIV 616
Query: 468 VRDRNRFHHFENGTCSCGDY 487
VRD NRFHHF +G+CSCGDY
Sbjct: 617 VRDTNRFHHFSSGSCSCGDY 636
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 140/308 (45%), Gaps = 9/308 (2%)
Query: 50 VVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
V +I+ Y + G V +A VF + +D WT++I G +N AL L M R
Sbjct: 99 VFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLR 158
Query: 110 DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDK 169
+PN T +L A + +G IH+ K+ + VG AL++MY+RCG +D
Sbjct: 159 GRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDM 218
Query: 170 ALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH 229
A+ VF++++ ++ ++N+LIAG A G + MF EM G T T+ V +A +
Sbjct: 219 AIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAG 278
Query: 230 GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLG 289
G ++ G + M + G I+D+ ++ G +A + D +
Sbjct: 279 IGALEQGKWVHAHMIKS-GERLSAFVGNTILDMYAKSGSMIDARKVFDRVD-KKDVVTWN 336
Query: 290 SLLSACKIHGKLQLGEQIAKRLLDCRSA----DSGTYVLLSNAYASSGKWKEAVQIRAKM 345
S+L+A +G LG + + R + T++ + A + G KE Q M
Sbjct: 337 SMLTAFAQYG---LGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMM 393
Query: 346 KEAGVQKE 353
KE ++ E
Sbjct: 394 KEYNLEPE 401
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 79/151 (52%), Gaps = 1/151 (0%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+++AC++ +L+ R IH+++ + + + +LI++Y +CG + A +VF+ M RD
Sbjct: 70 LITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARD 129
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++ SLIAG A + EA+ + M+ +P TF +L A +G +I
Sbjct: 130 MCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQI-H 188
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
++T Y + ++D+ +R GR + A
Sbjct: 189 ALTVKYDWHDDVYVGSALLDMYARCGRMDMA 219
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 89/198 (44%), Gaps = 37/198 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ +H ++K G R + ++++Y K G DA ++FD + + DVV M+ +
Sbjct: 284 QGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDK-KDVVTWNSMLTAF 342
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++GL A+ F EM++ V N++T +
Sbjct: 343 AQYGLGRE-------------------------------AVTHFEEMRKCGVHLNQITFL 371
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRI--DLNHIVGGALINMYSRCGDIDKALQ-VFEEM 177
+L+ACS G ++ G+ M ++ + +++H V ++++ R G ++ AL +F+
Sbjct: 372 SILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYV--TVVDLLGRAGLLNDALVFIFKMP 429
Query: 178 KERDVTTYNSLIAGLAMH 195
+ + +L+ MH
Sbjct: 430 MKPTAAVWGALLGSCRMH 447
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Glycine max]
Length = 1047
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/556 (36%), Positives = 296/556 (53%), Gaps = 69/556 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGE---------------------------- 33
G +IH QVLK G + N L+++Y K G+
Sbjct: 492 GEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQ 551
Query: 34 ---FKDAMQLFDEMPE--------------------------------------CNDVVA 52
F +A+ LF EM + +D+
Sbjct: 552 HEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSV 611
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
+++ Y G V +A+ F ++ KD + W ++I G ++G AL LF +M +
Sbjct: 612 GNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQ 671
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
N T +SA + + ++LG+ IH+ + K D V LI +Y++CG+ID A +
Sbjct: 672 EINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAER 731
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
F EM E++ ++N+++ G + HG +A+ +F +M G+ P VTFVGVL+ACSH GL
Sbjct: 732 QFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGL 791
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
VD G + FQSM +G+ P+ EHY C+VDLL R G A F+ M I PD ++ +LL
Sbjct: 792 VDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLL 851
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
SAC +H + +GE A LL+ DS TYVLLSN YA +GKW + R MK+ GV+K
Sbjct: 852 SACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKK 911
Query: 353 EPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE 412
EPG S IEVNN +H F GD +HP ++IY+ +++L ++ GY P T +L+D E +
Sbjct: 912 EPGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLRDLNELAAENGYIPQTNSLLNDAERRQ 971
Query: 413 KEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRN 472
K IHSE+LAI +GL+S T I V KNLRVC DCH+ IK ++ I+ R I+VRD
Sbjct: 972 KGPTQIIHSEKLAIAFGLLSLSSSTPIHVFKNLRVCGDCHNWIKYVSKISDRVIVVRDSY 1031
Query: 473 RFHHFENGTCSCGDYW 488
RFHHF+ G CSC DYW
Sbjct: 1032 RFHHFKGGICSCKDYW 1047
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 162/339 (47%), Gaps = 38/339 (11%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
N + +I+ Y ++G + +A +VF ++ +D+V W AM+ GL ++G A+ LF +M
Sbjct: 203 NSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQM 262
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
V P VLSAC+++ ++G +H + K L V AL+ +YSR G+
Sbjct: 263 HTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNF 322
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A QVF M +RD +YNSLI+GL+ G S +A+E+F++M ++P VT +L+AC
Sbjct: 323 IPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSAC 382
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDF------------ 275
S G + +G + F S G+ I G ++DL + + A++F
Sbjct: 383 SSVGALLVGKQ-FHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLW 441
Query: 276 -------------------ITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
T M+ I P+ S+L C + LGEQI ++L
Sbjct: 442 NVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLK 501
Query: 314 CRSADSGTYV--LLSNAYASSGKWKEAVQIRAKMKEAGV 350
YV +L + YA GK A++I ++KE V
Sbjct: 502 -TGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDV 539
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 154/313 (49%), Gaps = 40/313 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G++ H +K G+ S+ L++LY KC + K A + F E +VV VM+ V
Sbjct: 391 GKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLS-TETENVVLWNVML---V 446
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+GL++N E F +F +MQ + + PN+ T
Sbjct: 447 AYGLLDNLNESFK----------------------------IFTQMQMEGIEPNQFTYPS 478
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L CS L A++LG IH+ + K N V LI+MY++ G +D AL++F +KE+D
Sbjct: 479 ILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKD 538
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF- 240
V ++ ++IAG A H + EA+ +F+EM +QGI + F ++AC+ ++ G +I
Sbjct: 539 VVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHA 598
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG- 299
Q+ Y + + + +V L +R G+ +AY F + + D+I SL+S G
Sbjct: 599 QACVSGYSDDLSVGN--ALVSLYARCGKVRDAY-FAFDKIFSKDNISWNSLISGFAQSGH 655
Query: 300 ---KLQLGEQIAK 309
L L Q++K
Sbjct: 656 CEEALSLFSQMSK 668
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 164/372 (44%), Gaps = 68/372 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++HG VLK G LV LY + G F A Q+F+ M +
Sbjct: 290 GEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQ--------------- 334
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+D V + ++I GL + G +AL+LF++M D ++P+ VT+
Sbjct: 335 -----------------RDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVAS 377
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+LSACS +GAL +G+ HSY K + + I+ GAL+++Y +C DI A + F + +
Sbjct: 378 LLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETEN 437
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +N ++ + E+ ++F +M +GI P + T+ +L CS VDLG +I
Sbjct: 438 VVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHT 497
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK--------------------- 280
+ + G + + ++D+ +++G+ + A +K
Sbjct: 498 QVLKT-GFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFA 556
Query: 281 -------------IAPDHIMLGSLLSACKIHGKLQLGEQI-AKRLLDCRSADSGTYVLLS 326
I D+I S +SAC L G+QI A+ + S D L
Sbjct: 557 EALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALV 616
Query: 327 NAYASSGKWKEA 338
+ YA GK ++A
Sbjct: 617 SLYARCGKVRDA 628
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 170/378 (44%), Gaps = 29/378 (7%)
Query: 13 GLRSNRSTRLKLVELYGKCGEFKDAMQLFDE---MPECNDVVASTVMINCYVEHGLVENA 69
G+R+N T L L++ G F D +L + M C +VV +++ Y+ G ++ A
Sbjct: 63 GVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGA 122
Query: 70 FEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQL 129
VF + V+ CW ++ V R L LFR M ++ V+P+E T VL C
Sbjct: 123 VTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGG 182
Query: 130 G-ALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
IH+ H + + V LI++Y + G ++ A +VF+ +++RD ++ ++
Sbjct: 183 DVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAM 242
Query: 189 IAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYG 248
++GL+ G EAV +F +M G+ PT F VL+AC+ +G E + G
Sbjct: 243 LSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVG-EQLHGLVLKQG 301
Query: 249 IEPQIEHYGC--IVDLLSRVGR--PEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLG 304
+E Y C +V L SR+G P E + N + D + SL+S G
Sbjct: 302 FS--LETYVCNALVTLYSRLGNFIPAEQ---VFNAMLQRDEVSYNSLISGLSQQGYSDKA 356
Query: 305 EQIAKRL-LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE---------- 353
++ K++ LDC D T L +A +S G Q + +AG+ +
Sbjct: 357 LELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDL 416
Query: 354 -PGCSSIEVNNEIHEFIL 370
CS I+ HEF L
Sbjct: 417 YVKCSDIKT---AHEFFL 431
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 126/307 (41%), Gaps = 49/307 (15%)
Query: 98 ARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGAL 157
A ++ M+ VR N T + +L C G G +H + K ++ L
Sbjct: 50 ANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERL 109
Query: 158 INMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTK 217
+++Y GD+D A+ VF+EM R ++ +N ++ + + +FR M+ + ++P +
Sbjct: 110 MDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDE 169
Query: 218 VTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFIT 277
T+ GVL C G + E + T +G E + ++DL +
Sbjct: 170 RTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDL------------YFK 217
Query: 278 NMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKE 337
N G L SA K+ LQ KR DS ++V + + + SG +E
Sbjct: 218 N----------GFLNSAKKVFDGLQ------KR-------DSVSWVAMLSGLSQSGCEEE 254
Query: 338 AVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHP-QREQIYKKMQELKQIVKLEG 396
AV + +M +GV P +I + + + YK ++L +V +G
Sbjct: 255 AVLLFCQMHTSGVYPTP-------------YIFSSVLSACTKVEFYKVGEQLHGLVLKQG 301
Query: 397 YSPSTEV 403
+S T V
Sbjct: 302 FSLETYV 308
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/488 (39%), Positives = 289/488 (59%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G +IH V KLG + L+ Y C + +D++++F
Sbjct: 205 QGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVF------------------- 245
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG + + V WTA++ G N + AL +F EM R+ V PN+ +
Sbjct: 246 --HGKLH-----------MNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFT 292
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
L++C L AL+ GR IH+ K ++ + VG +LI MY RCG+++ + +F+ + ++
Sbjct: 293 SALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKK 352
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
++ ++NS+I G A HG + A+ F +M+ + P ++TF G+L+ACSH G+ G +F
Sbjct: 353 NIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLF 412
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ + + E +++HY C+VD+L R G+ EEA + I NM + + ++ LLSAC +H K
Sbjct: 413 KYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSK 472
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
L++ E+ AK ++D S YVLLSN YAS+ +W + +IR +MK+ G+ K+PG S I
Sbjct: 473 LEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWIT 532
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+ +EF+ GD HP ++IY+K++ L +K GY P LHD+ED +KE L+ H
Sbjct: 533 IKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYH 592
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLAI +GLIST +TI V+KNLRVC DCHS IKLIA I +RKIIVRD RFHHF +G
Sbjct: 593 SERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDG 652
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 653 RCSCGDYW 660
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 108/207 (52%), Gaps = 13/207 (6%)
Query: 36 DAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNG 95
+A +FD++ DV T+MI Y + ++A ++F + VKD V W +MI G
Sbjct: 13 EARTVFDKV-SFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDCA 71
Query: 96 EMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRI-DLNHIVG 154
++ A LF EM +V V+ +++ Q G +E+ + M I N ++
Sbjct: 72 DLTMARKLFDEMPERSV----VSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMIY 127
Query: 155 GALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-- 212
G N G ++ L++F+EM R+V ++ S+I GL HGRS EA+ +FR+M+ G
Sbjct: 128 GYCCN-----GRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVE 182
Query: 213 IRPTKVTFVGVLNACSHGGLVDLGFEI 239
++PT T+ V+ AC++ + G +I
Sbjct: 183 VKPTSSTYCCVITACANASALYQGVQI 209
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 157 LINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPT 216
+I + R ID+A VF+++ DV Y +I G A + R A+++F EM P
Sbjct: 1 MITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEM------PV 54
Query: 217 K--VTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYD 274
K V++ ++ C + + ++F M E + + +++ + G+ E A
Sbjct: 55 KDVVSWNSMIKGCFDCADLTMARKLFDEMP-----ERSVVSWTTMINGFLQFGKIEVAEG 109
Query: 275 FITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGK 334
M D S++ +G+++ G ++ + + CR+ S T ++ G+
Sbjct: 110 LFYKMPFR-DIAAWNSMIYGYCCNGRVEDGLRLFQE-MPCRNVISWTSMI--GGLDQHGR 165
Query: 335 WKEAVQIRAKMKEAGVQKEPGCSS 358
+EA+ + +M GV+ +P S+
Sbjct: 166 SEEALGLFRQMMGCGVEVKPTSST 189
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/488 (39%), Positives = 289/488 (59%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G +IH V KLG + L+ Y C + +D++++F
Sbjct: 221 QGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVF------------------- 261
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG + + V WTA++ G N + AL +F EM R+ V PN+ +
Sbjct: 262 --HGKLH-----------MNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFT 308
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
L++C L AL+ GR IH+ K ++ + VG +LI MY RCG+++ + +F+ + ++
Sbjct: 309 SALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKK 368
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
++ ++NS+I G A HG + A+ F +M+ + P ++TF G+L+ACSH G+ G +F
Sbjct: 369 NIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLF 428
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ + + E +++HY C+VD+L R G+ EEA + I NM + + ++ LLSAC +H K
Sbjct: 429 KYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSK 488
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
L++ E+ AK ++D S YVLLSN YAS+ +W + +IR +MK+ G+ K+PG S I
Sbjct: 489 LEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWIT 548
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+ +EF+ GD HP ++IY+K++ L +K GY P LHD+ED +KE L+ H
Sbjct: 549 IKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYH 608
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLAI +GLIST +TI V+KNLRVC DCHS IKLIA I +RKIIVRD RFHHF +G
Sbjct: 609 SERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDG 668
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 669 RCSCGDYW 676
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 108/207 (52%), Gaps = 13/207 (6%)
Query: 36 DAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNG 95
+A +FD++ DV T+MI Y + ++A ++F + VKD V W +MI G
Sbjct: 29 EARTVFDKV-SFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDCA 87
Query: 96 EMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRI-DLNHIVG 154
++ A LF EM +V V+ +++ Q G +E+ + M I N ++
Sbjct: 88 DLTMARKLFDEMPERSV----VSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMIY 143
Query: 155 GALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-- 212
G N G ++ L++F+EM R+V ++ S+I GL HGRS EA+ +FR+M+ G
Sbjct: 144 GYCCN-----GRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVE 198
Query: 213 IRPTKVTFVGVLNACSHGGLVDLGFEI 239
++PT T+ V+ AC++ + G +I
Sbjct: 199 VKPTSSTYCCVITACANASALYQGVQI 225
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 93/205 (45%), Gaps = 17/205 (8%)
Query: 156 ALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRP 215
++I + R ID+A VF+++ DV Y +I G A + R A+++F EM P
Sbjct: 16 SMITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEM------P 69
Query: 216 TK--VTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAY 273
K V++ ++ C + + ++F M E + + +++ + G+ E A
Sbjct: 70 VKDVVSWNSMIKGCFDCADLTMARKLFDEMP-----ERSVVSWTTMINGFLQFGKIEVAE 124
Query: 274 DFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSG 333
M D S++ +G+++ G ++ + + CR+ S T ++ G
Sbjct: 125 GLFYKMPFR-DIAAWNSMIYGYCCNGRVEDGLRLFQE-MPCRNVISWTSMI--GGLDQHG 180
Query: 334 KWKEAVQIRAKMKEAGVQKEPGCSS 358
+ +EA+ + +M GV+ +P S+
Sbjct: 181 RSEEALGLFRQMMGCGVEVKPTSST 205
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/446 (41%), Positives = 280/446 (62%), Gaps = 3/446 (0%)
Query: 46 ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
+ +D++A +++ Y + +E A +F + V+D+V W +I G ++NG A++ +
Sbjct: 302 DVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYG 361
Query: 106 EMQR-DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC 164
MQ+ + ++ + T V VL A S LGAL+ G +H+ K ++++ VG LI++Y++C
Sbjct: 362 HMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKC 421
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL 224
G + +A+ +FE+M R +N++I+GL +HG EA+ +F M +GI+P VTFV +L
Sbjct: 422 GKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLL 481
Query: 225 NACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPD 284
ACSH GLVD G F M Y I P +HY C+ D+L R G+ +EA++FI NM I PD
Sbjct: 482 AACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPD 541
Query: 285 HIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAK 344
+ G+LL AC+IHG +++G+ ++ L + + G YVL+SN YA GKW ++R+
Sbjct: 542 SAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSL 601
Query: 345 MKEAGVQKEPGCSSIEVNNEIHEFILGDIR--HPQREQIYKKMQELKQIVKLEGYSPSTE 402
++ +QK PG SSIEV ++ F G+ HPQ E+I +++ L ++ GY
Sbjct: 602 VRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQAELRSLLAKIRSVGYVSDYS 661
Query: 403 VVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANIT 462
VL D+ED EKE L HSERLAI +G+I+T T + + KNLRVC DCH+ K I+ IT
Sbjct: 662 FVLQDVEDDEKEHILNNHSERLAIAFGIINTPSRTPLHIYKNLRVCGDCHNATKYISQIT 721
Query: 463 KRKIIVRDRNRFHHFENGTCSCGDYW 488
+R+IIVRD NRFHHF++G CSCGD+W
Sbjct: 722 EREIIVRDSNRFHHFKDGHCSCGDFW 747
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 149/305 (48%), Gaps = 21/305 (6%)
Query: 50 VVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
V S +++ Y+ G + A++VF + +D W AM+ GL RN A A+ LF M
Sbjct: 103 VFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVG 162
Query: 110 DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDK 169
+ V + VT+ VL C LG L +H Y KH +D V ALI++Y + G +++
Sbjct: 163 EGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEE 222
Query: 170 ALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH 229
A VF M+ RD+ T+NS+I+G G++ A++MF+ M G+ P +T V + +A +
Sbjct: 223 AQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQ 282
Query: 230 GGLVDLGFEIF-QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
GG + M R + ++ I IVD+ +++ E A +M + D +
Sbjct: 283 GGDGRSAKSLHCYVMRRGWDVDDIIAG-NAIVDMYAKLSNIEAAQRMFDSMPVQ-DSVSW 340
Query: 289 GSLLS----------ACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEA 338
+L++ A + +G +Q E + A GT+V + AY+ G ++
Sbjct: 341 NTLITGYMQNGLANEAVERYGHMQKHEGL--------KAIQGTFVSVLPAYSHLGALQQG 392
Query: 339 VQIRA 343
+++ A
Sbjct: 393 MRMHA 397
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 143/290 (49%), Gaps = 37/290 (12%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
+I+ Y + G++E A VF ++ +D V W ++I G + G+ A AL +F+ M+ V
Sbjct: 208 NALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVS 267
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGG-ALINMYSRCGDIDKALQ 172
P+ +T+V + SA +Q G + +H Y+ + D++ I+ G A+++MY++ +I+ A +
Sbjct: 268 PDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQR 327
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM-INQGIRPTKVTFVGVLNACSHGG 231
+F+ M +D ++N+LI G +G + EAVE + M ++G++ + TFV VL A SH G
Sbjct: 328 MFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLG 387
Query: 232 LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK----------- 280
+ G + +++ G+ + C++DL ++ G+ EA M
Sbjct: 388 ALQQGMRM-HALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAII 446
Query: 281 -----------------------IAPDHIMLGSLLSACKIHGKLQLGEQI 307
I PDH+ SLL+AC G + G
Sbjct: 447 SGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSF 496
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 36/199 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G +H +K+GL + L++LY KCG+ +AM LF++MP
Sbjct: 391 QGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPR-------------- 436
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ T W A+I GL +G A AL LF MQ++ ++P+ VT V
Sbjct: 437 ------------------RSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFV 478
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG--GALINMYSRCGDIDKALQVFEEMK 178
+L+ACS G ++ GR M + D+ I + +M R G +D+A + M
Sbjct: 479 SLLAACSHAGLVDQGRSFFDVM-QVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMP 537
Query: 179 -ERDVTTYNSLIAGLAMHG 196
+ D + +L+ +HG
Sbjct: 538 IKPDSAVWGALLGACRIHG 556
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/488 (37%), Positives = 282/488 (57%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR IH V+K G + L+++Y KCGE D ++
Sbjct: 440 QGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLK--------------------- 478
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
VFS + D + W +I V + + EM+ + + P+E T++
Sbjct: 479 -----------VFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVL 527
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L CS L G+ IH Y+ K + N +G ALI MYS+CG ++ ++VF+ MKE+
Sbjct: 528 GILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEK 587
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV T+ +LI+ M+G +A++ F++M G+ P V F+ + ACSH G+V G F
Sbjct: 588 DVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFF 647
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
M DY +EP++EHY C+VDLL+R G +A +FI +M + PD + G+LLSAC+ G
Sbjct: 648 DRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGN 707
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+ ++++K++L+ S D+G YVL+SN YA+ GKW + +R MK G++KEPG S IE
Sbjct: 708 TNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIE 767
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+ ++ F GD Q +++ ++ L +++ EGY + LHD+E+ +K L H
Sbjct: 768 IQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQFALHDVEEDDKRDMLCGH 827
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLAI +GL++TKP + + V+KNLRVC DCH++ K I I +R+I+VRD NRFH F++G
Sbjct: 828 SERLAIAFGLLNTKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHRFKDG 887
Query: 481 TCSCGDYW 488
CSCGD+W
Sbjct: 888 ACSCGDHW 895
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 155/305 (50%), Gaps = 11/305 (3%)
Query: 46 ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
EC D VA ++I+ Y + G + A EVF K KD+V W ++I+G ++G L+ F+
Sbjct: 354 EC-DTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFK 412
Query: 106 EMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG 165
M+ + +P+ VT V +LS SQL + GR IH + K + I+G +L+++Y++CG
Sbjct: 413 MMKMER-KPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCG 471
Query: 166 DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
++D L+VF M D+ ++N++IA +M EM +G+ P + T +G+L
Sbjct: 472 EMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILP 531
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDH 285
CS + G EI + + G E + ++++ S+ G E MK D
Sbjct: 532 MCSLLAVRRQGKEIHGYIFKS-GFESNVPIGNALIEMYSKCGSLENCIKVFKYMK-EKDV 589
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRLLDCRSA----DSGTYVLLSNAYASSGKWKEAVQI 341
+ +L+SA ++G+ G++ K D + DS ++ A + SG KE ++
Sbjct: 590 VTWTALISAFGMYGE---GKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRF 646
Query: 342 RAKMK 346
+MK
Sbjct: 647 FDRMK 651
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 179/390 (45%), Gaps = 26/390 (6%)
Query: 43 EMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALD 102
EM +D+ +I+ Y ++NA VF + +D+V W ++I G NG ALD
Sbjct: 149 EMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALD 208
Query: 103 LFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYS 162
++ + + + P+ T+ VL AC L A++ G +H + K I + I+G L++MY
Sbjct: 209 MYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYF 268
Query: 163 RCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVG 222
+ + +A +VF +M +D T+N++I G A GR +V++F +MI+ G P ++
Sbjct: 269 KFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITS 327
Query: 223 VLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIA 282
+ AC G + +G + + + G E ++D+ ++ G A + K
Sbjct: 328 TIRACGQSGDLQVGKFVHKYLIGS-GFECDTVACNILIDMYAKCGDLLAAQEVFDTTK-C 385
Query: 283 PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIR 342
D + SL++ G + G + K + R DS T+VLL + I
Sbjct: 386 KDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKPDSVTFVLL-------------LSIF 432
Query: 343 AKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTE 402
+++ + + C I+ E E I+G+ +Y K E+ ++K+ Y +
Sbjct: 433 SQLADINQGRGIHCDVIKFGFE-AELIIGN----SLLDVYAKCGEMDDLLKVFSYMSA-- 485
Query: 403 VVLHDIEDWEKEWALAIHSERLAICYGLIS 432
HDI W A ++H + + + +I+
Sbjct: 486 ---HDIISWNTVIASSVHFDDCTVGFQMIN 512
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 132/279 (47%), Gaps = 35/279 (12%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG +HG + K+G+ DV+ +++ Y
Sbjct: 240 EGVAVHGVIEKIGI--------------------------------AGDVIIGNGLLSMY 267
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ + A VFS++ VKD+V W MI G + G ++ LF +M D P+ ++I
Sbjct: 268 FKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DGFVPDMLSIT 326
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+ AC Q G L++G+++H Y+ + + + LI+MY++CGD+ A +VF+ K +
Sbjct: 327 STIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCK 386
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D T+NSLI G G E +E F+ M+ +P VTFV +L+ S ++ G I
Sbjct: 387 DSVTWNSLINGYTQSGYYKEGLESFK-MMKMERKPDSVTFVLLLSIFSQLADINQGRGIH 445
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM 279
+ + +G E ++ ++D+ ++ G ++ + M
Sbjct: 446 CDVIK-FGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYM 483
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 98/227 (43%), Gaps = 41/227 (18%)
Query: 136 RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE-RDVTTYNSLIAGLAM 194
R +HS + + L+ I G LI+ Y++ D ++ VF + +V +NS+I L
Sbjct: 39 RTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTH 98
Query: 195 HGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIE 254
+G +A+ + EM + ++P TF V+N+C+ ++LG I + G E +
Sbjct: 99 NGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGC-IVHEHAMEMGFESDLY 157
Query: 255 HYGCIVDLLSRVGRPEEA-YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
++D+ SR + A Y F E+++ R
Sbjct: 158 IGNALIDMYSRFVDLDNARYVF-----------------------------EEMSNR--- 185
Query: 314 CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
DS ++ L + Y S+G W++A+ + K + G+ P C ++
Sbjct: 186 ----DSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMV--PDCFTMS 226
>gi|220061997|gb|ACL79586.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
Length = 587
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/493 (39%), Positives = 284/493 (57%), Gaps = 45/493 (9%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
++H VL+LG+ ++ L++ Y KCG+ A ++FDEM
Sbjct: 132 QLHALVLRLGVAADVRLLTTLLDSYAKCGDLASARKVFDEM------------------- 172
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR------DNVRPNEV 117
V+D W +++ GL + E AL LF + PNEV
Sbjct: 173 -------------TVRDVATWNSLLAGLAQGTEPNLALALFHRLANSFQELPSREEPNEV 219
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
TIV LSAC+Q+G L+ G ++H + + +D N V +LI+MYS+CG + +AL VF +
Sbjct: 220 TIVAALSACAQIGLLKDGMYVHEFAKRFGLDRNVRVCNSLIDMYSKCGSLSRALDVFHSI 279
Query: 178 KERDVT--TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
K D T +YN+ I +MHG +A+ +F EM + I P VT++ VL C+H GLVD
Sbjct: 280 KPEDQTLVSYNAAIQAHSMHGHGGDALRLFDEMPTR-IEPDGVTYLAVLCGCNHSGLVDD 338
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G +F SM + P ++HYG IVDLL R GR EAYD + +M D ++ +LL A
Sbjct: 339 GLRVFNSMR----VAPNMKHYGTIVDLLGRAGRLTEAYDTVISMPFPADIVLWQTLLGAA 394
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
K+HG ++L E A +L + S G YVLLSN YAS +W + ++R M+ V+K PG
Sbjct: 395 KMHGVVELAELAANKLAELGSNVDGDYVLLSNVYASKARWMDVGRVRDTMRSNDVRKVPG 454
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
S E++ +H+FI GD HP+ ++IY+ ++++ + GY P T VLHDI + EK++
Sbjct: 455 FSYTEIDGVMHKFINGDKEHPRWQEIYRALEDIVSRISELGYEPETSNVLHDIGEEEKQY 514
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
AL HSE+LAI +GLI+T P T+RV+KNLR+C DCH + KLI+ R I++RDR RFH
Sbjct: 515 ALCYHSEKLAIAFGLIATPPGETLRVIKNLRICGDCHVVAKLISKAYGRVIVIRDRARFH 574
Query: 476 HFENGTCSCGDYW 488
FE+G CSC DYW
Sbjct: 575 RFEDGQCSCRDYW 587
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 78/198 (39%), Gaps = 37/198 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEM-PECNDVVASTVMINC 59
+G +H + GL N L+++Y KCG A+ +F + PE +V+ I
Sbjct: 236 DGMYVHEFAKRFGLDRNVRVCNSLIDMYSKCGSLSRALDVFHSIKPEDQTLVSYNAAIQA 295
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
+ HG G+ AL LF EM + P+ VT
Sbjct: 296 HSMHG----------------------------HGGD---ALRLFDEMP-TRIEPDGVTY 323
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
+ VL C+ G ++ G + + M R+ N G ++++ R G + +A M
Sbjct: 324 LAVLCGCNHSGLVDDGLRVFNSM---RVAPNMKHYGTIVDLLGRAGRLTEAYDTVISMPF 380
Query: 179 ERDVTTYNSLIAGLAMHG 196
D+ + +L+ MHG
Sbjct: 381 PADIVLWQTLLGAAKMHG 398
>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/441 (39%), Positives = 276/441 (62%), Gaps = 1/441 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+DV + +++ Y G ++ A VF +++ K+ V W A+I G R G+ L +F EM
Sbjct: 74 DDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEM 133
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
QR+ T V SA + +GALE G+W+H++M K L+ VG +++MY++ G +
Sbjct: 134 QRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSM 193
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A +VF+ + ++D+ T+NS++ A +G EAV F EM G+ ++TF+ +L AC
Sbjct: 194 IDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTAC 253
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SHGGLV G + F M +++ +EP+I+HY +VDLL R G +A FI M + P +
Sbjct: 254 SHGGLVKEGKQYFD-MMKEHNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAV 312
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
G+LL +C++H ++G+ A + + D+G VLL N YAS+G+W A ++R MK
Sbjct: 313 WGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKA 372
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
GV+KEP CS +E+ N +H F+ D HP+ E+IYKK +E+ ++ GY P+T+ VL
Sbjct: 373 TGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLH 432
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
+++ E++ L HSE++A+ + LI+ TIR++KN+R+C DCHS + I+ + +R+I+
Sbjct: 433 VDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFEREIV 492
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
VRD NRFHHF +G+CSCGDYW
Sbjct: 493 VRDTNRFHHFSSGSCSCGDYW 513
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 129/282 (45%), Gaps = 9/282 (3%)
Query: 76 VKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELG 135
+ +D WT++I G +N AL L M R +PN T +L A + +G
Sbjct: 1 MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60
Query: 136 RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMH 195
IH+ K+ + VG AL++MY+RCG +D A+ VF++++ ++ ++N+LIAG A
Sbjct: 61 EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 120
Query: 196 GRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEH 255
G + MF EM G T T+ V +A + G ++ G + M + G
Sbjct: 121 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKS-GERLSAFV 179
Query: 256 YGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR 315
I+D+ ++ G +A ++ D + S+L+A +G LG + + R
Sbjct: 180 GNTILDMYAKSGSMIDARKVFDHVD-KKDLVTWNSMLTAFAQYG---LGREAVTHFEEMR 235
Query: 316 SA----DSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
+ T++ + A + G KE Q MKE ++ E
Sbjct: 236 KCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPE 277
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 89/198 (44%), Gaps = 37/198 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ +H ++K G R + ++++Y K G DA ++FD + + D+V M+ +
Sbjct: 160 QGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDHVDK-KDLVTWNSMLTAF 218
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++GL A+ F EM++ V N++T +
Sbjct: 219 AQYGLGR-------------------------------EAVTHFEEMRKCGVHLNQITFL 247
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRI--DLNHIVGGALINMYSRCGDIDKALQ-VFEEM 177
+L+ACS G ++ G+ M +H + +++H V ++++ R G ++ AL +F+
Sbjct: 248 SILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYV--TVVDLLGRAGLLNDALVFIFKMP 305
Query: 178 KERDVTTYNSLIAGLAMH 195
+ + +L+ MH
Sbjct: 306 MKPTAAVWGALLGSCRMH 323
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/487 (38%), Positives = 282/487 (57%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ IHG +K+G L+ +YGK G+ A +LF+ +P+ N
Sbjct: 156 GKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPN------------- 202
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
TV W ++I V NG +D F +M+R + +E TI+
Sbjct: 203 -------------------TVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILA 243
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L AC LG +L IH M + AL++ Y++ G + + VF E+ D
Sbjct: 244 LLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFAD 303
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ +++AG A HG EA+++F M N+G+ P VTF +L+ACSH GLV+ G F
Sbjct: 304 RVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFN 363
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M+ YGIEP+++HY C+VDLL R G +AY+ I NM + P+ + G+LL AC++HG +
Sbjct: 364 VMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNI 423
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LG+++A+ L++ D Y++LSN Y++S WK+A ++RA +KE G+++ PG SSIE
Sbjct: 424 ELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGYSSIEY 483
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N+ H F +GD HP+ E+IY K++EL ++ GYS TE VL D+E+ KE + HS
Sbjct: 484 GNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDVEEEVKEDMINKHS 543
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GL+ +K + + KNLR+C DCHS KLI+ I KR II+RD RFHHF +G
Sbjct: 544 EKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIIIRDPKRFHHFSDGF 603
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 604 CSCADYW 610
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 193/413 (46%), Gaps = 40/413 (9%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRP 114
++ CY + G E+A ++F + KD V W ++I G R M+ L F M+ + +V+P
Sbjct: 80 LVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRCLHMS--LTAFYTMKFEMSVKP 137
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
NEVTI+ ++SAC+ GAL+ G++IH + K L V +LINMY + GD+ A ++F
Sbjct: 138 NEVTILSMISACN--GALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLF 195
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
E + + + ++NS+IA +G + E ++ F +M GI + T + +L AC H G+
Sbjct: 196 EAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGK 255
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
L E + G +I ++D +++GR +Y T + A D + ++L+
Sbjct: 256 LA-ESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFA-DRVAWTAMLAG 313
Query: 295 CKIHG----KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA-G 349
HG ++L E +A + L+ D T+ L +A + SG E M E G
Sbjct: 314 YAAHGLGREAIKLFESMANKGLE---PDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYG 370
Query: 350 VQKEPGCSSIEVN--------NEIHEFI---------------LGDIRHPQREQIYKKMQ 386
++ S V+ N+ +E I LG R ++ K++
Sbjct: 371 IEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVA 430
Query: 387 ELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTI 439
E ++ +E P ++L ++ + W A L GL T Y++I
Sbjct: 431 E--HLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGYSSI 481
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 122/303 (40%), Gaps = 68/303 (22%)
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
E + +L A + ++ R IH+ + K + + +G L+ Y++ G + AL++F+
Sbjct: 39 EAIVSALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFD 98
Query: 176 EMKERDVTTYNSLIAGLA--MHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS----- 228
+M +D+ ++NSLI+G + +H M EM ++P +VT + +++AC+
Sbjct: 99 DMPHKDLVSWNSLISGFSRCLHMSLTAFYTMKFEM---SVKPNEVTILSMISACNGALDA 155
Query: 229 ----HGGLVDLG----FEIFQSMTRDYG---------------IEPQIEHYGCIVDLLSR 265
HG + +G ++ S+ YG +P + I+
Sbjct: 156 GKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVT 215
Query: 266 VGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQ---------------I 307
G E D+ M+ I D + +LL AC G +L E I
Sbjct: 216 NGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITI 275
Query: 308 AKRLLDCRS-----------------ADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
A LLD + AD + + YA+ G +EA+++ M G+
Sbjct: 276 ATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGL 335
Query: 351 QKE 353
+ +
Sbjct: 336 EPD 338
>gi|449494077|ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g34160-like [Cucumis sativus]
Length = 576
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/442 (41%), Positives = 286/442 (64%), Gaps = 4/442 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV+ T +++ Y + G ++ A ++F + D W A+I G + A A+ F+ M+
Sbjct: 137 DVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFAQGSRPADAIMTFKRMK 196
Query: 109 RD-NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
D N+RPN VT+ L ACSQLGAL+ G +H Y+ + ++D N V +I+MY++CG +
Sbjct: 197 VDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLDSNVQVCNVVIDMYAKCGSM 256
Query: 168 DKALQVFEEMK-ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
DKA VFE M+ ++ + T+N++I AMHG +A+++F ++ G+ P V+++ VL A
Sbjct: 257 DKAYWVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAVSYLAVLCA 316
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
C+H GLV+ G ++F SMT+ G+EP I+HYG +VDLL R GR +EAYD ++++ P+ +
Sbjct: 317 CNHAGLVEDGLKLFNSMTQR-GLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLPF-PNMV 374
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
+ +LL AC+ +G +++ E +++L++ G +VLLSN YA+ +W + ++R M+
Sbjct: 375 LWQTLLGACRTYGDVEMAELASRKLVEMGFISCGXFVLLSNVYAARQRWDDVGRVRDAMR 434
Query: 347 EAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH 406
V+K PG S IE+ ++++F+ GD H +IY K+ E+ +K GYS T VLH
Sbjct: 435 RRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLRIKAYGYSADTSNVLH 494
Query: 407 DIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKI 466
DI D +KE AL HSE+LA+ +GL T+ T I+V+KNLR+C DCH +IKLI+ I R+I
Sbjct: 495 DIGDEDKENALCYHSEKLAVAFGLTCTEEGTPIQVIKNLRICGDCHVVIKLISKIYIREI 554
Query: 467 IVRDRNRFHHFENGTCSCGDYW 488
IVRDR RFH F+ G CSC DYW
Sbjct: 555 IVRDRTRFHRFKEGLCSCKDYW 576
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 148/295 (50%), Gaps = 11/295 (3%)
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV--RPNEVTIVC 121
G + A +F + T W A+I G + + A A+ +R M N R + +T
Sbjct: 49 GDLSYALHIFRYIPYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALTCSF 108
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
L AC++ A +HS + + + + ++ L++ Y++ GD+D A ++F+EM + D
Sbjct: 109 ALKACARALARSEAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPD 168
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREM-INQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+ ++N+LIAG A R +A+ F+ M ++ +RP VT G L ACS G + G +
Sbjct: 169 IASWNALIAGFAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVH 228
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG- 299
+ + + ++ ++ ++D+ ++ G ++AY NM+ I +++ A +HG
Sbjct: 229 KYIVEE-KLDSNVQVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGD 287
Query: 300 ---KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
L L E++ + + S D+ +Y+ + A +G ++ +++ M + G++
Sbjct: 288 GHKALDLFEKLGRSGM---SPDAVSYLAVLCACNHAGLVEDGLKLFNSMTQRGLE 339
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 93/214 (43%), Gaps = 33/214 (15%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG +H +++ L SN ++++Y KCG A +F+ M ++ MI +
Sbjct: 223 EGESVHKYIVEEKLDSNVQVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAF 282
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG DG +ALDLF ++ R + P+ V+ +
Sbjct: 283 AMHG------------------------DG-------HKALDLFEKLGRSGMSPDAVSYL 311
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL AC+ G +E G + + M + ++ N G+++++ R G + +A + +
Sbjct: 312 AVLCACNHAGLVEDGLKLFNSMTQRGLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLPFP 371
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMF-REMINQGI 213
++ + +L+ +G +E E+ R+++ G
Sbjct: 372 NMVLWQTLLGACRTYG-DVEMAELASRKLVEMGF 404
>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 682
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/487 (41%), Positives = 282/487 (57%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++H Q LK L N LV++YGKC DA + F+ +PE
Sbjct: 228 GAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPE--------------- 272
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K+ V WTA++ +N AL LF +M+ + V+PNE T
Sbjct: 273 -----------------KNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAV 315
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
L++C+ L AL G + + + K + +V AL+NMYS+ G I+ A +VF M RD
Sbjct: 316 ALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRD 375
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++N +I G A HG + E +E F M++ + P+ VTFVGVL+AC+ GLVD F
Sbjct: 376 VVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLN 435
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+M ++ GI P EHY C+V LL RVGR +EA FI N I D + SLL++C+++
Sbjct: 436 TMMKEVGITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLLNSCQVYKNY 495
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
LG ++A+++L +D GTYVLLSN YA + +W V++R M+E V+K PG S I V
Sbjct: 496 GLGHRVAEQILQLEPSDVGTYVLLSNMYAKANRWDGVVKVRKHMRERAVRKSPGVSWIHV 555
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+++H F + HPQ +QI KK++EL +K GY P+ VVLHDI+D KE L HS
Sbjct: 556 GSDVHVFTSEEKVHPQMDQIAKKLEELIDQIKAIGYVPNFAVVLHDIDDERKEEHLMYHS 615
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ +GLI T TI ++KNLR+C+DCH IKLI+ +T RKI+VRD RFH E G
Sbjct: 616 EKLALAFGLIHTPKGATIHIMKNLRICDDCHVAIKLISVVTSRKIVVRDAVRFHCIEGGI 675
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 676 CSCNDYW 682
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 164/356 (46%), Gaps = 38/356 (10%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+ HG +K G R ++ +Y +C +DA ++F+ +
Sbjct: 127 GRQCHGYAVKAGFAEQRYVFNAVLYMYCQCAHMEDASKVFESV----------------- 169
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ F+ F+ + +MI+G + G++ +L + R M + + + V+ V
Sbjct: 170 ------SGFDAFA---------FNSMINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYVA 214
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL C+ + LG +H+ K R++LN VG AL++MY +C + A + FE + E++
Sbjct: 215 VLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKN 274
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ +++ + +A+++F +M +G++P + T+ LN+C+ + G +
Sbjct: 275 VVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGA 334
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+ + G + ++++ S+ G E+A+ +M + D + +++ HG
Sbjct: 335 CVMKT-GHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPL-RDVVSWNLIITGYAHHGLA 392
Query: 302 QLGEQIAKRLLDCRSADSG-TYVLLSNAYASSGKWKEAV-QIRAKMKEAGVQKEPG 355
+ G + +L S T+V + +A A G EA + MKE G+ PG
Sbjct: 393 REGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVGIT--PG 446
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 3/180 (1%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DVV +I+ Y + G V A VF + ++ V ++ G +G +L L R +
Sbjct: 44 DVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSGYASSGRHKESLQLLRVV- 102
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ NE + +SA + + + ++GR H Y K V A++ MY +C ++
Sbjct: 103 --DFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQRYVFNAVLYMYCQCAHME 160
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +VFE + D +NS+I G G+ ++ + R M + + V++V VL C+
Sbjct: 161 DASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYVAVLGHCA 220
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/491 (39%), Positives = 289/491 (58%), Gaps = 42/491 (8%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++HGQ +KLGL + + G +IN Y
Sbjct: 368 GKQLHGQTIKLGLST--------INCVGNS------------------------LINMYA 395
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALD----LFREMQRDNVRPNEV 117
G +E A + F+ + K+ + + D A+ALD E++ V +
Sbjct: 396 RSGTMECARKAFNILFEKNLISYNTAADA------NAKALDSDESFNHEVEHTGVGASPF 449
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T C+LS + +G + G IH+ + K N + ALI+MYS+CG+ + ALQVF +M
Sbjct: 450 TYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDM 509
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
R+V T+ S+I+G A HG + +A+E+F EM+ G++P +VT++ VL+ACSH GL+D +
Sbjct: 510 GYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAW 569
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
+ F SM ++ I P++EHY C+VDLL R G EA +FI +M D ++ + L +C++
Sbjct: 570 KHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRV 629
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
H +LGE AK++L+ D TY+LLSN YAS G+W + +R MK+ + KE G S
Sbjct: 630 HRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYS 689
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
IEV+N++H+F +GD HPQ +IY ++ EL +K GY P+T+ VLHD+ED +KE L
Sbjct: 690 WIEVDNQVHKFHVGDTSHPQARKIYDELDELALKIKNLGYIPNTDFVLHDVEDEQKEQYL 749
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE++A+ Y LIST IRV KNLRVC DCH+ IK I+ +T R+I+VRD NRFHH
Sbjct: 750 FQHSEKIAVAYALISTPKPKPIRVFKNLRVCGDCHTAIKYISIVTGREIVVRDANRFHHI 809
Query: 478 ENGTCSCGDYW 488
++G CSC DYW
Sbjct: 810 KDGKCSCNDYW 820
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 151/332 (45%), Gaps = 39/332 (11%)
Query: 50 VVASTVMINCYVEHGL-VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
V +I+ + + GL +++A VF +++ K+ V WT MI + G + A+DLF +
Sbjct: 181 VCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLL 240
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
P++ T+ +LSAC +L LG+ +HS++ + + + VG L++MY++ ++
Sbjct: 241 VSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVE 300
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+ ++F M +V ++ +LI+G + EA+++F M++ + P TF VL AC+
Sbjct: 301 NSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACA 360
Query: 229 -----------HGGLVDLGFE----IFQSMTRDYG---------------IEPQIEHYGC 258
HG + LG + S+ Y E + Y
Sbjct: 361 SLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNT 420
Query: 259 IVDLLSRVGRPEEAYDF-ITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSA 317
D ++ +E+++ + + + LLS G + GEQI ++ +
Sbjct: 421 AADANAKALDSDESFNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIV---KS 477
Query: 318 DSGTYVLLSNA----YASSGKWKEAVQIRAKM 345
GT + ++NA Y+ G + A+Q+ M
Sbjct: 478 GFGTNLCINNALISMYSKCGNKEAALQVFNDM 509
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 125/253 (49%), Gaps = 6/253 (2%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+DV +++ Y + VEN+ ++F+ + + + WTA+I G V++ + A+ LF M
Sbjct: 281 SDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNM 340
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+V PN T VL AC+ L +G+ +H K + + VG +LINMY+R G +
Sbjct: 341 LHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTM 400
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMF-REMINQGIRPTKVTFVGVLNA 226
+ A + F + E+++ +YN+ + +++++ E F E+ + G+ + T+ +L+
Sbjct: 401 ECARKAFNILFEKNLISYNT---AADANAKALDSDESFNHEVEHTGVGASPFTYACLLSG 457
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
+ G + G +I + + G + ++ + S+ G E A +M + I
Sbjct: 458 AACIGTIVKGEQIHALIVKS-GFGTNLCINNALISMYSKCGNKEAALQVFNDMGYR-NVI 515
Query: 287 MLGSLLSACKIHG 299
S++S HG
Sbjct: 516 TWTSIISGFAKHG 528
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 126/284 (44%), Gaps = 38/284 (13%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H +++ GL + L+ LY KCG++++A+ +F M
Sbjct: 58 GKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGH--------------- 102
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM---QRDNVRPNEVT 118
+D V W+A+I N +RAL F M R+ + PNE
Sbjct: 103 ---------------HKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYC 147
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHI-VGGALINMYSRCG-DIDKALQVFEE 176
+L +CS G I +++ K +H+ VG ALI+M+++ G DI A VF++
Sbjct: 148 FTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDK 207
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
M+ +++ T+ +I + G +AV++F ++ P K T +L+AC LG
Sbjct: 208 MQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLG 267
Query: 237 FEIFQSMTRDYGIEPQIEHYGC-IVDLLSRVGRPEEAYDFITNM 279
++ + R G+ + GC +VD+ ++ E + M
Sbjct: 268 KQLHSWVIRS-GLASDV-FVGCTLVDMYAKSAAVENSRKIFNTM 309
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 99/226 (43%), Gaps = 40/226 (17%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM--KE 179
+L AC + G LELG+ +H + + L+ ++ +LI +YS+CGD + AL +F M +
Sbjct: 45 LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHK 104
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG---IRPTKVTFVGVLNACSHGGLVDLG 236
RD+ +++++I+ A + A+ F M+ I P + F +L +CS+ G
Sbjct: 105 RDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTG 164
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLL--------------------------------S 264
IF + + + + ++D+ S
Sbjct: 165 LAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYS 224
Query: 265 RVGRPEEAYDFITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQI 307
++G ++A D + ++ PD L SLLSAC LG+Q+
Sbjct: 225 QLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQL 270
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 34/197 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G +IH ++K G +N L+ +Y KCG + A+Q+F++M N V+ T +I+ +
Sbjct: 466 KGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRN-VITWTSIISGF 524
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+HG +AL+LF EM V+PNEVT +
Sbjct: 525 AKHGFA-------------------------------TKALELFYEMLEIGVKPNEVTYI 553
Query: 121 CVLSACSQLGAL-ELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
VLSACS +G + E + +S H I ++++ R G + +A++ M
Sbjct: 554 AVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPF 613
Query: 179 ERDVTTYNSLIAGLAMH 195
+ D + + + +H
Sbjct: 614 DADALVWRTFLGSCRVH 630
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/442 (41%), Positives = 280/442 (63%), Gaps = 1/442 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D V +I+ Y E G+++ A +F ++ KD V WT+MI V NG +AL++F M
Sbjct: 394 SDPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSM 453
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ + P+ VT+V +LSA L L+ G+ IH ++ + L + L++MY+RCG +
Sbjct: 454 KETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSV 513
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+ A ++F K R++ + ++I+ MHG AVE+F M ++ I P +TF+ +L AC
Sbjct: 514 EDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYAC 573
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SH GLV+ G + M +Y +EP EHY C+VDLL R EEAY + +M+ P +
Sbjct: 574 SHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEV 633
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+LL AC+IH ++GE A++LL+ + G YVL+SN +A++G+WK+ ++R +MK
Sbjct: 634 WCALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKG 693
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLE-GYSPSTEVVLH 406
+G+ K PGCS IEV N+IH F+ D HP+ ++IY+K+ ++ + +K E GY T+ VLH
Sbjct: 694 SGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIYQKLAQVTEKLKREGGYVAQTKFVLH 753
Query: 407 DIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKI 466
++ + EK L HSERLAI YGL++T T IRV KNLRVC DCHS L++ +R++
Sbjct: 754 NVGEEEKVQMLYGHSERLAIAYGLLATAEGTPIRVTKNLRVCGDCHSFCTLVSRFFEREL 813
Query: 467 IVRDRNRFHHFENGTCSCGDYW 488
IVRD +RFHHF++G CSCGD+W
Sbjct: 814 IVRDASRFHHFKDGMCSCGDFW 835
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 161/343 (46%), Gaps = 45/343 (13%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMINCYV 61
+ ++LK G+ +N T ++ K MQ+ + + DV + ++ YV
Sbjct: 147 LFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYV 206
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G + A +F ++ KD V W +M+ G ++NG + AL+ F ++Q +++P++V+I+
Sbjct: 207 RFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIIS 266
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
++ A +LG L G+ IH+Y K+ D N +VG LI+MY++C + + F+ M +D
Sbjct: 267 IIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKD 326
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HG 230
+ ++ + AG A + ++A+E+ R++ +G+ +L AC HG
Sbjct: 327 LISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHG 386
Query: 231 -----------------------GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
G++D IF+S+ + + ++ G
Sbjct: 387 YTIRGGLSDPVLQNTIIDVYGECGIIDYAVRIFESIEC-----KDVVSWTSMISCYVHNG 441
Query: 268 RPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQI 307
+A + ++MK + PD++ L S+LSA L+ G++I
Sbjct: 442 LANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEI 484
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 152/356 (42%), Gaps = 39/356 (10%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G EIHG +K G S LV LY KC + A +LFD M NDVV+
Sbjct: 77 GAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVS--------- 127
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
W ++I NG AL LF EM + V N T
Sbjct: 128 ----------------------WNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAA 165
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
L AC ++LG IH+ + K L+ V AL+ MY R G + +A +F ++ +D
Sbjct: 166 ALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKD 225
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ T+NS++ G +G EA+E F ++ N ++P +V+ + ++ A G + G EI
Sbjct: 226 IVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHA 285
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSR---VGRPEEAYDFITNMK-IAPDHIMLGSLLSACKI 297
++ G + I ++D+ ++ + A+D + + I+ G + C +
Sbjct: 286 YAIKN-GFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYL 344
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKE--AVQIRAKMKEAGVQ 351
L+L Q+ +D + G+ +L GK KE IR + + +Q
Sbjct: 345 QA-LELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPVLQ 399
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 35/269 (13%)
Query: 27 LYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTA 86
+YGKCG DA +FD+M E + W A
Sbjct: 1 MYGKCGSVLDAEMIFDKMSE--------------------------------RSIFTWNA 28
Query: 87 MIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHR 146
M+ G V NGE AL+++REM+ V + T +L AC + L G IH K+
Sbjct: 29 MMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPVLLKACGIVEDLFCGAEIHGLAIKYG 88
Query: 147 IDLNHIVGGALINMYSRCGDIDKALQVFEEMKER-DVTTYNSLIAGLAMHGRSIEAVEMF 205
D V +L+ +Y++C DI+ A ++F+ M R DV ++NS+I+ + +G EA+ +F
Sbjct: 89 CDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLF 148
Query: 206 REMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSR 265
EM+ G+ TF L AC + LG +I ++ + G + +V + R
Sbjct: 149 SEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKS-GRVLDVYVANALVAMYVR 207
Query: 266 VGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
G+ EA N++ D + S+L+
Sbjct: 208 FGKMPEAAVIFGNLE-GKDIVTWNSMLTG 235
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 32/136 (23%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+EIHG +++ G S LV++Y +CG +DA ++F N ++ T MI+ Y
Sbjct: 480 KGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRN-LILWTAMISAY 538
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG E A E+F R M+ + + P+ +T +
Sbjct: 539 GMHGYGEAAVELFMR-------------------------------MKDEKIIPDHITFL 567
Query: 121 CVLSACSQLGALELGR 136
+L ACS G + G+
Sbjct: 568 ALLYACSHSGLVNEGK 583
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/487 (38%), Positives = 282/487 (57%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ IHG +K+G L+ +YGK G+ A +LF+ +P+ N
Sbjct: 156 GKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPN------------- 202
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
TV W ++I V NG +D F +M+R + +E TI+
Sbjct: 203 -------------------TVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILA 243
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L AC LG +L IH M + AL++ Y++ G + + VF E+ D
Sbjct: 244 LLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFAD 303
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ +++AG A HG EA+++F M N+G+ P VTF +L+ACSH GLV+ G F
Sbjct: 304 RVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFN 363
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M+ YGIEP+++HY C+VDLL R G +AY+ I NM + P+ + G+LL AC++HG +
Sbjct: 364 VMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNI 423
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LG+++A+ L++ D Y++LSN Y++S WK+A ++RA +KE G+++ PG SSIE
Sbjct: 424 ELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGYSSIEY 483
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N+ H F +GD HP+ E+IY K++EL ++ GYS TE VL D+E+ KE + HS
Sbjct: 484 GNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDVEEEVKEDMINKHS 543
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GL+ +K + + KNLR+C DCHS KLI+ I KR II+RD RFHHF +G
Sbjct: 544 EKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIIIRDPKRFHHFSDGF 603
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 604 CSCADYW 610
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 193/413 (46%), Gaps = 40/413 (9%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRP 114
++ CY + G E+A ++F + KD V W ++I G R M+ L F M+ + +V+P
Sbjct: 80 LVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRCLHMS--LTAFYTMKFEMSVKP 137
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
NEVTI+ ++SACS GAL+ G++IH + K L V +LINMY + GD+ A ++F
Sbjct: 138 NEVTILSMISACS--GALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLF 195
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
E + + + ++NS+IA +G + E ++ F +M GI + T + +L AC H G+
Sbjct: 196 EAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGK 255
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
L E + G +I ++D +++GR +Y T + A D + ++L+
Sbjct: 256 LA-ESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFA-DRVAWTAMLAG 313
Query: 295 CKIHG----KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA-G 349
HG ++L E +A + L+ D T+ L +A + SG E M E G
Sbjct: 314 YAAHGLGREAIKLFESMANKGLE---PDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYG 370
Query: 350 VQKEPGCSSIEVN--------NEIHEFI---------------LGDIRHPQREQIYKKMQ 386
++ S V+ N+ +E I LG R ++ K++
Sbjct: 371 IEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVA 430
Query: 387 ELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTI 439
E ++ +E P ++L ++ + W A L GL T Y++I
Sbjct: 431 E--HLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGYSSI 481
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 122/303 (40%), Gaps = 68/303 (22%)
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
E + +L A + ++ R IH+ + K + + +G L+ Y++ G + AL++F+
Sbjct: 39 EAIVSALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFD 98
Query: 176 EMKERDVTTYNSLIAGLA--MHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS----- 228
+M +D+ ++NSLI+G + +H M EM ++P +VT + +++ACS
Sbjct: 99 DMPHKDLVSWNSLISGFSRCLHMSLTAFYTMKFEM---SVKPNEVTILSMISACSGALDA 155
Query: 229 ----HGGLVDLG----FEIFQSMTRDYG---------------IEPQIEHYGCIVDLLSR 265
HG + +G ++ S+ YG +P + I+
Sbjct: 156 GKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVT 215
Query: 266 VGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQ---------------I 307
G E D+ M+ I D + +LL AC G +L E I
Sbjct: 216 NGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITI 275
Query: 308 AKRLLDCRS-----------------ADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
A LLD + AD + + YA+ G +EA+++ M G+
Sbjct: 276 ATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGL 335
Query: 351 QKE 353
+ +
Sbjct: 336 EPD 338
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/488 (37%), Positives = 296/488 (60%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+ +HG V+KLG+ L+ +YGK G F DA
Sbjct: 182 EGKSLHGVVVKLGMSGKAKVVNSLINMYGKLG-FLDA----------------------- 217
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
A ++F + V+ V W +M+ NG + +DLF M+R + P++ T+V
Sbjct: 218 --------ASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMV 269
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L AC+ G IH+Y+ + + + I+ AL+N+Y++ G ++ + +FEE+K+R
Sbjct: 270 ALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDR 329
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D + +++AG A+H EA+++F M+ +G+ VTF +L+ACSH GLV+ G + F
Sbjct: 330 DRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYF 389
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ M+ Y +EP+++HY C+VDLL R GR E+AY+ I +M + P + G+LL AC+++G
Sbjct: 390 EIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGN 449
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++LG+++A++LL +D Y++LSN Y+++G W++A ++RA MKE + + PGCS IE
Sbjct: 450 VELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIE 509
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
N+IH F++GD HP+ ++I+ K++EL + ++ G +P TE VLHDI++ K + H
Sbjct: 510 HGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKVDMINKH 569
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI +GL+ T + + KNLR+C DCHS K + + KR II+RD RFHHF +G
Sbjct: 570 SEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFADG 629
Query: 481 TCSCGDYW 488
CSC DYW
Sbjct: 630 LCSCRDYW 637
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 165/348 (47%), Gaps = 42/348 (12%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
IH +V+K S+ +LV +Y K G +DA +LFDEMP
Sbjct: 84 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPN------------------ 125
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR-PNEVTIVCVL 123
KD V W +++ GL G + L+ F M+ ++ R PNEVT++ V+
Sbjct: 126 --------------KDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVV 171
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
SAC+ +GAL+ G+ +H + K + V +LINMY + G +D A Q+FEEM R +
Sbjct: 172 SACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLV 231
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
++NS++ +G + + +++F M GI P + T V +L AC+ GL I +
Sbjct: 232 SWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYI 291
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG---- 299
R G I +++L +++GR + D +K D I ++L+ +H
Sbjct: 292 HR-CGFNADIIIATALLNLYAKLGRLNASEDIFEEIK-DRDRIAWTAMLAGYAVHACGRE 349
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
++L + + K ++ D T+ L +A + SG +E + M E
Sbjct: 350 AIKLFDLMVKEGVE---VDHVTFTHLLSACSHSGLVEEGKKYFEIMSE 394
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 117/265 (44%), Gaps = 38/265 (14%)
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
++V +S+C+ + IH+ + K + +G L++MY + G + A ++F+EM
Sbjct: 67 SLVFAISSCTSVSYCSA---IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 123
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMF-REMINQGIRPTKVTFVGVLNACS-------- 228
+D+ ++NSL++GL+ G + F R G +P +VT + V++AC+
Sbjct: 124 PNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEG 183
Query: 229 ---HGGLVDLGF----EIFQSMTRDYGIEPQIE---------------HYGCIVDLLSRV 266
HG +V LG ++ S+ YG ++ + +V + +
Sbjct: 184 KSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHN 243
Query: 267 GRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTY 322
G E+ D MK I PD + +LL AC G + E I + C +AD
Sbjct: 244 GYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIA 303
Query: 323 VLLSNAYASSGKWKEAVQIRAKMKE 347
L N YA G+ + I ++K+
Sbjct: 304 TALLNLYAKLGRLNASEDIFEEIKD 328
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/488 (40%), Positives = 277/488 (56%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR+IH Q G + S LV LY +CG K+A Y
Sbjct: 534 QGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEA----------------------Y 571
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+E F ++ KD++ W +I G ++G AL +F +M R + + T
Sbjct: 572 LE----------FEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFG 621
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+SA + + ++ G+ IH+ + K D + V ALI Y++CG I+ A + F EM E+
Sbjct: 622 SAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEK 681
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+ ++N++I G + HG EAV +F +M G P VTFVGVL+ACSH GLV G F
Sbjct: 682 NDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYF 741
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+SM++++G+ P+ HY C+VDL+SR G A FI M I PD + +LLSAC +H
Sbjct: 742 ESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKN 801
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+++GE A+ LL+ DS TYVLLSN YA SGKW Q R M+ GV+KEPG S IE
Sbjct: 802 VEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIE 861
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
V N +H F +GD HP ++IY+ + EL + GY +L+D+E +K+ + IH
Sbjct: 862 VKNSVHAFYVGDRLHPLADKIYEFLAELNKKAAEIGYFQDRYSLLNDVEQEQKDPTVYIH 921
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI +GL+S I V+KNLRVC DCHS IK ++ I+ R IIVRD RFHHFE G
Sbjct: 922 SEKLAITFGLLSLSDTVPIHVMKNLRVCKDCHSWIKFVSKISNRAIIVRDAYRFHHFEGG 981
Query: 481 TCSCGDYW 488
CSC DYW
Sbjct: 982 ICSCKDYW 989
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 155/340 (45%), Gaps = 39/340 (11%)
Query: 47 CNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
C+ ++ S +I Y ++GL+ +A +VF + KD+V W AMI G +NG A+ LF E
Sbjct: 145 CSPII-SNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCE 203
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M + P VLS C+++ ++G +H+ + K+ L V AL+ +YSR +
Sbjct: 204 MHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPN 263
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
A +VF +M+ +D ++NSLI+GLA G S A+E+F +M ++P VT +L+A
Sbjct: 264 FVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSA 323
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDL------------------------ 262
C+ G + G E S GI + G ++DL
Sbjct: 324 CASNGALCKG-EQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVL 382
Query: 263 -------LSRVGRPEEAYDFITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
++ E++ M+I P+ S+L C G L LGEQI +++
Sbjct: 383 WNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVI 442
Query: 313 DCRSADSGTYV--LLSNAYASSGKWKEAVQIRAKMKEAGV 350
YV +L + YA GK A I + E V
Sbjct: 443 K-TGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDV 481
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 167/339 (49%), Gaps = 18/339 (5%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D++ +++ YV ++ A E+F + ++ V W M+ + ++ + +FR+M
Sbjct: 347 SDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQM 406
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
Q + PN+ T +L C+ +GAL+LG IH+ + K N V LI+MY++ G +
Sbjct: 407 QIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKL 466
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
D A + + E DV ++ +LI+G A H EA++ F+EM+N+GI+ + F ++AC
Sbjct: 467 DTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISAC 526
Query: 228 SHGGLVDLGFEIF-QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
+ ++ G +I QS Y + I + +V L +R GR +EAY + A D I
Sbjct: 527 AGIQALNQGRQIHAQSYVSGYSEDLSIGN--ALVSLYARCGRIKEAYLEFEKID-AKDSI 583
Query: 287 MLGSLLSACKIHG----KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIR 342
L+S G L++ Q+ + L+ G+ V +A A+ K+ QI
Sbjct: 584 SWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAV---SAAANIANIKQGKQIH 640
Query: 343 AKMKEAGVQKEPGCSSIEVNNEIHEFIL--GDIRHPQRE 379
A + + G S IEV+N + F G I +RE
Sbjct: 641 AMIIKRGFD-----SDIEVSNALITFYAKCGSIEDARRE 674
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 153/345 (44%), Gaps = 74/345 (21%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
E +++HG++LKLG + KLV++Y G+ +++F++MP
Sbjct: 28 ECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPN-------------- 73
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ W +I G + R LDLF M +NV P E++
Sbjct: 74 ------------------RSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFA 115
Query: 121 CVLSACS--QLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
VL ACS ++G + IH+ + H + + I+ LI +Y++ G I A +VF+ +
Sbjct: 116 SVLRACSGHRIG-IRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLC 174
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
+D ++ ++I+G + +G EA+ +F EM GI PT F VL+ C+ L D+G E
Sbjct: 175 TKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVG-E 233
Query: 239 IFQSMTRDYGIEPQIEHYGC--IVDLLSRV------------------------------ 266
++ YG +E Y C +V L SR+
Sbjct: 234 QLHALVFKYG--SSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQ 291
Query: 267 -GRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQI 307
G + A + T MK + PD + + SLLSAC +G L GEQ+
Sbjct: 292 QGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQL 336
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 159/372 (42%), Gaps = 68/372 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++H V K G LV LY + F A ++F +M + D V+ +I+
Sbjct: 232 GEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKM-QSKDEVSFNSLISGLA 290
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G + A E+F++ M+RD ++P+ VT+
Sbjct: 291 QQGFSDGALELFTK-------------------------------MKRDYLKPDCVTVAS 319
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+LSAC+ GAL G +HSY+ K I + IV GAL+++Y C DI A ++F + +
Sbjct: 320 LLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTEN 379
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +N ++ E+ +FR+M +G+ P + T+ +L C+ G +DLG +I
Sbjct: 380 VVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHT 439
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAY---------DFIT--------------- 277
+ + G + + ++D+ ++ G+ + A+ D ++
Sbjct: 440 QVIKT-GFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFA 498
Query: 278 ----------NMKIAPDHIMLGSLLSACKIHGKLQLGEQI-AKRLLDCRSADSGTYVLLS 326
N I D+I S +SAC L G QI A+ + S D L
Sbjct: 499 EALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALV 558
Query: 327 NAYASSGKWKEA 338
+ YA G+ KEA
Sbjct: 559 SLYARCGRIKEA 570
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 115/281 (40%), Gaps = 47/281 (16%)
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M+ + N T + +L C G+L + +H + K ++ L+++Y GD
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+D ++VFE+M R V +++ +I+G S +++F MI + + PT+++F VL A
Sbjct: 61 LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120
Query: 227 CS------------------HG------------------GLVDLGFEIFQSMTRDYGIE 250
CS HG GL+ ++F ++ +
Sbjct: 121 CSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVS 180
Query: 251 PQIEHYGCIVDLLSRVGRPEEAYDFITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQI 307
+ ++ S+ G EEA M A P + S+LS C +GEQ+
Sbjct: 181 -----WVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQL 235
Query: 308 AKRLLDCRSADSGTYV--LLSNAYASSGKWKEAVQIRAKMK 346
+ S+ TYV L Y+ + A ++ +KM+
Sbjct: 236 HALVFKYGSSLE-TYVCNALVTLYSRMPNFVSAEKVFSKMQ 275
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/441 (40%), Positives = 269/441 (60%), Gaps = 1/441 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D++ +I+ Y E G +++ +F RV+ KD V WT+MI+ NG + A+ LF EMQ
Sbjct: 501 DLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQ 560
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ N++P+ V +V +L A + L +L G+ +H ++ + + V +L++MYS CG ++
Sbjct: 561 KANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMN 620
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A++VFE K +DV + ++I MHG +A+++F+ M+ G+ P V+F+ +L ACS
Sbjct: 621 YAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYACS 680
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H LV+ G M Y ++P EHY C+VD+L R G+ EEAY+FI M + P +
Sbjct: 681 HSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTMPMDPKSAVW 740
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+LL AC++H L A +LL+ + G Y+L+SN +A GKW A + R +M E
Sbjct: 741 CALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMGKWNNAKETRTRMAER 800
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLE-GYSPSTEVVLHD 407
G++K P CS IE+ N IH F GD H E I+ K+ E+ ++++ E GY T VLHD
Sbjct: 801 GLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEMLRREGGYVEDTRFVLHD 860
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
+ EK L HSER+AI +GLIST+P IR+ KNLRVC DCH KL++ + +R I+
Sbjct: 861 TSEEEKIDMLHKHSERIAIAFGLISTRPGMPIRIAKNLRVCGDCHEFTKLVSKLFERDIV 920
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
VRD NRFHHF G+CSC D+W
Sbjct: 921 VRDANRFHHFSGGSCSCEDFW 941
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 145/301 (48%), Gaps = 43/301 (14%)
Query: 1 EGREIHGQVLKLG-LRSNRSTRL--KLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMI 57
EGR++H + G L + L KLV +YG+CG DA +LF+ MP
Sbjct: 75 EGRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMP------------ 122
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV---RP 114
A VFS W A++ + +G A+ ++ M+ P
Sbjct: 123 -----------ARTVFS---------WNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAP 162
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
+ T+ VL AC G G +H K +D + +V ALI MY++CG +D AL+VF
Sbjct: 163 DGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVF 222
Query: 175 EEMKE--RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
E +++ RDV ++NS+++G +GR++EA+ +FR M + G T V VL C+ GL
Sbjct: 223 EWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGL 282
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
+ LG E+ ++ + G E I+ +V + ++ GR + A + D+I S+L
Sbjct: 283 LSLGRELHAALLK-CGSELNIQCNALLV-MYAKYGRVDSALRVFGQIA-EKDYISWNSML 339
Query: 293 S 293
S
Sbjct: 340 S 340
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 171/390 (43%), Gaps = 46/390 (11%)
Query: 2 GREIHGQVLKLGLRS-----NRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDV--VAST 54
GR + L G++S N T + ++++ + G +L + +C +
Sbjct: 246 GRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQCN 305
Query: 55 VMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP 114
++ Y ++G V++A VF ++ KD + W +M+ V+N A A+D F EM + +P
Sbjct: 306 ALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQP 365
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
+ +V + SA L L GR H+Y K R+ + VG L++MY +CG I+ + +VF
Sbjct: 366 DHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVF 425
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS------ 228
E M RD ++ +++A A R EA+EM E+ +GI + +L C
Sbjct: 426 ESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSIS 485
Query: 229 ----------HGGLVDLGFEIFQSMTRDYGIEPQIEH---------------YGCIVDLL 263
GL+DL E + YG + +H + +++
Sbjct: 486 LLKQVHCYAIRNGLLDLILE--NRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCC 543
Query: 264 SRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG 320
+ GR A T M+ I PD + L S+L A L G+Q+ L+ G
Sbjct: 544 TNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEG 603
Query: 321 TYV-LLSNAYASSGKWKEAVQI--RAKMKE 347
V L + Y+ G A+++ RAK K+
Sbjct: 604 PVVSSLVDMYSGCGSMNYAIRVFERAKCKD 633
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 186/451 (41%), Gaps = 120/451 (26%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G E+HG +K+GL + L+ +Y KCG
Sbjct: 183 GGEVHGLAVKVGLDKSTLVANALIGMYAKCG----------------------------- 213
Query: 62 EHGLVENAFEVFSRVK--VKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
L+++A VF ++ +D W +++ G V+NG AL LFR MQ N T
Sbjct: 214 ---LLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTS 270
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V VL C++LG L LGR +H+ + K +LN I AL+ MY++ G +D AL+VF ++ E
Sbjct: 271 VAVLQVCAELGLLSLGRELHAALLKCGSELN-IQCNALLVMYAKYGRVDSALRVFGQIAE 329
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH---------- 229
+D ++NS+++ + EA++ F EM+ G +P V + +A H
Sbjct: 330 KDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREF 389
Query: 230 -------------------------GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLS 264
G ++ ++F+SM GI I + I+ +
Sbjct: 390 HAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESM----GIRDHIS-WTTILACFA 444
Query: 265 RVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQI-------------- 307
+ R EA + I ++ I D +M+GS+L C + L +Q+
Sbjct: 445 QSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGLLDLIL 504
Query: 308 AKRLLD----CRSADSG-------------TYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
RL+D C D ++ + N ++G+ AV + +M++A +
Sbjct: 505 ENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANI 564
Query: 351 QKE-----------PGCSSIEVNNEIHEFIL 370
Q + G SS+ ++H F++
Sbjct: 565 QPDSVALVSILVAIAGLSSLTKGKQVHGFLI 595
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 80/178 (44%), Gaps = 33/178 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+++HG +++ LV++Y CG A+++F E +C DVV T MIN
Sbjct: 586 KGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVF-ERAKCKDVVLWTAMINAT 644
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG +G+ +A+DLF+ M + + P+ V+ +
Sbjct: 645 GMHG-----------------------------HGK--QAIDLFKRMLQTGLTPDHVSFL 673
Query: 121 CVLSACSQLGALELGR-WIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+L ACS +E G+ ++ + K+R+ ++++ R G ++A + + M
Sbjct: 674 ALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTM 731
>gi|218196348|gb|EEC78775.1| hypothetical protein OsI_19008 [Oryza sativa Indica Group]
Length = 580
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/493 (39%), Positives = 284/493 (57%), Gaps = 45/493 (9%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
++H VL+LG+ ++ L++ Y KCG+ A ++FDEM
Sbjct: 125 QLHALVLRLGVAADVRLLTTLLDSYAKCGDLASARKVFDEM------------------- 165
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR------DNVRPNEV 117
V+D W +++ GL + E AL LF + PNEV
Sbjct: 166 -------------TVRDVATWNSLLAGLAQGTEPNLALALFHRLANSFQELPSREEPNEV 212
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
TIV LSAC+Q+G L+ G ++H + + +D N V +LI+MYS+CG + +AL VF +
Sbjct: 213 TIVAALSACAQIGLLKDGMYVHEFAKRFGLDRNVRVCNSLIDMYSKCGSLSRALDVFHSI 272
Query: 178 KERDVT--TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
K D T +YN+ I +MHG +A+ +F EM + I P VT++ VL C+H GLVD
Sbjct: 273 KPEDRTLVSYNAAIQAHSMHGHGGDALRLFDEMPTR-IEPDGVTYLAVLCGCNHSGLVDD 331
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G +F SM + P ++HYG IVDLL R GR EAYD + +M D ++ +LL A
Sbjct: 332 GLRVFNSMR----VAPNMKHYGTIVDLLGRAGRLTEAYDTVISMPFPADIVLWQTLLGAA 387
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
K+HG ++L E A +L + S G YVLLSN YAS +W + ++R M+ V+K PG
Sbjct: 388 KMHGVVELAELAANKLAELGSNVDGDYVLLSNVYASKARWMDVGRVRDTMRSNDVRKVPG 447
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
S E++ +H+FI GD HP+ ++IY+ ++++ + GY P T VLHDI + EK++
Sbjct: 448 FSYTEIDGVMHKFINGDKEHPRWQEIYRALEDIVSRISELGYEPETSNVLHDIGEEEKQY 507
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
AL HSE+LAI +GLI+T P T+RV+KNLR+C DCH + KLI+ R I++RDR RFH
Sbjct: 508 ALCYHSEKLAIAFGLIATPPGETLRVIKNLRICGDCHVVAKLISKAYGRVIVIRDRARFH 567
Query: 476 HFENGTCSCGDYW 488
FE+G CSC DYW
Sbjct: 568 RFEDGQCSCRDYW 580
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 78/198 (39%), Gaps = 37/198 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEM-PECNDVVASTVMINC 59
+G +H + GL N L+++Y KCG A+ +F + PE +V+ I
Sbjct: 229 DGMYVHEFAKRFGLDRNVRVCNSLIDMYSKCGSLSRALDVFHSIKPEDRTLVSYNAAIQA 288
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
+ HG G+ AL LF EM + P+ VT
Sbjct: 289 HSMHG----------------------------HGGD---ALRLFDEMP-TRIEPDGVTY 316
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
+ VL C+ G ++ G + + M R+ N G ++++ R G + +A M
Sbjct: 317 LAVLCGCNHSGLVDDGLRVFNSM---RVAPNMKHYGTIVDLLGRAGRLTEAYDTVISMPF 373
Query: 179 ERDVTTYNSLIAGLAMHG 196
D+ + +L+ MHG
Sbjct: 374 PADIVLWQTLLGAAKMHG 391
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/433 (40%), Positives = 266/433 (61%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+I+ Y + G ++ A +VF + D + T M+ L + A+ LF +M R + P+
Sbjct: 450 LIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPD 509
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
+ +L+AC+ L A E G+ +H+++ K + + G AL+ Y++CG I+ A F
Sbjct: 510 SFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFS 569
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
+ ER + +++++I GLA HG A+++F M+++G+ P +T VL+AC+H GLVD
Sbjct: 570 GLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDD 629
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
+ F+SM +GI+ EHY C++D+L R G+ E+A + + NM + + G+LL A
Sbjct: 630 AKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGAS 689
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
++H +LG A++L SGT+VLL+N YAS+G W E ++R MK++ V+KEP
Sbjct: 690 RVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPA 749
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
S +E+ +++H FI+GD HP IY K+ EL ++ GY P+ EV LHD++ EKE
Sbjct: 750 MSWVEIKDKVHTFIVGDKSHPMTRDIYGKLAELGDLMNKAGYVPNVEVDLHDVDRSEKEL 809
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
L+ HSERLA+ + LIST IRV KNLR+C DCH K I+ I R+II+RD NRFH
Sbjct: 810 LLSHHSERLAVAFALISTPSGAPIRVKKNLRICRDCHVAFKYISKIVSREIIIRDINRFH 869
Query: 476 HFENGTCSCGDYW 488
HF NGTCSCGDYW
Sbjct: 870 HFTNGTCSCGDYW 882
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 140/277 (50%), Gaps = 16/277 (5%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSR-VKV---KDTVCWTAMIDGLVRNGEMARALDL 103
+DV + ++ Y G+V+ A +F V V ++ V W MI V+N + A+ +
Sbjct: 133 HDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGV 192
Query: 104 FREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSR 163
FREM RPNE CV++AC+ LE GR +H + + + + AL++MYS+
Sbjct: 193 FREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSK 252
Query: 164 CGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGV 223
GDI+ A VFE+M DV ++N+ I+G HG A+E+ +M + G+ P T V
Sbjct: 253 LGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSV 312
Query: 224 LNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMK 280
L AC+ G +LG +I M + + G +VD+ ++ G ++A +DF+
Sbjct: 313 LKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVG-LVDMYAKHGFLDDARKVFDFMPRR- 370
Query: 281 IAPDHIMLGSLLSACKIHGK----LQLGEQIAKRLLD 313
D I+ +L+S C G+ L L ++ K LD
Sbjct: 371 ---DLILWNALISGCSHDGRHGEVLSLFHRMRKEGLD 404
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 167/388 (43%), Gaps = 74/388 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++HG V++ G + T LV++Y K G+
Sbjct: 224 GRQVHGAVVRTGYEKDVFTANALVDMYSKLGD---------------------------- 255
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+E A VF ++ D V W A I G V +G RAL+L +M+ + PN T+
Sbjct: 256 ----IEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSS 311
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL AC+ GA LGR IH +M K D + V L++MY++ G +D A +VF+ M RD
Sbjct: 312 VLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRD 371
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQG--IRPTKVTFVGVLNAC------------ 227
+ +N+LI+G + GR E + +F M +G + + T VL +
Sbjct: 372 LILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQV 431
Query: 228 ------------SH--GGLVDLGFEIFQSMTRDYGIE-------PQIEHYGCIVDLLSRV 266
SH GL+D ++ Q DY I+ I ++ LS+
Sbjct: 432 HALAEKIGLLSDSHVINGLIDSYWKCGQ---LDYAIKVFKESRSDDIISSTTMMTALSQC 488
Query: 267 GRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTY 322
E+A M + PD +L SLL+AC + G+Q+ L+ + ++D
Sbjct: 489 DHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAG 548
Query: 323 VLLSNAYASSGKWKEAVQIRAKMKEAGV 350
L AYA G ++A + + E G+
Sbjct: 549 NALVYAYAKCGSIEDADMAFSGLPERGI 576
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 134/302 (44%), Gaps = 43/302 (14%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H +LK GL + S L + LY +C A +FDE+P+ C+V
Sbjct: 23 GAHLHSHLLKSGLLAGFSNHL--LTLYSRCRLPSAARAVFDEIPD-----------PCHV 69
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
W++++ NG AL FR M+ V NE +
Sbjct: 70 S---------------------WSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPV 108
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM---- 177
VL + G +H+ R+ + V AL+ +Y G +D+A ++F+E
Sbjct: 109 VLKCAPD---VRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVG 165
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
ER+ ++N++I+ + +S +A+ +FREM+ G RP + F V+NAC+ ++ G
Sbjct: 166 GERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGR 225
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
++ ++ R G E + +VD+ S++G E A M A D + + +S C
Sbjct: 226 QVHGAVVRT-GYEKDVFTANALVDMYSKLGDIEMAATVFEKMP-AADVVSWNAFISGCVT 283
Query: 298 HG 299
HG
Sbjct: 284 HG 285
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 108/233 (46%), Gaps = 8/233 (3%)
Query: 8 QVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPE---CNDVVASTVMINCYVEHG 64
Q+L+ GL + L+ ++ Q+ + + +DV A ++ Y + G
Sbjct: 500 QMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCG 559
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
+E+A FS + + V W+AMI GL ++G RALDLF M + V PN +T+ VLS
Sbjct: 560 SIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLS 619
Query: 125 ACSQLGAL-ELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-ERDV 182
AC+ G + + ++ S ID +I++ R G ++ A+++ M + +
Sbjct: 620 ACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANA 679
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKV-TFVGVLNACSHGGLVD 234
+ +L+ +H R E M E + + P K T V + N + G+ D
Sbjct: 680 AVWGALLGASRVH-RDPELGRMAAEKLFT-LEPEKSGTHVLLANTYASAGMWD 730
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/488 (39%), Positives = 275/488 (56%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG++IH Q G S+ + LV LY KCG
Sbjct: 592 EGQQIHAQACVSGFSSDLPFQNALVTLYSKCGN--------------------------- 624
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+E A+ F + + D + W A++ G ++G AL +F M R+ + N T
Sbjct: 625 -----IEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFG 679
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+ A S+ ++ G+ +H+ + K D V A+I+MY++CG I A + F E+ +
Sbjct: 680 SAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMK 739
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+ ++N++I + HG EA++ F +MI+ +RP VT VGVL+ACSH GLVD G E F
Sbjct: 740 NEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYF 799
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+SM +YG+ P+ EHY C+VD+L+R G A DFI M I PD ++ +LLSAC +H
Sbjct: 800 ESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHKN 859
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+++GE A LL+ DS TYVLLSN YA KW R KMKE GV+KEPG S IE
Sbjct: 860 MEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIE 919
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
V N IH F +GD HP ++I++ ++L + GY +L +++ +K+ + IH
Sbjct: 920 VKNSIHSFYVGDQNHPLADEIHEYFKDLTKRASEIGYVQDCFSLLSELQQEQKDPTIFIH 979
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI +GL+S I V+KNLRVCNDCH IK ++ ++ R+IIVRD RFHHFE G
Sbjct: 980 SEKLAISFGLLSLPATMPINVMKNLRVCNDCHDWIKFVSKVSNREIIVRDAYRFHHFEGG 1039
Query: 481 TCSCGDYW 488
CSC DYW
Sbjct: 1040 ACSCKDYW 1047
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 154/354 (43%), Gaps = 37/354 (10%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H KLG SN L+ LY KC +
Sbjct: 391 GQQLHAYTTKLGFASNDKIEGALLNLYAKCSD---------------------------- 422
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+E A F +V++ V W M+ ++ + +FR+MQ + + PN+ T
Sbjct: 423 ----IETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPS 478
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L C +LG LELG IHS + K LN V LI+MY++ G +D A + +D
Sbjct: 479 ILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKD 538
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ ++IAG + +A+ FR+M+++GIR +V ++AC+ + G +I
Sbjct: 539 VVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHA 598
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
G + +V L S+ G EEAY + A D+I +L+S + G
Sbjct: 599 QACVS-GFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTE-AGDNIAWNALVSGFQQSGNN 656
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASS--GKWKEAVQIRAKMKEAGVQKE 353
+ ++ R ++ DS + S A+S K+ Q+ A + + G E
Sbjct: 657 EEALRVFAR-MNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSE 709
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 133/277 (48%), Gaps = 37/277 (13%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++HG VLKLG S+ LV LY G A
Sbjct: 290 GEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISA------------------------ 325
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
EH +FS + +D V + +I+GL + G +A++LF+ MQ D + P+ T+
Sbjct: 326 EH--------IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLAS 377
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
++ ACS G L G+ +H+Y K N + GAL+N+Y++C DI+ AL F E + +
Sbjct: 378 LVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVEN 437
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +N ++ + + +FR+M + I P + T+ +L C G ++LG +I
Sbjct: 438 VVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHS 497
Query: 242 SMTRDYGIEPQIEHYGC--IVDLLSRVGRPEEAYDFI 276
+ + Q+ Y C ++D+ +++G+ + A+D +
Sbjct: 498 QIIK---TSFQLNAYVCSVLIDMYAKLGKLDTAWDIL 531
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 38/322 (11%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+I+ Y +G V+ A VF + +KD W AMI GL +N A+ LF +M + P
Sbjct: 211 LIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPT 270
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
VLSAC ++ +LE+G +H + K + V AL+++Y G + A +F
Sbjct: 271 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFS 330
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
M +RD TYN+LI GL+ G +A+E+F+ M G+ P T ++ ACS G +
Sbjct: 331 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFS 390
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM---------------- 279
G ++ + T G + G +++L ++ E A ++
Sbjct: 391 GQQL-HAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYG 449
Query: 280 ------------------KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT 321
+I P+ S+L C G L+LGEQI +++ S
Sbjct: 450 LLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK-TSFQLNA 508
Query: 322 YV--LLSNAYASSGKWKEAVQI 341
YV +L + YA GK A I
Sbjct: 509 YVCSVLIDMYAKLGKLDTAWDI 530
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 151/346 (43%), Gaps = 76/346 (21%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR++H Q+LKLG +N KL++ Y LF
Sbjct: 86 EGRKLHSQILKLGFDNNACLSEKLLDFY-----------LF------------------- 115
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G ++ A +VF + + W MI L + LF M +NV PNE T
Sbjct: 116 --KGDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFS 173
Query: 121 CVLSACSQLG-ALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
VL AC A ++ IH+ + + + IV LI++YSR G +D+A +VF+ +
Sbjct: 174 GVLEACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYL 233
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS----------- 228
+D +++ ++I+GL+ + +EA+ +F +M GI PT F VL+AC
Sbjct: 234 KDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL 293
Query: 229 HGGLVDLGFE------------------------IFQSMTRDYGIEPQIEHYGCIVDLLS 264
HG ++ LGF IF +M++ + Y +++ LS
Sbjct: 294 HGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVT-----YNTLINGLS 348
Query: 265 RVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQI 307
+ G E+A + M+ + PD L SL+ AC G L G+Q+
Sbjct: 349 QCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQL 394
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 123/273 (45%), Gaps = 38/273 (13%)
Query: 112 VRPNEVTIVCVLSACSQL-GALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
+RPN T+ +L C + G+L+ GR +HS + K D N + L++ Y GD+D A
Sbjct: 63 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGA 122
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
L+VF+EM ER + T+N +I LA S + +F M+N+ + P + TF GVL AC G
Sbjct: 123 LKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGG 182
Query: 231 GLVDLGFE------IFQSMTRDYGI-EPQIEHY---------------------GCIVDL 262
+ E I+Q + + + P I+ Y V +
Sbjct: 183 SVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAM 242
Query: 263 LSRVGRPE---EAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRS 316
+S + + E EA +M I P S+LSACK L++GEQ+ +L
Sbjct: 243 ISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL-G 301
Query: 317 ADSGTYV--LLSNAYASSGKWKEAVQIRAKMKE 347
S TYV L + Y G A I + M +
Sbjct: 302 FSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQ 334
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/433 (40%), Positives = 266/433 (61%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+I+ Y + + +A VF D + T+MI L + A+ LF EM R + P+
Sbjct: 445 LIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPD 504
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
+ +L+AC+ L A E G+ +H+++ K + + G AL+ Y++CG I+ A F
Sbjct: 505 PFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFS 564
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
+ ER V +++++I GLA HG A+E+F M+++GI P +T VL AC+H GLVD
Sbjct: 565 SLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDE 624
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
F SM +GI+ EHY C++DLL R G+ ++A + + +M + + G+LL A
Sbjct: 625 AKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGAS 684
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
++H +LG+ A++L SGT+VLL+N YASSG W E ++R MK++ ++KEP
Sbjct: 685 RVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPA 744
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
S +EV +++H FI+GD HP ++IY K+ EL ++ GY P+ +V LHD++ EKE
Sbjct: 745 MSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKEL 804
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
L+ HSERLA+ + L+ST P IRV KNLR+C DCH K I+NI R+II+RD NRFH
Sbjct: 805 LLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFH 864
Query: 476 HFENGTCSCGDYW 488
HF +GTCSCGDYW
Sbjct: 865 HFRDGTCSCGDYW 877
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 155/338 (45%), Gaps = 38/338 (11%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV + +++ YV+ G V+ A +F ++ D V W A+I G V NG RA++L +M+
Sbjct: 236 DVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMK 295
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ PN + +L AC+ GA +LGR IH +M K D + +G L++MY++ +D
Sbjct: 296 SSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLD 355
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A++VF+ M RD+ +N+LI+G + GR EA +F + +G+ + T VL + +
Sbjct: 356 DAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTA 415
Query: 229 -----------HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVD---------------- 261
H +GF IF + + G+ C+ D
Sbjct: 416 SLEAASATRQVHALAEKIGF-IFDAHVVN-GLIDSYWKCSCLSDAIRVFEECSSGDIIAV 473
Query: 262 -----LLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
LS+ E A M + PD +L SLL+AC + G+Q+ L+
Sbjct: 474 TSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIK 533
Query: 314 CR-SADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
+ +D+ L YA G ++A + + E GV
Sbjct: 534 RQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGV 571
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 139/302 (46%), Gaps = 39/302 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++H + G S+ LV +YG G DA ++FDE
Sbjct: 119 GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEA----------------- 161
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G NA V W ++ V+N + A+ +F EM ++P E C
Sbjct: 162 --GSERNA------------VSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSC 207
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V++AC+ ++ GR +H+ + + + + AL++MY + G +D A +FE+M + D
Sbjct: 208 VVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSD 267
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++N+LI+G ++G A+E+ +M + G+ P +L AC+ G DLG +I
Sbjct: 268 VVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHG 327
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIH 298
M + G +VD+ ++ ++A +D++++ D I+ +L+S C
Sbjct: 328 FMIKANADSDDYIGVG-LVDMYAKNHFLDDAMKVFDWMSHR----DLILWNALISGCSHG 382
Query: 299 GK 300
G+
Sbjct: 383 GR 384
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 159/377 (42%), Gaps = 76/377 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H +LK G + S R L+ Y KC A ++FDE+P+ C+V
Sbjct: 23 GAHLHANLLKSGFLA--SLRNHLISFYSKCRRPCCARRVFDEIPD-----------PCHV 69
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
W++++ NG A+ F M+ + V NE +
Sbjct: 70 S---------------------WSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPV 108
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM-KER 180
VL +LG +H+ + V AL+ MY G +D A +VF+E ER
Sbjct: 109 VLKCVPD---AQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSER 165
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+ ++N L++ + + +A+++F EM+ GI+PT+ F V+NAC+ +D G ++
Sbjct: 166 NAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQV- 224
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGR-----------PEE------------------ 271
+M G E + +VD+ ++GR P+
Sbjct: 225 HAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHD 284
Query: 272 --AYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTY--VL 324
A + + MK + P+ ML S+L AC G LG QI ++ +ADS Y V
Sbjct: 285 HRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKA-NADSDDYIGVG 343
Query: 325 LSNAYASSGKWKEAVQI 341
L + YA + +A+++
Sbjct: 344 LVDMYAKNHFLDDAMKV 360
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 138/329 (41%), Gaps = 38/329 (11%)
Query: 8 QVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMINCYVEHG 64
Q+ GL N +++ G F Q+ M + N D +++ Y ++
Sbjct: 293 QMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNH 352
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
+++A +VF + +D + W A+I G G A +F ++++ + N T+ VL
Sbjct: 353 FLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLK 412
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLN-HIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
+ + L A R +H+ K + H+V G LI+ Y +C + A++VFEE D+
Sbjct: 413 STASLEAASATRQVHALAEKIGFIFDAHVVNG-LIDSYWKCSCLSDAIRVFEECSSGDII 471
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF--- 240
S+I L+ A+++F EM+ +G+ P +LNAC+ + G ++
Sbjct: 472 AVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHL 531
Query: 241 ---QSMTRDYGIEPQIEHY---GCIVDL---------------------LSRVGRPEEAY 273
Q M+ + + Y G I D L++ G + A
Sbjct: 532 IKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRAL 591
Query: 274 DFITNM---KIAPDHIMLGSLLSACKIHG 299
+ M I P+HI + S+L AC G
Sbjct: 592 ELFGRMVDEGINPNHITMTSVLCACNHAG 620
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 2/150 (1%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D A ++ Y + G +E+A FS + + V W+AMI GL ++G RAL+LF M
Sbjct: 538 SDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRM 597
Query: 108 QRDNVRPNEVTIVCVLSACSQLGAL-ELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
+ + PN +T+ VL AC+ G + E R+ +S ID +I++ R G
Sbjct: 598 VDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGK 657
Query: 167 IDKALQVFEEMK-ERDVTTYNSLIAGLAMH 195
+D A+++ M + + + + +L+ +H
Sbjct: 658 LDDAMELVNSMPFQANASVWGALLGASRVH 687
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/489 (39%), Positives = 290/489 (59%), Gaps = 34/489 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+IH +K S+ L+++Y K G DA +F +PE
Sbjct: 182 GRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPE--------------- 226
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+D V TA+I G + G AL LFR++Q + + N VT
Sbjct: 227 -----------------RDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYAS 269
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL+A S L AL G+ +HS++ + ++ +LI+MYS+CG++ A ++F+ M ER
Sbjct: 270 VLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERT 329
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSHGGLVDLGFEIF 240
++N+++ G + HG + E +E+F+ M + ++P +T++ VL+ CSHG L D+G EIF
Sbjct: 330 CISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIF 389
Query: 241 QSMTRDY-GIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+M GIEP I HYGC+VDLL R GR EEA+DFI M P + GSLL +C++H
Sbjct: 390 YNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHS 449
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+++G + ++LL+ ++G YV+LSN YAS+GKW++ IR M+E V KEPG S +
Sbjct: 450 DVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWV 509
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E++ +H F D HP+RE++ K++EL K +GY P VL+D+++ +KE L
Sbjct: 510 ELDQIVHTFHASDHTHPRREEVANKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLG 569
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LA+ +GLI+T TTIRV+KNLR+C DCHS K ++ + R +I+RD+NRFH+
Sbjct: 570 HSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSFAKFVSRLYARTVILRDKNRFHNIVG 629
Query: 480 GTCSCGDYW 488
G CSCGDYW
Sbjct: 630 GVCSCGDYW 638
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 165/384 (42%), Gaps = 73/384 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+ +H ++K + R +L+ LY KC DA +FDEMP+
Sbjct: 80 EGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQ-------------- 125
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++ V WTAMI + G AL+LF EM R + PN T
Sbjct: 126 ------------------RNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFA 167
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L++C E GR IHS K + + VG +L++MY++ G I A VF + ER
Sbjct: 168 TILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPER 227
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++I+G A G EA+++FR++ +G+ VT+ VL A S ++ G ++
Sbjct: 228 DVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVH 287
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGR-----------PE------------------- 270
+ R G + ++D+ S+ G PE
Sbjct: 288 SHVLRS-GQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMA 346
Query: 271 -EAYDFITNM----KIAPDHIMLGSLLSACKIHGKLQ-LGEQIAKRLLDCRSA---DSGT 321
E + M K+ PD I ++LS C HG+L+ +G +I +++ + D G
Sbjct: 347 REVLELFKLMREENKVKPDSITYLAVLSGCS-HGQLEDMGLEIFYNMVNGKDGIEPDIGH 405
Query: 322 YVLLSNAYASSGKWKEAVQIRAKM 345
Y + + +G+ +EA KM
Sbjct: 406 YGCVVDLLGRAGRVEEAFDFIKKM 429
>gi|218186365|gb|EEC68792.1| hypothetical protein OsI_37341 [Oryza sativa Indica Group]
Length = 960
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/465 (39%), Positives = 279/465 (60%), Gaps = 23/465 (4%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
L+ ++ +CG ++FD + D+ A +++ Y +R+ +D C
Sbjct: 519 LLGVFARCGRIASCRRVFDRIAH-PDLPAWNALLSAY-------------ARLCARDVAC 564
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
T+ D + L+LF M + PNE+T+V V+ AC +LGA+ G W H+Y
Sbjct: 565 ATSAADAI---------LELFVRMLSLAIEPNEITLVAVIGACGELGAVSHGVWAHTYAV 615
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
K R+ +N IV AL+ MY+ CG +D A QVF + +RD YN+++ GLA+HG A+
Sbjct: 616 KRRLAVNCIVATALVEMYAGCGRLDLAEQVFAAVSDRDTRCYNAMLHGLAVHGHGRAALS 675
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
+ M G+ VT + V+ AC+H GLVD G + F M ++GIEP+IEHYGC++D+L
Sbjct: 676 LLDRMHGAGVPVDGVTVLSVMCACAHAGLVDEGLDYFDRMEIEFGIEPRIEHYGCMIDML 735
Query: 264 SRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV 323
SR G+ A I M I P+ + SL+ AC IHGKL+LGE++ L+ DSG +V
Sbjct: 736 SRAGQLNNAEKLIHEMLIVPNAAIYRSLIRACGIHGKLELGEKMIAELMRLEPDDSGNHV 795
Query: 324 LLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYK 383
L+SN YA + +W++A + R +MK G+ K PG S +++N +HEF++GD HP ++IY
Sbjct: 796 LISNFYARTNRWEDAKKARKEMKSMGIDKNPGSSLVDINGVLHEFLVGDKTHPASKEIYT 855
Query: 384 KMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVK 443
++E++ + G ST L D+E+ +K L+ HSERLAI + LI++ P IR++K
Sbjct: 856 MVEEIETRLIECGRRSSTSSALFDVEEEDKADTLSYHSERLAIAFALIASNPGAPIRIIK 915
Query: 444 NLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
NLRVC DCH KL++ + R+I++RDR RFHHF +G CSCGD+W
Sbjct: 916 NLRVCADCHESAKLVSRVYGREIVMRDRTRFHHFRDGVCSCGDFW 960
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 92/219 (42%), Gaps = 45/219 (20%)
Query: 141 YMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLA-MHGRSI 199
++G H + ++G AL+ +++RCG I +VF+ + D+ +N+L++ A + R +
Sbjct: 503 FLGAHAASCDRVLGAALLGVFARCGRIASCRRVFDRIAHPDLPAWNALLSAYARLCARDV 562
Query: 200 EA--------VEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEP 251
+E+F M++ I P ++T V V+ AC G V G
Sbjct: 563 ACATSAADAILELFVRMLSLAIEPNEITLVAVIGACGELGAVSHGV-------------- 608
Query: 252 QIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
A+ + ++A + I+ +L+ G+L L EQ+ +
Sbjct: 609 -------------------WAHTYAVKRRLAVNCIVATALVEMYAGCGRLDLAEQVFAAV 649
Query: 312 LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
D D+ Y + + A G + A+ + +M AGV
Sbjct: 650 SD---RDTRCYNAMLHGLAVHGHGRAALSLLDRMHGAGV 685
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/492 (38%), Positives = 293/492 (59%), Gaps = 21/492 (4%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H LK G L+ LY KCG+ ++A +F M E D+V+ T MI Y
Sbjct: 380 GRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSE-RDIVSWTSMITAYS 438
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPNEVTIV 120
+ G + A E F + ++ + W AM+ +++G L ++ M + +V P+ VT V
Sbjct: 439 QIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYV 498
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+ C+ +GA +LG I + K + LN V A I MYS+CG I +A ++F+ + +
Sbjct: 499 TLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGK 558
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++N++I G + HG +A + F +M+++G +P +++V VL+ CSH GLV G F
Sbjct: 559 DVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYF 618
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
MTR +GI P +EH+ C+VDLL R G EA D I M + P + G+LLSACKIHG
Sbjct: 619 DMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGN 678
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+L E AK + + S DSG+Y+LL+ Y+ +GK ++ Q+R M++ G++K PG S +E
Sbjct: 679 DELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWME 738
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGY----SPSTEVVLHDIEDWEKEWA 416
V N++H F D+ HPQ I KM EL + + GY SP +E+ H
Sbjct: 739 VENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYVRTESPRSEI--H---------- 786
Query: 417 LAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHH 476
HSE+LA+ +G++S + I ++KNLR+C DCH++IKLI+++T R+ ++RD RFHH
Sbjct: 787 ---HSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHH 843
Query: 477 FENGTCSCGDYW 488
F++G+CSCGDYW
Sbjct: 844 FKSGSCSCGDYW 855
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 163/418 (38%), Gaps = 104/418 (24%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
R +HG+++ +GL S + L+ Y CG DA +L + +V+ +M+N Y
Sbjct: 39 ARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYA 98
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G + +A E+F R+ +D W ++ D RP + C
Sbjct: 99 KQGSLSDAEELFDRMPRRDVASWNTLMS--------------------DTSRPAGSWMSC 138
Query: 122 VLSACSQLGALELGR-WIHSYMGKHRIDLNHIVGGALINMYSRCG--------------- 165
C +L LG W + G ++ AL++M+ RCG
Sbjct: 139 GALGCRELAPQLLGLFWKFDFWGDPDVET------ALVDMFVRCGYVDFASRLFSQIERP 192
Query: 166 ----------------DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
ID A++ FE+M ERDV ++N +IA L+ GR EA+ + EM
Sbjct: 193 TIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMH 252
Query: 210 NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHY--GCIVDLLSRVG 267
+G+R T+ L AC+ + G ++ + R PQI+ Y +++L ++ G
Sbjct: 253 RKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSL---PQIDPYVASALIELYAKCG 309
Query: 268 RPEEAYDFITNMK----------------------------------IAPDHIMLGSLLS 293
+EA +++ +A D L +L+S
Sbjct: 310 SFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLIS 369
Query: 294 ACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNA----YASSGKWKEAVQIRAKMKE 347
C L LG Q+ C + +++SN+ YA G + A + + M E
Sbjct: 370 GCFNRMDLCLGRQLHSL---CLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSE 424
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 169/390 (43%), Gaps = 50/390 (12%)
Query: 3 REIHGQVL----KLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMIN 58
RE+ Q+L K + LV+++ +CG A +LF ++ E + M+
Sbjct: 144 RELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQI-ERPTIFCRNSMLA 202
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVT 118
Y + +++A E F + +D V W MI L ++G + AL L EM R VR + T
Sbjct: 203 GYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTT 262
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
L+AC++L +L G+ +H+ + + ++ V ALI +Y++CG +A +VF ++
Sbjct: 263 YTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQ 322
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH--------- 229
+R+ ++ LI G + ++VE+F +M + + + +++ C +
Sbjct: 323 DRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQ 382
Query: 230 ---------------------------GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDL 262
G L + F +F SM+ E I + ++
Sbjct: 383 LHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEF-VFSSMS-----ERDIVSWTSMITA 436
Query: 263 LSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR--SADSG 320
S++G +A +F M + I ++L A HG + G ++ +L + + D
Sbjct: 437 YSQIGNIIKAREFFDGMA-TRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWV 495
Query: 321 TYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
TYV L A G K QI +AG+
Sbjct: 496 TYVTLFRGCADIGANKLGDQIIGHTVKAGL 525
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 134/307 (43%), Gaps = 31/307 (10%)
Query: 114 PNEVT--IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
P+ VT + L +C GAL R +H + + + L++ Y CG + A
Sbjct: 16 PHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDAR 75
Query: 172 QVFE-EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTF------VGVL 224
++ ++KE +V T+N ++ G A G +A E+F M + + G
Sbjct: 76 RLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSW 135
Query: 225 NACSHGGLVDLGFEIFQSMTR-DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAP 283
+C G +L ++ + D+ +P +E +VD+ R G + A + ++ P
Sbjct: 136 MSCGALGCRELAPQLLGLFWKFDFWGDPDVE--TALVDMFVRCGYVDFASRLFSQIE-RP 192
Query: 284 DHIMLGSLLSA-CKIHG---KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAV 339
S+L+ K++G ++ E +A+R D ++ ++ A + SG+ +EA+
Sbjct: 193 TIFCRNSMLAGYAKLYGIDHAIEYFEDMAER-------DVVSWNMMIAALSQSGRVREAL 245
Query: 340 QIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSP 399
+ +M GV+ + + + F LG +Q++ K+ ++ + +++ Y
Sbjct: 246 GLVVEMHRKGVRLDSTTYTSSLTACARLFSLG-----WGKQLHAKV--IRSLPQIDPYVA 298
Query: 400 STEVVLH 406
S + L+
Sbjct: 299 SALIELY 305
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/433 (40%), Positives = 266/433 (61%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+I+ Y + + +A VF D + T+MI L + A+ LF EM R + P+
Sbjct: 352 LIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPD 411
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
+ +L+AC+ L A E G+ +H+++ K + + G AL+ Y++CG I+ A F
Sbjct: 412 PFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFS 471
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
+ ER V +++++I GLA HG A+E+F M+++GI P +T VL AC+H GLVD
Sbjct: 472 SLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDE 531
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
F SM +GI+ EHY C++DLL R G+ ++A + + +M + + G+LL A
Sbjct: 532 AKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGAS 591
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
++H +LG+ A++L SGT+VLL+N YASSG W E ++R MK++ ++KEP
Sbjct: 592 RVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPA 651
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
S +EV +++H FI+GD HP ++IY K+ EL ++ GY P+ +V LHD++ EKE
Sbjct: 652 MSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKEL 711
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
L+ HSERLA+ + L+ST P IRV KNLR+C DCH K I+NI R+II+RD NRFH
Sbjct: 712 LLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFH 771
Query: 476 HFENGTCSCGDYW 488
HF +GTCSCGDYW
Sbjct: 772 HFRDGTCSCGDYW 784
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 155/338 (45%), Gaps = 38/338 (11%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV + +++ YV+ G V+ A +F ++ D V W A+I G V NG RA++L +M+
Sbjct: 143 DVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMK 202
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ PN + +L AC+ GA +LGR IH +M K D + +G L++MY++ +D
Sbjct: 203 SSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLD 262
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A++VF+ M RD+ +N+LI+G + GR EA +F + +G+ + T VL + +
Sbjct: 263 DAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTA 322
Query: 229 -----------HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVD---------------- 261
H +GF IF + + G+ C+ D
Sbjct: 323 SLEAASATRQVHALAEKIGF-IFDAHVVN-GLIDSYWKCSCLSDAIRVFEECSSGDIIAV 380
Query: 262 -----LLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
LS+ E A M + PD +L SLL+AC + G+Q+ L+
Sbjct: 381 TSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIK 440
Query: 314 CR-SADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
+ +D+ L YA G ++A + + E GV
Sbjct: 441 RQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGV 478
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 139/302 (46%), Gaps = 39/302 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++H + G S+ LV +YG G DA ++FDE
Sbjct: 26 GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEA----------------- 68
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G NA V W ++ V+N + A+ +F EM ++P E C
Sbjct: 69 --GSERNA------------VSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSC 114
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V++AC+ ++ GR +H+ + + + + AL++MY + G +D A +FE+M + D
Sbjct: 115 VVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSD 174
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++N+LI+G ++G A+E+ +M + G+ P +L AC+ G DLG +I
Sbjct: 175 VVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHG 234
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIH 298
M + G +VD+ ++ ++A +D++++ D I+ +L+S C
Sbjct: 235 FMIKANADSDDYIGVG-LVDMYAKNHFLDDAMKVFDWMSHR----DLILWNALISGCSHG 289
Query: 299 GK 300
G+
Sbjct: 290 GR 291
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 138/329 (41%), Gaps = 38/329 (11%)
Query: 8 QVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMINCYVEHG 64
Q+ GL N +++ G F Q+ M + N D +++ Y ++
Sbjct: 200 QMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNH 259
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
+++A +VF + +D + W A+I G G A +F ++++ + N T+ VL
Sbjct: 260 FLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLK 319
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLN-HIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
+ + L A R +H+ K + H+V G LI+ Y +C + A++VFEE D+
Sbjct: 320 STASLEAASATRQVHALAEKIGFIFDAHVVNG-LIDSYWKCSCLSDAIRVFEECSSGDII 378
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF--- 240
S+I L+ A+++F EM+ +G+ P +LNAC+ + G ++
Sbjct: 379 AVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHL 438
Query: 241 ---QSMTRDYGIEPQIEHY---GCIVDL---------------------LSRVGRPEEAY 273
Q M+ + + Y G I D L++ G + A
Sbjct: 439 IKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRAL 498
Query: 274 DFITNM---KIAPDHIMLGSLLSACKIHG 299
+ M I P+HI + S+L AC G
Sbjct: 499 ELFGRMVDEGINPNHITMTSVLCACNHAG 527
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 122/272 (44%), Gaps = 42/272 (15%)
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M+ + V NE + VL +LG +H+ + V AL+ MY G
Sbjct: 1 MRAEGVCCNEFALPVVLKCVPDA---QLGAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57
Query: 167 IDKALQVFEEM-KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
+D A +VF+E ER+ ++N L++ + + +A+++F EM+ GI+PT+ F V+N
Sbjct: 58 MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 117
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGR-----------PEE--- 271
AC+ +D G ++ +M G E + +VD+ ++GR P+
Sbjct: 118 ACTGSRNIDAGRQV-HAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVV 176
Query: 272 -----------------AYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
A + + MK + P+ ML S+L AC G LG QI +
Sbjct: 177 SWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFM 236
Query: 312 LDCRSADSGTY--VLLSNAYASSGKWKEAVQI 341
+ +ADS Y V L + YA + +A+++
Sbjct: 237 IKA-NADSDDYIGVGLVDMYAKNHFLDDAMKV 267
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 2/150 (1%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D A ++ Y + G +E+A FS + + V W+AMI GL ++G RAL+LF M
Sbjct: 445 SDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRM 504
Query: 108 QRDNVRPNEVTIVCVLSACSQLGAL-ELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
+ + PN +T+ VL AC+ G + E R+ +S ID +I++ R G
Sbjct: 505 VDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGK 564
Query: 167 IDKALQVFEEMK-ERDVTTYNSLIAGLAMH 195
+D A+++ M + + + + +L+ +H
Sbjct: 565 LDDAMELVNSMPFQANASVWGALLGASRVH 594
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/427 (42%), Positives = 271/427 (63%), Gaps = 35/427 (8%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG E+HGQ +K+GL S+ L+ +Y C + A ++FD P+ D+V+ T MI Y
Sbjct: 158 EGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQ-RDLVSWTTMIQGY 216
Query: 61 VEHGL--------------------VENAF--------------EVFSRVKVKDTVCWTA 86
V+ G V NA +VF + VK+ V W +
Sbjct: 217 VKMGFAREGVGLYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNS 276
Query: 87 MIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHR 146
MI GL + G+ +L +FR+MQR V+P++VT+V VL++C+ LG LELG+W+H+Y+ +++
Sbjct: 277 MISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQ 336
Query: 147 IDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
I + +G AL++MY++CG ID+A VF+ M +DV +Y ++I GLAMHG+ +A+++F
Sbjct: 337 IRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFS 396
Query: 207 EMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRV 266
EM GI P +VTFVGVL ACSH GLV+ G + F+ M+ Y + PQ+EHYGC+VDLL R
Sbjct: 397 EMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRA 456
Query: 267 GRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLS 326
G EA +FI NM I PD +LG+LL ACKIHGK++LGE + K++ G YVL+S
Sbjct: 457 GLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMS 516
Query: 327 NAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQ 386
N Y+S+ +W++A+++R MKE ++K PGCSSIE++ IHEF GD HP+ ++IYK +
Sbjct: 517 NIYSSANRWRDALKLRKTMKERNLEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLD 576
Query: 387 ELKQIVK 393
E+ +K
Sbjct: 577 EIMSHLK 583
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 132/292 (45%), Gaps = 21/292 (7%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGL-VRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACS 127
A + ++++ + + A+I GL N + L ++++M + P+ TI VL AC+
Sbjct: 92 ALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACA 151
Query: 128 QLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNS 187
+ A+ G +H K + + V L+ MY+ C I A +VF+ +RD+ ++ +
Sbjct: 152 ESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTT 211
Query: 188 LIAGLAMHGRSIEAVEMFREMINQGIRPTKV---TFVG--VLNACSHGGLVDLGFEIFQS 242
+I G G + E V ++ IR + V FVG +++ G + ++FQ
Sbjct: 212 MIQGYVKMGFAREGVGLYI------IRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQE 265
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHG 299
M + + ++ L++ G+ +E+ M+ + PD + L ++L++C G
Sbjct: 266 MPVK-----NVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLG 320
Query: 300 KLQLGEQIAKRL-LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
L+LG+ + L + AD L + YA G +A + M V
Sbjct: 321 VLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDV 372
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/497 (39%), Positives = 284/497 (57%), Gaps = 40/497 (8%)
Query: 2 GREIHGQVLK--LGLRSN-----RSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVAST 54
G+EIH +K + LR N +L+++Y KC + A +FD +
Sbjct: 384 GKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSP-------- 435
Query: 55 VMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN--V 112
K +D V WT MI G ++G+ +AL+L EM ++
Sbjct: 436 ----------------------KERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQT 473
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRID-LNHIVGGALINMYSRCGDIDKAL 171
RPN TI C L AC+ L AL +G+ IH+Y +++ + + V LI+MY++CGDI A
Sbjct: 474 RPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDAR 533
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
VF+ M E++ T+ SL+ G MHG EA+ +F EM G + VT + VL ACSH G
Sbjct: 534 LVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSG 593
Query: 232 LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSL 291
++D G E F M D+G+ P EHY C+VDLL R GR A I M + P ++ +L
Sbjct: 594 MIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAL 653
Query: 292 LSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
LS C+IHGK++LGE AK++ + S + G+Y LLSN YA++G+WK+ +IR+ M+ G++
Sbjct: 654 LSCCRIHGKVELGEYAAKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIK 713
Query: 352 KEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDW 411
K PGCS +E F +GD HP ++IY+ + + Q +K GY P T LHD++D
Sbjct: 714 KRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLSDHMQRIKDIGYVPETGFALHDVDDE 773
Query: 412 EKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDR 471
EK+ L HSE+LA+ YG+++T IR+ KNLRVC DCH+ ++ I +II+RD
Sbjct: 774 EKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHEIILRDS 833
Query: 472 NRFHHFENGTCSCGDYW 488
+RFHHF+NG CSC YW
Sbjct: 834 SRFHHFKNGLCSCKGYW 850
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 184/373 (49%), Gaps = 25/373 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G++ HG + + N LV++Y K G +A +F MP DVV+ M+ Y
Sbjct: 248 GKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMP-VKDVVSWNAMVAGYS 306
Query: 62 EHGLVENAFEVFSRV---KVK-DTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ G E+A +F ++ K+K D V W+A I G + G AL + R+M ++PNEV
Sbjct: 307 QIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEV 366
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDL-------NHIVGGALINMYSRCGDIDKA 170
T++ VLS C+ +GAL G+ IH Y K+ +DL ++V LI+MY++C +D A
Sbjct: 367 TLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIA 426
Query: 171 LQVFEEM--KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG--IRPTKVTFVGVLNA 226
+F+ + KERDV T+ +I G + HG + +A+E+ EM + RP T L A
Sbjct: 427 RAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVA 486
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
C+ + +G +I R+ + C++D+ ++ G +A NM + + +
Sbjct: 487 CASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNM-MEKNEV 545
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCR----SADSGTYVLLSNAYASSGKWKEAVQIR 342
SL++ +HG GE+ + R D T +++ A + SG + ++
Sbjct: 546 TWTSLMTGYGMHG---YGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYF 602
Query: 343 AKMK-EAGVQKEP 354
+MK + GV P
Sbjct: 603 NRMKTDFGVSPGP 615
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 156/341 (45%), Gaps = 30/341 (8%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVC--WTAMIDGLVRNGEMARALDLFREMQRDNVR 113
+I+ Y+ G + +A + R D W ++I NG + L F M +
Sbjct: 65 LISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWT 124
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
P+ T V AC ++ ++ G H+ N VG AL+ MYSRCG + A +V
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKV 184
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ-GIRPTKVTFVGVLNACSHGGL 232
F+EM DV ++NS+I A G+ A+EMF +M N+ G RP +T V VL C+ G
Sbjct: 185 FDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGT 244
Query: 233 VDL-----GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
L GF + M ++ + C+VD+ ++ G +EA +NM + D +
Sbjct: 245 RSLGKQFHGFAVTSEMIQNMFVG------NCLVDMYAKFGMMDEANTVFSNMPVK-DVVS 297
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
++++ G+ + ++ +++ + + D T+ + YA G EA+ + +M
Sbjct: 298 WNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML 357
Query: 347 EAGVQKE--------PGCSSIEV---NNEIHEFILGDIRHP 376
+G++ GC+S+ EIH + I++P
Sbjct: 358 SSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA---IKYP 395
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 164/370 (44%), Gaps = 71/370 (19%)
Query: 30 KCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMID 89
+CG+ A+ ++V ++ Y G + +A +VF + V D V W ++I+
Sbjct: 144 RCGDSSHALSRVTGF--MSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIE 201
Query: 90 GLVRNGEMARALDLFREMQRD-NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRID 148
+ G+ AL++F +M + RP+++T+V VL C+ +G LG+ H + +
Sbjct: 202 SYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMI 261
Query: 149 LNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMF--- 205
N VG L++MY++ G +D+A VF M +DV ++N+++AG + GR +AV +F
Sbjct: 262 QNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQM 321
Query: 206 --------------------------------REMINQGIRPTKVTFVGVLNACSHGGLV 233
R+M++ GI+P +VT + VL+ C+ G +
Sbjct: 322 QEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGAL 381
Query: 234 DLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLS 293
G EI Y I+ ++ L + G +E NM I L + +
Sbjct: 382 MHGKEI-----HCYAIKYPMD--------LRKNGHGDE------NMVIN----QLIDMYA 418
Query: 294 ACKIHGKLQLGEQIAKRLLDCRSA---DSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
CK IA+ + D S D T+ ++ Y+ G +A+++ ++M E
Sbjct: 419 KCK-------KVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDC 471
Query: 351 QKEPGCSSIE 360
Q P +I
Sbjct: 472 QTRPNAFTIS 481
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/492 (38%), Positives = 290/492 (58%), Gaps = 4/492 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMI 57
E E + ++ G+R N T ++ G+ + + D++ +V T ++
Sbjct: 305 EAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALV 364
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP-NE 116
+ Y +G ++ A +F +++ +D WT +I G + G L+L+REM+ P +
Sbjct: 365 DLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATK 424
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
+ CV+SAC+ LGA R HS + + + ++ +L+NMYSR G+++ A QVF++
Sbjct: 425 IIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDK 484
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
M RD + +LIAG A HG A+ +++EM +G P+++TF+ VL ACSH GL + G
Sbjct: 485 MSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQG 544
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
++F S+ DY + P I HY CI+DLLSR GR +A + I M + P+ + SLL A +
Sbjct: 545 KQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASR 604
Query: 297 IHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGC 356
IH ++ A ++ D +YVLLSN +A +G +R M GV+K G
Sbjct: 605 IHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGS 664
Query: 357 SSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWA 416
S IEV ++IHEF +GD HP+ ++I+ ++Q L +K GY P +E VLHD+ + EKE
Sbjct: 665 SWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKELL 724
Query: 417 LAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHH 476
L +HSE+LAI +GLI+T P TT+R+ LR+C+DCHS +K I+ I +R+IIVRD +RFH
Sbjct: 725 LRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHK 784
Query: 477 FENGTCSCGDYW 488
F +G CSCGDYW
Sbjct: 785 FRDGQCSCGDYW 796
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 126/234 (53%), Gaps = 8/234 (3%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC-WTAMIDGLVRNGEMARALDLFREM 107
DV+ ++ Y + G +E+A +F R+ + +V W AMI ++G A+ L+ +M
Sbjct: 156 DVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDM 215
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+V P+ T VLSACS LG L+ GR IH+ + +L+ + AL+ MY+RC +
Sbjct: 216 ---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCL 272
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
D A ++F+ + RDV +++++IA A EA+E + +M +G+RP TF VL AC
Sbjct: 273 DDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLAC 332
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITN 278
+ G + G + + + G + + + +VDL + G +EA +D I N
Sbjct: 333 ASVGDLRAGRAVHDQILGN-GYKITLVNGTALVDLYTSYGSLDEARSLFDQIEN 385
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 190/419 (45%), Gaps = 72/419 (17%)
Query: 30 KCGEFKDAMQLFDEM--PECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAM 87
+C + + Q+ D + +V ++ Y + G V +A F + K+ W +M
Sbjct: 36 QCQDLESVRQIHDRISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSM 95
Query: 88 IDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM-GKHR 146
+ +NG ALDL++ M +++PN V VL AC+ + ALE G+ IHS + G
Sbjct: 96 LTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKG 152
Query: 147 IDLNHIVGGALINMYSRCGDIDKALQVFEEMK-ERDVTTYNSLIAGLAMHGRSIEAVEMF 205
+ L+ I+ +L+ MY++CG ++ A ++FE M R V+++N++IA A G EA+ ++
Sbjct: 153 LKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLY 212
Query: 206 REMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSR 265
+M + P+ TF VL+ACS+ GL+D G +I ++ G E + ++ + +R
Sbjct: 213 EDM---DVEPSVRTFTSVLSACSNLGLLDQGRKI-HALISSRGTELDLSLQNALLTMYAR 268
Query: 266 -------------------------------VGRPEEAYDFITNMK---IAPDHIMLGSL 291
+EA +F + M+ + P++ S+
Sbjct: 269 CKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASV 328
Query: 292 LSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNA------YASSGKWKEAVQIRAKM 345
L AC G L+ G + ++L +G + L N Y S G EA + ++
Sbjct: 329 LLACASVGDLRAGRAVHDQIL-----GNGYKITLVNGTALVDLYTSYGSLDEARSLFDQI 383
Query: 346 KEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVV 404
+ ++ G ++ I G + R + + +E+K K+ P+T+++
Sbjct: 384 E----NRDEGLWTV--------LIGGYSKQGHRTGVLELYREMKNTTKV----PATKII 426
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 150/332 (45%), Gaps = 40/332 (12%)
Query: 11 KLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEM-------------PECN--------- 48
++ R + S+ ++ Y + G F++A++L+++M C+
Sbjct: 182 RMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVEPSVRTFTSVLSACSNLGLLDQGR 241
Query: 49 -------------DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNG 95
D+ ++ Y +++A ++F R+ +D V W+AMI
Sbjct: 242 KIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETD 301
Query: 96 EMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGG 155
A++ + +MQ + VRPN T VL AC+ +G L GR +H + + + + G
Sbjct: 302 LFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGT 361
Query: 156 ALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRP 215
AL+++Y+ G +D+A +F++++ RD + LI G + G +E++REM N P
Sbjct: 362 ALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVP 421
Query: 216 -TKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYD 274
TK+ + V++AC+ G + + D G+ +V++ SR G E A
Sbjct: 422 ATKIIYSCVISACASLGAFADARQAHSDIEAD-GMISDFVLATSLVNMYSRWGNLESARQ 480
Query: 275 FITNMKIAPDHIMLGSLLSACKIHGK--LQLG 304
M + D + +L++ HG+ L LG
Sbjct: 481 VFDKMS-SRDTLAWTTLIAGYAKHGEHGLALG 511
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/487 (37%), Positives = 288/487 (59%), Gaps = 29/487 (5%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++HG+VL L + R L+++Y KCG + A +FD
Sbjct: 263 GRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDH------------------ 304
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+S + W+ M+ G V+NG ALDLFR M R+ V + T+
Sbjct: 305 -----------WSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTS 353
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V +AC+ +G +E GR +H + K L+ + A+++MY++CG+++ A +F+ ++
Sbjct: 354 VAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKN 413
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ + S++ A HG+ A+E+F M + + P ++T VGVL+ACSH GLV G F+
Sbjct: 414 IAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFK 473
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M +YGI P IEHY CIVDL R G ++A +FI I + I+ +LLSAC++H
Sbjct: 474 QMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACRLHQHN 533
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+ + +++L+ D+G+YV+LSN YA++ KW + ++R M+E V+K+PG S I +
Sbjct: 534 EYAKLASEKLVQLEQCDAGSYVMLSNIYATNNKWHDTFELRVSMQERKVRKQPGRSWIHL 593
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N +H F+ GD HPQ +IY +++L + +K GY+ T++V+HD+ED ++E AL HS
Sbjct: 594 KNTVHTFVAGDASHPQSAEIYAYLEKLVERLKEIGYTSRTDLVVHDVEDEQRETALKFHS 653
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +G+IST T +R+ KNLRVC DCH IK I+ T R+I+VRD RFHHF++ +
Sbjct: 654 EKLAIAFGIISTPSGTPLRIFKNLRVCEDCHEAIKYISLATGREIVVRDLYRFHHFKDAS 713
Query: 482 CSCGDYW 488
CSC D+W
Sbjct: 714 CSCEDFW 720
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 203/459 (44%), Gaps = 67/459 (14%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +HG +L+ G+ + ++++Y KCG+F+ A ++F M E D V+ + I +
Sbjct: 131 GKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAE-RDAVSWNIAIGACI 189
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G + + ++F ++DT W +I GL+R+G A AL R M + V N T
Sbjct: 190 QSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYST 249
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE-- 179
L +LGR +H + ++ + V +L++MY +CG ++ A VF+
Sbjct: 250 AFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLT 309
Query: 180 RDVT-TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
RD+ +++++AG +GR EA+++FR M+ +G+ + T V AC++ G+V+ G +
Sbjct: 310 RDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQ 369
Query: 239 IFQSMTRD-YGIEPQIEHYGCIVDLLSRVGRPEEA------------------------- 272
+ + + Y ++ + IVD+ ++ G E+A
Sbjct: 370 VHGCVEKLWYKLDAPLA--SAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASH 427
Query: 273 ---------YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT-- 321
++ +T K+ P+ I L +LSAC G + GE K++ +
Sbjct: 428 GQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEH 487
Query: 322 YVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFI-----LGDIRHP 376
Y + + Y SG +A IE NN HE I L R
Sbjct: 488 YNCIVDLYGRSGLLDKAKNF-----------------IEENNINHEAIVWKTLLSACRLH 530
Query: 377 QREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
Q + K E ++V+LE + V+L +I +W
Sbjct: 531 QHNEYAKLASE--KLVQLEQCDAGSYVMLSNIYATNNKW 567
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 136/379 (35%), Gaps = 110/379 (29%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR G L+ L + R ++ + + F DA +FDE P
Sbjct: 29 GRAARGGSLEARLATVPHERASVLRFWVRRRRFHDARGVFDERP---------------- 72
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN-VRPNEVTIV 120
+ WT I G R G A + F EM + PN +
Sbjct: 73 ----------------TRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLA 116
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA---------- 170
V+ C+ +G +E G+ +H +M ++ + L+ ++ A+++MY++CG ++A
Sbjct: 117 AVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAER 176
Query: 171 ---------------------LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
+Q+F+E RD T++N++I+GL G + +A+ R M
Sbjct: 177 DAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMA 236
Query: 210 NQGIRPTKVTFVGVLNACSHGGLVDLG--------------------------------- 236
G+ T+ L DLG
Sbjct: 237 QAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLE 296
Query: 237 -----FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIML 288
F+ + +TRD + +V + GR EEA D M +A D L
Sbjct: 297 AAASVFDHWSPLTRDMNFA-----WSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTL 351
Query: 289 GSLLSACKIHGKLQLGEQI 307
S+ +AC G ++ G Q+
Sbjct: 352 TSVAAACANVGMVEQGRQV 370
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 34/197 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR++HG V KL + + +V++Y KCG +DA +FD N + T M+ Y
Sbjct: 366 QGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKN-IAVWTSMLCSY 424
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG G + A++LF M + + PNE+T+V
Sbjct: 425 ASHG-----------------------------QGRI--AIELFERMTAEKMTPNEITLV 453
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG-GALINMYSRCGDIDKALQVFEEMK- 178
VLSACS +G + G M + + I ++++Y R G +DKA EE
Sbjct: 454 GVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNI 513
Query: 179 ERDVTTYNSLIAGLAMH 195
+ + +L++ +H
Sbjct: 514 NHEAIVWKTLLSACRLH 530
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 86/200 (43%), Gaps = 12/200 (6%)
Query: 155 GALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-I 213
+++ + R A VF+E R + I+G A GR + + F EM+ +G
Sbjct: 49 ASVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEA 108
Query: 214 RPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA- 272
P V+ C+ G V+ G + M R+ G+ + ++D+ ++ G+ E A
Sbjct: 109 TPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRN-GVHLDVVLCNAVLDMYAKCGQFERAR 167
Query: 273 --YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYA 330
+ + +I +G+ + + I G +QL ++ R D+ ++ + +
Sbjct: 168 RVFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLR-------DTTSWNTIISGLM 220
Query: 331 SSGKWKEAVQIRAKMKEAGV 350
SG +A+ +M +AGV
Sbjct: 221 RSGHAADALSHLRRMAQAGV 240
>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/489 (40%), Positives = 298/489 (60%), Gaps = 20/489 (4%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++HG VLK G + R LVE+Y KCG +A + ++P ++
Sbjct: 541 GRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLD------------FL 588
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++G NA +K V W M+ G V NG+ L FR M R+ V + T+
Sbjct: 589 KNG---NAGVTCKELKA-GIVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTT 644
Query: 122 VLSACSQLGALELGRWIHSYMGK--HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
++SAC+ G LE GR +H+Y K HRID VG +LI+MYS+ G +D A +F + E
Sbjct: 645 IISACANAGILEFGRHVHAYNHKIGHRID--AYVGSSLIDMYSKSGSLDDAWTIFRQTNE 702
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
++ + S+I+G A+HG+ +A+ +F EM+NQGI P +VTF+GVLNAC H GL++ G
Sbjct: 703 PNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGVLNACCHAGLLEEGCRY 762
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F+ M Y I P +EH +VDL R G E +FI I+ + S LS+C++H
Sbjct: 763 FRMMKDAYCINPGVEHCTSMVDLYGRAGHLTETKNFIFENGISHLTSVWKSFLSSCRLHK 822
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+++G+ +++ LL +D G YVLLSN AS+ +W EA ++R+ M + G++K+PG S I
Sbjct: 823 NVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGIKKQPGQSWI 882
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
++ ++IH FI+GD HPQ E+IY + L +K GYS ++V+ D+E+ + E ++
Sbjct: 883 QLKDQIHTFIMGDRSHPQDEEIYSYLDILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISH 942
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LA+ +G+I+T T IR++KNLR+C DCH+ IK + + R+II+RD +RFHHF++
Sbjct: 943 HSEKLAVVFGIINTANRTPIRIIKNLRICTDCHNFIKYASQLLDREIILRDIHRFHHFKH 1002
Query: 480 GTCSCGDYW 488
G CSCGDYW
Sbjct: 1003 GGCSCGDYW 1011
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 181/366 (49%), Gaps = 24/366 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H +L+ G+ ++ +++LY KC F+ A ++F+ M E DVV+ +MI+ Y+
Sbjct: 409 GKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMNE-GDVVSWNIMISAYL 467
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G VE + ++F R+ KD V W ++DGL++ G +AL+ M + VT
Sbjct: 468 RAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSI 527
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK--- 178
L S L +ELGR +H + K + + +L+ MY +CG +D A V +++
Sbjct: 528 ALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDF 587
Query: 179 -------------ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
+ + ++ +++G +G+ + ++ FR M+ + + T +++
Sbjct: 588 LKNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIIS 647
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHY--GCIVDLLSRVGRPEEAYDFITNMKIAP 283
AC++ G+++ G + ++ I +I+ Y ++D+ S+ G ++A+ P
Sbjct: 648 ACANAGILEFGRHVH---AYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTN-EP 703
Query: 284 DHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNAYASSGKWKEAVQIR 342
+ + S++S C +HG+ + + + +L+ + T++ + NA +G +E +
Sbjct: 704 NIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGVLNACCHAGLLEEGCRYF 763
Query: 343 AKMKEA 348
MK+A
Sbjct: 764 RMMKDA 769
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 90/157 (57%)
Query: 52 ASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN 111
++ ++ YV+ +++A ++F + ++T WT +I G R G LFREM+
Sbjct: 326 SANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGSSEVVFKLFREMRAKG 385
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
PN+ T+ + CS L+LG+ +H++M ++ ID + ++G +++++Y +C + A
Sbjct: 386 ACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAE 445
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM 208
+VFE M E DV ++N +I+ G ++++MFR +
Sbjct: 446 RVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRL 482
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 75/157 (47%), Gaps = 4/157 (2%)
Query: 157 LINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPT 216
L+ +Y + ++D A ++F+E+ +R+ T+ LI+G + G S ++FREM +G P
Sbjct: 330 LLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGSSEVVFKLFREMRAKGACPN 389
Query: 217 KVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSR---VGRPEEAY 273
+ T + CS + LG + M R+ GI+ + I+DL + E +
Sbjct: 390 QYTLSSLFKCCSLDINLQLGKGVHAWMLRN-GIDADVVLGNSILDLYLKCKVFEYAERVF 448
Query: 274 DFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKR 310
+ + + +IM+ + L A + L + ++ +
Sbjct: 449 ELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYK 485
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/488 (37%), Positives = 296/488 (60%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+ +HG V+KLG+ L+ +YGK G F DA
Sbjct: 239 EGKSLHGVVVKLGMSGKAKVVNSLINMYGKLG-FLDA----------------------- 274
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
A ++F + V+ V W +M+ NG + +DLF M+R + P++ T+V
Sbjct: 275 --------ASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMV 326
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L AC+ G IH+Y+ + + + I+ AL+N+Y++ G ++ + +FEE+K+R
Sbjct: 327 ALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDR 386
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D + +++AG A+H EA+++F M+ +G+ VTF +L+ACSH GLV+ G + F
Sbjct: 387 DRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYF 446
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ M+ Y +EP+++HY C+VDLL R GR E+AY+ I +M + P + G+LL AC+++G
Sbjct: 447 EIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGN 506
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++LG+++A++LL +D Y++LSN Y+++G W++A ++RA MKE + + PGCS IE
Sbjct: 507 VELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIE 566
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
N+IH F++GD HP+ ++I+ K++EL + ++ G +P TE VLHDI++ K + H
Sbjct: 567 HGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKVDMINKH 626
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI +GL+ T + + KNLR+C DCHS K + + KR II+RD RFHHF +G
Sbjct: 627 SEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFADG 686
Query: 481 TCSCGDYW 488
CSC DYW
Sbjct: 687 LCSCRDYW 694
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 143/296 (48%), Gaps = 35/296 (11%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
IH +V+K S+ +LV +Y K G +DA +LFDEMP
Sbjct: 141 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPN------------------ 182
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR-PNEVTIVCVL 123
KD V W +++ GL G + L+ F M+ ++ R PNEVT++ V+
Sbjct: 183 --------------KDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVV 228
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
SAC+ +GAL+ G+ +H + K + V +LINMY + G +D A Q+FEEM R +
Sbjct: 229 SACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLV 288
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
++NS++ +G + + +++F M GI P + T V +L AC+ GL I +
Sbjct: 289 SWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYI 348
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
R G I +++L +++GR + D +K D I ++L+ +H
Sbjct: 349 HR-CGFNADIIIATALLNLYAKLGRLNASEDIFEEIK-DRDRIAWTAMLAGYAVHA 402
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 125/281 (44%), Gaps = 39/281 (13%)
Query: 103 LFREMQRDNVRPNEV-TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMY 161
+FRE + V + V ++V +S+C+ + IH+ + K + +G L++MY
Sbjct: 108 IFREASQFIVVYSIVQSLVFAISSCTSVSYCSA---IHARVIKSLNYSDGFIGDRLVSMY 164
Query: 162 SRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMF-REMINQGIRPTKVTF 220
+ G + A ++F+EM +D+ ++NSL++GL+ G + F R G +P +VT
Sbjct: 165 FKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTL 224
Query: 221 VGVLNACS-----------HGGLVDLGF----EIFQSMTRDYGIEPQIE----------- 254
+ V++AC+ HG +V LG ++ S+ YG ++
Sbjct: 225 LSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPV 284
Query: 255 ----HYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQI 307
+ +V + + G E+ D MK I PD + +LL AC G + E I
Sbjct: 285 RSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESI 344
Query: 308 AKRLLDCR-SADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+ C +AD L N YA G+ + I ++K+
Sbjct: 345 HAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKD 385
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/492 (38%), Positives = 290/492 (58%), Gaps = 4/492 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMI 57
E E + ++ G+R N T ++ G+ + + D++ +V T ++
Sbjct: 304 EAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALV 363
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP-NE 116
+ Y +G ++ A +F +++ +D WT +I G + G L+L+REM+ P +
Sbjct: 364 DLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATK 423
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
+ CV+SAC+ LGA R HS + + + ++ +L+NMYSR G+++ A QVF++
Sbjct: 424 IIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDK 483
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
M RD + +LIAG A HG A+ +++EM +G P+++TF+ VL ACSH GL + G
Sbjct: 484 MSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQG 543
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
++F S+ DY + P I HY CI+DLLSR GR +A + I M + P+ + SLL A +
Sbjct: 544 KQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASR 603
Query: 297 IHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGC 356
IH ++ A ++ D +YVLLSN +A +G +R M GV+K G
Sbjct: 604 IHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGS 663
Query: 357 SSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWA 416
S IEV ++IHEF +GD HP+ ++I+ ++Q L +K GY P +E VLHD+ + EKE
Sbjct: 664 SWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKELL 723
Query: 417 LAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHH 476
L +HSE+LAI +GLI+T P TT+R+ LR+C+DCHS +K I+ I +R+IIVRD +RFH
Sbjct: 724 LRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHK 783
Query: 477 FENGTCSCGDYW 488
F +G CSCGDYW
Sbjct: 784 FRDGQCSCGDYW 795
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 190/418 (45%), Gaps = 71/418 (16%)
Query: 30 KCGEFKDAMQLFDEM--PECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAM 87
+C + + Q+ D + +V ++ Y + G V +A F + K+ W +M
Sbjct: 36 QCQDLESVRQIHDRISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSM 95
Query: 88 IDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM-GKHR 146
+ +NG ALDL++ M +++PN V VL AC+ + ALE G+ IHS + G
Sbjct: 96 LTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKG 152
Query: 147 IDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
+ L+ I+ +L+ MY++CG ++ A ++FE M R V+++N++IA A G EA+ ++
Sbjct: 153 LKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYE 212
Query: 207 EMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSR- 265
+M + P+ TF VL+ACS+ GL+D G +I ++ G E + ++ + +R
Sbjct: 213 DM---DVEPSVRTFTSVLSACSNLGLLDQGRKI-HALISSRGTELDLSLQNALLTMYARC 268
Query: 266 ------------------------------VGRPEEAYDFITNMK---IAPDHIMLGSLL 292
+EA +F + M+ + P++ S+L
Sbjct: 269 KCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVL 328
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNA------YASSGKWKEAVQIRAKMK 346
AC G L+ G + ++L +G + L N Y S G EA + +++
Sbjct: 329 LACASVGDLRAGRAVHDQIL-----GNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIE 383
Query: 347 EAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVV 404
++ G ++ I G + R + + +E+K K+ P+T+++
Sbjct: 384 ----NRDEGLWTV--------LIGGYSKQGHRTGVLELYREMKNTTKV----PATKII 425
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 144/319 (45%), Gaps = 40/319 (12%)
Query: 24 LVELYGKCGEFKDAMQLFDEM-------------PECN---------------------- 48
++ Y + G F++A++L+++M C+
Sbjct: 194 MIAAYAQSGHFEEAIRLYEDMDVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTEL 253
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D+ ++ Y +++A ++F R+ +D V W+AMI A++ + +MQ
Sbjct: 254 DLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQ 313
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ VRPN T VL AC+ +G L GR +H + + + + G AL+++Y+ G +D
Sbjct: 314 LEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLD 373
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRP-TKVTFVGVLNAC 227
+A +F++++ RD + LI G + G +E++REM N P TK+ + V++AC
Sbjct: 374 EARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISAC 433
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
+ G + + D G+ +V++ SR G E A M + D +
Sbjct: 434 ASLGAFADARQAHSDIEAD-GMISDFVLATSLVNMYSRWGNLESARQVFDKMS-SRDTLA 491
Query: 288 LGSLLSACKIHGK--LQLG 304
+L++ HG+ L LG
Sbjct: 492 WTTLIAGYAKHGEHGLALG 510
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/492 (38%), Positives = 293/492 (59%), Gaps = 21/492 (4%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H LK G L+ LY KCG+ ++A +F M E D+V+ T MI Y
Sbjct: 390 GRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSE-RDIVSWTSMITAYS 448
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPNEVTIV 120
+ G + A E F + ++ + W AM+ +++G L ++ M + +V P+ VT V
Sbjct: 449 QIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYV 508
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+ C+ +GA +LG I + K + LN V A I MYS+CG I +A ++F+ + +
Sbjct: 509 TLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGK 568
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++N++I G + HG +A + F +M+++G +P +++V VL+ CSH GLV G F
Sbjct: 569 DVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYF 628
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
MTR +GI P +EH+ C+VDLL R G EA D I M + P + G+LLSACKIHG
Sbjct: 629 DMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGN 688
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+L E AK + + S DSG+Y+LL+ Y+ +GK ++ Q+R M++ G++K PG S +E
Sbjct: 689 DELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWME 748
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGY----SPSTEVVLHDIEDWEKEWA 416
V N++H F D+ HPQ I KM EL + + GY SP +E+ H
Sbjct: 749 VENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYVRTESPRSEI--H---------- 796
Query: 417 LAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHH 476
HSE+LA+ +G++S + I ++KNLR+C DCH++IKLI+++T R+ ++RD RFHH
Sbjct: 797 ---HSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHH 853
Query: 477 FENGTCSCGDYW 488
F++G+CSCGDYW
Sbjct: 854 FKSGSCSCGDYW 865
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 172/418 (41%), Gaps = 78/418 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
R +HG+++ +GL S + L+ Y CG DA +L + +V+ +M+N Y
Sbjct: 23 ARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYA 82
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTIV 120
+ G + +A E+F R+ +D W ++ G + L+ F M R + PN T
Sbjct: 83 KQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFC 142
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG--------------- 165
CV+ +C LG EL + K + V AL++M+ RCG
Sbjct: 143 CVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERP 202
Query: 166 ----------------DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
ID A++ FE+M ERDV ++N +IA L+ GR EA+ + EM
Sbjct: 203 TIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMH 262
Query: 210 NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHY--GCIVDLLSRVG 267
+G+R T+ L AC+ + G ++ + R PQI+ Y +++L ++ G
Sbjct: 263 RKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSL---PQIDPYVASALIELYAKCG 319
Query: 268 RPEEAYDFITNMK----------------------------------IAPDHIMLGSLLS 293
+EA +++ +A D L +L+S
Sbjct: 320 SFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLIS 379
Query: 294 ACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNA----YASSGKWKEAVQIRAKMKE 347
C L LG Q+ C + +++SN+ YA G + A + + M E
Sbjct: 380 GCFNRMDLCLGRQLHSL---CLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSE 434
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 169/390 (43%), Gaps = 50/390 (12%)
Query: 3 REIHGQVL----KLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMIN 58
RE+ Q+L K + LV+++ +CG A +LF ++ E + M+
Sbjct: 154 RELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQI-ERPTIFCRNSMLA 212
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVT 118
Y + +++A E F + +D V W MI L ++G + AL L EM R VR + T
Sbjct: 213 GYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTT 272
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
L+AC++L +L G+ +H+ + + ++ V ALI +Y++CG +A +VF ++
Sbjct: 273 YTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQ 332
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH--------- 229
+R+ ++ LI G + ++VE+F +M + + + +++ C +
Sbjct: 333 DRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQ 392
Query: 230 ---------------------------GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDL 262
G L + F +F SM+ E I + ++
Sbjct: 393 LHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEF-VFSSMS-----ERDIVSWTSMITA 446
Query: 263 LSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR--SADSG 320
S++G +A +F M + I ++L A HG + G ++ +L + + D
Sbjct: 447 YSQIGNIIKAREFFDGMA-TRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWV 505
Query: 321 TYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
TYV L A G K QI +AG+
Sbjct: 506 TYVTLFRGCADIGANKLGDQIIGHTVKAGL 535
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 124/263 (47%), Gaps = 23/263 (8%)
Query: 150 NHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
N I ++N Y++ G + A ++F+ M RDV ++N+L++G R ++ +E F M
Sbjct: 70 NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129
Query: 210 NQGIR-PTKVTFVGVLNACSHGGLVDLGFEIFQSMTR-DYGIEPQIEHYGCIVDLLSRVG 267
G P TF V+ +C G +L ++ + D+ +P +E +VD+ R G
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVE--TALVDMFVRCG 187
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSA-CKIHG---KLQLGEQIAKRLLDCRSADSGTYV 323
+ A + ++ P S+L+ K++G ++ E +A+R D ++
Sbjct: 188 YVDFASRLFSQIE-RPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAER-------DVVSWN 239
Query: 324 LLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYK 383
++ A + SG+ +EA+ + +M GV+ + + + F LG +Q++
Sbjct: 240 MMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLG-----WGKQLHA 294
Query: 384 KMQELKQIVKLEGYSPSTEVVLH 406
K+ ++ + +++ Y S + L+
Sbjct: 295 KV--IRSLPQIDPYVASALIELY 315
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/494 (39%), Positives = 300/494 (60%), Gaps = 7/494 (1%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMI 57
E E+ ++++ G NR T + L+ K + Q+ + + N D ++
Sbjct: 289 EAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALL 348
Query: 58 NCYVEHGLVENAFEVFSRV-KVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
CY + G +EN E+FSR+ + +D V W +MI G + N + +A+DL M + R +
Sbjct: 349 ACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDC 408
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
T VLSAC+ + LE G +H+ + ++ + ++G AL++MYS+CG ID A + F
Sbjct: 409 FTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNL 468
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
M R++ ++NS+I+G A HG A+ +F M G P +TFVGVL+ACSH GLVD G
Sbjct: 469 MPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEG 528
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA-C 295
FE F+SMT YG+ P++EHY C+VDLL R G ++ +FI M I P+ ++ ++L A C
Sbjct: 529 FEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACC 588
Query: 296 KIHG-KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
+ +G K +LG + A+ L + ++ YVLLSN YAS GKW++ + R M+EA V+KE
Sbjct: 589 RGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEA 648
Query: 355 GCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKE 414
GCS + + + +H F+ GD HP++ IY K++EL + ++ GY P + L+D+E KE
Sbjct: 649 GCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKELDKKIRDAGYVPQIKFALYDLEPENKE 708
Query: 415 WALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRF 474
L+ HSE+LA+ + +++ IR++KNLRVC DCHS K I+ + R I++RD NRF
Sbjct: 709 ELLSYHSEKLAVAF-VLTRNSGLPIRIMKNLRVCGDCHSAFKYISKVVDRSIVLRDSNRF 767
Query: 475 HHFENGTCSCGDYW 488
HHFE+G CSC DYW
Sbjct: 768 HHFEDGKCSCRDYW 781
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 154/352 (43%), Gaps = 43/352 (12%)
Query: 1 EGREIHGQVLKLGLRSNR-STRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINC 59
+GR++HG ++ GL + + L+ +Y KCG+
Sbjct: 120 KGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGD-------------------------- 153
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
+++A VF + KD+V W +MI GL +N A+ + M++ + P+ +
Sbjct: 154 ------IDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFAL 207
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+ LS+C+ LG + LG+ H K +D++ V L+ +Y+ + + +VF M E
Sbjct: 208 ISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLE 267
Query: 180 RDVTTYNSLIAGLAMHGRSI-EAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
RD ++N++I LA G S+ EA+E+F EM+ G P +VTF+ +L S L +
Sbjct: 268 RDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQ 327
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA---- 294
I ++ Y ++ ++ + G E + + M D + S++S
Sbjct: 328 I-HALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHN 386
Query: 295 ---CKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRA 343
CK + L Q +R LDC + + + A G A IRA
Sbjct: 387 ELLCKAMDLVWLMMQRGQR-LDCFTFATVLSACATVATLECGMEVHACAIRA 437
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 149/348 (42%), Gaps = 69/348 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G++ HG+ +KLGL + S L+ LY + + ++F M E
Sbjct: 223 GQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLE--------------- 267
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNG-EMARALDLFREMQRDNVRPNEVTIV 120
+D V W +I L +G ++ A+++F EM R PN VT +
Sbjct: 268 -----------------RDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFI 310
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE- 179
+L+ S L +L IH+ + K+ + ++ + AL+ Y + G+++ ++F M E
Sbjct: 311 NLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSER 370
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
RD ++NS+I+G + +A+++ M+ +G R TF VL+AC+ ++ G E+
Sbjct: 371 RDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEV 430
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDF------------------------ 275
R +E + +VD+ S+ GR + A F
Sbjct: 431 HACAIRAC-LESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGH 489
Query: 276 -------ITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
T MK++ PDHI +LSAC G + G + K + +
Sbjct: 490 GDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTE 537
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 96/191 (50%), Gaps = 2/191 (1%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D+ +IN YV G +A ++F + ++ V W +I G +NG A + +EM
Sbjct: 33 SDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVLKEM 92
Query: 108 QRDNVRPNEVTIVCVLSACSQ-LGALELGRWIHSYMGKHRI-DLNHIVGGALINMYSRCG 165
+ PN + AC + + GR +H Y + + D VG LINMY++CG
Sbjct: 93 IFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCG 152
Query: 166 DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
DID A VF M ++D ++NS+I GL + +AV+ + M G+ P+ + L+
Sbjct: 153 DIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALS 212
Query: 226 ACSHGGLVDLG 236
+C+ G + LG
Sbjct: 213 SCASLGCILLG 223
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 108/249 (43%), Gaps = 42/249 (16%)
Query: 138 IHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGR 197
H + KH D + + LIN+Y R GD A ++F+EM +R+ T+ LI+G +G
Sbjct: 22 FHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGM 81
Query: 198 SIEAVEMFREMINQGIRPTKVTFVGVLNACS------------HG-----GLVDLGFEIF 240
+A + +EMI +G P + F + AC HG GL D +
Sbjct: 82 PEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVG 141
Query: 241 QSMTRDYGIEPQIEH----YGCIVD--------LLSRVGRPE------EAYDFITNMKIA 282
+ Y I+H +G +VD +++ + + + ++Y+ + +
Sbjct: 142 NGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLM 201
Query: 283 PDHIMLGSLLSACKIHGKLQLGEQI----AKRLLDCRSADSGTYVLLSNAYASSGKWKEA 338
P + L S LS+C G + LG+Q K LD + S T + L YA + + E
Sbjct: 202 PSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLAL---YAETSRLAEC 258
Query: 339 VQIRAKMKE 347
++ + M E
Sbjct: 259 QKVFSWMLE 267
>gi|413955987|gb|AFW88636.1| hypothetical protein ZEAMMB73_169634 [Zea mays]
Length = 555
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/486 (39%), Positives = 299/486 (61%), Gaps = 4/486 (0%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN-DVVASTVMINCYVE 62
EIH + K+GL S + L +LY G +A +L M E N D +M+ +++
Sbjct: 73 EIHCHLTKVGLLSKQHITPPLFKLYISHGYMLEACELLWSMLEWNTDPFHGNLMLMGFLK 132
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
G ++ A+++F R+ VKD + W +MI G VR+ + A+++F + + P+ + V
Sbjct: 133 SGRLDKAYQIFKRMPVKDLISWNSMIAGAVRSSHLKEAMNIFSRLVSSGLVPDCFSFSSV 192
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
LSAC++ GA G W+H M + +++NHI+ AL++MY++CG ID A ++F ++K +
Sbjct: 193 LSACARAGARRYGVWVHHLMTELGVEMNHILSSALVDMYAKCGRIDVATEIFNKVKGNHI 252
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
+ +N++I+GLA HG + V +F +M ++ + P VTFV +L ACS G+V+ F+S
Sbjct: 253 SVWNTMISGLASHGLGSDVVILFHKMKSEELVPDGVTFVALLTACSRCGMVEEARHYFRS 312
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
MT +Y I P++EHYG +VD LSR G +EAY+ + +M + PD ++ +LLSAC+ + +
Sbjct: 313 MTTEYSITPEVEHYGALVDTLSRAGLLDEAYELVMSMNVKPDVVIWRALLSACRRYRHTK 372
Query: 303 LGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVN 362
LGE + + C SG Y LLSN Y+S+ +W ++ ++ + K+ V+K G S +E+
Sbjct: 373 LGEATIEH-MACHG--SGDYTLLSNIYSSANRWNDSEEVWKQRKQKKVRKTKGLSWVELG 429
Query: 363 NEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSE 422
HEF GD HP E IY + L + K+EGY+P TE+V D+ + E+E L HSE
Sbjct: 430 GSTHEFKAGDRSHPDTEDIYVVLHGLCRRAKVEGYAPLTELVTKDVSEEEREENLTFHSE 489
Query: 423 RLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTC 482
+LA+ Y ++ T P T I V KNL+VC+DCH +K+I+ + R II+RDR RFH FE+G C
Sbjct: 490 KLAVAYSVLKTGPGTEIMVSKNLQVCSDCHEWMKIISKVLCRVIILRDRVRFHRFESGWC 549
Query: 483 SCGDYW 488
SC DYW
Sbjct: 550 SCKDYW 555
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/488 (39%), Positives = 286/488 (58%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+EIH +++ G N LV++Y KC
Sbjct: 288 EGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRS--------------------------- 320
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V A VF R+ K+ V WTAM+ G +NG A+ +F +MQR+ + P++ T+
Sbjct: 321 -----VRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLG 375
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+S+C+ L +LE G H + V ALI +Y +CG I+ + Q+F+EM R
Sbjct: 376 SVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFR 435
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++ +L++G A G++ E +++F M+ QG++P VTF+ VL+ACS GLV+ G + F
Sbjct: 436 DEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYF 495
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+SM +D+GI P +HY C++DL R GR EEA +FI M +PD I +LLS+C+++G
Sbjct: 496 ESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGN 555
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++G+ A+ LL+ + Y+LLS+ YA+ GKW Q+R M+E G +KEPG S I+
Sbjct: 556 EEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWIK 615
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
++++ F D P +QIY ++++L + EGY P VLHD+ED EK L H
Sbjct: 616 YKSKVYIFSADDQSSPFSDQIYAELEKLNHKMIEEGYVPDASSVLHDVEDSEKMKMLNHH 675
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI +GL+ IRVVKNLRVC DCH+ K I+ I++R+I+VRD RFH F++G
Sbjct: 676 SEKLAIAFGLLFIPHGLPIRVVKNLRVCGDCHNATKYISKISQREILVRDAVRFHLFKDG 735
Query: 481 TCSCGDYW 488
TCSCGD+W
Sbjct: 736 TCSCGDFW 743
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 189/380 (49%), Gaps = 38/380 (10%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+IHGQ++K G + LV++Y K G A Q+FDE+ E N VV MI +
Sbjct: 157 GRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERN-VVMYNTMITGLL 215
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G+V+++ +F +K +D++ WT MI GL++NG A A+DLFR+M+++ + ++ T
Sbjct: 216 RSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGS 275
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL+AC L AL+ G+ IH+ + + + N VG AL++MY +C + A VF+ M ++
Sbjct: 276 VLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKN 335
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH------------ 229
V ++ +++ G +G S EAV +F +M GI P T V+++C++
Sbjct: 336 VVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHC 395
Query: 230 ----GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLS---------------RVGRPE 270
GL+ + ++ YG IE + D +S + G+
Sbjct: 396 QALVSGLISF-ITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKAN 454
Query: 271 EAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRS--ADSGTYVLL 325
E D M + PD + ++LSAC G ++ G+Q + +L S Y +
Sbjct: 455 ETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCM 514
Query: 326 SNAYASSGKWKEAVQIRAKM 345
+ + +G+ +EA KM
Sbjct: 515 IDLFGRAGRLEEAKNFINKM 534
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 181/419 (43%), Gaps = 83/419 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+ +++H ++K L+ Y K G A +FD+MP+ N +T M++ Y
Sbjct: 23 QAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNT-MLSAY 81
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV-RPNEVTI 119
+ G + E+FS + +D V W ++I G V G + A+ + M +D V N +T
Sbjct: 82 SKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITF 141
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+L S G ++LGR IH + K VG +L++MY++ G + A QVF+E++E
Sbjct: 142 STMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQE 201
Query: 180 RDVTTYN-------------------------------SLIAGLAMHGRSIEAVEMFREM 208
R+V YN ++I GL +G EA+++FR+M
Sbjct: 202 RNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDM 261
Query: 209 INQGIRPTKVTFVGVLNACSHGGLVDL--GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRV 266
+G+ + TF VL AC GGL L G EI + R G + +VD+ +
Sbjct: 262 RQEGMAMDQYTFGSVLTAC--GGLRALKEGKEIHTLIIRS-GYNHNVFVGSALVDMYCKC 318
Query: 267 -------------------------------GRPEEAYDFITNMK---IAPDHIMLGSLL 292
G EEA +M+ I PD LGS++
Sbjct: 319 RSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVI 378
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSG--TYVLLSNA----YASSGKWKEAVQIRAKM 345
S+C L+ G Q C++ SG +++ +SNA Y G +++ Q+ +M
Sbjct: 379 SSCANLASLEEGAQ-----FHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEM 432
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 108/260 (41%), Gaps = 54/260 (20%)
Query: 157 LINMYSRCGDIDKALQVFEEMKE-------------------------------RDVTTY 185
LIN YS+ G+I A VF++M + RD ++
Sbjct: 46 LINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSW 105
Query: 186 NSLIAGLAMHGRSIEAVEMFREMINQGI-RPTKVTFVGVLNACSHGGLVDLGFEIFQSMT 244
NSLI+G +G +EAV+ + M+ G+ ++TF +L S G VDLG +I +
Sbjct: 106 NSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIV 165
Query: 245 RDYGIEPQIEHYGCIVDLLSRVGR---PEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+ +G + +VD+ +++G + +D + + + M+ LL + +
Sbjct: 166 K-FGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSK 224
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP------- 354
+L + +R DS ++ + +G EA+ + M++ G+ +
Sbjct: 225 RLFHGMKER-------DSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVL 277
Query: 355 ----GCSSIEVNNEIHEFIL 370
G +++ EIH I+
Sbjct: 278 TACGGLRALKEGKEIHTLII 297
>gi|356565103|ref|XP_003550784.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g47530-like [Glycine max]
Length = 515
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/488 (37%), Positives = 284/488 (58%), Gaps = 35/488 (7%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
++H + K G + + +++LY C DA ++FDEMP
Sbjct: 60 QVHCNIFKYGHQWDTLLLTAVMDLYSXCQRGGDACKVFDEMPP----------------- 102
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR--PNEVTIVC 121
+DTV W MI +RN AL LF +Q + + P++VT +
Sbjct: 103 ---------------RDTVAWNVMISCCIRNNRTRDALSLFDVLQNSSYKCEPDDVTCLL 147
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L AC+ L ALE G IH YM +H + ALI+MYSRCG +DKA +VF+ ++
Sbjct: 148 LLQACAHLYALEFGERIHGYMMEHGYGGALNLSNALISMYSRCGCLDKAXEVFKGTGNKN 207
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF-EIF 240
V +++++I+GLAM+G EA+E F EM+ GIRP T GVL+ACS+ G+VD G F
Sbjct: 208 VVSWSAMISGLAMNGYGREAIESFEEMLRIGIRPDDQTLTGVLSACSYSGMVDEGMMSFF 267
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
M+R++G+ P + HYGC+VDLL G ++A I +M PD +LL AC+IHG
Sbjct: 268 DRMSREFGVTPNVHHYGCMVDLLGHAGLLDKAXQLIMSMVEKPDSTTWRTLLGACRIHGH 327
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+ LGE++ L++ ++ ++G +VLL N Y+S+G W++ ++R MK +Q PGCS+IE
Sbjct: 328 VTLGERVIGHLIELKAQEAGDHVLLLNIYSSAGHWEKVAEVRKLMKNKSIQTTPGCSTIE 387
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+ +HEF++ D+ H + +IY+ + E+ +++ GY LH ++D EK + L+ H
Sbjct: 388 LKGVVHEFVVDDVSHTRNHEIYETLDEINHQLRIAGYVVELSSELHKMDDKEKGYVLSHH 447
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI +G+++T P TT+RV NLR+C DC + +K + + +I+RD NRFHHF G
Sbjct: 448 SEKLAIAFGVLATPPGTTLRVANNLRICVDCFNFLKHFSGVYNGDVILRDHNRFHHFRGG 507
Query: 481 TCSCGDYW 488
CSC +YW
Sbjct: 508 CCSCSNYW 515
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 35/198 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G IHG +++ G + L+ +Y +C
Sbjct: 161 GERIHGYMMEHGYGGALNLSNALISMYSRC------------------------------ 190
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G ++ A EVF K+ V W+AMI GL NG A++ F EM R +RP++ T+
Sbjct: 191 --GCLDKAXEVFKGTGNKNVVSWSAMISGLAMNGYGREAIESFEEMLRIGIRPDDQTLTG 248
Query: 122 VLSACSQLGALELG--RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
VLSACS G ++ G + + + N G ++++ G +DKA Q+ M E
Sbjct: 249 VLSACSYSGMVDEGMMSFFDRMSREFGVTPNVHHYGCMVDLLGHAGLLDKAXQLIMSMVE 308
Query: 180 R-DVTTYNSLIAGLAMHG 196
+ D TT+ +L+ +HG
Sbjct: 309 KPDSTTWRTLLGACRIHG 326
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 94/193 (48%), Gaps = 5/193 (2%)
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGR--WIHSY 141
+ MI + + L L+R+M+R + + ++ V+ +C +L L L +H
Sbjct: 5 YNTMIRACSMSDSPQKGLLLYRDMRRRGIAADPLSSSFVVKSCIRLXGLYLLGGVQVHCN 64
Query: 142 MGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEA 201
+ K+ + ++ A++++YS C A +VF+EM RD +N +I+ + R+ +A
Sbjct: 65 IFKYGHQWDTLLLTAVMDLYSXCQRGGDACKVFDEMPPRDTVAWNVMISCCIRNNRTRDA 124
Query: 202 VEMFREMINQGIR--PTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI 259
+ +F + N + P VT + +L AC+H ++ G I M ++G + +
Sbjct: 125 LSLFDVLQNSSYKCEPDDVTCLLLLQACAHLYALEFGERIHGYMM-EHGYGGALNLSNAL 183
Query: 260 VDLLSRVGRPEEA 272
+ + SR G ++A
Sbjct: 184 ISMYSRCGCLDKA 196
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/488 (39%), Positives = 278/488 (56%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG++IH Q G S+ + LV LY +CG+
Sbjct: 569 EGQQIHAQACVSGFSSDLPFQNALVTLYSRCGK--------------------------- 601
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+E ++ F + + D + W A++ G ++G AL +F M R+ + N T
Sbjct: 602 -----IEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFG 656
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+ A S+ ++ G+ +H+ + K D V ALI+MY++CG I A + F E+ +
Sbjct: 657 SAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK 716
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+ ++N++I + HG EA++ F +MI+ +RP VT VGVL+ACSH GLVD G F
Sbjct: 717 NEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYF 776
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+SM +YG+ P+ EHY C+VD+L+R G A +FI M I PD ++ +LLSAC +H
Sbjct: 777 ESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKN 836
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+++GE A LL+ DS TYVLLSN YA S KW R KMKE GV+KEPG S IE
Sbjct: 837 MEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIE 896
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
V N IH F +GD HP ++I++ Q+L + GY +L++++ +K+ + IH
Sbjct: 897 VKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIH 956
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI +GL+S I V+KNLRVCNDCH+ IK ++ ++ R+IIVRD RFHHFE G
Sbjct: 957 SEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGG 1016
Query: 481 TCSCGDYW 488
CSC DYW
Sbjct: 1017 ACSCKDYW 1024
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 156/354 (44%), Gaps = 37/354 (10%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H KLG SN L+ LY KC +
Sbjct: 368 GQQLHAYTTKLGFASNNKIEGALLNLYAKCAD---------------------------- 399
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+E A + F +V++ V W M+ ++ + +FR+MQ + + PN+ T
Sbjct: 400 ----IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPS 455
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L C +LG LELG IHS + K LN V LI+MY++ G +D A + +D
Sbjct: 456 ILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKD 515
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ ++IAG + +A+ FR+M+++GIR +V ++AC+ + G +I
Sbjct: 516 VVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHA 575
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
G + +V L SR G+ EE+Y + A D+I +L+S + G
Sbjct: 576 QACVS-GFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE-AGDNIAWNALVSGFQQSGNN 633
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASS--GKWKEAVQIRAKMKEAGVQKE 353
+ ++ R ++ D+ + S A+S K+ Q+ A + + G E
Sbjct: 634 EEALRVFVR-MNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSE 686
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 147/330 (44%), Gaps = 38/330 (11%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+ V +I+ Y +G V+ A VF +++KD W AMI GL +N A A+ LF +M
Sbjct: 180 DSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDM 239
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ P VLSAC ++ +LE+G +H + K + V AL+++Y G++
Sbjct: 240 YVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNL 299
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A +F M +RD TYN+LI GL+ G +A+E+F+ M G+ P T ++ AC
Sbjct: 300 ISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 359
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM-------- 279
S G + G ++ + T G + G +++L ++ E A D+
Sbjct: 360 SADGTLFRGQQL-HAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLW 418
Query: 280 --------------------------KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
+I P+ S+L C G L+LGEQI +++
Sbjct: 419 NVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 478
Query: 314 CRSADSGTYV--LLSNAYASSGKWKEAVQI 341
+ YV +L + YA GK A I
Sbjct: 479 T-NFQLNAYVCSVLIDMYAKLGKLDTAWDI 507
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 149/346 (43%), Gaps = 76/346 (21%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR++H Q+LKLGL SN KL + Y LF
Sbjct: 63 EGRKLHSQILKLGLDSNGCLSEKLFDFY-----------LF------------------- 92
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G + AF+VF + + W MI L + LF M +NV PNE T
Sbjct: 93 --KGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFS 150
Query: 121 CVLSACSQLG-ALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
VL AC A ++ IH+ + + + +V LI++YSR G +D A +VF+ ++
Sbjct: 151 GVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRL 210
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS----------- 228
+D +++ ++I+GL+ + EA+ +F +M GI PT F VL+AC
Sbjct: 211 KDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL 270
Query: 229 HGGLVDLGFE------------------------IFQSMTRDYGIEPQIEHYGCIVDLLS 264
HG ++ LGF IF +M++ + Y +++ LS
Sbjct: 271 HGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVT-----YNTLINGLS 325
Query: 265 RVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQI 307
+ G E+A + M + PD L SL+ AC G L G+Q+
Sbjct: 326 QCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL 371
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 146/325 (44%), Gaps = 38/325 (11%)
Query: 17 NRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMINCYVEHGLVENAFEVF 73
N+ T +++ + G+ + Q+ ++ + N + +V+I+ Y + G ++ A+++
Sbjct: 449 NQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 508
Query: 74 SRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALE 133
R KD V WT MI G + +AL FR+M +R +EV + +SAC+ L AL+
Sbjct: 509 IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALK 568
Query: 134 LGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLA 193
G+ IH+ + AL+ +YSRCG I+++ FE+ + D +N+L++G
Sbjct: 569 EGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQ 628
Query: 194 MHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQI 253
G + EA+ +F M +GI TF + A S + G ++ +T+ G + +
Sbjct: 629 QSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSET 687
Query: 254 E-------------------------------HYGCIVDLLSRVGRPEEAYDFITNM--- 279
E + I++ S+ G EA D M
Sbjct: 688 EVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHS 747
Query: 280 KIAPDHIMLGSLLSACKIHGKLQLG 304
+ P+H+ L +LSAC G + G
Sbjct: 748 NVRPNHVTLVGVLSACSHIGLVDKG 772
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 125/294 (42%), Gaps = 59/294 (20%)
Query: 104 FREMQRDNV-----RPNEVTIVCVLSACSQL-GALELGRWIHSYMGKHRIDLNHIVGGAL 157
F+E + D+V RPN T+ +L C + G+L+ GR +HS + K +D N + L
Sbjct: 27 FQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKL 86
Query: 158 INMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTK 217
+ Y GD+ A +VF+EM ER + T+N +I LA E +F M+++ + P +
Sbjct: 87 FDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNE 146
Query: 218 VTFVGVLNAC------------------------------------SHGGLVDLGFEIFQ 241
TF GVL AC S G VDL +F
Sbjct: 147 GTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFD 206
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPE---EAYDFITNM---KIAPDHIMLGSLLSAC 295
+ +++ + V ++S + + E EA +M I P S+LSAC
Sbjct: 207 GL--------RLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSAC 258
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYV--LLSNAYASSGKWKEAVQIRAKMKE 347
K L++GEQ+ +L S TYV L + Y G A I + M +
Sbjct: 259 KKIESLEIGEQLHGLVLKL-GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQ 311
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/488 (39%), Positives = 278/488 (56%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG++IH Q G S+ + LV LY +CG+
Sbjct: 609 EGQQIHAQACVSGFSSDLPFQNALVTLYSRCGK--------------------------- 641
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+E ++ F + + D + W A++ G ++G AL +F M R+ + N T
Sbjct: 642 -----IEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFG 696
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+ A S+ ++ G+ +H+ + K D V ALI+MY++CG I A + F E+ +
Sbjct: 697 SAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK 756
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+ ++N++I + HG EA++ F +MI+ +RP VT VGVL+ACSH GLVD G F
Sbjct: 757 NEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYF 816
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+SM +YG+ P+ EHY C+VD+L+R G A +FI M I PD ++ +LLSAC +H
Sbjct: 817 ESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKN 876
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+++GE A LL+ DS TYVLLSN YA S KW R KMKE GV+KEPG S IE
Sbjct: 877 MEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIE 936
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
V N IH F +GD HP ++I++ Q+L + GY +L++++ +K+ + IH
Sbjct: 937 VKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIH 996
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI +GL+S I V+KNLRVCNDCH+ IK ++ ++ R+IIVRD RFHHFE G
Sbjct: 997 SEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGG 1056
Query: 481 TCSCGDYW 488
CSC DYW
Sbjct: 1057 ACSCKDYW 1064
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 156/354 (44%), Gaps = 37/354 (10%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H KLG SN L+ LY KC +
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAKCAD---------------------------- 439
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+E A + F +V++ V W M+ ++ + +FR+MQ + + PN+ T
Sbjct: 440 ----IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPS 495
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L C +LG LELG IHS + K LN V LI+MY++ G +D A + +D
Sbjct: 496 ILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKD 555
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ ++IAG + +A+ FR+M+++GIR +V ++AC+ + G +I
Sbjct: 556 VVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHA 615
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
G + +V L SR G+ EE+Y + A D+I +L+S + G
Sbjct: 616 QACVS-GFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE-AGDNIAWNALVSGFQQSGNN 673
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASS--GKWKEAVQIRAKMKEAGVQKE 353
+ ++ R ++ D+ + S A+S K+ Q+ A + + G E
Sbjct: 674 EEALRVFVR-MNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSE 726
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 147/330 (44%), Gaps = 38/330 (11%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+ V +I+ Y +G V+ A VF +++KD W AMI GL +N A A+ LF +M
Sbjct: 220 DSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDM 279
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ P VLSAC ++ +LE+G +H + K + V AL+++Y G++
Sbjct: 280 YVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNL 339
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A +F M +RD TYN+LI GL+ G +A+E+F+ M G+ P T ++ AC
Sbjct: 340 ISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 399
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM-------- 279
S G + G ++ + T G + G +++L ++ E A D+
Sbjct: 400 SADGTLFRGQQL-HAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLW 458
Query: 280 --------------------------KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
+I P+ S+L C G L+LGEQI +++
Sbjct: 459 NVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 518
Query: 314 CRSADSGTYV--LLSNAYASSGKWKEAVQI 341
+ YV +L + YA GK A I
Sbjct: 519 T-NFQLNAYVCSVLIDMYAKLGKLDTAWDI 547
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 149/346 (43%), Gaps = 76/346 (21%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR++H Q+LKLGL SN KL + Y LF
Sbjct: 103 EGRKLHSQILKLGLDSNGCLSEKLFDFY-----------LFK------------------ 133
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G + AF+VF + + W MI L + LF M +NV PNE T
Sbjct: 134 ---GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFS 190
Query: 121 CVLSACSQLG-ALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
VL AC A ++ IH+ + + + +V LI++YSR G +D A +VF+ ++
Sbjct: 191 GVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRL 250
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS----------- 228
+D +++ ++I+GL+ + EA+ +F +M GI PT F VL+AC
Sbjct: 251 KDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL 310
Query: 229 HGGLVDLGFE------------------------IFQSMTRDYGIEPQIEHYGCIVDLLS 264
HG ++ LGF IF +M++ + Y +++ LS
Sbjct: 311 HGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVT-----YNTLINGLS 365
Query: 265 RVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQI 307
+ G E+A + M + PD L SL+ AC G L G+Q+
Sbjct: 366 QCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL 411
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 146/325 (44%), Gaps = 38/325 (11%)
Query: 17 NRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMINCYVEHGLVENAFEVF 73
N+ T +++ + G+ + Q+ ++ + N + +V+I+ Y + G ++ A+++
Sbjct: 489 NQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Query: 74 SRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALE 133
R KD V WT MI G + +AL FR+M +R +EV + +SAC+ L AL+
Sbjct: 549 IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALK 608
Query: 134 LGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLA 193
G+ IH+ + AL+ +YSRCG I+++ FE+ + D +N+L++G
Sbjct: 609 EGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQ 668
Query: 194 MHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQI 253
G + EA+ +F M +GI TF + A S + G ++ +T+ G + +
Sbjct: 669 QSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSET 727
Query: 254 E-------------------------------HYGCIVDLLSRVGRPEEAYDFITNM--- 279
E + I++ S+ G EA D M
Sbjct: 728 EVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHS 787
Query: 280 KIAPDHIMLGSLLSACKIHGKLQLG 304
+ P+H+ L +LSAC G + G
Sbjct: 788 NVRPNHVTLVGVLSACSHIGLVDKG 812
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 125/294 (42%), Gaps = 59/294 (20%)
Query: 104 FREMQRDNV-----RPNEVTIVCVLSACSQL-GALELGRWIHSYMGKHRIDLNHIVGGAL 157
F+E + D+V RPN T+ +L C + G+L+ GR +HS + K +D N + L
Sbjct: 67 FQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKL 126
Query: 158 INMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTK 217
+ Y GD+ A +VF+EM ER + T+N +I LA E +F M+++ + P +
Sbjct: 127 FDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNE 186
Query: 218 VTFVGVLNAC------------------------------------SHGGLVDLGFEIFQ 241
TF GVL AC S G VDL +F
Sbjct: 187 GTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFD 246
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPE---EAYDFITNM---KIAPDHIMLGSLLSAC 295
+ +++ + V ++S + + E EA +M I P S+LSAC
Sbjct: 247 GL--------RLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSAC 298
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYV--LLSNAYASSGKWKEAVQIRAKMKE 347
K L++GEQ+ +L S TYV L + Y G A I + M +
Sbjct: 299 KKIESLEIGEQLHGLVLKL-GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQ 351
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/489 (38%), Positives = 289/489 (59%), Gaps = 34/489 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+IH + K ++ L+++Y K G +A +F+ +PE DVV+ T +I+ Y
Sbjct: 130 GRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPE-RDVVSCTAIISGYA 188
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ GL E A E+F R +QR+ + N VT
Sbjct: 189 QLGLDEEALELFCR-------------------------------LQREGMSSNYVTYAS 217
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+A S L AL+ G+ +HS++ + + ++ +LI+MYS+CG+++ A ++F M R
Sbjct: 218 LLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRT 277
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSHGGLVDLGFEIF 240
V ++N+++ G + HG+ IE V++F+ M + ++P VTF+ VL+ CSHGGL D G E+F
Sbjct: 278 VISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMF 337
Query: 241 QSMTRDYG-IEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
M IE IEHYGC++DLL R GR EEA++ I M P + GSLL AC++H
Sbjct: 338 DEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHS 397
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+GE + RLL+ ++G YV+LSN YAS+G+W++ +R M E V KEPG S I
Sbjct: 398 NTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGRWEDVRNVRELMMEKAVIKEPGRSWI 457
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E++ IH F D HP+RE+++ K++EL K GY P VL+D+++ +KE L
Sbjct: 458 ELDQTIHTFYASDRSHPRREEVFLKVRELLVKFKESGYVPDQSCVLYDVDEEQKEKILLG 517
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LA+ +GLIST +RV+KNLR+C DCH+ K ++ + R++ +RD+NRFHH
Sbjct: 518 HSEKLALAFGLISTSEGVPLRVIKNLRICVDCHNFAKFVSKVYGRQVSIRDKNRFHHVAG 577
Query: 480 GTCSCGDYW 488
G CSCGDYW
Sbjct: 578 GICSCGDYW 586
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 163/364 (44%), Gaps = 50/364 (13%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+ +H ++K +L+ LY KC A +FDEM E
Sbjct: 28 EGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRE-------------- 73
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++ V WTAMI G + G + AL LF +M R + PNE T
Sbjct: 74 ------------------RNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFA 115
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VLS+C+ ELGR IHS++ K + + VG +L++MY++ G I +A VFE + ER
Sbjct: 116 TVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPER 175
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV + ++I+G A G EA+E+F + +G+ VT+ +L A S +D G ++
Sbjct: 176 DVVSCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVH 235
Query: 241 QSMTRDYGIEPQIEHY----GCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
+ R ++ Y ++D+ S+ G A NM + I ++L
Sbjct: 236 SHVLR-----CELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTV-ISWNAMLVGYS 289
Query: 297 IHGKLQLGEQIAKRLLDCR-----SADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
HGK G ++ K R DS T++ + + + G + +++ +M G +
Sbjct: 290 KHGK---GIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDE 346
Query: 352 KEPG 355
E G
Sbjct: 347 IEAG 350
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/488 (39%), Positives = 282/488 (57%), Gaps = 33/488 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H Q L S LV++Y KC F++A +F +P+
Sbjct: 370 GRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQ--------------- 414
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ TV WTA+I G V+ G L LF +M+ N+R ++ T
Sbjct: 415 -----------------RTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFAT 457
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL A + +L LG+ +H+++ + N G L++MY++CG I A+QVFEEM +R+
Sbjct: 458 VLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRN 517
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
++N+LI+ A +G A+ F +MI G++P V+ +GVL ACSH G V+ G E FQ
Sbjct: 518 AVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQ 577
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+M+ YGI P+ +HY C++DLL R GR EA + M PD IM S+L+AC+IH
Sbjct: 578 AMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQ 637
Query: 302 QLGEQIAKRLLDC-RSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
L E+ A++L + D+ YV +SN YA++G+W++ ++ M+E G++K P S +E
Sbjct: 638 SLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVE 697
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
VN++IH F D HP ++I +K+ EL ++ EGY P T V+ D+++ K +L H
Sbjct: 698 VNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYH 757
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLA+ + LIST I V+KNLR C DCH+ IKLI+ I KR+I VRD +RFHHF G
Sbjct: 758 SERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEG 817
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 818 VCSCGDYW 825
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 123/264 (46%), Gaps = 14/264 (5%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+ R + +++K G ++ +VE + G+ A +++DEMP N V++ MI+ +
Sbjct: 31 DTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKN-TVSTNTMISGH 89
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN--VRPNEVT 118
V+ G V +A ++F + + V WT ++ RN A LFR+M R + P+ VT
Sbjct: 90 VKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVT 149
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHI--VGGALINMYSRCGDIDKALQVFEE 176
+L C+ +H++ K D N V L+ Y +D A +FEE
Sbjct: 150 FTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEE 209
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL- 235
+ E+D T+N+LI G G E++ +F +M G +P+ TF GVL A GL D
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVV--GLHDFA 267
Query: 236 ------GFEIFQSMTRDYGIEPQI 253
+ +RD + QI
Sbjct: 268 LGQQLHALSVTTGFSRDASVGNQI 291
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 147/352 (41%), Gaps = 68/352 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H + G + S ++++ Y K + LFDEMPE D V+ V+I+ Y
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPEL-DFVSYNVVISSYS 327
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ E +L FREMQ
Sbjct: 328 QADQYE-------------------------------ASLHFFREMQCMGFDRRNFPFAT 356
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+LS + L +L++GR +H D VG +L++MY++C ++A +F+ + +R
Sbjct: 357 MLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRT 416
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
++ +LI+G G +++F +M +R + TF VL A + + LG ++
Sbjct: 417 TVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHA 476
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+ R +E G +VD+ ++ G ++A +
Sbjct: 477 FIIRSGNLENVFSGSG-LVDMYAKCGSIKDA----------------------------V 507
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
Q+ E++ R ++ ++ L +A+A +G + A+ AKM E+G+Q +
Sbjct: 508 QVFEEMPDR-------NAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPD 552
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/405 (20%), Positives = 158/405 (39%), Gaps = 86/405 (21%)
Query: 24 LVELYGKCGEFKDAMQLFDEM------------------PECNDVVA------------- 52
L+ Y + F +A +LF +M P CND V
Sbjct: 116 LMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVK 175
Query: 53 -----------STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARAL 101
S V++ Y E ++ A +F + KD+V + +I G ++G ++
Sbjct: 176 LGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESI 235
Query: 102 DLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMY 161
LF +M++ +P++ T VL A L LG+ +H+ + VG +++ Y
Sbjct: 236 HLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFY 295
Query: 162 SRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFV 221
S+ + + +F+EM E D +YN +I+ + + ++ FREM G F
Sbjct: 296 SKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFA 355
Query: 222 GVLNACSHGGLVDLGFEIF-QSMTRDYGIEPQIEHYG-CIVDLLSRVGRPEEA------- 272
+L+ ++ + +G ++ Q++ I H G +VD+ ++ EEA
Sbjct: 356 TMLSIAANLSSLQMGRQLHCQAL---LATADSILHVGNSLVDMYAKCEMFEEAELIFKSL 412
Query: 273 ------------------------YDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGE 305
T M+ + D ++L A L LG+
Sbjct: 413 PQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGK 472
Query: 306 QIAKRLL---DCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
Q+ ++ + + SG+ L + YA G K+AVQ+ +M +
Sbjct: 473 QLHAFIIRSGNLENVFSGSG--LVDMYAKCGSIKDAVQVFEEMPD 515
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/441 (40%), Positives = 279/441 (63%), Gaps = 2/441 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
ND V +I+ Y + G V +A ++F ++K K V W +MI G +NG A+ LF +M
Sbjct: 634 NDFV-QNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQM 692
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ V+ +++T + V+ ACS LG LE G+W+H + + + + + AL +MYS+CG++
Sbjct: 693 YMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGEL 752
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A VF+ M ER + +++ +IAG MHG+ + +F +M+ GI+P +TF+ +L+AC
Sbjct: 753 QMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSAC 812
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SH G V+ G F SM+ ++G+EP+ +H+ C+VDLLSR G AY IT++ + +
Sbjct: 813 SHAGAVEEGKLYFNSMS-EFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSI 871
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
G+LL+ C+IH ++ + + I K LLD +AD+G Y LLSN YA G W + ++R+ MK
Sbjct: 872 WGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKS 931
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
G++K PG S+IE++ +I+ F GD H Q + IY+ ++ + +V + Y + +
Sbjct: 932 KGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPDNSIVG 991
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
+ KE + HSE+LAI +G+I+T+P TT+R+ KNLRVC DCHS K+ + IT R+II
Sbjct: 992 TSKFNKENNVVSHSEKLAIAFGIINTRPGTTLRISKNLRVCRDCHSFAKIASKITGREII 1051
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
+RD NRFH F NG+CSC DYW
Sbjct: 1052 MRDLNRFHCFRNGSCSCNDYW 1072
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 154/302 (50%), Gaps = 8/302 (2%)
Query: 55 VMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP 114
++ Y + G + + +VF +K K + W +I RNG+ AL LF +MQ + P
Sbjct: 540 ALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMP 599
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
+ ++ LSAC + +LG IH Y+ K + N V ALI+MY++CG + A ++F
Sbjct: 600 DSYSLASSLSACGTISFSQLGAQIHGYIIKTG-NFNDFVQNALIDMYAKCGFVHSANKMF 658
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
E++KE+ + T+NS+I G + +G S+EA+ +F +M ++ K+TF+ V+ ACSH G ++
Sbjct: 659 EKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLE 718
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSL 291
G + + YG+ + D+ S+ G + A +D ++ I +M+
Sbjct: 719 KGKWVHHKLIM-YGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGY 777
Query: 292 LSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
+I+ + L Q+ L + T++ + +A + +G +E M E GV+
Sbjct: 778 GMHGQINATISLFNQM---LGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSEFGVE 834
Query: 352 KE 353
+
Sbjct: 835 PK 836
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 168/364 (46%), Gaps = 39/364 (10%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
++H + GL + KL+E Y + G F+ + ++FD P+ D V+I CYV
Sbjct: 366 QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPK-PDSFMWGVLIKCYVWG 424
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLV--------------RNGEMARALDLFREMQR 109
G E A ++ + +D + + V +NG+ + LD+F +M
Sbjct: 425 GFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQASEGLDMFSQMIS 484
Query: 110 DNVRPNEVTIVCVLSACSQLGALELGRW--------IHSYMGKHRIDLN-HIVGGALINM 160
+ V P+ VT++ V ACS+LG+L LGR +H ++ + +D +G AL+ +
Sbjct: 485 EAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELDFLGPALMEL 544
Query: 161 YSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTF 220
Y+ G++ +VFE +KE+ + ++N+LI+ +G+ EA+ +F +M QG+ P +
Sbjct: 545 YADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSL 604
Query: 221 VGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
L+AC LG +I + + +++ ++D+ ++ G A +K
Sbjct: 605 ASSLSACGTISFSQLGAQIHGYIIKTGNFNDFVQN--ALIDMYAKCGFVHSANKMFEKIK 662
Query: 281 IAPDHIMLGSLLSACKIHG----KLQLGEQIAKRLLDCRSADSGTYVLLSNA-----YAS 331
+ S++ +G + L +Q+ ++C D T++ + A Y
Sbjct: 663 -EKSLVTWNSMICGFSQNGYSVEAITLFDQM---YMNCVKMDKLTFLSVIQACSHLGYLE 718
Query: 332 SGKW 335
GKW
Sbjct: 719 KGKW 722
>gi|326502116|dbj|BAK06550.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 542
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/449 (43%), Positives = 275/449 (61%), Gaps = 10/449 (2%)
Query: 50 VVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
V + +++ Y GL + A +F + K V W +D L N + ALDLFREMQR
Sbjct: 94 TVVANSLLHLYASCGLPDAALALFRCIPAKSLVSWNTAVDALASNADHLGALDLFREMQR 153
Query: 110 DN-VRPNEVTIVCVLSACSQLGALELGRWIHSYM-----GKHRIDLNHIVGGALINMYSR 163
D + P+ T+ VL AC+ GAL LG + H+ + G + + ++ +L+++Y +
Sbjct: 154 DTGLAPDAYTLQSVLGACAGAGALSLGVYAHALLLRELGGHGDVSRDVLINNSLVDLYGK 213
Query: 164 CGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN-QGIRPTKVTFVG 222
CG ++ A QVF+ M ERDVT++N I LA HG E+VE+F M + + P +TFV
Sbjct: 214 CGAVELARQVFDRMPERDVTSWNVAILTLANHGCVRESVELFDRMTRVENVVPNAITFVA 273
Query: 223 VLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIA 282
VL+AC+HGG+V+ G F M +Y I P+IEHYGC+VD+L+R G EEA D ++ M
Sbjct: 274 VLSACNHGGMVEEGRRYFDMMVGEYRIRPRIEHYGCMVDILARAGFIEEALDVVSGMNCR 333
Query: 283 PDHIMLGSLLSAC-KIHGKLQLGEQIAKRLLDCRS-ADSGTYVLLSNAYASSGKWKEAVQ 340
PD I+ SLL AC + + L+L E +AK LD A SG YVLLS YA + KW +
Sbjct: 334 PDAIIWRSLLDACCRQNAGLELSEAMAKLALDVPDDAVSGVYVLLSRVYAFAQKWNDVGM 393
Query: 341 IRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPS 400
+R M + G++KEPG SSIE++ +H+F+ GD HPQ E+IY K+ E++Q + GY P
Sbjct: 394 VRRLMSDEGLKKEPGFSSIEMDGLVHQFVAGDTSHPQSEEIYAKLDEIEQRLASSGYKPD 453
Query: 401 -TEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIA 459
+E + D K AL +HSERLAI +GL+ IR++KNLRVC DCH++ KLI
Sbjct: 454 LSEARMVAGMDHTKGAALRLHSERLAISFGLLKGTAGAPIRILKNLRVCKDCHTISKLIT 513
Query: 460 NITKRKIIVRDRNRFHHFENGTCSCGDYW 488
+ +IIVRDR RFHHF++G CSC DYW
Sbjct: 514 GLYGVEIIVRDRIRFHHFKDGACSCKDYW 542
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 87/186 (46%), Gaps = 38/186 (20%)
Query: 6 HGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGL 65
HG V + L +N LV+LYGKCG + A Q+FD MPE DV + V I HG
Sbjct: 194 HGDVSRDVLINN-----SLVDLYGKCGAVELARQVFDRMPE-RDVTSWNVAILTLANHGC 247
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
V + E+F R M R +NV PN +T V VLSA
Sbjct: 248 VRESVELFDR---------------------MTRV---------ENVVPNAITFVAVLSA 277
Query: 126 CSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER-DVT 183
C+ G +E G R+ +G++RI G ++++ +R G I++AL V M R D
Sbjct: 278 CNHGGMVEEGRRYFDMMVGEYRIRPRIEHYGCMVDILARAGFIEEALDVVSGMNCRPDAI 337
Query: 184 TYNSLI 189
+ SL+
Sbjct: 338 IWRSLL 343
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 8/196 (4%)
Query: 93 RNGEMA-RALDLFREMQRDNVRPNEVTIV-CVLSACSQLGALELGRWIHSYMGKHRIDLN 150
R ++A RAL LFR + P + LSA S L AL GR +H+ K +
Sbjct: 33 RRADLAHRALLLFRSLHASPSPPPPHFSLPAALSAASFLSALPEGRQLHALAAKLALAPA 92
Query: 151 H-IVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
H +V +L+++Y+ CG D AL +F + + + ++N+ + LA + + A+++FREM
Sbjct: 93 HTVVANSLLHLYASCGLPDAALALFRCIPAKSLVSWNTAVDALASNADHLGALDLFREMQ 152
Query: 210 -NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYG----IEPQIEHYGCIVDLLS 264
+ G+ P T VL AC+ G + LG + R+ G + + +VDL
Sbjct: 153 RDTGLAPDAYTLQSVLGACAGAGALSLGVYAHALLLRELGGHGDVSRDVLINNSLVDLYG 212
Query: 265 RVGRPEEAYDFITNMK 280
+ G E A M
Sbjct: 213 KCGAVELARQVFDRMP 228
>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 687
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/491 (41%), Positives = 288/491 (58%), Gaps = 40/491 (8%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++H Q LK L N LV++YGKC +A ++F+ +PE
Sbjct: 233 GSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPE--------------- 277
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K+ V WTA++ +N AL LF +M+ + VRPNE T
Sbjct: 278 -----------------KNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAV 320
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNH----IVGGALINMYSRCGDIDKALQVFEEM 177
L++C+ L L+ G + +G + H V AL+NMYS+ G ++ A +VF M
Sbjct: 321 ALNSCAGLATLKNG----NALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSM 376
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
RDV ++NS+I G A HGR+ EA+E F +M+ P+ VTF+GVL+AC+ GLVD GF
Sbjct: 377 PCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGF 436
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
M ++ G++P EHY C+V LL RVGR +EA FI + I D + SLLS+C++
Sbjct: 437 YYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQV 496
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
+ LG ++A+++ + D GTYVLLSN YA + +W V++R M+E GV+KEPG S
Sbjct: 497 YRNYGLGHRVAEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVS 556
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
I+V +E+H F D +HP EQI KK+QEL +K+ GY P+ V LHD+ED +KE L
Sbjct: 557 WIQVGSEVHVFTSEDKKHPYMEQITKKLQELIDKIKVIGYVPNIAVALHDVEDEQKEEHL 616
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LA+ +GLI T IR++KN+R+C+DCH IKLI+ T R+I+VRD RFH
Sbjct: 617 MYHSEKLALAFGLIRTPKGEAIRIMKNVRICDDCHVAIKLISLATGRRIVVRDTVRFHCI 676
Query: 478 ENGTCSCGDYW 488
E+G CSC DYW
Sbjct: 677 EDGVCSCDDYW 687
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 166/360 (46%), Gaps = 46/360 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+ HG +K GL + ++ +Y +C +A+++FD +
Sbjct: 132 GRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMDEAVKVFDNV----------------- 174
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++F VF+ + +MI+G + G+M + + R M R+ + + V+ V
Sbjct: 175 ------SSFNVFA---------FNSMINGFLDRGQMDGSTSIVRSMVRNVGQWDHVSYVA 219
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL C+ + LG +H+ K R++LN VG AL++MY +C +A +VFE + E++
Sbjct: 220 VLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKN 279
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL----GF 237
+ ++ +++ + +A+++F +M +G+RP + T+ LN+C+ GL L
Sbjct: 280 IVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCA--GLATLKNGNAL 337
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
T +G+ P ++++ S+ G E+A +M D + S++
Sbjct: 338 GACTMKTGHWGLLPVCN---ALMNMYSKSGSVEDARRVFLSMP-CRDVVSWNSIIIGYAH 393
Query: 298 HGKLQLGEQIAKRLLDCRSADSG-TYVLLSNAYASSGKWKEAV-QIRAKMKEAGVQKEPG 355
HG+ + + +L S T++ + +A A G E + MKE GV+ PG
Sbjct: 394 HGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVK--PG 451
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 109/225 (48%), Gaps = 6/225 (2%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DVV +I YV+ G + A +VF + ++ V ++ G +G AL L R
Sbjct: 49 DVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASSGRHRDALALLRVA- 107
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ NE + ++A + + + ++GR H Y K + + V A+++MY +C +D
Sbjct: 108 --DFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMD 165
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+A++VF+ + +V +NS+I G G+ + + R M+ + V++V VL C+
Sbjct: 166 EAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRNVGQWDHVSYVAVLGHCA 225
Query: 229 HGGLVDLGFEIF-QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
V LG ++ Q++ R +E + +VD+ + P EA
Sbjct: 226 STKEVVLGSQVHTQALKRR--LELNVYVGSALVDMYGKCDFPHEA 268
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 130 GALELGRWIHSYMGK-HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
G L LG+ +H+ + + R D+ + LI +Y +CG + A QVF+ M R+ + N L
Sbjct: 30 GELSLGKAVHARVVRAARFDV--VQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLL 87
Query: 189 IAGLAMHGRSIEAVEMFR 206
++G A GR +A+ + R
Sbjct: 88 MSGYASSGRHRDALALLR 105
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/487 (38%), Positives = 289/487 (59%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++HG V+KLG + + L+ Y C +
Sbjct: 221 GVQVHGHVVKLGCFFHEFISVSLITFYANCMK---------------------------- 252
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+E+A ++F+ K+ V WTA++ V N + AL +F +M + PN+ T
Sbjct: 253 ----IEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSI 308
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
L AC L AL+ G+ IH+ K ++ + VG +L+ MY+ CG+++ A+ VF + E+D
Sbjct: 309 TLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKD 368
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++NS+I G A HG + A+ F +MI +G+ P ++TF G+L+ACS G++ G F+
Sbjct: 369 IVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFE 428
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
++R + +HY C+VD+L R G+ +EA + + M + + ++ +LLSAC++H L
Sbjct: 429 YISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVHSNL 488
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++ E+ AK +LD S YVLLSN YAS+G+W + ++R KMK+ G+ K+PG S + +
Sbjct: 489 EVAERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRMRVKMKQGGLVKQPGSSWVVL 548
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ HEF+ D HP E+IY+K+ L + +K GY P + LHD+ED +KE L+ HS
Sbjct: 549 RGKKHEFLSADRSHPLSERIYEKLDWLGKKLKEFGYVPDQKFALHDVEDEQKEEMLSFHS 608
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ERLAI +GL+ST +TI V+KNLRVC DCHS+IKL++ I RKI+VRD RFHHF+NG
Sbjct: 609 ERLAIAFGLVSTVEGSTITVMKNLRVCGDCHSVIKLMSKIVGRKIVVRDSGRFHHFKNGI 668
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 669 CSCSDYW 675
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 147/337 (43%), Gaps = 39/337 (11%)
Query: 31 CGEFKDAMQLFDEMPECN------------------------------DVVASTVMINCY 60
CG A +LFDEMPE N DV A M++ Y
Sbjct: 87 CGNLGMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRLFLDMHVKDVAAWNAMVHGY 146
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
E+G VE +F + V+D + WT+MI GL NG+ AL +F++M R V P T
Sbjct: 147 FENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFA 206
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
CVLSAC+ LG +H ++ K + + +LI Y+ C I+ A ++F E +
Sbjct: 207 CVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTK 266
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+V + +L+ + + +A+ +F +M G P + TF L AC +D G EI
Sbjct: 267 NVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEI- 325
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG- 299
+M G+E + +V + + G A N+ D + S++ HG
Sbjct: 326 HTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNIN-EKDIVSWNSIIVGSAQHGF 384
Query: 300 ---KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSG 333
L Q+ +R +D + T+ L +A + SG
Sbjct: 385 GLWALIFFNQMIRRGVD---PNEITFTGLLSACSRSG 418
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 116/203 (57%), Gaps = 9/203 (4%)
Query: 37 AMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGE 96
A +FD++P N + T MI Y + + +A ++F R+ V+D V W +MI G + G
Sbjct: 31 ARLIFDKIPSPN-LHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGN 89
Query: 97 MARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGA 156
+ A LF EM NV ++ +++ + G +EL + + ++ H D+ A
Sbjct: 90 LGMATRLFDEMPEKNV----ISWTTMVNGYLKFGRVELAQRL--FLDMHVKDV--AAWNA 141
Query: 157 LINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPT 216
+++ Y G +++ +++FEEM RDV ++ S+I GL ++G+S EA+ +F++M+ G+ PT
Sbjct: 142 MVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPT 201
Query: 217 KVTFVGVLNACSHGGLVDLGFEI 239
TF VL+AC++ +LG ++
Sbjct: 202 WSTFACVLSACANAVEFNLGVQV 224
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 33/178 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+EIH +KLGL ++ LV +Y +CG A+ +F + E
Sbjct: 321 KGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINE-------------- 366
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
KD V W ++I G ++G AL F +M R V PNE+T
Sbjct: 367 ------------------KDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFT 408
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRID-LNHIVGGALINMYSRCGDIDKALQVFEEM 177
+LSACS+ G L GR Y+ +++ + L ++++ RCG +D+A ++ M
Sbjct: 409 GLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYM 466
>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 720
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/440 (42%), Positives = 276/440 (62%), Gaps = 4/440 (0%)
Query: 50 VVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
+ + T ++ Y+ LV+++ VF +K + V WT++I GLV+NG AL FR+M R
Sbjct: 284 LASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREETALIEFRKMMR 343
Query: 110 DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDK 169
D+V+PN T+ L CS L E GR +H + K+ D + G LI +Y +CG D
Sbjct: 344 DSVKPNSFTLSSALRGCSNLAMFEEGRQVHGIVSKYGFDRDKYAGSGLIELYGKCGCSDM 403
Query: 170 ALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH 229
A VF+ + E DV + N++I A +G EA+E+F MIN G++P VT + VL AC++
Sbjct: 404 ARLVFDTLSEVDVISLNTMIYSYAQNGFGREALELFERMINLGLQPNDVTVLSVLLACNN 463
Query: 230 GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLG 289
GLV+ G E+F S +D I +HY C+VD+L R GR EEA IT + PD ++
Sbjct: 464 SGLVEEGCELFDSFRKD-KIMLTNDHYACMVDMLGRAGRLEEAEMLITEV-TNPDLVLWR 521
Query: 290 SLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
+LLSACK+H K+++ E+I +++L+ D GT +LLSN YAS+GKWK +++++KMKE
Sbjct: 522 TLLSACKVHRKVEMAERITRKILEIAPGDEGTLILLSNLYASTGKWKRVIEMKSKMKEMK 581
Query: 350 VQKEPGCSSIEVNNEIHEFILGDI-RHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
++K P S +E++ E H F+ GD+ HP EQI + ++EL + K GY V D+
Sbjct: 582 LKKNPAMSWVEIDKETHTFMAGDLFSHPNSEQILENLEELIKKAKDLGYVEDKSCVFQDM 641
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
E+ KE +L HSE+LAI + + +IR++KNLRVC DCHS IK+++ I KR+II
Sbjct: 642 EETAKERSLHQHSEKLAIAFA-VWRNVGGSIRILKNLRVCVDCHSWIKIVSRIIKREIIC 700
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD RFHHF +G+CSCGDYW
Sbjct: 701 RDSKRFHHFRDGSCSCGDYW 720
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 136/293 (46%), Gaps = 35/293 (11%)
Query: 46 ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
E ++V + +++ YV+ G A V RV+ KD V TA+I G + GE A+ F+
Sbjct: 179 EVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQ 238
Query: 106 EMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG 165
M + V+PNE T VL +C L + G+ IH M K + +L+ MY RC
Sbjct: 239 SMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCS 298
Query: 166 DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
+D +L VF+ +K + T+ SLI+GL +GR A+ FR+M+ ++P T L
Sbjct: 299 LVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREETALIEFRKMMRDSVKPNSFTLSSALR 358
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQ-------IEHYG---------CIVDLLSRV--- 266
CS+ + + G ++ + YG + IE YG + D LS V
Sbjct: 359 GCSNLAMFEEGRQV-HGIVSKYGFDRDKYAGSGLIELYGKCGCSDMARLVFDTLSEVDVI 417
Query: 267 --------------GRPE-EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLG 304
GR E ++ + N+ + P+ + + S+L AC G ++ G
Sbjct: 418 SLNTMIYSYAQNGFGREALELFERMINLGLQPNDVTVLSVLLACNNSGLVEEG 470
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 143/339 (42%), Gaps = 67/339 (19%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
+ I Q+LK G S KLV+ KCGE A QLFD MPE
Sbjct: 67 KNIQAQMLKSGFPVELSGS-KLVDASLKCGEIGYARQLFDGMPE---------------- 109
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
+ V W ++I +++ A++++R M +NV P+E T+ V
Sbjct: 110 ----------------RHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSV 153
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHI-VGGALINMYSRCGDIDKALQVFEEMKERD 181
A S L + + H ++++++ VG AL++MY + G +A V + ++E+D
Sbjct: 154 FKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKD 213
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HG 230
V +LI G + G EAV+ F+ M+ + ++P + T+ VL +C HG
Sbjct: 214 VVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHG 273
Query: 231 GLVDLGFE--------IFQSMTRDYGIEPQIEHYGCI-----------VDLLSRVGRPEE 271
+V GFE + R ++ + + CI + L + GR E
Sbjct: 274 LMVKSGFESALASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREET 333
Query: 272 AY-DFITNMK--IAPDHIMLGSLLSACKIHGKLQLGEQI 307
A +F M+ + P+ L S L C + G Q+
Sbjct: 334 ALIEFRKMMRDSVKPNSFTLSSALRGCSNLAMFEEGRQV 372
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 33/203 (16%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR++HG V K G ++ L+ELYGKCG A +FD + E DV++ MI Y
Sbjct: 368 EGRQVHGIVSKYGFDRDKYAGSGLIELYGKCGCSDMARLVFDTLSEV-DVISLNTMIYSY 426
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++G F R AL+LF M ++PN+VT++
Sbjct: 427 AQNG--------FGR-----------------------EALELFERMINLGLQPNDVTVL 455
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL AC+ G +E G + K +I L + +++M R G +++A + E+
Sbjct: 456 SVLLACNNSGLVEEGCELFDSFRKDKIMLTNDHYACMVDMLGRAGRLEEAEMLITEVTNP 515
Query: 181 DVTTYNSLIAGLAMHGRSIEAVE 203
D+ + +L++ +H R +E E
Sbjct: 516 DLVLWRTLLSACKVH-RKVEMAE 537
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/489 (39%), Positives = 282/489 (57%), Gaps = 34/489 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++HG VL+ G ++ S L++ YGKC + C++++
Sbjct: 228 GRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVG-----------CSEII---------- 266
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
FS + + V W +MI V+N E +A +F +++ + P + +
Sbjct: 267 -----------FSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSS 315
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLSAC+ L LE+G+ +H+ K + N VG AL++MY +CG I+ A + F+EM ER+
Sbjct: 316 VLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERN 375
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMI--NQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+ T+N++I G A G++ AV +F EM + + P VTFV VL+ACS G V++G EI
Sbjct: 376 LVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEI 435
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F+SM YGIEP EHY C+VDLL R G E+AY FI M I P + G+LL A K+ G
Sbjct: 436 FESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFG 495
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
K +LG+ A L + DSG +VLLSN +A++G+W+EA +R +MK+ G++K GCS I
Sbjct: 496 KSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWI 555
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
N +H F D H + +I + +L+ ++ GY P T L D+E+ EK +
Sbjct: 556 TAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWY 615
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE++A+ +GLIS IR+ KNLR+C DCHS IK I+ I R+IIVRD N FH F +
Sbjct: 616 HSEKIALAFGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRD 675
Query: 480 GTCSCGDYW 488
CSC DYW
Sbjct: 676 NQCSCRDYW 684
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 135/288 (46%), Gaps = 39/288 (13%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
++N Y + +A + S + V WTA+I G V+NG AL F M+RD+++PN
Sbjct: 48 LVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPN 107
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
+ T C A L + +G+ +H+ K + VG + +MYS+ G ++A ++F+
Sbjct: 108 DFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFD 167
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS------- 228
EM ER++ T+N+ ++ + GR +A+ F E ++G P +TF LNAC+
Sbjct: 168 EMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRL 227
Query: 229 ----HGGLVDLGFE----IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA------YD 274
HG ++ GFE + + YG + GC + S + +P +
Sbjct: 228 GRQLHGFVLQSGFEADVSVANGLIDFYG---KCHQVGCSEIIFSGISKPNDVSWCSMIVS 284
Query: 275 FITNMK---------------IAPDHIMLGSLLSACKIHGKLQLGEQI 307
++ N + I P M+ S+LSAC L++G+ +
Sbjct: 285 YVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSV 332
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/382 (20%), Positives = 151/382 (39%), Gaps = 71/382 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H +K G S+ ++Y K G ++A ++FDEMPE
Sbjct: 127 GKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPE--------------- 171
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ W A + V G AL F E + + PN +T
Sbjct: 172 -----------------RNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCA 214
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
L+AC+ L LGR +H ++ + + + V LI+ Y +C + + +F + + +
Sbjct: 215 FLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPN 274
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
++ S+I + +A +F +GI PT VL+AC+ ++++G +
Sbjct: 275 DVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSV-H 333
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA----------------------------- 272
++ + I +VD+ + G E+A
Sbjct: 334 TLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQAD 393
Query: 273 -----YDFIT--NMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT--YV 323
+D +T + ++AP+++ +LSAC G + +G +I + + + G Y
Sbjct: 394 MAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYA 453
Query: 324 LLSNAYASSGKWKEAVQIRAKM 345
+ + +G ++A Q KM
Sbjct: 454 CVVDLLGRAGMVEQAYQFIKKM 475
>gi|326532850|dbj|BAJ89270.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/493 (39%), Positives = 283/493 (57%), Gaps = 45/493 (9%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
++H VL+LG ++ L++ Y KC E A ++FDEM
Sbjct: 125 QLHALVLRLGCTADVRLITTLLDSYAKCDELASARKVFDEM------------------- 165
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD------NVRPNEV 117
V+D W A++ GL + E + AL LF + R PN V
Sbjct: 166 -------------TVRDVASWNALLAGLAQGTEPSLALALFHRLVRSFQELPPREAPNVV 212
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
TI+ LSAC+Q+G+L+ G +H + K + N V ALI+MYS+CG + +AL+VF +
Sbjct: 213 TIIAALSACAQIGSLQDGLCVHEFARKIGVGGNVRVCNALIDMYSKCGSLARALEVFHSI 272
Query: 178 KERDVT--TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
K D T +YN+ I ++MHG +A+++F EM I P +VT++ VL C+H GLVD
Sbjct: 273 KREDRTLVSYNTAIQAISMHGHGGDALKLFDEM-PTCIEPDEVTYIAVLCGCNHAGLVDE 331
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G +F M + P ++HYG +VDLL R GR EAYD I +M D ++ +LL A
Sbjct: 332 GLRVFHGMR----VPPNVKHYGTVVDLLGRAGRLAEAYDTIKSMPFPADIVLWQTLLGAS 387
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
K HG ++L E A +L + S G YVLLSN YAS +W + ++R M+ V+K PG
Sbjct: 388 KTHGDVELAEVAATKLTELGSNVDGDYVLLSNVYASKARWADVGRVRDTMRSNDVRKVPG 447
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
S E++ +H+FI GD HP+ ++IY+ + E+ + GY P T VLHDI + EK++
Sbjct: 448 FSYTEISGVMHKFINGDKEHPRLQEIYRALGEIMSRIGELGYEPETSNVLHDIGEEEKQY 507
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
AL+ HSE+LAI +GLI+T P T+RV+KN+R+C DCH + KLI+ R II+RDR RFH
Sbjct: 508 ALSYHSEKLAIAFGLIATPPGETLRVIKNIRICGDCHVVAKLISKAYGRAIIIRDRARFH 567
Query: 476 HFENGTCSCGDYW 488
FE+G CSC DYW
Sbjct: 568 RFEDGQCSCSDYW 580
>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Cucumis sativus]
Length = 598
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/487 (40%), Positives = 286/487 (58%), Gaps = 33/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H +K G + LV++Y KCGE DA LFDEMPE
Sbjct: 145 GKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPE--------------- 189
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ V W+ MI G + + AL LF++ ++V N+ T
Sbjct: 190 -----------------RNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSS 232
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V+ CS LELG+ IH K D + VG ALI++YS+CG I+ A QVF+E+ R+
Sbjct: 233 VIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRN 292
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ +NS++ A H + +F EM N G++P ++F+ VL ACSH GLV+ G E F
Sbjct: 293 LGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYF- 351
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
S+ RDYGIEP+ EHY +VDLL R G+ +EA I M + P + G+LL+ C+IH
Sbjct: 352 SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDT 411
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++ +A R+L+ S+ SG +VLLSNAYA++G+++EA ++R +++ GV+KE G S +E
Sbjct: 412 EMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEE 471
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N++H F GD H + +IY+K++EL++ ++ GY T VL ++ EK + HS
Sbjct: 472 GNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHS 531
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ERLAI +GLI+ P IRV+KNLRVC DCH+ IK ++ R +IVRD NRFH FE+G
Sbjct: 532 ERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGK 591
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 592 CSCGDYW 598
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 156/380 (41%), Gaps = 68/380 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G ++H +LK GL++ L+ LY K ++Q+FDE P+
Sbjct: 43 QGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPK-------------- 88
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
K + W+++I +N AL FR M D VRP++
Sbjct: 89 ------------------KSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYP 130
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
AC L ++G+ +H K + VG +L++MY++CG+I A +F+EM ER
Sbjct: 131 SATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPER 190
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+V +++ +I G A +EA+ +F++ + + + TF V+ CS ++LG ++
Sbjct: 191 NVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELG-KLI 249
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDF------------------------- 275
+ + ++ L S+ G E AY
Sbjct: 250 HGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHT 309
Query: 276 ---------ITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLL 325
+ N+ + P+ I S+L AC G ++ G + + D ++ Y L
Sbjct: 310 QRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASL 369
Query: 326 SNAYASSGKWKEAVQIRAKM 345
+ +GK +EAV + +M
Sbjct: 370 VDLLGRAGKLQEAVSVIKQM 389
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 68/130 (52%)
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
+ +++ N I +L + ++ +L G +H+++ K + +V LIN+YS+
Sbjct: 16 LNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQL 75
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+LQVF+E ++ TT++S+I+ A + + A++ FR M+N G+RP + A
Sbjct: 76 PLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKA 135
Query: 227 CSHGGLVDLG 236
C D+G
Sbjct: 136 CGFLRRSDVG 145
>gi|449446363|ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Cucumis sativus]
Length = 576
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/442 (41%), Positives = 286/442 (64%), Gaps = 4/442 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV+ T +++ Y + G ++ A ++F + D W A+I G + A A+ F+ M+
Sbjct: 137 DVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFAQGSRPADAIMTFKRMK 196
Query: 109 RD-NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
D N+RPN VT+ L ACSQLGAL+ G +H Y+ + +++ N V +I+MY++CG +
Sbjct: 197 VDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLNSNVQVCNVVIDMYAKCGSM 256
Query: 168 DKALQVFEEMK-ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
DKA VFE M+ ++ + T+N++I AMHG +A+++F ++ G+ P V+++ VL A
Sbjct: 257 DKAYWVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAVSYLAVLCA 316
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
C+H GLV+ G ++F SMT+ G+EP I+HYG +VDLL R GR +EAYD ++++ P+ +
Sbjct: 317 CNHAGLVEDGLKLFNSMTQR-GLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLPF-PNMV 374
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
+ +LL AC+ +G +++ E +++L++ G +VLLSN YA+ +W + ++R M+
Sbjct: 375 LWQTLLGACRTYGDVEMAELASRKLVEMGFISCGDFVLLSNVYAARQRWDDVGRVRDAMR 434
Query: 347 EAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH 406
V+K PG S IE+ ++++F+ GD H +IY K+ E+ +K GYS T VLH
Sbjct: 435 RRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLRIKAYGYSADTSNVLH 494
Query: 407 DIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKI 466
DI D +KE AL HSE+LA+ +GL T+ T I+V+KNLR+C DCH +IKLI+ I R+I
Sbjct: 495 DIGDEDKENALCYHSEKLAVAFGLTCTEEGTPIQVIKNLRICGDCHVVIKLISKIYIREI 554
Query: 467 IVRDRNRFHHFENGTCSCGDYW 488
IVRDR RFH F+ G CSC DYW
Sbjct: 555 IVRDRTRFHRFKEGLCSCKDYW 576
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 147/295 (49%), Gaps = 11/295 (3%)
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV--RPNEVTIVC 121
G + A +F + T W A+I G + + A A+ +R M N R + +T
Sbjct: 49 GDLSYALHIFRYIPYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALTCSF 108
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
L AC++ A +HS + + + + ++ L++ Y++ GD+D A ++F+EM + D
Sbjct: 109 ALKACARALARSEAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPD 168
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREM-INQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+ ++N+LIAG A R +A+ F+ M ++ +RP VT G L ACS G + G +
Sbjct: 169 IASWNALIAGFAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVH 228
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG- 299
+ + + + ++ ++D+ ++ G ++AY NM+ I +++ A +HG
Sbjct: 229 KYIVEE-KLNSNVQVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGD 287
Query: 300 ---KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
L L E++ + + S D+ +Y+ + A +G ++ +++ M + G++
Sbjct: 288 GHKALDLFEKLGRSGM---SPDAVSYLAVLCACNHAGLVEDGLKLFNSMTQRGLE 339
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 93/214 (43%), Gaps = 33/214 (15%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG +H +++ L SN ++++Y KCG A +F+ M ++ MI +
Sbjct: 223 EGESVHKYIVEEKLNSNVQVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAF 282
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG DG +ALDLF ++ R + P+ V+ +
Sbjct: 283 AMHG------------------------DG-------HKALDLFEKLGRSGMSPDAVSYL 311
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL AC+ G +E G + + M + ++ N G+++++ R G + +A + +
Sbjct: 312 AVLCACNHAGLVEDGLKLFNSMTQRGLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLPFP 371
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMF-REMINQGI 213
++ + +L+ +G +E E+ R+++ G
Sbjct: 372 NMVLWQTLLGACRTYG-DVEMAELASRKLVEMGF 404
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/441 (40%), Positives = 280/441 (63%), Gaps = 2/441 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
ND V + +I+ Y + G V +A ++F ++K K V W +MI G +NG A+ LF +M
Sbjct: 437 NDFVQNA-LIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQM 495
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ V+ +++T + V+ ACS LG LE G+W+H + + + + + AL +MYS+CG++
Sbjct: 496 YMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGEL 555
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A VF+ M ER + +++ +IAG MHG+ + +F +M+ GI+P +TF+ +L+AC
Sbjct: 556 QMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSAC 615
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SH G V+ G F SM+ ++G+EP+ +H+ C+VDLLSR G AY IT++ + +
Sbjct: 616 SHAGAVEEGKLYFNSMS-EFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSI 674
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
G+LL+ C+IH ++ + + I K LLD +AD+G Y LLSN YA G W + ++R+ MK
Sbjct: 675 WGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKS 734
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
G++K PG S+IE++ +I+ F GD H Q + IY+ ++ + +V + Y + +
Sbjct: 735 KGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPDNSIVG 794
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
+ KE + HSE+LAI +G+I+T+P TT+R+ KNLRVC DCHS K+ + IT R+II
Sbjct: 795 TSKFNKENNVVSHSEKLAIAFGIINTRPGTTLRISKNLRVCRDCHSFAKIASKITGREII 854
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
+RD NRFH F NG+CSC DYW
Sbjct: 855 MRDLNRFHCFRNGSCSCNDYW 875
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 161/335 (48%), Gaps = 36/335 (10%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D V T ++ Y E +++A + F + ++D V W++++ V+NG+ + LD+F +M
Sbjct: 133 SDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQM 192
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ V P+ VT++ V ACS+LG+L LGR +H Y+ + I+ N + +LI MY + GD+
Sbjct: 193 ISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDL 252
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A ++FE + R + +I+ G EA+ +F +M + P +VT VGVL AC
Sbjct: 253 YSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCAC 312
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYG------------------------------ 257
+ G V G + + R ++P+++ G
Sbjct: 313 ARLGRVKEGRSVHGFVIRR-AMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILS 371
Query: 258 --CIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
++ + +R G+PEEA M+ + PD L S LSAC QLG QI ++
Sbjct: 372 WNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYII 431
Query: 313 DCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+ + L + YA G A ++ K+KE
Sbjct: 432 KTGNFNDFVQNALIDMYAKCGFVHSANKMFEKIKE 466
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 188/426 (44%), Gaps = 80/426 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGE---------------------------- 33
GR +HG V++ + SN S L+ +YGK G+
Sbjct: 220 GRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQ 279
Query: 34 ---FKDAMQLFDEMPEC----NDVVASTVMINC--------------------------- 59
F++A+ +F +M E N V V+ C
Sbjct: 280 SGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDF 339
Query: 60 --------YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN 111
Y + G + + +VF +K K + W +I RNG+ AL LF +MQ
Sbjct: 340 LGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQG 399
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
+ P+ ++ LSAC + +LG IH Y+ K + N V ALI+MY++CG + A
Sbjct: 400 LMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG-NFNDFVQNALIDMYAKCGFVHSAN 458
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
++FE++KE+ + T+NS+I G + +G S+EA+ +F +M ++ K+TF+ V+ ACSH G
Sbjct: 459 KMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLG 518
Query: 232 LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIML 288
++ G + + YG+ + D+ S+ G + A +D ++ I +M+
Sbjct: 519 YLEKGKWVHHKLIM-YGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMI 577
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+HG++ + ++L + T++ + +A + +G +E M E
Sbjct: 578 AGY----GMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSE 633
Query: 348 AGVQKE 353
GV+ +
Sbjct: 634 FGVEPK 639
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 148/336 (44%), Gaps = 38/336 (11%)
Query: 52 ASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-QRD 110
AST +I Y + G+ E++ VF D+ W +I V G A+ L+ EM +D
Sbjct: 35 ASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQD 94
Query: 111 NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
+ + VL ACS G L +G +H + K + + +V +L+ MY +D A
Sbjct: 95 QTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDA 154
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
+ F+ M RDV ++S++ +G++ E ++MF +MI++ + P VT + V ACS
Sbjct: 155 CKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSEL 214
Query: 231 GLVDLGFEIFQSMTRD----------------------YGIEPQIEHYGC--------IV 260
G + LG + + R Y E E+ C ++
Sbjct: 215 GSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMI 274
Query: 261 DLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSA 317
++ G +EA + M K+ P+ + + +L AC G+++ G + ++ R+
Sbjct: 275 SCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIR-RAM 333
Query: 318 DSGTYVL---LSNAYASSGKWKEAVQIRAKMKEAGV 350
D L L YA +G ++ ++ +KE +
Sbjct: 334 DPELDFLGPALMELYADTGNLRDCHKVFETIKEKTI 369
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 33/198 (16%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ +H +++ GLR + L ++Y KCGE + A +FD M E +V+ +VMI Y
Sbjct: 522 KGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSE-RSIVSWSVMIAGY 580
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
H G++ + LF +M ++PN++T +
Sbjct: 581 GMH-------------------------------GQINATISLFNQMLGSGIKPNDITFM 609
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
+LSACS GA+E G+ + M + ++ H ++++ SR GD++ A Q+ +
Sbjct: 610 HILSACSHAGAVEEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFP 669
Query: 180 RDVTTYNSLIAGLAMHGR 197
+ + + +L+ G +H R
Sbjct: 670 ANSSIWGALLNGCRIHKR 687
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 171/419 (40%), Positives = 274/419 (65%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV + +I+ Y + V+++ VF + D + W ++I G V+NG L F++M
Sbjct: 230 DVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQML 289
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
++PN V+ ++ AC+ L L LG+ +H Y+ + R D N + AL++MY++CG+I
Sbjct: 290 IAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIR 349
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +F++M+ D+ ++ ++I G A+HG + +A+ +F+ M +G++P V F+ VL ACS
Sbjct: 350 TARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACS 409
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLVD ++ F SMT+DY I P +EHY + DLL RVGR EEAY+FI++M I P +
Sbjct: 410 HAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVW 469
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+LL+AC++H ++L E+++K+L + G YVLLSN Y+++G+WK+A ++R M++
Sbjct: 470 STLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDK 529
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
G++K+P CS IE+ N++H F+ GD HP ++I + ++ L + ++ EGY T VLHD+
Sbjct: 530 GMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDV 589
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
E+ +K + L HSERLAI +G+IST TTIRV KNLRVC DCH+ K I+ I R+I+
Sbjct: 590 EEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISKIVGREIV 648
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 123/241 (51%), Gaps = 2/241 (0%)
Query: 71 EVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLG 130
+VF + +D V W +I G +NG AL + REM ++RP+ T+ VL ++
Sbjct: 151 KVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYV 210
Query: 131 ALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIA 190
L G+ IH Y ++ D + +G +LI+MY++C +D + +VF + + D ++NS+IA
Sbjct: 211 NLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIA 270
Query: 191 GLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIE 250
G +G E ++ F++M+ I+P V+F ++ AC+H + LG ++ + R +
Sbjct: 271 GCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSR-FD 329
Query: 251 PQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKR 310
+ +VD+ ++ G A M++ D + +++ +HG + KR
Sbjct: 330 GNVFIASALVDMYAKCGNIRTARWIFDKMELY-DMVSWTAMIMGYALHGHAYDAISLFKR 388
Query: 311 L 311
+
Sbjct: 389 M 389
>gi|302765332|ref|XP_002966087.1| hypothetical protein SELMODRAFT_84768 [Selaginella moellendorffii]
gi|300166901|gb|EFJ33507.1| hypothetical protein SELMODRAFT_84768 [Selaginella moellendorffii]
Length = 449
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/441 (39%), Positives = 276/441 (62%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
++ + ++N YV G +E A +VF + D WT MI N E+ AL+LF M
Sbjct: 9 SNAILENALLNMYVRCGSLEEARKVFDAMDHPDAFSWTNMITACTENCELLEALELFHRM 68
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ + P VT+ VL+AC+ GAL++G+ IHS + + + AL++MY++CG +
Sbjct: 69 NLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSL 128
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+ + +VF M+ R+ ++ ++IA LA HG+ EA+E+F+EM +G+ TF+ VL AC
Sbjct: 129 ECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRAC 188
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SH GL+ E F SM DY I P HY +D + R GR ++A + I +M P+ +
Sbjct: 189 SHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETVT 248
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+LL+AC+IH + + ++A+ L DS Y LL N YA++ ++ + +++R M +
Sbjct: 249 WKTLLNACRIHSQAERATKVAELLAKLAPEDSMAYTLLGNVYAATERYGDQMRVRKSMTD 308
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
G++K PG S IEV N++HEF+ GD HP R++I ++++L ++ GY P+T+ VLH
Sbjct: 309 RGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKDVLHA 368
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
+ + EKE + +HSE+LAI +GLI+T P T + +VKNLRVC+DCH+ K+IA I +R+I+
Sbjct: 369 VNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRRIV 428
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
VRD +RFHHFE+G CSC DYW
Sbjct: 429 VRDTHRFHHFEDGQCSCKDYW 449
>gi|387169573|gb|AFJ66232.1| hypothetical protein 34G24.32 [Capsella rubella]
Length = 598
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/487 (39%), Positives = 295/487 (60%), Gaps = 5/487 (1%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVAST-VMINCYVE 62
+ H QV KLG + S + +V Y +C A +L + V++T ++I ++
Sbjct: 115 QAHAQVFKLGYGTYPSLLVSMVAAYRRCNLSYFARRLLLWFLSLSPGVSNTNIIIESLMK 174
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPNEVTIVC 121
G A +V R ++ + W MI G VRN + AL + M +++PN+ +
Sbjct: 175 TGEYGLAKKVLRRASDQNVITWNLMIGGYVRNVQYEEALKTLKNMLSFSDIKPNKFSFAS 234
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
L+AC++LG L +W+HS M I+LN I+ AL+++Y++CGDI+ + +VF +K D
Sbjct: 235 ALAACARLGDLHHAKWVHSLMIDAGIELNTILSSALVDVYAKCGDIETSREVFYSVKWND 294
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V+ +N++I G A HG + EA+ +F EM + + P +TF+G+L ACSH GL++ G E F
Sbjct: 295 VSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGILTACSHCGLLEEGKEFFG 354
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M++ + I+P++EHYG +VDLL R G+ +EAYD I +M I PD ++ SLLS+ + +
Sbjct: 355 LMSQRFSIQPKLEHYGAMVDLLGRAGQVKEAYDLIESMPIEPDVVIWRSLLSSARTYKNP 414
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LGE + L A SG YVLLSN Y+S+ KW+ A ++R M + G++K G S +E
Sbjct: 415 ELGEIAIQNL---SKAKSGDYVLLSNIYSSTKKWENAQKVRELMTKEGIRKAKGKSWVEF 471
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
IH F GD H + IYK ++ L Q K EG+ T++VL D+ + EKE L HS
Sbjct: 472 GGVIHRFKAGDTSHIDTKAIYKVLEGLIQKAKSEGFVSDTDLVLMDVSEEEKEENLNYHS 531
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ Y ++ + P + IR+ KN+R+C+DCH+ IK ++ + R II+RDR RFH FE+G
Sbjct: 532 EKLALAYVILKSSPGSEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGL 591
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 592 CSCKDYW 598
>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
Length = 640
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/441 (42%), Positives = 276/441 (62%), Gaps = 1/441 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV +I+ Y + G V+ A+ VF V+D V W +MI +NG A AL L R M
Sbjct: 200 DVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQNGRPAEALALCRNMA 259
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ + P VT+V +SA + GAL GR +H Y + + +L++MY++ G +
Sbjct: 260 AEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVT 319
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNAC 227
A +F+++ R++ ++N++I G MHG + A E+FR M N+ + P +TFVGVL+AC
Sbjct: 320 VARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRNEAQVMPDHITFVGVLSAC 379
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
+HGG+V E+F M Y I+P ++HY C+VD+L GR +EA D I M + PD +
Sbjct: 380 NHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGI 439
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
G+LL+ CKIH ++L E +L++ D+G YVLLSN YA SGKW+EA ++R M
Sbjct: 440 WGALLNGCKIHKNVELAELALHKLIELEPEDAGNYVLLSNIYAQSGKWEEAARVRKLMTN 499
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
G++K CS IE+ + H F++GD HP+ ++IY++++ L+ ++ GY P T V H+
Sbjct: 500 RGLKKIIACSWIELKGKSHGFLVGDASHPRSDEIYEELERLEGLISQTGYVPDTTSVFHN 559
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
+ED EK + HSERLAI +GLIST P T + V KNLRVC DCH +IKLI+ I +R+II
Sbjct: 560 VEDDEKRNMVRGHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLISQIEQREII 619
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
+RD NR+HHF NG CSC D+W
Sbjct: 620 IRDVNRYHHFVNGECSCKDHW 640
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 97/190 (51%), Gaps = 8/190 (4%)
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
N +L +C A+ GR +H+ + + L+ ++ L+++Y+ CG + A ++F
Sbjct: 62 NHNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLF 121
Query: 175 EEMKER-DVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSHGGL 232
+EM + +V +N LI A G A+E++REM+ G + P T+ VL AC+ L
Sbjct: 122 DEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACA--AL 179
Query: 233 VDLGF--EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGS 290
+DLG E+ + R G ++D+ ++ G +EA+ + + D ++ S
Sbjct: 180 LDLGAGREVHDRVMRTSWAADVFVCAG-LIDMYAKCGCVDEAWAVFDSTTVR-DAVVWNS 237
Query: 291 LLSACKIHGK 300
+++AC +G+
Sbjct: 238 MIAACGQNGR 247
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 116/277 (41%), Gaps = 21/277 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GRE+HG + G S + L+++Y K G A LFD++ ++++ MI +
Sbjct: 286 GRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFH-RELISWNAMICGFG 344
Query: 62 EHGLVENAFEVFSRVK-----VKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPN 115
HG ++A E+F R++ + D + + ++ G + A ++F M +++P
Sbjct: 345 MHGHADHACELFRRMRNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPM 404
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALIN---MYSRCGDIDKALQ 172
C++ G + + M + + + GAL+N ++ + AL
Sbjct: 405 VQHYTCLVDVLGHSGRFKEASDVIKGM---LVKPDSGIWGALLNGCKIHKNVELAELALH 461
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
E++ D Y L A G+ EA + + M N+G++ L SHG L
Sbjct: 462 KLIELEPEDAGNYVLLSNIYAQSGKWEEAARVRKLMTNRGLKKIIACSWIELKGKSHGFL 521
Query: 233 V-----DLGFEIFQSMTRDYGIEPQIEHYGCIVDLLS 264
V EI++ + R +E I G + D S
Sbjct: 522 VGDASHPRSDEIYEELER---LEGLISQTGYVPDTTS 555
>gi|357119982|ref|XP_003561711.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g50990-like [Brachypodium distachyon]
Length = 555
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/486 (39%), Positives = 296/486 (60%), Gaps = 4/486 (0%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPE-CNDVVASTVMINCYVE 62
+IH ++ K+GL N+ L+ LY +A +LF M E D +M+ +++
Sbjct: 73 QIHSRLTKVGLLRNQHIIAPLLRLYIDYDCMTEARELFWLMLEWSTDPFHGNLMLTGFLK 132
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
G ++ A+++F R+ VKD V W +MI G VR+ + A+ LF + + P+ + V
Sbjct: 133 GGQLDKAYQIFKRMPVKDVVSWNSMIAGAVRSSHLKDAMILFSRLVNSGLVPDGFSFSSV 192
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
LSAC++ GAL G W+H M + ++ N+I+ AL++MY++CG ID ++++F +K V
Sbjct: 193 LSACARAGALFYGVWVHRLMAELGVEKNNILISALVDMYAKCGRIDVSVEIFNTVKRNHV 252
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
+N++I LA HG + V +F M + G+ P VTFV +L ACSH G+V+ + F++
Sbjct: 253 PMWNTMIGSLAAHGLGQDVVVLFHRMEHAGVVPDGVTFVALLTACSHCGMVEEARQYFEA 312
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
MT Y I P++EHYG +VD LSR G +EAY+ + +M + PD ++ +LLSAC+ H + +
Sbjct: 313 MTTKYYITPKVEHYGAMVDTLSRAGLLDEAYNLVRSMVVKPDAVIWRALLSACRRHHQTK 372
Query: 303 LGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVN 362
LGE ++++ C+ SG Y LLSN Y+S +W ++ + + K+ V+K G S +E+
Sbjct: 373 LGEITIEQMV-CQG--SGDYTLLSNIYSSINRWVDSENVWKERKKKKVRKNKGLSWVELG 429
Query: 363 NEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSE 422
HEF GD HP + IY+ + L + K EGYSPSTE+V+ D+ E+E L HSE
Sbjct: 430 GSTHEFKAGDRSHPDTDDIYRVLHGLSKKAKAEGYSPSTELVMKDVSHEEREENLTFHSE 489
Query: 423 RLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTC 482
+LA+ Y ++ T P T I V KNL+ C DCH IK+I+ + R II+RDR RFH FE+G C
Sbjct: 490 KLAVAYSVLKTGPGTEIMVSKNLQTCGDCHEWIKIISKVLCRVIIMRDRARFHRFESGCC 549
Query: 483 SCGDYW 488
SC DYW
Sbjct: 550 SCKDYW 555
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/487 (39%), Positives = 283/487 (58%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H Q+LK + + ++++YGKCG FD
Sbjct: 243 GKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFD------------------- 283
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
R++ ++ V WT++I +N AL+LF +M+ D + PNE T+
Sbjct: 284 -------------RLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAV 330
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+ ++ + L AL LG +H+ K + N +VG ALI MY + GDI A VF M +
Sbjct: 331 LFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCN 390
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ T+N++I G + HG EA+ MF++M+ G RP VTF+GV+ AC+H LVD GF F
Sbjct: 391 IITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFN 450
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+ + + I P +EHY CIV LLSR GR +EA +F+ + +I D + +LL+AC +H
Sbjct: 451 HLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLLNACYVHKHY 510
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
G +IA+ LL D GTY+LLSN +A +W V+IR M+E V+KEPG S +E+
Sbjct: 511 DKGRKIAEYLLQLEPRDVGTYILLSNMHARVRRWDHVVEIRKLMRERNVKKEPGVSWLEI 570
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N H F DI+HP+ IY+ +++L ++ GY P + VLHDIED +K L+ HS
Sbjct: 571 RNVAHVFTSEDIKHPEANLIYENVKDLLSKIRPLGYVPDIDNVLHDIEDEQKVDNLSYHS 630
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ YGL+ T I V+KNLR+C+DCH+ IKLI+ + R I+VRD NRFHHF+NG
Sbjct: 631 EKLAVAYGLMKTPSGAPITVIKNLRMCDDCHTAIKLISKVANRVIVVRDANRFHHFQNGC 690
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 691 CSCGDYW 697
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 160/355 (45%), Gaps = 40/355 (11%)
Query: 2 GREIHGQ--VLKLGLRSNRSTRLK-LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMIN 58
GR IH + R ++ +L L+ LY KC E A +LFD MP
Sbjct: 38 GRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMPR------------ 85
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ-RDNVRPNEV 117
++ V W+A++ G ++NG +LF++M +DN+ PNE
Sbjct: 86 --------------------RNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEY 125
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
I +S+C +E G+ H Y K ++ + V ALI +YS+C D+ A+Q+ +
Sbjct: 126 VIATAISSCDSQMYVE-GKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTV 184
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
D+ YN ++ GL H EAV++ + +I++GI T+V + C+ + LG
Sbjct: 185 PGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGK 244
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
++ M + I+ + I+D+ + G F ++ + + + S+++A
Sbjct: 245 QVHAQMLKS-DIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQ-SRNVVSWTSIIAAYFQ 302
Query: 298 HGKLQLGEQIAKRL-LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
+ + + ++ +DC + T +L N+ A Q+ A+ +++G++
Sbjct: 303 NEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLK 357
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 109/228 (47%), Gaps = 32/228 (14%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG++ HG LK GL ++ + L++LY KC + A+Q+ +P
Sbjct: 141 EGKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPG-------------- 186
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
D C+ +++GL+++ MA A+D+ + + + + N T V
Sbjct: 187 ------------------NDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYV 228
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+ C+ L + LG+ +H+ M K ID + +G ++I+MY +CG++ F+ ++ R
Sbjct: 229 TIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSR 288
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+V ++ S+IA + EA+ +F +M I P + T + N+ +
Sbjct: 289 NVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAA 336
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 40/229 (17%)
Query: 122 VLSACSQLGALELGRWIHSYMG--KHRI---DLNHIVGGALINMYSRCGDIDKALQVFEE 176
+L + L+ GR IH+++ H +N + +LIN+Y +C ++ A ++F+
Sbjct: 25 LLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQL--NSLINLYVKCDEVSIARKLFDS 82
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREM-INQGIRPTKVTFVGVLNACS------- 228
M R+V ++++L+AG +G +E E+F++M + I P + +++C
Sbjct: 83 MPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYVEG 142
Query: 229 ---HGGLVDLGFEIFQ----------SMTRDYGIEPQIEH---------YGCIVDLLSRV 266
HG + G E Q S D G QI + Y +V+ L +
Sbjct: 143 KQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQH 202
Query: 267 GRPEEAYD---FITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
EA D I + I ++ ++ C + LG+Q+ ++L
Sbjct: 203 THMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQML 251
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/492 (38%), Positives = 293/492 (59%), Gaps = 21/492 (4%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H LK G L+ LY KCG+ ++A +F M E D+V+ T MI Y
Sbjct: 390 GRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSE-RDIVSWTSMITAYS 448
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPNEVTIV 120
+ G + A E F + ++ + W AM+ +++G L ++ M + +V P+ VT V
Sbjct: 449 QIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYV 508
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+ C+ +GA +LG I + K + LN V A I MYS+CG I +A ++F+ + +
Sbjct: 509 TLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGK 568
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++N++I G + HG +A + F +M+++G +P +++V VL+ CSH GLV G F
Sbjct: 569 DVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYF 628
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
MTR +GI P +EH+ C+VDLL R G EA D I M + P + G+LLSACKIHG
Sbjct: 629 DMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGN 688
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+L E AK + + S DSG+Y+LL+ Y+ +GK ++ Q+R M++ G++K PG S +E
Sbjct: 689 DELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWME 748
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGY----SPSTEVVLHDIEDWEKEWA 416
V N++H F D+ HPQ I K+ EL + + GY SP +E+ H
Sbjct: 749 VENKVHVFKADDVSHPQVIAIRNKLDELMEKIAHLGYVRTESPRSEI--H---------- 796
Query: 417 LAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHH 476
HSE+LA+ +G++S + I ++KNLR+C DCH++IKLI+++T R+ ++RD RFHH
Sbjct: 797 ---HSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHH 853
Query: 477 FENGTCSCGDYW 488
F++G+CSCGDYW
Sbjct: 854 FKSGSCSCGDYW 865
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 172/418 (41%), Gaps = 78/418 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
R +HG+++ +GL S + L+ Y CG DA +L + +V+ +M+N Y
Sbjct: 23 ARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPNVITHNIMMNGYA 82
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTIV 120
+ G + +A E+F R+ +D W ++ G + L+ F M R + PN T
Sbjct: 83 KQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFC 142
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG--------------- 165
CV+ +C LG EL + K + V AL++M+ RCG
Sbjct: 143 CVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERP 202
Query: 166 ----------------DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
ID A++ FE+M ERDV ++N +IA L+ GR EA+ + EM
Sbjct: 203 TIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMH 262
Query: 210 NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHY--GCIVDLLSRVG 267
+G+R T+ L AC+ + G ++ + R PQI+ Y +++L ++ G
Sbjct: 263 RKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSL---PQIDPYVASALIELYAKCG 319
Query: 268 RPEEAYDFITNMK----------------------------------IAPDHIMLGSLLS 293
+EA +++ +A D L +L+S
Sbjct: 320 SFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLIS 379
Query: 294 ACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNA----YASSGKWKEAVQIRAKMKE 347
C L LG Q+ C + +++SN+ YA G + A + + M E
Sbjct: 380 GCFNRMDLCLGRQLHSL---CLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSE 434
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 167/351 (47%), Gaps = 18/351 (5%)
Query: 3 REIHGQVL----KLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMIN 58
RE+ Q+L K + LV+++ +CG A +LF ++ E + M+
Sbjct: 154 RELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQI-ERPTIFCRNSMLA 212
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVT 118
Y + +++A E F + +D V W MI L ++G + AL L EM R VR + T
Sbjct: 213 GYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTT 272
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
L+AC++L +L G+ +H+ + + ++ V ALI +Y++CG +A +VF ++
Sbjct: 273 YTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQ 332
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
+R+ ++ LI G + ++VE+F +M + + + +++ C + + LG +
Sbjct: 333 DRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQ 392
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
+ S+ G I ++ L ++ G + A +F+ + D + S+++A
Sbjct: 393 L-HSLCLKSGHNRAIVVSNSLISLYAKCGDLQNA-EFVFSSMSERDIVSWTSMITAYS-- 448
Query: 299 GKLQLGEQIAKRL----LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
Q+G I R +D R+A T+ + AY G ++ +++ + M
Sbjct: 449 ---QIGNIIKAREFFDGMDTRNAI--TWNAMLGAYIQHGAEEDGLKMYSAM 494
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 152/332 (45%), Gaps = 42/332 (12%)
Query: 43 EMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALD 102
+P+ + VAS +I Y + G + A VF+ ++ +++V WT +I G ++ +++++
Sbjct: 299 SLPQIDPYVASA-LIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVE 357
Query: 103 LFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYS 162
LF +M+ + + ++ + ++S C L LGR +HS K + +V +LI++Y+
Sbjct: 358 LFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYA 417
Query: 163 RCGDIDKALQVFEEMKERDVT-------------------------------TYNSLIAG 191
+CGD+ A VF M ERD+ T+N+++
Sbjct: 418 KCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGA 477
Query: 192 LAMHGRSIEAVEMFREMINQ-GIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIE 250
HG + ++M+ M++Q + P VT+V + C+ G LG +I T G+
Sbjct: 478 YIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQII-GHTVKAGLI 536
Query: 251 PQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKR 310
+ + + S+ GR EA ++ D + ++++ HG +G+Q AK
Sbjct: 537 LNVSVANAAITMYSKCGRISEAQKLF-DLLNGKDVVSWNAMITGYSQHG---MGKQAAKT 592
Query: 311 LLDCRS----ADSGTYVLLSNAYASSGKWKEA 338
D S D +YV + + + SG +E
Sbjct: 593 FDDMLSKGAKPDYISYVAVLSGCSHSGLVQEG 624
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 124/263 (47%), Gaps = 23/263 (8%)
Query: 150 NHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
N I ++N Y++ G + A ++F+ M RDV ++N+L++G R ++ +E F M
Sbjct: 70 NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129
Query: 210 NQGIR-PTKVTFVGVLNACSHGGLVDLGFEIFQSMTR-DYGIEPQIEHYGCIVDLLSRVG 267
G P TF V+ +C G +L ++ + D+ +P +E +VD+ R G
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVE--TALVDMFVRCG 187
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSA-CKIHG---KLQLGEQIAKRLLDCRSADSGTYV 323
+ A + ++ P S+L+ K++G ++ E +A+R D ++
Sbjct: 188 YVDFASRLFSQIE-RPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAER-------DVVSWN 239
Query: 324 LLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYK 383
++ A + SG+ +EA+ + +M GV+ + + + F LG +Q++
Sbjct: 240 MMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLG-----WGKQLHA 294
Query: 384 KMQELKQIVKLEGYSPSTEVVLH 406
K+ ++ + +++ Y S + L+
Sbjct: 295 KV--IRSLPQIDPYVASALIELY 315
>gi|222632633|gb|EEE64765.1| hypothetical protein OsJ_19621 [Oryza sativa Japonica Group]
Length = 656
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/491 (41%), Positives = 288/491 (58%), Gaps = 40/491 (8%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++H Q LK L N LV++YGKC +A ++F+ +PE
Sbjct: 202 GSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPE--------------- 246
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K+ V WTA++ +N AL LF +M+ + VRPNE T
Sbjct: 247 -----------------KNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAV 289
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNH----IVGGALINMYSRCGDIDKALQVFEEM 177
L++C+ L L+ G + +G + H V AL+NMYS+ G ++ A +VF M
Sbjct: 290 ALNSCAGLATLKNG----NALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSM 345
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
RDV ++NS+I G A HGR+ EA+E F +M+ P+ VTF+GVL+AC+ GLVD GF
Sbjct: 346 PCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGF 405
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
M ++ G++P EHY C+V LL RVGR +EA FI + I D + SLLS+C++
Sbjct: 406 YYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQV 465
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
+ LG ++A+++ + D GTYVLLSN YA + +W V++R M+E GV+KEPG S
Sbjct: 466 YRNYGLGHRVAEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVS 525
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
I+V +E+H F D +HP EQI KK+QEL +K+ GY P+ V LHD+ED +KE L
Sbjct: 526 WIQVGSEVHVFTSEDKKHPYMEQITKKLQELIDKIKVIGYVPNIAVALHDVEDEQKEEHL 585
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LA+ +GLI T IR++KN+R+C+DCH IKLI+ T R+I+VRD RFH
Sbjct: 586 MYHSEKLALAFGLIRTPKGEAIRIMKNVRICDDCHVAIKLISLATGRRIVVRDTVRFHCI 645
Query: 478 ENGTCSCGDYW 488
E+G CSC DYW
Sbjct: 646 EDGVCSCDDYW 656
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 173/398 (43%), Gaps = 56/398 (14%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H +V++ R + L+ LY KCG A Q+FD MP N V + ++++ Y
Sbjct: 35 GKAVHARVVRAA-RFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPV-SGNLLMSGYA 92
Query: 62 EHG-------------------LVENAFEVFSRVKVKDT------------------VCW 84
G ++ +A + V+ D VC
Sbjct: 93 SSGRHRDALALLRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVC- 151
Query: 85 TAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC-VLSACSQLGALELGRWIHSYMG 143
+A++ + M A+ + + + R ++C VL C+ + LG +H+
Sbjct: 152 SAVLHMYCQCAHMDEAVK-YSKKHGEKCRAMGSCVICRVLGHCASTKEVVLGSQVHTQAL 210
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
K R++LN VG AL++MY +C +A +VFE + E+++ ++ +++ + +A++
Sbjct: 211 KRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQ 270
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDL----GFEIFQSMTRDYGIEPQIEHYGCI 259
+F +M +G+RP + T+ LN+C+ GL L T +G+ P +
Sbjct: 271 LFLDMEMEGVRPNEFTYAVALNSCA--GLATLKNGNALGACTMKTGHWGLLPVCN---AL 325
Query: 260 VDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADS 319
+++ S+ G E+A +M D + S++ HG+ + + +L S
Sbjct: 326 MNMYSKSGSVEDARRVFLSMP-CRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPS 384
Query: 320 G-TYVLLSNAYASSGKWKEAV-QIRAKMKEAGVQKEPG 355
T++ + +A A G E + MKE GV+ PG
Sbjct: 385 YVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVK--PG 420
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 130 GALELGRWIHSYMGKH-RIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
G L LG+ +H+ + + R D+ + LI +Y +CG + A QVF+ M R+ + N L
Sbjct: 30 GELSLGKAVHARVVRAARFDV--VQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLL 87
Query: 189 IAGLAMHGRSIEAVEMFR 206
++G A GR +A+ + R
Sbjct: 88 MSGYASSGRHRDALALLR 105
>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 676
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/488 (39%), Positives = 288/488 (59%), Gaps = 34/488 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ IHG V+K GL S +++ L+ +Y KC
Sbjct: 222 GKLIHGLVVKSGLESVVASQTSLLTMYSKCN----------------------------- 252
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+VE++ +VF+ + V WT+ I GLV+NG AL +FREM R ++ PN T
Sbjct: 253 ---MVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSS 309
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L ACS L LE G IH+ K +D N V ALI++Y +CG+++KA VFE + E D
Sbjct: 310 ILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELD 369
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V + N++I A +G EA+E+F M G +P VTF+ +L AC++ GLV+ G +IF
Sbjct: 370 VVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFS 429
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+ ++ IE +HY C++DLL R R EEA I K PD I +LL+ACKIHG++
Sbjct: 430 LIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGK-NPDVIQWRTLLNACKIHGEV 488
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++ E+ K++LD D GT++LL+N YAS+GKW +++++ ++ ++K P S +++
Sbjct: 489 EMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDI 548
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ E+H F+ GD+ HP+ +I + + EL + V GY+P T+ VL D+E+ +K AL HS
Sbjct: 549 DREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHS 608
Query: 422 ERLAICYGLIST-KPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
E+LAI + L T T IR+ KNLRVC DCHS IK ++ +T R II RD RFHHF+ G
Sbjct: 609 EKLAIAFALWKTCGKNTAIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARDAKRFHHFKGG 668
Query: 481 TCSCGDYW 488
CSC DYW
Sbjct: 669 ICSCKDYW 676
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 140/267 (52%), Gaps = 4/267 (1%)
Query: 46 ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
E +D +T +++ Y + G +++A VF RV KD V +TA+I G + G AL++F
Sbjct: 133 EVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFE 192
Query: 106 EMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG 165
+M ++PNE T+ VL +C LG L G+ IH + K ++ +L+ MYS+C
Sbjct: 193 DMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCN 252
Query: 166 DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
++ +++VF + T+ S I GL +GR A+ MFREMI I P TF +L+
Sbjct: 253 MVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILH 312
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIA 282
ACS +++ G +I ++T G++ ++ L + G E+A ++ +T + +
Sbjct: 313 ACSSLAMLEAGEQI-HAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVV 371
Query: 283 PDHIMLGSLLSACKIHGKLQLGEQIAK 309
+ M+ + H L+L E++ K
Sbjct: 372 SINTMIYAYAQNGFGHEALELFERMKK 398
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 169/423 (39%), Gaps = 81/423 (19%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
+ +H +LK G + KL++ Y KC +A +LFDEMP
Sbjct: 21 KSLHTHILKSGSLFSFFGH-KLIDGYIKCSVITEARKLFDEMPN---------------- 63
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
+ V W +MI V G+ A++L+ M + V P+ T +
Sbjct: 64 ----------------RHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAI 107
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNH-IVGGALINMYSRCGDIDKALQVFEEMKERD 181
A S++G G+ H +++ V +++MY++ G + A VF+ + ++D
Sbjct: 108 FKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKD 167
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HG 230
V + +LI G G EA+E+F +M+ I+P + T VL +C HG
Sbjct: 168 VVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHG 227
Query: 231 GLVDLGFE--------IFQSMTRDYGIEPQIEHYGC------------IVDLLSRVGRPE 270
+V G E + ++ +E I+ + IV L+ GR E
Sbjct: 228 LVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQN-GREE 286
Query: 271 EAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV--LL 325
A M I+P+H S+L AC L+ GEQI + D YV L
Sbjct: 287 IALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKL-GVDGNKYVDAAL 345
Query: 326 SNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKM 385
+ Y G ++A + + E V + +N I+ + H E ++++M
Sbjct: 346 IHLYGKCGNVEKARSVFESLTELDV--------VSINTMIYAYAQNGFGHEALE-LFERM 396
Query: 386 QEL 388
++L
Sbjct: 397 KKL 399
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/487 (37%), Positives = 280/487 (57%), Gaps = 31/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H V+KLG S+ L ++Y K G+ + A +F EC +VV+
Sbjct: 161 GRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVS--------- 211
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+T +IDG V ++ + L +F E++R + PNE T
Sbjct: 212 ----------------------YTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSS 249
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
++ AC+ ALE G +H+ + K D + V L++MY +CG +++A+Q F+E+ +
Sbjct: 250 LIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPT 309
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+NSL++ HG +A+++F M+++G++P +TF+ +L CSH GLV+ G + F
Sbjct: 310 EIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFY 369
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM + YG+ P EHY C++DLL R GR +EA +FI M P+ S L AC+IHG
Sbjct: 370 SMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDK 429
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++G+ A++L+ +SG VLLSN YA+ +W++ +R +M++ V+K PG S ++V
Sbjct: 430 EMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDV 489
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ H F D HP++ IY+K+ L +K GY P T+ V D++D KE L HS
Sbjct: 490 GYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHS 549
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ER+A+ + LIS I V KNLRVC DCHS IK I+ +T RKIIVRD +RFHHF +G+
Sbjct: 550 ERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGS 609
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 610 CSCGDYW 616
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 151/317 (47%), Gaps = 43/317 (13%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H LK G+ S L ++Y KCG DA ++F+EMP
Sbjct: 60 GKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP---------------- 103
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
KD V WTAMIDG + GE AL F++M + V ++ +
Sbjct: 104 ----------------CKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCS 147
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE-R 180
L AC L A + GR +HS + K + + VG AL +MYS+ GD++ A VF E R
Sbjct: 148 TLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECR 207
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+V +Y LI G + + + +F E+ QGI P + TF ++ AC++ ++ G ++
Sbjct: 208 NVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLH 267
Query: 241 -QSMTRDYGIEPQIEHYGCIVDLLSRVGRPE---EAYDFITNMKIAPDHIMLGSLLSACK 296
Q M ++ +P + +VD+ + G E +A+D I + P I SL+S
Sbjct: 268 AQVMKINFDEDPFVSSI--LVDMYGKCGLLEQAIQAFDEIGD----PTEIAWNSLVSVFG 321
Query: 297 IHGKLQLGEQIAKRLLD 313
HG + +I +R++D
Sbjct: 322 QHGLGKDAIKIFERMVD 338
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 35/297 (11%)
Query: 79 KDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWI 138
++ V WTAMI GL +N + + A+ F M+ P + + AC+ LG++E+G+ +
Sbjct: 4 RNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQM 63
Query: 139 HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRS 198
H K I VG L +MYS+CG + A +VFEEM +D ++ ++I G + G
Sbjct: 64 HCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEF 123
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HGGLVDLGFE--IF----- 240
EA+ F++MI++ + + L AC H +V LGFE IF
Sbjct: 124 EEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNAL 183
Query: 241 ----------QSMTRDYGIEPQ---IEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPD 284
+S + +GI+ + + Y C++D + E+ ++ I P+
Sbjct: 184 TDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPN 243
Query: 285 HIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNAYASSGKWKEAVQ 340
SL+ AC L+ G Q+ +++ D +L + Y G ++A+Q
Sbjct: 244 EFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQ 300
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 73/138 (52%), Gaps = 6/138 (4%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G ++H QV+K+ + LV++YGKCG + A+Q FDE+ + + +A +++ +
Sbjct: 262 QGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTE-IAWNSLVSVF 320
Query: 61 VEHGLVENAFEVFSRVKVK----DTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPN 115
+HGL ++A ++F R+ + + + + +++ G G + LD F M + V P
Sbjct: 321 GQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPG 380
Query: 116 EVTIVCVLSACSQLGALE 133
E CV+ + G L+
Sbjct: 381 EEHYSCVIDLLGRAGRLK 398
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 34/185 (18%), Positives = 83/185 (44%), Gaps = 38/185 (20%)
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
M +R++ ++ ++I+GL+ + + EA+ F M G PT+ F + AC+ G +++G
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
++ + +GI ++ + D+ S+ G++ ACK
Sbjct: 61 KQM-HCLALKFGIGSELFVGSNLEDMYSKC----------------------GAMFDACK 97
Query: 297 IHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM--KEAGVQKEP 354
+ ++ +++ ++ + + Y+ G+++EA+ KM +E + +
Sbjct: 98 VFEEMPCKDEV-------------SWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHV 144
Query: 355 GCSSI 359
CS++
Sbjct: 145 LCSTL 149
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/421 (43%), Positives = 261/421 (61%), Gaps = 1/421 (0%)
Query: 36 DAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNG 95
+A +LF+ MP C +V + M+ Y + G++E A VF + KD V W AM+ + G
Sbjct: 304 EAKELFNMMP-CRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGG 362
Query: 96 EMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGG 155
L LF EM R N CVLS C+ + ALE G +H + + + VG
Sbjct: 363 CSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGN 422
Query: 156 ALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRP 215
AL+ MY +CG+++ A FEEM+ERDV ++N++IAG A HG EA+E+F M +P
Sbjct: 423 ALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKP 482
Query: 216 TKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDF 275
+T VGVL ACSH GLV+ G F SM D+G+ + EHY C++DLL R GR EA+D
Sbjct: 483 DDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDL 542
Query: 276 ITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKW 335
+ +M PD M G+LL A +IH +LG A+++ + ++G YVLLSN YASSGKW
Sbjct: 543 MKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKW 602
Query: 336 KEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLE 395
++A ++R M+E GV+K PG S IEV N++H F GD HP++E+IY +++L +K
Sbjct: 603 RDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKA 662
Query: 396 GYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMI 455
GY +T++VLHD+E+ EKE L HSE+LA+ YG+++ P IRV+KNLRVC DCH+
Sbjct: 663 GYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAF 722
Query: 456 K 456
K
Sbjct: 723 K 723
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 143/341 (41%), Gaps = 65/341 (19%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
++ Y + G ++A LF+ E DV++ +++ YV+ G + A E+F R+ +D V
Sbjct: 168 MLAAYVRNGRVEEARGLFNSRTEW-DVISWNALMSGYVQWGKMSEARELFDRMPGRDVVS 226
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W M+ G R G+M A LF +V T V+S +Q G LE R + M
Sbjct: 227 WNIMVSGYARRGDMVEARRLFDAAPVRDV----FTWTAVVSGYAQNGMLEEARRVFDAMP 282
Query: 144 -KHRIDLNHIVGG-----------ALINM---------------YSRCGDIDKALQVFEE 176
++ + N +V L NM Y++ G +++A VF+
Sbjct: 283 ERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDT 342
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
M ++D ++ +++A + G S E +++F EM G + F VL+ C+ ++ G
Sbjct: 343 MPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECG 402
Query: 237 FEIFQSMTR-DYGI-----------------------------EPQIEHYGCIVDLLSRV 266
++ + R YG+ E + + ++ +R
Sbjct: 403 MQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARH 462
Query: 267 GRPEEA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLG 304
G +EA +D + PD I L +L+AC G ++ G
Sbjct: 463 GFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKG 503
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 99/211 (46%), Gaps = 15/211 (7%)
Query: 34 FKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVR 93
DA LFDEMP D V VMI+ + HGLV A F KD V W M+ VR
Sbjct: 116 LADARGLFDEMP-VRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVR 174
Query: 94 NGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM-GKHRIDLNHI 152
NG + A LF +V ++ ++S Q G + R + M G+ + N +
Sbjct: 175 NGRVEEARGLFNSRTEWDV----ISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIM 230
Query: 153 VGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG 212
V G Y+R GD+ +A ++F+ RDV T+ ++++G A +G EA +F M +
Sbjct: 231 VSG-----YARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER- 284
Query: 213 IRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
V++ ++ A ++D E+F M
Sbjct: 285 ---NAVSWNAMVAAYIQRRMMDEAKELFNMM 312
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 34/196 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++HG++++ G L+ +Y KCG +DA F+EM E DVV+ MI Y
Sbjct: 402 GMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEE-RDVVSWNTMIAGYA 460
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG + A E+F ++ T +P+++T+V
Sbjct: 461 RHGFGKEALEIFDMMRTTST-------------------------------KPDDITLVG 489
Query: 122 VLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VL+ACS G +E G + +S + +I++ R G + +A + ++M E
Sbjct: 490 VLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFE 549
Query: 180 RDVTTYNSLIAGLAMH 195
D T + +L+ +H
Sbjct: 550 PDSTMWGALLGASRIH 565
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 120/305 (39%), Gaps = 64/305 (20%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
+V+ S I ++ G V +A +F+ + + T + AM+ G NG + A LFR +
Sbjct: 37 EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP 96
Query: 109 R-DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
R DN N T++ L+ S L
Sbjct: 97 RPDNYSYN--TLLHALAVSSSLA------------------------------------- 117
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A +F+EM RD TYN +I+ A HG V + R + V++ G+L A
Sbjct: 118 -DARGLFDEMPVRDSVTYNVMISSHANHG----LVSLARHYFDLAPEKDAVSWNGMLAAY 172
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPD 284
G V+ +F S T E + + ++ + G+ EA +D + +
Sbjct: 173 VRNGRVEEARGLFNSRT-----EWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSW 227
Query: 285 HIMLGSLLSACKIHGKLQLGEQI-AKRLLDCRSA-DSGTYVLLSNAYASSGKWKEAVQIR 342
+IM + G + G+ + A+RL D D T+ + + YA +G +EA ++
Sbjct: 228 NIM---------VSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVF 278
Query: 343 AKMKE 347
M E
Sbjct: 279 DAMPE 283
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 34/222 (15%)
Query: 146 RIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMF 205
R++ I I + R G + A ++F M R +TYN+++AG + +GR A +F
Sbjct: 33 RLEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF 92
Query: 206 REMINQGIRPTKVTFVGVLNACSHG-------GLVD-------LGFEIFQSMTRDYGIEP 251
R + RP ++ +L+A + GL D + + + S ++G+
Sbjct: 93 RAI----PRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVS 148
Query: 252 QIEHYGCIV---DLLS---------RVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
HY + D +S R GR EEA N + D I +L+S G
Sbjct: 149 LARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF-NSRTEWDVISWNALMSGYVQWG 207
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQI 341
K+ ++ R+ D ++ ++ + YA G EA ++
Sbjct: 208 KMSEARELFDRM---PGRDVVSWNIMVSGYARRGDMVEARRL 246
>gi|224143723|ref|XP_002325053.1| predicted protein [Populus trichocarpa]
gi|222866487|gb|EEF03618.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/496 (40%), Positives = 294/496 (59%), Gaps = 40/496 (8%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG++ H +LKLG +S+ L+ Y CG
Sbjct: 144 EGKQAHAHLLKLGFQSDVYINNSLIHFYASCGS--------------------------- 176
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+E+A VF ++ + V W AMID V GE AL LF + Q+ P+ TI
Sbjct: 177 -----LESAKNVFDKMPQRSLVSWNAMIDAFVLFGEFETALQLFVQFQQQFFEPDGYTIQ 231
Query: 121 CVLSACSQLGALELGRWIHSYMGKH---RIDLNHI-VGGALINMYSRCGDIDKALQVFEE 176
V++AC+ L AL LG W H+++ ++ + +H+ V +L++MY +CG +D A Q+FE
Sbjct: 232 SVINACAGLCALSLGMWAHAFLLRNCGVSVARDHVLVNNSLLDMYCKCGSLDIATQIFEG 291
Query: 177 MKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN-QGIRPTKVTFVGVLNACSHGGLVDL 235
M++ DVT++NS+I G AMHG+ A+E F MI P +TFVGVL+AC+H +V+
Sbjct: 292 MQKHDVTSWNSMILGFAMHGKGELALECFERMIRISRFVPNSITFVGVLSACNHRYMVNE 351
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL-SA 294
G + F M +Y IEPQ+EHYGC+VD+L+R G +EA + + +M + PD ++ SLL S
Sbjct: 352 GRKYFDMMVNEYKIEPQLEHYGCLVDILARAGLIDEALELVASMPMKPDVVIWRSLLDSC 411
Query: 295 CKIHGKLQLGEQIAKRLLDCRSADS-GTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
CK + ++L E IA+++L+ ADS G YVLLS YAS+ +W + +R M G+ KE
Sbjct: 412 CKKNASVELSENIARQILESEEADSSGVYVLLSRVYASASRWNDVGLVRKLMTNNGILKE 471
Query: 354 PGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPS-TEVVLHDIEDWE 412
PGCS IEV+ HEF GD HPQ ++IY+ + +++ + GY P ++ + D +
Sbjct: 472 PGCSLIEVDGVTHEFFAGDTSHPQTKEIYQVLNVVEERIDSTGYKPDYSQAPMVDELNTS 531
Query: 413 KEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRN 472
K +L +HSERLAI GL++ KP IR+ KNLRVC+DCH + LI+ I +IIVRDR
Sbjct: 532 KRDSLRLHSERLAIALGLLNLKPGMPIRIFKNLRVCDDCHKVTGLISEIFNVEIIVRDRV 591
Query: 473 RFHHFENGTCSCGDYW 488
RFHHF++G+CSC DYW
Sbjct: 592 RFHHFKDGSCSCMDYW 607
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 119/251 (47%), Gaps = 8/251 (3%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEM---ARALDLFREM-QRDNVRPNEVTIVCVLS 124
A+ VF +V ++ W +I ++ + A+ L+ M QR + P+ T VL
Sbjct: 75 AYRVFDQVDNPNSFMWNILIRACAQSQSVHLKREAILLYNTMLQRSSPFPDNHTFPFVLK 134
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
AC+ L AL G+ H+++ K + + +LI+ Y+ CG ++ A VF++M +R + +
Sbjct: 135 ACAYLFALFEGKQAHAHLLKLGFQSDVYINNSLIHFYASCGSLESAKNVFDKMPQRSLVS 194
Query: 185 YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT 244
+N++I + G A+++F + Q P T V+NAC+ + LG +
Sbjct: 195 WNAMIDAFVLFGEFETALQLFVQFQQQFFEPDGYTIQSVINACAGLCALSLGMWAHAFLL 254
Query: 245 RDYGIEPQIEHY---GCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
R+ G+ +H ++D+ + G + A M+ D S++ +HGK
Sbjct: 255 RNCGVSVARDHVLVNNSLLDMYCKCGSLDIATQIFEGMQ-KHDVTSWNSMILGFAMHGKG 313
Query: 302 QLGEQIAKRLL 312
+L + +R++
Sbjct: 314 ELALECFERMI 324
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/442 (41%), Positives = 282/442 (63%), Gaps = 1/442 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D++ ++I+ Y + G + A +F +K KD V WT+MI V NG AL +F M
Sbjct: 346 SDLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLM 405
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ +V P+ +T+V +LSA + L AL G+ IH ++ + L +L++MY+ CG +
Sbjct: 406 KETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSL 465
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+ A +VF + + + + ++I MHGR AVE+F M +Q + P +TF+ +L AC
Sbjct: 466 ENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYAC 525
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SH GL++ G + ++M Y +EP EHY C+VDLL R EEAY F+ +M+I P +
Sbjct: 526 SHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEV 585
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+ L AC+IH +LGE A++LLD G+YVL+SN +A+SG+WK+ ++R +MK
Sbjct: 586 WCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKG 645
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLE-GYSPSTEVVLH 406
G++K PGCS IEV N++H F++ D HP+ +IY+K+ ++ + ++ E GY P T++VLH
Sbjct: 646 GGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQKLAQITEKLEKEGGYVPQTKLVLH 705
Query: 407 DIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKI 466
++ EK L HSERLAI YGL+ST T IR+ KNLRVC DCH+ KL++ +R++
Sbjct: 706 NVGKEEKVQMLYGHSERLAIAYGLMSTSEGTPIRITKNLRVCVDCHTFCKLVSKFFEREL 765
Query: 467 IVRDRNRFHHFENGTCSCGDYW 488
IVRD +RFHHFE+G CSCGD+W
Sbjct: 766 IVRDASRFHHFEDGVCSCGDFW 787
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 126/264 (47%), Gaps = 32/264 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G EIHG ++K G S LV +Y KC + A +LFD M E NDVV+
Sbjct: 29 GAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFDRMNERNDVVS--------- 79
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
W ++I NG+ AL LFREMQ+ V N T+V
Sbjct: 80 ----------------------WNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVA 117
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
L AC +LG IH+ + K L+ V AL+ M+ R G + A ++F+E+ E+D
Sbjct: 118 ALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKD 177
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
T+NS+IAG +G EA++ F + + ++P +V+ + +L A G + G EI
Sbjct: 178 NITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHA 237
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSR 265
+++ ++ + ++D+ S+
Sbjct: 238 YAMKNW-LDSNLRIGNTLIDMYSK 260
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 102/180 (56%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV + ++ +V G + A +F + KD + W +MI G +NG AL F +Q
Sbjct: 146 DVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQ 205
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
N++P+EV+++ +L+A +LG L G+ IH+Y K+ +D N +G LI+MYS+C +
Sbjct: 206 DANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVA 265
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A VF++M +D+ ++ ++IA A + EA+++ R++ +G+ + L ACS
Sbjct: 266 YAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACS 325
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 160/354 (45%), Gaps = 37/354 (10%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIH +K L SN L+++Y KC A +FD+M IN
Sbjct: 232 GKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKM------------IN--- 276
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
KD + WT +I +N AL L R++Q + + + I
Sbjct: 277 -----------------KDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGS 319
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
L ACS L L + +H Y K + + ++ +I++Y+ CG+I+ A ++FE +K +D
Sbjct: 320 TLLACSGLRCLSHAKEVHGYTLKRGLS-DLMMQNMIIDVYADCGNINYATRMFESIKCKD 378
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ S+I+ +G + EA+ +F M + P +T V +L+A + ++ G EI
Sbjct: 379 VVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHG 438
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+ R G + +VD+ + G E AY + + ++ ++++A +HG+
Sbjct: 439 FIFRK-GFMLEGSTVNSLVDMYACCGSLENAYKVFICTR-SKSLVLWTTMINAYGMHGRG 496
Query: 302 QLGEQIAKRLLDCRS-ADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
+ ++ + D + D T++ L A + SG E ++ MK Q EP
Sbjct: 497 KAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMK-CKYQLEP 549
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 75/140 (53%), Gaps = 1/140 (0%)
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M+ V + T CVL AC + + G IH + K D V +L++MY++C D
Sbjct: 1 MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60
Query: 167 IDKALQVFEEMKER-DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
I A ++F+ M ER DV ++NS+I+ +++G+ +EA+ +FREM G+ T V L
Sbjct: 61 ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120
Query: 226 ACSHGGLVDLGFEIFQSMTR 245
AC LG EI ++ +
Sbjct: 121 ACEDSSFKKLGMEIHAAILK 140
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 33/179 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+EIHG + + G ST LV++Y CG ++A ++F +V T MIN Y
Sbjct: 432 KGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFI-CTRSKSLVLWTTMINAY 490
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG + A E+FS M+ + P+ +T +
Sbjct: 491 GMHGRGKAAVELFSI-------------------------------MEDQKLIPDHITFL 519
Query: 121 CVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
+L ACS G + G R + + K++++ L+++ R +++A + M+
Sbjct: 520 ALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQ 578
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/487 (37%), Positives = 280/487 (57%), Gaps = 31/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H V+KLG S+ L ++Y K G+ + A +F EC +VV+
Sbjct: 226 GRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVS--------- 276
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+T +IDG V ++ + L +F E++R + PNE T
Sbjct: 277 ----------------------YTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSS 314
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
++ AC+ ALE G +H+ + K D + V L++MY +CG +++A+Q F+E+ +
Sbjct: 315 LIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPT 374
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+NSL++ HG +A+++F M+++G++P +TF+ +L CSH GLV+ G + F
Sbjct: 375 EIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFY 434
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM + YG+ P EHY C++DLL R GR +EA +FI M P+ S L AC+IHG
Sbjct: 435 SMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDK 494
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++G+ A++L+ +SG VLLSN YA+ +W++ +R +M++ V+K PG S ++V
Sbjct: 495 EMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDV 554
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ H F D HP++ IY+K+ L +K GY P T+ V D++D KE L HS
Sbjct: 555 GYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHS 614
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ER+A+ + LIS I V KNLRVC DCHS IK I+ +T RKIIVRD +RFHHF +G+
Sbjct: 615 ERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGS 674
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 675 CSCGDYW 681
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 149/320 (46%), Gaps = 35/320 (10%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
++N Y + G +++A ++F + ++ V WTAMI GL +N + + A+ F M+ P
Sbjct: 46 LVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPT 105
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
+ + AC+ LG++E+G+ +H K I VG L +MYS+CG + A +VFE
Sbjct: 106 QFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFE 165
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS------- 228
EM +D ++ ++I G + G EA+ F++MI++ + + L AC
Sbjct: 166 EMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKF 225
Query: 229 ----HGGLVDLGFE--IF---------------QSMTRDYGIEPQ---IEHYGCIVDLLS 264
H +V LGFE IF +S + +GI+ + + Y C++D
Sbjct: 226 GRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYV 285
Query: 265 RVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSG 320
+ E+ ++ I P+ SL+ AC L+ G Q+ +++ D
Sbjct: 286 ETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPF 345
Query: 321 TYVLLSNAYASSGKWKEAVQ 340
+L + Y G ++A+Q
Sbjct: 346 VSSILVDMYGKCGLLEQAIQ 365
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 150/317 (47%), Gaps = 43/317 (13%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H LK G+ S L ++Y KCG DA ++F+EMP C D V+ T MI
Sbjct: 125 GKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP-CKDEVSWTAMI---- 179
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
DG + GE AL F++M + V ++ +
Sbjct: 180 ---------------------------DGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCS 212
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE-R 180
L AC L A + GR +HS + K + + VG AL +MYS+ GD++ A VF E R
Sbjct: 213 TLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECR 272
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+V +Y LI G + + + +F E+ QGI P + TF ++ AC++ ++ G ++
Sbjct: 273 NVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLH 332
Query: 241 -QSMTRDYGIEPQIEHYGCIVDLLSRVGRPE---EAYDFITNMKIAPDHIMLGSLLSACK 296
Q M ++ +P + +VD+ + G E +A+D I + P I SL+S
Sbjct: 333 AQVMKINFDEDPFVS--SILVDMYGKCGLLEQAIQAFDEIGD----PTEIAWNSLVSVFG 386
Query: 297 IHGKLQLGEQIAKRLLD 313
HG + +I +R++D
Sbjct: 387 QHGLGKDAIKIFERMVD 403
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 73/138 (52%), Gaps = 6/138 (4%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G ++H QV+K+ + LV++YGKCG + A+Q FDE+ + + +A +++ +
Sbjct: 327 QGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTE-IAWNSLVSVF 385
Query: 61 VEHGLVENAFEVFSRVKVK----DTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPN 115
+HGL ++A ++F R+ + + + + +++ G G + LD F M + V P
Sbjct: 386 GQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPG 445
Query: 116 EVTIVCVLSACSQLGALE 133
E CV+ + G L+
Sbjct: 446 EEHYSCVIDLLGRAGRLK 463
>gi|15222513|ref|NP_174474.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169173|sp|Q9C6T2.1|PPR68_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31920
gi|12321292|gb|AAG50713.1|AC079041_6 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193295|gb|AEE31416.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/489 (37%), Positives = 295/489 (60%), Gaps = 33/489 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG++IHGQV KLGL ++ + L+ +YG+CGE
Sbjct: 150 EGKQIHGQVFKLGLEADVFVQNSLINMYGRCGE--------------------------- 182
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPNEVTI 119
+E + VF +++ K W++M+ G + L LFR M N++ E +
Sbjct: 183 -----MELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGM 237
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V L AC+ GAL LG IH ++ ++ +LN IV +L++MY +CG +DKAL +F++M++
Sbjct: 238 VSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEK 297
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
R+ TY+++I+GLA+HG A+ MF +MI +G+ P V +V VLNACSH GLV G +
Sbjct: 298 RNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRV 357
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F M ++ +EP EHYGC+VDLL R G EEA + I ++ I + ++ + LS C++
Sbjct: 358 FAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQ 417
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
++LG+ A+ LL S + G Y+L+SN Y+ W + + R ++ G+++ PG S +
Sbjct: 418 NIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIV 477
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E+ + H F+ D HP+ ++IYK + +++ +K EGYSP +L ++++ EK+ L
Sbjct: 478 ELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKG 537
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HS+++AI +GL+ T P + I++ +NLR+C+DCH+ K I+ I +R+I+VRDRNRFH F+
Sbjct: 538 HSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKG 597
Query: 480 GTCSCGDYW 488
GTCSC DYW
Sbjct: 598 GTCSCKDYW 606
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 144/288 (50%), Gaps = 5/288 (1%)
Query: 69 AFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQ 128
A +F + T + MI G V AL + EM + P+ T C+L AC++
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 129 LGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
L ++ G+ IH + K ++ + V +LINMY RCG+++ + VFE+++ + +++S+
Sbjct: 145 LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSM 204
Query: 189 IAGLAMHGRSIEAVEMFREMINQ-GIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDY 247
++ A G E + +FR M ++ ++ + V L AC++ G ++LG I + R+
Sbjct: 205 VSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNI 264
Query: 248 GIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLG-EQ 306
E I +VD+ + G ++A M+ +++ +++S +HG+ +
Sbjct: 265 S-ELNIIVQTSLVDMYVKCGCLDKALHIFQKME-KRNNLTYSAMISGLALHGEGESALRM 322
Query: 307 IAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
+K + + D YV + NA + SG KE ++ A+M + G + EP
Sbjct: 323 FSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEG-KVEP 369
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/488 (37%), Positives = 293/488 (60%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+ +HG V+KLG+ L+ +YGK G F DA
Sbjct: 259 EGKSLHGVVVKLGMSGKAKVVNSLINMYGKLG-FLDA----------------------- 294
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
A ++F + V+ V W +M+ NG + +DLF M+R + P++ T+V
Sbjct: 295 --------ASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMV 346
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L AC+ G IH+Y+ + + + I+ AL+N+Y++ G ++ + +FEE+K+R
Sbjct: 347 ALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDR 406
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D + +++AG A+H EA+++F M+ +G+ VTF +L+ACSH GLV+ G + F
Sbjct: 407 DTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYF 466
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ M+ Y +EP+++HY C+VDLL R GR E+AY+ I +M + P + G+LL AC+++G
Sbjct: 467 EIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGN 526
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++LG+++A++LL +D Y++LSN Y+++G W+ A ++R MKE + + PGCS IE
Sbjct: 527 VELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERRLTRNPGCSFIE 586
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
N+IH F++GD HP+ ++I+ K++EL + + G +P TE VLHDI++ K + H
Sbjct: 587 HGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIXEAGCAPKTEFVLHDIDEEVKVDMINKH 646
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI +GL+ T + + KNLR+C DCHS K + + KR II+RD RFHHF +G
Sbjct: 647 SEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFADG 706
Query: 481 TCSCGDYW 488
CSC DYW
Sbjct: 707 LCSCRDYW 714
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 143/296 (48%), Gaps = 35/296 (11%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
IH +V+K S+ +LV +Y K G +DA +LFDEMP
Sbjct: 161 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPN------------------ 202
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR-PNEVTIVCVL 123
+D V W +++ GL G + L+ F M+ ++ R PNEVT++ V+
Sbjct: 203 --------------RDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVV 248
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
SAC+ +GAL+ G+ +H + K + V +LINMY + G +D A Q+FEEM R +
Sbjct: 249 SACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLV 308
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
++NS++ +G + + +++F M GI P + T V +L AC+ GL I +
Sbjct: 309 SWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYI 368
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
R G I +++L +++GR + D +K D I ++L+ +H
Sbjct: 369 HR-CGFNADIIIATALLNLYAKLGRLNASEDIFEEIK-DRDTIAWTAMLAGYAVHA 422
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 117/265 (44%), Gaps = 38/265 (14%)
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
++V +S+C+ + IH+ + K + +G L++MY + G + A ++F+EM
Sbjct: 144 SLVFAISSCTSVSYCSA---IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 200
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMF-REMINQGIRPTKVTFVGVLNACS-------- 228
RD+ ++NSL++GL+ G + F R G +P +VT + V++AC+
Sbjct: 201 PNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEG 260
Query: 229 ---HGGLVDLGF----EIFQSMTRDYGIEPQIE---------------HYGCIVDLLSRV 266
HG +V LG ++ S+ YG ++ + +V + +
Sbjct: 261 KSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHN 320
Query: 267 GRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTY 322
G E+ D MK I PD + +LL AC G + E I + C +AD
Sbjct: 321 GYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIA 380
Query: 323 VLLSNAYASSGKWKEAVQIRAKMKE 347
L N YA G+ + I ++K+
Sbjct: 381 TALLNLYAKLGRLNASEDIFEEIKD 405
>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g52630-like [Cucumis
sativus]
Length = 598
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/487 (40%), Positives = 285/487 (58%), Gaps = 33/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H +K G + LV++Y KCGE DA LFDEMPE
Sbjct: 145 GKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPE--------------- 189
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ V W+ MI G + + AL LF++ ++V N+ T
Sbjct: 190 -----------------RNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSS 232
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V+ CS LELG+ IH K D + VG ALI++YS+CG I+ A QVF+E+ R+
Sbjct: 233 VIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRN 292
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ +NS++ A H + +F EM N G++P + F+ VL ACSH GLV+ G E F
Sbjct: 293 LGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYF- 351
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
S+ RDYGIEP+ EHY +VDLL R G+ +EA I M + P + G+LL+ C+IH
Sbjct: 352 SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDT 411
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++ +A R+L+ S+ SG +VLLSNAYA++G+++EA ++R +++ GV+KE G S +E
Sbjct: 412 EMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEE 471
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N++H F GD H + +IY+K++EL++ ++ GY T VL ++ EK + HS
Sbjct: 472 GNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHS 531
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ERLAI +GLI+ P IRV+KNLRVC DCH+ IK ++ R +IVRD NRFH FE+G
Sbjct: 532 ERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGK 591
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 592 CSCGDYW 598
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 156/380 (41%), Gaps = 68/380 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G ++H +LK GL++ L+ LY K ++Q+FDE P+
Sbjct: 43 QGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPK-------------- 88
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
K + W+++I +N AL FR M D VRP++
Sbjct: 89 ------------------KSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYP 130
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
AC L ++G+ +H K + VG +L++MY++CG+I A +F+EM ER
Sbjct: 131 SATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPER 190
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+V +++ +I G A +EA+ +F++ + + + TF V+ CS ++LG ++
Sbjct: 191 NVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELG-KLI 249
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDF------------------------- 275
+ + ++ L S+ G E AY
Sbjct: 250 HGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHT 309
Query: 276 ---------ITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLL 325
+ N+ + P+ I S+L AC G ++ G + + D ++ Y L
Sbjct: 310 QRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASL 369
Query: 326 SNAYASSGKWKEAVQIRAKM 345
+ +GK +EAV + +M
Sbjct: 370 VDLLGRAGKLQEAVSVIKQM 389
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 68/130 (52%)
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
+ +++ N I +L + ++ +L G +H+++ K + +V LIN+YS+
Sbjct: 16 LNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQL 75
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+LQVF+E ++ TT++S+I+ A + + A++ FR M+N G+RP + A
Sbjct: 76 PLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKA 135
Query: 227 CSHGGLVDLG 236
C D+G
Sbjct: 136 CGFLRRSDVG 145
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/441 (40%), Positives = 278/441 (63%), Gaps = 1/441 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D+ S +++ Y + G + A VFS ++VKD + W +I G +N AL LF +
Sbjct: 431 DIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLL 490
Query: 109 RDN-VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ P+E T+ CVL AC+ L A + GR IH Y+ ++ + V +L++MY++CG +
Sbjct: 491 VEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL 550
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A +F+++ +D+ ++ +IAG MHG EA+ +F +M GI P +++FV +L AC
Sbjct: 551 LLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYAC 610
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SH GLVD G+ F M + IEP +EHY CIVD+L+R G +AY FI NM I PD +
Sbjct: 611 SHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATI 670
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
G+LL C+IH ++L E++A+++ + ++G YVL++N YA + KW+E ++R ++ +
Sbjct: 671 WGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQ 730
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
G++K PGCS IE+ ++ F+ GD +P+ E+I ++ ++ + EGYSP T+ L D
Sbjct: 731 RGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEAFLRGVRARMIEEGYSPLTKYALID 790
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
E+ EKE AL HSE+LA+ G+IS+ IRV KNLRVC DCH M K ++ +T+R+I+
Sbjct: 791 AEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIV 850
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
+RD NRFH F++G CSC +W
Sbjct: 851 LRDSNRFHQFKDGHCSCRGFW 871
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 171/420 (40%), Gaps = 102/420 (24%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++HG +LK G S LV Y K A ++FDEM E
Sbjct: 214 GEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTE--------------- 258
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+D + W ++I+G V NG + L +F +M + + TIV
Sbjct: 259 -----------------RDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVS 301
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V + C+ + LGR +H + K L++MYS+CGD+D A VF EM R
Sbjct: 302 VFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRS 361
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +Y S+IAG A G + EAV++F EM +GI P T VLN C+ L+D G + +
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHE 421
Query: 242 SMT-RDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKI------------------- 281
+ D G + + + ++D+ ++ G EA + M++
Sbjct: 422 WIKENDMGFDIFVSN--ALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYA 479
Query: 282 ----------------APDHIMLGSLLSAC----------KIHGKL-------------- 301
+PD + +L AC +IHG +
Sbjct: 480 NEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS 539
Query: 302 ------QLGEQIAKRLL--DCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
+ G + RLL D S D ++ ++ Y G KEA+ + +M++AG++ +
Sbjct: 540 LVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPD 599
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 149/324 (45%), Gaps = 40/324 (12%)
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
Y G ++ A VF +VK++ + W +++ L ++G+ + ++ LF++M V + T
Sbjct: 139 YTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
CV + S L ++ G +H Y+ K + VG +L+ Y + +D A +VF+EM E
Sbjct: 199 SCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTE 258
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG--- 236
RDV ++NS+I G +G + + + +F +M+ GI T V V C+ L+ LG
Sbjct: 259 RDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAV 318
Query: 237 --FEIFQSMTR-DYGIEPQIEHYGCIVDLLS------------------------RVGRP 269
F + +R D ++ Y DL S R G
Sbjct: 319 HCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLA 378
Query: 270 EEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLS 326
EA M+ I+PD + ++L+ C + L G+++ + + + D G + +S
Sbjct: 379 GEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWI---KENDMGFDIFVS 435
Query: 327 NA----YASSGKWKEAVQIRAKMK 346
NA YA G +EA + ++M+
Sbjct: 436 NALMDMYAKCGSMREAELVFSEMR 459
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 36/198 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GREIHG +++ G S+R LV++Y KCG A LFD++ D+V+ TVMI Y
Sbjct: 517 KGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITS-KDLVSWTVMIAGY 575
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG + A+ LF +M++ + P+E++ V
Sbjct: 576 GMHGFGK-------------------------------EAIALFNQMRQAGIEPDEISFV 604
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG--GALINMYSRCGDIDKALQVFEEMK 178
+L ACS G ++ G W + +H + V +++M +R G++ KA + E M
Sbjct: 605 SLLYACSHSGLVDEG-WRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMP 663
Query: 179 -ERDVTTYNSLIAGLAMH 195
D T + +L+ G +H
Sbjct: 664 IPPDATIWGALLCGCRIH 681
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 94 NGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIV 153
+G + A+ L + ++ P T+ VL C+ +L+ G+ + +++ + L+ +
Sbjct: 74 SGNLKNAVKLLHVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNL 131
Query: 154 GGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGI 213
G L MY+ CGD+ +A +VF+++K +N L+ LA G ++ +F++M++ G+
Sbjct: 132 GSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGV 191
Query: 214 RPTKVTFVGVLNACS-----------HGGLVDLGF 237
TF V + S HG ++ GF
Sbjct: 192 EMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGF 226
>gi|356496086|ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/489 (38%), Positives = 284/489 (58%), Gaps = 33/489 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG +IH V GL + + L+ +YGKCG
Sbjct: 149 EGVQIHAHVFNAGLEVDVFVQNGLISMYGKCGA--------------------------- 181
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV-RPNEVTI 119
+E+A VF ++ K W+++I L L +M R+ R E +
Sbjct: 182 -----IEHAGVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSREGRHRAEESIL 236
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V LSAC+ LG+ LGR IH + ++ +LN +V +LI+MY +CG ++K L VF+ M
Sbjct: 237 VSALSACTHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAH 296
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
++ +Y +IAGLA+HGR EA+ +F +M+ +G+ P V +VGVL+ACSH GLV GF+
Sbjct: 297 KNRYSYTVMIAGLAIHGRGREALRVFSDMLEEGLTPDDVVYVGVLSACSHAGLVKEGFQC 356
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F M ++ I+P I+HYGC+VDL+ R G +EAYD I +M I P+ ++ SLLSACK+H
Sbjct: 357 FNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIKPNDVVWRSLLSACKVHH 416
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
L++GE A + + G Y++L+N YA + KW +IR +M E + + PG S +
Sbjct: 417 NLEIGEIAADNIFKLNKHNPGDYLVLANMYARAQKWANVARIRTEMVEKNLVQTPGFSLV 476
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E N +++F+ D PQ E IY +Q+++ +K EGY+P VL D+++ EK L
Sbjct: 477 EANRNVYKFVSQDKSQPQCETIYDMIQQMEWQLKFEGYTPDMSQVLLDVDEDEKRQRLKH 536
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HS++LAI + LI T + +R+ +NLR+CNDCH+ K I+ I +R+I VRD NRFHHF++
Sbjct: 537 HSQKLAIAFALIQTSEGSPVRISRNLRMCNDCHTYTKFISVIYEREITVRDSNRFHHFKD 596
Query: 480 GTCSCGDYW 488
GTCSC DYW
Sbjct: 597 GTCSCKDYW 605
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 160/349 (45%), Gaps = 36/349 (10%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
E +++H +LKLGL F D+ S ++ +C
Sbjct: 46 EFKKVHAHILKLGL-------------------FYDSF------------CGSNLVASCA 74
Query: 61 VEH-GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
+ G +E A +F +++ + + MI G V + ++ AL L+ EM + P+ T
Sbjct: 75 LSRWGSMEYACSIFRQIEEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTY 134
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
VL ACS L AL+ G IH+++ ++++ V LI+MY +CG I+ A VFE+M E
Sbjct: 135 PFVLKACSLLVALKEGVQIHAHVFNAGLEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDE 194
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGI-RPTKVTFVGVLNACSHGGLVDLGFE 238
+ V +++S+I A E + + +M +G R + V L+AC+H G +LG
Sbjct: 195 KSVASWSSIIGAHASVEMWHECLMLLGDMSREGRHRAEESILVSALSACTHLGSPNLGRC 254
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
I + R+ E + ++D+ + G E+ NM + +++ IH
Sbjct: 255 IHGILLRNIS-ELNVVVKTSLIDMYVKCGSLEKGLCVFQNMA-HKNRYSYTVMIAGLAIH 312
Query: 299 GKLQLGEQIAKRLL-DCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
G+ + ++ +L + + D YV + +A + +G KE Q +M+
Sbjct: 313 GRGREALRVFSDMLEEGLTPDDVVYVGVLSACSHAGLVKEGFQCFNRMQ 361
>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
[Vitis vinifera]
gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/488 (38%), Positives = 288/488 (59%), Gaps = 33/488 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H QVLK ++ L+ LY + G F +A+++FD MP
Sbjct: 197 GRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFDEALRVFDGMPH--------------- 241
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ V W ++I GLV+ + A++ FR MQ + + VT+
Sbjct: 242 -----------------RNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTT 284
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L C+++ AL G+ IH+ + K + V +L++MY++CG +D +VF M+ +D
Sbjct: 285 ILPVCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKD 344
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+T++N+LI G A++GR EA+E F+EMI G P +TF+ +L+ CSH GL D G +F+
Sbjct: 345 LTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFE 404
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M DYGI P +EHY C+VD+L R GR +EA + + NM P + GSLL++C++HG +
Sbjct: 405 MMKMDYGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNV 464
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
L E +AKRL + ++G YV+LSN YA++G W+ +R M++ G+ KE GCS +++
Sbjct: 465 PLAEAVAKRLFELEPNNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQI 524
Query: 362 NNEIHEFILGDIRHPQREQIYKKM-QELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
++IH F+ G + YKK+ + L + ++ GY P T VVLHD+ + + + H
Sbjct: 525 KSKIHTFVAGGSNEFRNSVEYKKVWKRLMEAMEEVGYVPDTGVVLHDVSEEMRAMWVCGH 584
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLA + LI+T IR+ KNLRVC DCHS +K ++ +T R I++RD NRFHHF++G
Sbjct: 585 SERLATMFALINTASGMPIRITKNLRVCVDCHSWVKTLSKVTGRVIVLRDTNRFHHFKDG 644
Query: 481 TCSCGDYW 488
CSC DYW
Sbjct: 645 VCSCKDYW 652
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 147/334 (44%), Gaps = 32/334 (9%)
Query: 14 LRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVF 73
L +N + + KL+ L+ C +A ++F++ E D+ S
Sbjct: 105 LLNNPTLKGKLITLFSVCRRVDEARRVFEDGGEDVDLPESV------------------- 145
Query: 74 SRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALE 133
W AM G RNG AL L+ EM + L ACS LG L+
Sbjct: 146 ----------WVAMGIGYSRNGYPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGDLQ 195
Query: 134 LGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLA 193
GR +H+ + K D + +V AL+ +YS G D+AL+VF+ M R+V ++NSLIAGL
Sbjct: 196 TGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFDEALRVFDGMPHRNVVSWNSLIAGLV 255
Query: 194 MHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQI 253
EA+E FR M +G+ + VT +L C+ + G EI + + +P
Sbjct: 256 KKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTA-KPDA 314
Query: 254 EHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL-QLGEQIAKRLL 312
+VD+ ++ G + M+ D +L++ I+G++ + E + +
Sbjct: 315 PVLNSLVDMYAKCGAMDYCRRVFNGMQ-GKDLTSWNTLITGYAINGRMTEAMESFQEMIC 373
Query: 313 DCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
S D T++ L + + +G + ++ MK
Sbjct: 374 SGFSPDGITFIALLSGCSHAGLADDGCRLFEMMK 407
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 86 AMIDGLVRNGEMARALDL--FREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
+ + L ++G++ AL L + + P+ L +C ALE G+ ++ +
Sbjct: 36 STLKSLSKSGKLDEALRLIEYWPSKSPATAPDVEACALFLHSCISRKALEHGQRLYLQLL 95
Query: 144 ------KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV----TTYNSLIAGLA 193
H + N + G LI ++S C +D+A +VFE+ E DV + + ++ G +
Sbjct: 96 LYRDRCNHNLLNNPTLKGKLITLFSVCRRVDEARRVFEDGGE-DVDLPESVWVAMGIGYS 154
Query: 194 MHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
+G EA+ ++ EM+ Q + F L ACS G + G
Sbjct: 155 RNGYPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGDLQTG 197
>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
Length = 600
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/559 (35%), Positives = 309/559 (55%), Gaps = 71/559 (12%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN-DVVASTVMINC 59
EG+ +H ++K G S+R L+E+YGKCG +A +FD++ E N DV++ +I
Sbjct: 42 EGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQIQEKNADVISWNGIIGA 101
Query: 60 YVEHGLVENAFEVFSRVKVK---------------------------------------D 80
Y ++GL + A +F + ++ D
Sbjct: 102 YTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEEGRIVHAIAVDKRLESD 161
Query: 81 TVCWTAMID--GLVRNGEMARA-----------------------------LDLFREMQR 109
T+ T++++ G +N + ARA + +FR M
Sbjct: 162 TMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMDL 221
Query: 110 DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDK 169
+ V+P+ VT + ++ AC+ L A GR +H + I ++ +G A+++ Y +CG +D
Sbjct: 222 EGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTAVMHFYGKCGRLDN 281
Query: 170 ALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH 229
A +F+ + +++ T+++++A A +G EA+E++ EM+ G+ +TF+G+L ACSH
Sbjct: 282 ARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNGITFLGLLFACSH 341
Query: 230 GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLG 289
G G + F SM RD+G+ P EHY ++DLL R G+ + + D I +M PD
Sbjct: 342 AGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLINSMPYEPDSSAWL 401
Query: 290 SLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
+LL AC++HG + G +IA+ + + DSG Y+LLSN Y+S+G+ EA + R M+ G
Sbjct: 402 ALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLSNLYSSTGRMDEARRTRKAMRLRG 461
Query: 350 VQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIE 409
+ K+PG SSIEV + +HEF+ HPQ +I+ +++ LK VK GY VL D+E
Sbjct: 462 ITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRIHAEIERLKARVKEAGYVADVRAVLRDVE 521
Query: 410 DWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVR 469
+ EKE L HSERLAI +GLIST P T + +VKNLRVC DCH+ +K I+ + RKI+VR
Sbjct: 522 EEEKEQLLWYHSERLAIAFGLISTPPGTALHIVKNLRVCFDCHAAVKAISKVVGRKIVVR 581
Query: 470 DRNRFHHFENGTCSCGDYW 488
D RFHHFENG CSCGDYW
Sbjct: 582 DAIRFHHFENGACSCGDYW 600
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
Query: 110 DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDK 169
D R T V +L C+ AL G+ +HS + K + ++ LI MY +CG I +
Sbjct: 18 DERREEISTYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAE 77
Query: 170 ALQVFEEMKER--DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A VF++++E+ DV ++N +I +G EA+ +F+ M +G+ +VT + ++AC
Sbjct: 78 ARSVFDQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDAC 137
Query: 228 S 228
+
Sbjct: 138 A 138
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/491 (38%), Positives = 285/491 (58%), Gaps = 36/491 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++ GQ K GL SN S ++ ++ K +DA + F+ + E
Sbjct: 392 GKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSE--------------- 436
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K+ V + +DG RN +A L E+ + + T
Sbjct: 437 -----------------KNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFAS 479
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+LS + +G++ G IHS + K + N V ALI+MYS+CG ID A +VF M+ R+
Sbjct: 480 LLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRN 539
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ S+I G A HG +I +E F +MI +G++P +VT+V +L+ACSH GLV G+ F
Sbjct: 540 VISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFN 599
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM D+ I+P++EHY C+VDLL R G +A++FI M D ++ + L AC++H
Sbjct: 600 SMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNT 659
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LG+ A+++L+ + Y+ LSN YA +GKW+E+ ++R KMKE + KE GCS IEV
Sbjct: 660 ELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEV 719
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWA----L 417
++IH+F +GD HP QIY ++ L +K GY P T++VLH +E+ E L
Sbjct: 720 GDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLL 779
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE++A+ +GLIST +RV KNLRVC DCH+ +K I+ ++ R+I++RD NRFHHF
Sbjct: 780 YQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHF 839
Query: 478 ENGTCSCGDYW 488
++G CSC DYW
Sbjct: 840 KDGKCSCNDYW 850
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 154/323 (47%), Gaps = 18/323 (5%)
Query: 48 NDVVASTVMINCYVE-HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
+DV +I+ +V+ ENA++VF ++ + V WT MI ++ G A+ F +
Sbjct: 200 SDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLD 259
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC-- 164
M ++ T+ V SAC++L L LG+ +HS+ R L V +L++MY++C
Sbjct: 260 MVLSGFESDKFTLSSVFSACAELENLSLGKQLHSW--AIRSGLVDDVECSLVDMYAKCSA 317
Query: 165 -GDIDKALQVFEEMKERDVTTYNSLIAGLAMH-GRSIEAVEMFREMINQG-IRPTKVTFV 221
G +D +VF+ M++ V ++ +LI G + + EA+ +F EMI QG + P TF
Sbjct: 318 DGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFS 377
Query: 222 GVLNACSHGGLVDLGFEIF-QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEE---AYDFIT 277
AC + +G ++ Q+ R G+ ++ + + R E+ A++ ++
Sbjct: 378 SAFKACGNLSDPRVGKQVLGQAFKR--GLASNSSVANSVISMFVKSDRMEDAQRAFESLS 435
Query: 278 NMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKE 337
+ + L +L +I +R L + T+ L + A+ G ++
Sbjct: 436 EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITEREL---GVSAFTFASLLSGVANVGSIRK 492
Query: 338 AVQIRAKMKEAGVQ-KEPGCSSI 359
QI +++ + G+ +P C+++
Sbjct: 493 GEQIHSQVVKLGLSCNQPVCNAL 515
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 132/275 (48%), Gaps = 44/275 (16%)
Query: 72 VFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP-NEVTIVCVLSACSQLG 130
V +R+ V D + + G +R ALDL M RD +RP + VT +L +C +
Sbjct: 22 VSNRINVADRLILRHLNAGDLRGA--VSALDL---MARDGIRPMDSVTFSSLLKSCIRAR 76
Query: 131 ALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK---ERDVTTYNS 187
LG+ +H+ + + I+ + ++ +LI++YS+ GD KA VFE M+ +RDV ++++
Sbjct: 77 DFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSA 136
Query: 188 LIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG-----GLVDLGF----- 237
++A +GR ++A+++F E + G+ P + V+ ACS+ G V LGF
Sbjct: 137 MMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTG 196
Query: 238 -------------EIF----QSMTRDYGI-----EPQIEHYGCIVDLLSRVGRPEEAYDF 275
++F S Y + E + + ++ ++G P EA F
Sbjct: 197 HFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRF 256
Query: 276 ITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQI 307
+M ++ D L S+ SAC L LG+Q+
Sbjct: 257 FLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 150/338 (44%), Gaps = 42/338 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H ++ GL + LV++Y KC
Sbjct: 288 GKQLHSWAIRSGLVDD--VECSLVDMYAKCSA---------------------------- 317
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMA-RALDLFREM-QRDNVRPNEVTI 119
G V++ +VF R++ + WTA+I G ++N +A A++LF EM + +V PN T
Sbjct: 318 -DGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTF 376
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
AC L +G+ + K + N V ++I+M+ + ++ A + FE + E
Sbjct: 377 SSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSE 436
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+++ +YN+ + G + +A ++ E+ + + + TF +L+ ++ G + G +I
Sbjct: 437 KNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQI 496
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACK 296
+ + G+ ++ + S+ G + A ++F+ N + I S+++
Sbjct: 497 HSQVVK-LGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNV----ISWTSMITGFA 551
Query: 297 IHG-KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSG 333
HG +++ E + + + + TYV + +A + G
Sbjct: 552 KHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVG 589
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 34/200 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G +IH QV+KLGL N+ L+ +Y KCG A ++F+ M E +V++ T MI +
Sbjct: 492 KGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFM-ENRNVISWTSMITGF 550
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+HG R L+ F +M + V+PNEVT V
Sbjct: 551 AKHGFA-------------------------------IRVLETFNQMIEEGVKPNEVTYV 579
Query: 121 CVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
+LSACS +G + G R +S H+I ++++ R G + A + M
Sbjct: 580 AILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPF 639
Query: 179 ERDVTTYNSLIAGLAMHGRS 198
+ DV + + + +H +
Sbjct: 640 QADVLVWRTFLGACRVHSNT 659
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 92/201 (45%), Gaps = 8/201 (3%)
Query: 41 FDEMPECNDVVASTVMINCYVEHG---LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEM 97
FD P D V +I+ Y + G E+ FE R +D V W+AM+ NG
Sbjct: 91 FDIEP---DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRE 147
Query: 98 ARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKH-RIDLNHIVGGA 156
A+ +F E + PN+ V+ ACS + +GR ++ K + + VG +
Sbjct: 148 LDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCS 207
Query: 157 LINMYSRC-GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRP 215
LI+M+ + + A +VF++M E +V T+ +I G EA+ F +M+ G
Sbjct: 208 LIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFES 267
Query: 216 TKVTFVGVLNACSHGGLVDLG 236
K T V +AC+ + LG
Sbjct: 268 DKFTLSSVFSACAELENLSLG 288
>gi|224118652|ref|XP_002331415.1| predicted protein [Populus trichocarpa]
gi|222873629|gb|EEF10760.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/435 (43%), Positives = 276/435 (63%), Gaps = 1/435 (0%)
Query: 55 VMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP 114
+++ Y + G + +A +VF VK WT++I G G A AL LF+++ + ++P
Sbjct: 24 LLLGMYAKCGDLISARKVFDMALVKTVFLWTSIIGGYTHMGYPAEALLLFKKLLKTAIKP 83
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
N T+ +LSAC+ LG+L++G+ I Y+ + + V +LI+M+S+CG I KA+ VF
Sbjct: 84 NGATLATILSACADLGSLDMGKEIEEYILSNGFQSDRQVQTSLIHMFSKCGSIGKAISVF 143
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN-QGIRPTKVTFVGVLNACSHGGLV 233
E + ++D+ ++S+I G A+HG + EA+ +F +M+ + I+P V F +L ACSH GLV
Sbjct: 144 ERISDKDLAAWSSMINGYAIHGMAEEALGLFHKMLEIKEIKPDAVVFTSILLACSHVGLV 203
Query: 234 DLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLS 293
+ G + F+SM +D+GI P +EHY C+VDLL R G+ E A I M + + LS
Sbjct: 204 EDGLKFFKSMQKDFGIVPSVEHYMCLVDLLGRAGQFELALKTIRVMPVKLQAQVWAPFLS 263
Query: 294 ACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
AC H L+LGE A++LL YVL++N Y S GKWKEA R+ M + G+ K
Sbjct: 264 ACTKHCNLELGELAARKLLYMNPGSHANYVLMANLYTSMGKWKEAAVTRSLMIDRGLVKA 323
Query: 354 PGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEK 413
PG S +E+N +H FI GD H Q IYKK++E+ + GY P T+ V+HD+E EK
Sbjct: 324 PGWSQVEINGSVHVFIAGDRSHTQSIDIYKKLEEINLKLAEAGYVPETDTVIHDLEREEK 383
Query: 414 EWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNR 473
E AL +HSERLAI +GLIST+ +T+R++KN R C DCHS +K I+ IT R +IVRD +R
Sbjct: 384 EEALKVHSERLAIAFGLISTEAGSTLRIMKNHRTCVDCHSALKFISKITGRHLIVRDGSR 443
Query: 474 FHHFENGTCSCGDYW 488
FHHFE+G C+C D+W
Sbjct: 444 FHHFESGKCTCKDFW 458
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EI +L G +S+R + L+ ++ KCG A+ +F+ + + D+ A + MIN Y
Sbjct: 104 GKEIEEYILSNGFQSDRQVQTSLIHMFSKCGSIGKAISVFERISD-KDLAAWSSMINGYA 162
Query: 62 EHGLVENAFEVFSR-VKVK----DTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPN 115
HG+ E A +F + +++K D V +T+++ G + L F+ MQ+D + P+
Sbjct: 163 IHGMAEEALGLFHKMLEIKEIKPDAVVFTSILLACSHVGLVEDGLKFFKSMQKDFGIVPS 222
Query: 116 EVTIVCVLSACSQLGALELG 135
+C++ + G EL
Sbjct: 223 VEHYMCLVDLLGRAGQFELA 242
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/441 (41%), Positives = 271/441 (61%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
++V + +++ Y + V A VF R+ K+ + WTAMI G +NG A+ +F EM
Sbjct: 310 DNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEM 369
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
QRD ++P++ T+ V+S+C+ L +LE G H + V AL+ +Y +CG I
Sbjct: 370 QRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSI 429
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+ A ++F+EM D ++ +L+ G A G++ E +++F +M+++G++P VTF+GVL+AC
Sbjct: 430 EDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSAC 489
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
S GLVD G F SM +D+ I P +HY C++DL SR G ++A +FI M PD
Sbjct: 490 SRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFG 549
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+LLSAC++ G +++G+ A+ LL + +YVLL + +AS G+W + ++R M++
Sbjct: 550 WATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRD 609
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
V+KEPGCS I+ N++H F D HP IY+K+Q L + EGY P VLHD
Sbjct: 610 RQVKKEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKMVEEGYKPDVSSVLHD 669
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
+ D EK L+ HSE+LAI +GLI P IR+VKNLRVC DCH+ K I+ IT R I+
Sbjct: 670 VADAEKVHMLSHHSEKLAIAFGLIFVPPEMPIRIVKNLRVCVDCHNATKFISKITGRDIL 729
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
VRD RFH F NG CSCGD+W
Sbjct: 730 VRDAVRFHKFSNGICSCGDFW 750
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 195/413 (47%), Gaps = 43/413 (10%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H Q+L+LG + T LV++Y K G DA ++FDEM E +VV MI +
Sbjct: 164 GRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEM-EGKNVVMCNTMITGLL 222
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+V A +F ++ +D++ WT M+ GL +NG + ALD+FR M+ + V ++ T
Sbjct: 223 RCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGS 282
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+AC L ALE G+ IH+Y+ + + N VG AL++MYS+C + A VF M ++
Sbjct: 283 ILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKN 342
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++ ++I G +G EAV +F EM GI+P T V+++C++ ++ G + F
Sbjct: 343 IISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQ-FH 401
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+ G+ P + +V L + G E+A+ M
Sbjct: 402 CLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSF-------------------- 441
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
D ++ L YA GK KE + + KM GV K G + I V
Sbjct: 442 ---------------HDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGV-KPDGVTFIGV 485
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKE 414
+ L D + + MQ+ IV L+ + + + L+ W K+
Sbjct: 486 LSACSRSGLVD----KGRSYFHSMQQDHDIVPLDDHY-TCMIDLYSRSGWLKQ 533
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 93/198 (46%), Gaps = 34/198 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG + H L GLR + LV LYGKCG +DA +LFDEM +D V+ T ++ Y
Sbjct: 396 EGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEM-SFHDQVSWTALVMGY 454
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ G K K+T+ DLF +M V+P+ VT +
Sbjct: 455 AQFG------------KAKETI-------------------DLFEKMLSKGVKPDGVTFI 483
Query: 121 CVLSACSQLGALELGR-WIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
VLSACS+ G ++ GR + HS H I +I++YSR G + +A + ++M
Sbjct: 484 GVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPR 543
Query: 180 -RDVTTYNSLIAGLAMHG 196
D + +L++ + G
Sbjct: 544 CPDAFGWATLLSACRLRG 561
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/441 (40%), Positives = 276/441 (62%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
++V + +++ Y + ++ A VF R+ K+ + WTA+I G +NG A+ +F EM
Sbjct: 305 DNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEM 364
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
QRD + P++ T+ V+S+C+ L +LE G H + V AL+ +Y +CG I
Sbjct: 365 QRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSI 424
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+ A ++F+EM D ++ +L++G A GR+ E +++F +M+ +G++P VTF+GVL+AC
Sbjct: 425 EDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSAC 484
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
S G V+ G F SM +D+GI P +HY C++DL SR G+ +EA +FI M + PD I
Sbjct: 485 SRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIG 544
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
G+LLSAC++ G +++G+ A+ LL+ + +YVLL + +A+ G+W E Q+R M++
Sbjct: 545 WGTLLSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRD 604
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
V+KEPGCS I+ N++H F D HP + IY+K++ L + EGY P VLHD
Sbjct: 605 RQVKKEPGCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSKMLEEGYKPDVSSVLHD 664
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
+ D +K ++ HSE+LAI +GLI IR+VKNLRVC DCH+ K I+ IT R I+
Sbjct: 665 VADTDKVHMVSHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDIL 724
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
VRD RFH F +G CSCGD+W
Sbjct: 725 VRDAVRFHKFSDGVCSCGDFW 745
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 182/383 (47%), Gaps = 44/383 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G++ H Q+L+LG +N LV++Y K DA + FDE+ + +VV MI +
Sbjct: 159 GKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEV-DSKNVVMYNTMITGLL 217
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+VE A +F + +D++ WT M+ G +NG + AL++FR M+ + ++ T
Sbjct: 218 RCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGS 277
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+AC L ALE G+ IH+Y+ + R D N VG AL++MYS+C I A VF M ++
Sbjct: 278 ILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKN 337
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE--- 238
+ ++ +LI G +G S EAV +F EM GI P T V+++C++ ++ G +
Sbjct: 338 IISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHC 397
Query: 239 ------------IFQSMTRDYGIEPQIE---------------HYGCIVDLLSRVGRPEE 271
+ ++ YG IE + +V ++ GR +E
Sbjct: 398 LALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKE 457
Query: 272 AYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT------Y 322
D M + PD + +LSAC G ++ G + D G Y
Sbjct: 458 TIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKG----RSYFHSMQKDHGIVPIDDHY 513
Query: 323 VLLSNAYASSGKWKEAVQIRAKM 345
+ + Y+ SGK KEA + +M
Sbjct: 514 TCMIDLYSRSGKLKEAEEFIKQM 536
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 169/339 (49%), Gaps = 22/339 (6%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
L+ YGK G A ++FD MP N + +++ L+ + +F+ + +D V
Sbjct: 47 LLTAYGKAGRHARARRVFDAMPHPN-LFTYNALLSTLAHARLLSDMEALFASMTQRDIVS 105
Query: 84 WTAMIDGLVRNGEMARALDLFREM-QRDN-VRPNEVTIVCVLSACSQLGALELGRWIHSY 141
+ A+I G G A+A+ ++ + Q D+ VRP+ +T+ ++ A S LG LG+ H
Sbjct: 106 YNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQ 165
Query: 142 MGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEA 201
+ + N VG L++MY++ + A + F+E+ ++V YN++I GL EA
Sbjct: 166 ILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEA 225
Query: 202 VEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVD 261
+F M ++ +T+ ++ + GL EIF+ M R GI +G I+
Sbjct: 226 RRLFEVMTDR----DSITWTTMVTGFTQNGLESEALEIFRRM-RFQGIAIDQYTFGSILT 280
Query: 262 ---LLSRVGRPEEAYDFITNMKIAPDHIMLGSLL----SACKIHGKLQLGEQIAKRLLDC 314
LS + + ++ + +I + D++ +GS L S C+ ++L E + +R + C
Sbjct: 281 ACGALSALEQGKQIHAYIIRTRY-DDNVFVGSALVDMYSKCR---SIKLAETVFRR-MTC 335
Query: 315 RSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
++ S T +++ Y +G +EAV++ ++M+ G+ +
Sbjct: 336 KNIISWTALIV--GYGQNGCSEEAVRVFSEMQRDGIDPD 372
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 93/198 (46%), Gaps = 34/198 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG + H L GL + LV LYGKCG +DA +LFDEM +D V+ T +++ Y
Sbjct: 391 EGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEM-SFHDQVSWTALVSGY 449
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ G + K+T+ DLF +M V+P+ VT +
Sbjct: 450 AQFG------------RAKETI-------------------DLFEKMLAKGVKPDGVTFI 478
Query: 121 CVLSACSQLGALELGR-WIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
VLSACS+ G +E GR + HS H I +I++YSR G + +A + ++M
Sbjct: 479 GVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPM 538
Query: 179 ERDVTTYNSLIAGLAMHG 196
D + +L++ + G
Sbjct: 539 HPDAIGWGTLLSACRLRG 556
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/480 (38%), Positives = 277/480 (57%), Gaps = 33/480 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++H LK G +S+ LV++Y +CG A FD MP
Sbjct: 208 GTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMP---------------- 251
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K V W A+I G R GE AL L +MQR N +P T
Sbjct: 252 ----------------TKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSS 295
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLSAC+ +GALE G+W+H++M K + L +G L++MY++ G ID A +VF+ + + D
Sbjct: 296 VLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPD 355
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++N+++ G A HG E ++ F +M+ GI P +++F+ VL ACSH GL+D G F+
Sbjct: 356 VVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFE 415
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M + Y +EP + HY VDLL RVG + A FI M I P + G+LL AC++H +
Sbjct: 416 LMKK-YKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNM 474
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LG A+R + DSG +LLSN YAS+G+W++ ++R MKE+GV+K+P CS +E+
Sbjct: 475 ELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEI 534
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N +H F+ D HP+ ++I K +E+ +K GY P T VL ++ E+E L HS
Sbjct: 535 ENAVHLFVANDETHPRIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHS 594
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LA+ + L++T + IR+ KN+RVC DCH+ IK ++ + R+IIVRD NRFH F +G+
Sbjct: 595 EKLALAFALLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKVVDREIIVRDTNRFHRFRDGS 654
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 136/264 (51%), Gaps = 5/264 (1%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
N +V +++N Y + G +++A +F + KD V WTA+I G +N AL LF +M
Sbjct: 121 NHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQM 180
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
R +PN T+ +L A L+ G +H++ K+ + VG AL++MY+RCG +
Sbjct: 181 LRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHM 240
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
D A F+ M + ++N+LI+G A G A+ + +M + +PT T+ VL+AC
Sbjct: 241 DAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSAC 300
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
+ G ++ G + M + G++ ++D+ ++ G ++A + + PD +
Sbjct: 301 ASIGALEQGKWVHAHMIKS-GLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRL-VKPDVVS 358
Query: 288 LGSLLSACKIHGKLQLGEQIAKRL 311
++L+ C HG LG++ R
Sbjct: 359 WNTMLTGCAQHG---LGKETLDRF 379
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 130/257 (50%), Gaps = 13/257 (5%)
Query: 100 ALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM-GKHRIDLNHIVGGALI 158
ALDL +QR ++ P+ +L C++LG +E GR +H+++ H +D + ++ ++
Sbjct: 74 ALDL---IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIV 130
Query: 159 NMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKV 218
NMY++CG +D A ++F+EM +D+ T+ +LIAG + + R +A+ +F +M+ G +P
Sbjct: 131 NMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHF 190
Query: 219 TFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITN 278
T +L A +D G ++ + YG + + +VD+ +R G + A
Sbjct: 191 TLSSLLKASGSEHGLDPGTQL-HAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDG 249
Query: 279 MKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSAD----SGTYVLLSNAYASSGK 334
M + + +L+S H + GE L + + TY + +A AS G
Sbjct: 250 MPTKSE-VSWNALISG---HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGA 305
Query: 335 WKEAVQIRAKMKEAGVQ 351
++ + A M ++G++
Sbjct: 306 LEQGKWVHAHMIKSGLK 322
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 37/198 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ +H ++K GL+ L+++Y K G DA ++FD + + DVV+ M+
Sbjct: 308 QGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKP-DVVSWNTMLTGC 366
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+HGL + LD F +M R + PNE++ +
Sbjct: 367 AQHGLGK-------------------------------ETLDRFEQMLRIGIEPNEISFL 395
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRI--DLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
CVL+ACS G L+ G + M K+++ D+ H V +++ R G +D+A + EM
Sbjct: 396 CVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYV--TFVDLLGRVGLLDRAERFIREMP 453
Query: 179 -ERDVTTYNSLIAGLAMH 195
E + +L+ MH
Sbjct: 454 IEPTAAVWGALLGACRMH 471
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/537 (34%), Positives = 311/537 (57%), Gaps = 51/537 (9%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN------------- 48
G+ +H +K + L+++Y KCG+ A+++F++M E N
Sbjct: 270 GKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTR 329
Query: 49 ---------------------DVVASTVMINCYVEHGLVENAFEVFSRVKVKDT-----V 82
DVVA+T +++ G ++N +V +K + V
Sbjct: 330 DGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFV 389
Query: 83 CWTAMIDGLVRNGEMARALDLFREMQRDNV----------RPNEVTIVCVLSACSQLGAL 132
C A++D + G M A +F M ++ +P+ T+ C+L AC+ L AL
Sbjct: 390 C-NALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGELKPDSRTMACILPACASLSAL 448
Query: 133 ELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGL 192
E G+ IH Y+ ++ + V AL+++Y +CG + A +F+ + +D+ ++ +I+G
Sbjct: 449 ERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGY 508
Query: 193 AMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQ 252
MHG EA+ F EM + GI P +V+F+ +L ACSH GL++ G+ F M D+ IEP+
Sbjct: 509 GMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPK 568
Query: 253 IEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
+EHY C+VDLLSR G +AY+FI + IAPD + G+LL C+I+ ++L E++A+R+
Sbjct: 569 LEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVF 628
Query: 313 DCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILG- 371
+ ++G YVLL+N YA + KW+E ++R K+ + G++K PGCS IE+ +++ F+ G
Sbjct: 629 ELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGKVNLFVSGN 688
Query: 372 DIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLI 431
+ HP ++I ++++++ +K EGY P T+ L + ++ +KE AL HSE+LA+ +GL+
Sbjct: 689 NSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLL 748
Query: 432 STKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
+ P T+RV KNLRVC DCH M K ++ T+R+I++RD NRFHHF+NG CSC +W
Sbjct: 749 ALPPRKTVRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKNGYCSCRGFW 805
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 193/417 (46%), Gaps = 65/417 (15%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN------------ 48
+G+++H + + + LKLV LY CG+ K+ ++FD M + N
Sbjct: 117 DGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYA 176
Query: 49 ---DVVASTVMINCYVEHGL----VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARAL 101
D S + VE G+ E+A E+F ++ +D + W +MI G V NG R L
Sbjct: 177 KIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGL 236
Query: 102 DLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMY 161
+++++M + + TI+ VL C+ G L LG+ +HS K + L++MY
Sbjct: 237 EIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMY 296
Query: 162 SRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFV 221
S+CGD+D AL+VFE+M ER+V ++ S+IAG GRS A+ + ++M +G++ V
Sbjct: 297 SKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATT 356
Query: 222 GVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM-- 279
+L+AC+ G +D G ++ + + +E + ++D+ ++ G + A + M
Sbjct: 357 SILHACARSGSLDNGKDVHDYIKAN-NMESNLFVCNALMDMYTKCGSMDGANSVFSTMVV 415
Query: 280 -----------KIAPDHIMLGSLLSACKIHGKLQLGEQI--------------------- 307
++ PD + +L AC L+ G++I
Sbjct: 416 KDIISWNTMIGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVD 475
Query: 308 ----------AKRLLD-CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
A+ L D S D ++ ++ + Y G EA+ +M++AG++ +
Sbjct: 476 LYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPD 532
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 125/287 (43%), Gaps = 58/287 (20%)
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
+ A I + G + A++L Q+ + T VL C+ +L G+ +HS +
Sbjct: 69 YNAKILHFCQLGNLENAMELVCMCQKSELETK--TYSSVLQLCAGSKSLTDGKKVHSIIK 126
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
+ + ++ ++G L+++Y+ CGD+ + +VF+ M++++V +N +++ A G E++
Sbjct: 127 SNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESIC 186
Query: 204 MFREMINQGI---RPTK-------------VTFVGVLNACSHGGLVDLGFEIFQSMTRDY 247
+F+ M+ +GI RP +++ +++ GL + G EI++
Sbjct: 187 LFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYK------ 240
Query: 248 GIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQI 307
Q+ + G VDL + + S+L C G L LG+ +
Sbjct: 241 ----QMMYLGIDVDLATII-----------------------SVLVGCANSGTLSLGKAV 273
Query: 308 ----AKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
K + R S T L + Y+ G A+++ KM E V
Sbjct: 274 HSLAIKSTFERRINFSNT---LLDMYSKCGDLDGALRVFEKMGERNV 317
>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
Length = 830
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/439 (42%), Positives = 276/439 (62%), Gaps = 4/439 (0%)
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
+T +I+CY + G+V A VF+ + ++ V W+AMI +N A+ +F+EM +
Sbjct: 393 ATTLIDCYAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDA 452
Query: 113 R--PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
PN +TIV VL AC+ + AL G+ +H+Y+ + DL V AL+ MY +CG ++
Sbjct: 453 DLVPNSITIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETG 512
Query: 171 LQVFEEM-KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH 229
+F + + R+V ++NSLI+G MHG E++++F EMI +GI P +TFV VL ACSH
Sbjct: 513 RYIFNWIGRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSH 572
Query: 230 GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLG 289
GLV+ G ++F+SM +Y + P+ EHY C+VDLL R GR +EA + I +M+I P + G
Sbjct: 573 VGLVEQGKKLFESMV-EYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQVWG 631
Query: 290 SLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
SLL AC+IHG ++ E L D ++G YVLL++ YA + + ++ ++E
Sbjct: 632 SLLGACRIHGHVEYAEMACSHLFDLEPRNAGNYVLLADIYARAKLQNQVDVLKELLEEHA 691
Query: 350 VQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIE 409
++K PGCS IEV +++ F+ D ++PQ E++ + E +K EGY P T VL+DIE
Sbjct: 692 LEKVPGCSWIEVKKKLYSFVSVDNKNPQVEELQALIGEFVTQMKNEGYVPDTRSVLYDIE 751
Query: 410 DWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVR 469
+ EKE L HSE+LA+ +GLI T IR+ KNLR+C DCHS+ K I+ T R+I+VR
Sbjct: 752 EEEKERILLGHSEKLAVAFGLIKTGSGEAIRITKNLRLCEDCHSVTKFISKFTDREIVVR 811
Query: 470 DRNRFHHFENGTCSCGDYW 488
D NRFHHF NG CSC DYW
Sbjct: 812 DVNRFHHFRNGVCSCRDYW 830
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 33/205 (16%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ +H +L+ G S L+ +Y KCG + +F+ + +VV+ +I+ Y
Sbjct: 476 QGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGY 535
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG F R +L +F EM + + PN +T V
Sbjct: 536 GMHG--------FGR-----------------------ESLQVFEEMIEEGISPNIITFV 564
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VL ACS +G +E G+ + M ++ + ++++ R G +D+A+++ + M+ +
Sbjct: 565 SVLGACSHVGLVEQGKKLFESMVEYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQ 624
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEM 204
+ SL+ +HG +E EM
Sbjct: 625 PSPQVWGSLLGACRIHGH-VEYAEM 648
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/488 (38%), Positives = 282/488 (57%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G +IH +V G ++ S LV LY +CG
Sbjct: 464 QGSQIHARVYVSGYSADVSIWNGLVYLYARCG---------------------------- 495
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ + AF F ++ K+ + W +I G ++G AL +F +M + + N T V
Sbjct: 496 ----ISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFV 551
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+SA + L ++ G+ IH+ + K + ALI++Y +CG I+ A F EM +R
Sbjct: 552 SSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKR 611
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+ ++N++I + HGR +EA+++F +M QG++P+ VTFVGVL ACSH GLV+ G F
Sbjct: 612 NEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYF 671
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+SM+ ++GI P+ +HY C+VD+L R G+ + A F+ M I D ++ +LLSACK+H
Sbjct: 672 KSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKN 731
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
L++GE AK LL+ DS +YVLLSNAYA +GKW QIR MK+ GV+KEPG S IE
Sbjct: 732 LEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIE 791
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
V N +H F +GD HP +QIY + L + GY + H+ E K+ +H
Sbjct: 792 VKNVVHAFFVGDRLHPLADQIYNFLSHLNDRLYKIGYKQENYHLFHEKEKEGKDPTAFVH 851
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LA+ +GL+S +RV+KNLRVCNDCH+ +K + + R+I++RD RFHHF NG
Sbjct: 852 SEKLAVAFGLMSLPSCMPLRVIKNLRVCNDCHTWMKFTSGVMGREIVLRDVYRFHHFNNG 911
Query: 481 TCSCGDYW 488
+CSCGDYW
Sbjct: 912 SCSCGDYW 919
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 170/372 (45%), Gaps = 68/372 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR IH QV K G S L+ LY +C F+ A ++F +M C
Sbjct: 162 GRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYC-------------- 207
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
D+V + +I G + G RAL +F EMQ + P+ VTI
Sbjct: 208 ------------------DSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIAS 249
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+ACS +G L G+ +HSY+ K + L++I+ G+L+++Y + GDI++ALQ+F+ +
Sbjct: 250 LLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTN 309
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +N ++ ++ ++F M+ G+RP K T+ +L C+H G + LG +I
Sbjct: 310 VVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQI-H 368
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVG---RPEEAYDFI--------TNM----------- 279
S+T G + + G ++D+ S+ G + + D I T+M
Sbjct: 369 SLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCK 428
Query: 280 ------------KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL-LDCRSADSGTYVLLS 326
I PD+I L S +SAC + G QI R+ + SAD + L
Sbjct: 429 EALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLV 488
Query: 327 NAYASSGKWKEA 338
YA G KEA
Sbjct: 489 YLYARCGISKEA 500
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 162/346 (46%), Gaps = 8/346 (2%)
Query: 13 GLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMINCYVEHGLVENA 69
GL + T L+ G+ + QL + + D + +++ YV+ G +E A
Sbjct: 239 GLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEA 298
Query: 70 FEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQL 129
++F + V W M+ + ++A++ D+F M VRPN+ T C+L C+
Sbjct: 299 LQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHT 358
Query: 130 GALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLI 189
G + LG IHS K+ + V G LI+MYS+ G +DKA ++ + ++E+DV ++ S+I
Sbjct: 359 GEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMI 418
Query: 190 AGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGI 249
AG H EA+E F+EM GI P + ++AC+ V G +I + G
Sbjct: 419 AGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVS-GY 477
Query: 250 EPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAK 309
+ + +V L +R G +EA+ ++ + I L+S G + ++
Sbjct: 478 SADVSIWNGLVYLYARCGISKEAFSSFEAIE-HKEGITWNGLISGFAQSGLYEEALKVFM 536
Query: 310 RLLDCRSADSGTYVLLSNAYASS--GKWKEAVQIRAKMKEAGVQKE 353
+ +D A + +S+ AS+ K+ QI A++ + G E
Sbjct: 537 K-MDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSE 581
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 132/296 (44%), Gaps = 45/296 (15%)
Query: 51 VASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD 110
+ ++I+ Y + G V A VF + V+D V W A++ G +NG A+ L+REM R
Sbjct: 78 IIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRS 137
Query: 111 NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
V P + +LSAC++ +LGR IH + K VG ALI++Y RC A
Sbjct: 138 GVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLA 197
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
+VF +M D T+N+LI+G A G A+ +F EM G+ P VT +L ACS
Sbjct: 198 DRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAV 257
Query: 231 GLVDLGFEIFQ-----SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA------------- 272
G + G ++ M+ DY +E G ++DL + G EEA
Sbjct: 258 GDLRKGKQLHSYLLKAGMSLDYIME------GSLLDLYVKSGDIEEALQIFDSGDRTNVV 311
Query: 273 ------------------YDFITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQI 307
+D M A P+ +L C G++ LGEQI
Sbjct: 312 LWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQI 367
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/459 (39%), Positives = 283/459 (61%), Gaps = 6/459 (1%)
Query: 35 KDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKV--KDTVCWTAMIDGLV 92
K L +E D + +N Y + G + +A VF R+ +D + W +M+
Sbjct: 478 KRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYG 537
Query: 93 RNGEMARALDLFREMQRDN-VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH 151
+G A +LF+ M+ + V+PN+VT V VL A + ++ GR IH+ + + + +
Sbjct: 538 HHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDT 597
Query: 152 IVGGALINMYSRCGDIDKALQVFEEMK--ERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
++ AL+NMY++CG +D A +F++ + DV + SLIAG A +G++ A+++F M
Sbjct: 598 VIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQ 657
Query: 210 NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRP 269
QG+RP VTF+ L AC+HGG ++ G E+ MT D+GI P +H+ CIVDLL R GR
Sbjct: 658 QQGVRPNHVTFISALTACNHGGKLEQGCELLSGMTPDHGILPASKHFSCIVDLLGRCGRL 717
Query: 270 EEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAY 329
+EA + A D I +LL ACK +L+ GE+ A+R++ + +Y++L++ Y
Sbjct: 718 DEAEKLLERTSQA-DVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMY 776
Query: 330 ASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELK 389
A++G+W EA IR M + G++ +PGCS++EVN E+H F GD HP+ E+IY +++ L
Sbjct: 777 AAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLH 836
Query: 390 QIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCN 449
+K GY T +VLHD+ KE L HSE+LAI +GL+ST + +RV+KNLRVC+
Sbjct: 837 WSIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCS 896
Query: 450 DCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
DCH+ KLI+ +T R I++RD +R+HHF +GTCSCGDYW
Sbjct: 897 DCHTATKLISKVTGRDILMRDSSRYHHFTSGTCSCGDYW 935
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 150/312 (48%), Gaps = 47/312 (15%)
Query: 1 EGREIHGQVL--KLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMIN 58
+G+ +H +L ++ L ++ L+ ++ KCG +A L D V + T MI
Sbjct: 61 QGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALADRFAS---VYSCTAMIR 117
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVT 118
++EHG + A E+F R++ VRPN
Sbjct: 118 AWMEHGRPDKAMELFDRME----------------------------------VRPNCHA 143
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM- 177
++ +++ACS LG L GR IHS + + N ++G ALI+MYS+CG + A Q F+ +
Sbjct: 144 LIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLP 203
Query: 178 --KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGI-RPTKVTFVGVLNACSHGGLVD 234
+RDV T+N++I+ +G + EA+++FR+M G P VTFV VL++C GL+
Sbjct: 204 RASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLS 263
Query: 235 L-GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYD-FITNMKIAPDHIML--GS 290
L GIE + +VD ++G ++A++ F+ P ++ +
Sbjct: 264 LEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSA 323
Query: 291 LLSACKIHGKLQ 302
++SAC +G Q
Sbjct: 324 MISACWQNGWPQ 335
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 106/234 (45%), Gaps = 36/234 (15%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR IH Q+ N L+ +Y KCG DA Q FD +P
Sbjct: 160 GRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLP---------------- 203
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV-RPNEVTIV 120
R +D V W AMI +RNG AL LFR+M RD PN VT V
Sbjct: 204 -------------RASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFV 250
Query: 121 CVLSACSQLGALELG--RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF---- 174
VL +C + G L L R IH + I+ V AL++ Y + G +D A +VF
Sbjct: 251 SVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKG 310
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+E + T +++I+ +G E++ +F M +G +P+ VT V VLNACS
Sbjct: 311 DEEPSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACS 364
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 41/307 (13%)
Query: 39 QLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMA 98
Q + + D V T ++ Y + A F ++ D V W AM +++
Sbjct: 378 QAMEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSR 437
Query: 99 RALDLFREMQRDNVRPNEVTIVCVLSACSQL---GALELGRWIHSYMGKHRIDLNHIVGG 155
AL LF M + VRP+ T + L+AC+ A +G+ I S + + ++ + V
Sbjct: 438 EALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVAN 497
Query: 156 ALINMYSRCGDIDKALQVFEEMK--ERDVTTYNSLIAGLAMHGRSIEAVEMFREM-INQG 212
A +NMY++CG + A VFE + RD T+NS++A HG EA E+F+ M +
Sbjct: 498 ATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKL 557
Query: 213 IRPTKVTFVGVLNACS-----------HGGLVDLGFE----IFQSMTRDYGIEPQIEHYG 257
++P KVTFV VL+A + H +V GFE I ++ Y ++
Sbjct: 558 VKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQ 617
Query: 258 CIVDLLS-----------------RVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKI 297
I D S + G+ E A M+ + P+H+ S L+AC
Sbjct: 618 AIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNH 677
Query: 298 HGKLQLG 304
GKL+ G
Sbjct: 678 GGKLEQG 684
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 140/308 (45%), Gaps = 46/308 (14%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLF----DEMPECNDVVASTVMIN 58
R IHG+++ G+ R LV+ YGK G DA ++F DE P ST ++
Sbjct: 268 RAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEP-------STSLVT 320
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVT 118
C +AMI +NG +L LF M + +P+ VT
Sbjct: 321 C-------------------------SAMISACWQNGWPQESLRLFFAMNLEGTKPSGVT 355
Query: 119 IVCVLSACSQLGALELGRWI-HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+V VL+ACS L ++ M ++++G L+ Y+R D+ +A F+ +
Sbjct: 356 LVSVLNACSMLQVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAI 415
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH---GGLVD 234
+ DV ++N++ A H RS EA+ +F M+ +G+RP+ TF+ L AC+
Sbjct: 416 QSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASA 475
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAP---DHIMLGSL 291
+G I QS+ + G+E +++ ++ G +A +I+P D I S+
Sbjct: 476 IGKRI-QSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFE--RISPARRDCITWNSM 532
Query: 292 LSACKIHG 299
L+A HG
Sbjct: 533 LAAYGHHG 540
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 89/191 (46%), Gaps = 33/191 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN-DVVASTVMINC 59
+GREIH +V+ G S+ + L+ +Y KCG DA +FD+ DV+A T +I
Sbjct: 580 QGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAG 639
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
Y ++G E RAL LF MQ+ VRPN VT
Sbjct: 640 YAQYGQAE-------------------------------RALKLFWTMQQQGVRPNHVTF 668
Query: 120 VCVLSACSQLGALELGRWIHSYMGK-HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
+ L+AC+ G LE G + S M H I ++++ RCG +D+A ++ E
Sbjct: 669 ISALTACNHGGKLEQGCELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERTS 728
Query: 179 ERDVTTYNSLI 189
+ DV T+ +L+
Sbjct: 729 QADVITWMALL 739
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 148/366 (40%), Gaps = 80/366 (21%)
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDL-NH-IVGGALINMYSRCGDIDKALQVFE 175
T C+L AC +L AL+ G+ +H+++ RIDL NH + LI M+++CG++ +A E
Sbjct: 45 TYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEA----E 100
Query: 176 EMKERDVTTYN--SLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV 233
+ +R + Y+ ++I HGR +A+E+F M +RP + ++NACS G +
Sbjct: 101 ALADRFASVYSCTAMIRAWMEHGRPDKAMELFDRM---EVRPNCHALIALVNACSCLGNL 157
Query: 234 DLGFEIFQSMT-RDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
G I ++ RD+ E + N I S+
Sbjct: 158 AAGRRIHSQISDRDF-----------------------EENSVLGNALI--------SMY 186
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
S C G L +Q RL D T+ + +A+ +G +EA+Q+ M G
Sbjct: 187 SKC---GSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPP 243
Query: 353 --------------EPGCSSIEVNNEIHEFILGDIRHPQREQI--------YKKMQELKQ 390
E G S+E IH I+G +RE Y K+ L
Sbjct: 244 PNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVG--AGIEREAFVRTALVDSYGKLGSLDD 301
Query: 391 ----IVKLEGYSPSTEVVLHDI---EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVK 443
++ PST +V W+ W S RL L TKP + + +V
Sbjct: 302 AWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQ--ESLRLFFAMNLEGTKP-SGVTLVS 358
Query: 444 NLRVCN 449
L C+
Sbjct: 359 VLNACS 364
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/471 (39%), Positives = 295/471 (62%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H V + G+ ++ + + L+++Y KCG+F A Q+FD + + +I+ Y
Sbjct: 258 GRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYC 317
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+HG V+ A +F ++V+D + + +M+ G + +G++ AL LF M+R ++R + T+V
Sbjct: 318 KHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVN 377
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+AC+ LGAL+ GR +H+ + + ++ + +G AL++MY +CG +D+A VF+ M +RD
Sbjct: 378 LLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRD 437
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V T+ ++IAGLA +G A+E F +M G +P V+++ VL ACSH L++ G F
Sbjct: 438 VHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFD 497
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M Y I PQIEHYGC++DLL R G +EA D + M I P+ ++ S+LSAC++H +
Sbjct: 498 EMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHI 557
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
L + A+ LL + G YV L N Y S +W+ A +IR M+E V+K G SSI V
Sbjct: 558 DLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSSITV 617
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
++H+F++ D HP+ +I ++E+ +K GYSP T + D+++ EKE AL HS
Sbjct: 618 AGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSLGYSPLTSQITVDVDEEEKEQALLAHS 677
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRN 472
E+LAI +GLI+ P + + KNLRVC DCHS IKLI+ + R+IIVRDR+
Sbjct: 678 EKLAIAFGLINLAPNLPVHIRKNLRVCEDCHSAIKLISRLWNREIIVRDRS 728
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 137/282 (48%), Gaps = 34/282 (12%)
Query: 23 KLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTV 82
L+ +Y + G DA + FDE+ D VA T++I+ + G++ + + S+ V+D +
Sbjct: 147 SLIHMYIRLGLAADARRAFDEI-HVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVI 205
Query: 83 CWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM 142
WT++I R A+ F+ M + P+EVT++ VLSAC++L LELGR +H +
Sbjct: 206 SWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLV 265
Query: 143 GKHRIDLNHIVGGALINMYSRCGDIDKALQV----------------------------- 173
+ + + + ALI+MY++CGD A QV
Sbjct: 266 EEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVA 325
Query: 174 ---FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
F+EM+ RD+ T+NS++ G G+ EA+ +F M +R T V +L AC+
Sbjct: 326 RSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASL 385
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
G + G + + + +E I ++D+ + GR +EA
Sbjct: 386 GALQQGRALHACIEQRL-VEADIYLGTALLDMYMKCGRVDEA 426
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 134/328 (40%), Gaps = 42/328 (12%)
Query: 56 MINCYVEHGL-VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP 114
++NC H L + A +F R+ + TA+ + R LFR M+R VRP
Sbjct: 42 LVNCLEPHPLHLRYALHLFDRMPPSTFLFDTALRACSRAGSDPHRPFLLFRRMRRAGVRP 101
Query: 115 NEVTIVCVLS---ACSQLGALELGRWIHSYMGKHRI-DLNHIVGGALINMYSRCGDIDKA 170
+ T + + S+ +L L +H+ + + V +LI+MY R G A
Sbjct: 102 DGFTFHFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADA 161
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHG-------------------------------RSI 199
+ F+E+ +D + LI+GLA G R+
Sbjct: 162 RRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAR 221
Query: 200 EAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI 259
EAV F+ M++ GI P +VT + VL+AC+ ++LG + + + G+ +
Sbjct: 222 EAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSL-HLLVEEKGMPTSENLVVAL 280
Query: 260 VDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD-CRSAD 318
+D+ ++ G A + P +++ HG + +A+ L D D
Sbjct: 281 IDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHV----DVARSLFDEMEVRD 336
Query: 319 SGTYVLLSNAYASSGKWKEAVQIRAKMK 346
T+ + Y SG+ +EA+ + M+
Sbjct: 337 IITFNSMMTGYIHSGQLREALLLFMSMR 364
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/488 (39%), Positives = 285/488 (58%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG++IH +++ + N L+++Y KC K Y
Sbjct: 288 EGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVK------------------------Y 323
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
E VF +++ K+ + WTAM+ G +NG A+ +F +MQR+ + P++ T+
Sbjct: 324 AE--------AVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLG 375
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+S+C+ L +LE G H + V ALI +Y +CG ++ A Q+F EMK R
Sbjct: 376 SVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIR 435
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++ +L++G A G++ E + +F M+ GI P VTFVGVL+ACS GLV+ G+ F
Sbjct: 436 DEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYF 495
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+ M +++ I P +HY C++DLLSR GR EEA +FI M +PD I +LLS+C+++G
Sbjct: 496 ECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGN 555
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
L++G+ A+ L + +Y+LLS+ YA+ GKW + ++R M+E GV+KEPG S I+
Sbjct: 556 LEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIK 615
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
N++H F D P +QIY K++ L + EGY P VLHD+E EK L H
Sbjct: 616 YKNKVHIFSADDRSSPFSDQIYAKLESLYLKMIEEGYVPDMSFVLHDVEKSEKIKMLNHH 675
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI +GL+ IRVVKNLRVC DCH+ K I+ IT+R+I+VRD RFH F++G
Sbjct: 676 SEKLAIAFGLLFIPDGLQIRVVKNLRVCGDCHNATKYISRITQREILVRDAVRFHLFKDG 735
Query: 481 TCSCGDYW 488
CSCGD+W
Sbjct: 736 VCSCGDFW 743
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 158/299 (52%), Gaps = 3/299 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+IHGQ+ K G +S LV++Y K G DA ++F+E+PE N VV +T MI +
Sbjct: 157 GRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNT-MITGLL 215
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ A ++F + KD++ WT +I GL +NG A+D F+EM + ++ T
Sbjct: 216 RCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGS 275
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL+AC AL+ G+ IH+Y+ + N VG AL++MY +C ++ A VF +M+ ++
Sbjct: 276 VLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKN 335
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ +++ G +G S EAV +F +M I P T V+++C++ ++ G + F
Sbjct: 336 VISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQ-FH 394
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
G+ + ++ L + G E A+ MKI D + +L+S GK
Sbjct: 395 GQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIR-DEVSWTALVSGYAQFGK 452
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 181/416 (43%), Gaps = 80/416 (19%)
Query: 7 GQVLKLGLR-----SNRSTRL--KLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINC 59
QV KL R +N T L L+ YGK G+ K+A +FD +P+ N + + +++
Sbjct: 22 AQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPN-LFSWNTLLSA 80
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVT 118
Y + G +++ VF + D V W +++ G NG ++ ++ ++ M +D +V N +T
Sbjct: 81 YSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRIT 140
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
+L S G ++LGR IH + K VG L++MY++ G I+ A ++FEE+
Sbjct: 141 FSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIP 200
Query: 179 ERDVTTYNSL-------------------------------IAGLAMHGRSIEAVEMFRE 207
E+++ YN++ I GL +G EAV+ F+E
Sbjct: 201 EKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKE 260
Query: 208 MINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR-DY------------------- 247
M +G + TF VL AC +D G +I + R DY
Sbjct: 261 MGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRN 320
Query: 248 -----GIEPQIEHYGCIVDLLSRV-----GRPEEAYDFITNMK---IAPDHIMLGSLLSA 294
+ ++ H I V G EEA +M+ I PD LGS++S+
Sbjct: 321 VKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISS 380
Query: 295 CKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNA----YASSGKWKEAVQIRAKMK 346
C L+ G Q + L ++ +V +SNA Y G + A Q+ +MK
Sbjct: 381 CANLASLEEGAQFHGQAL---ASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMK 433
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/486 (37%), Positives = 286/486 (58%), Gaps = 32/486 (6%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
++IH +K G+ S+ L++ YGKC +A ++F+E
Sbjct: 405 KQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTW---------------- 448
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
+D V +T+MI + G+ AL L+ +MQ +++P+ +
Sbjct: 449 ----------------EDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSL 492
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
L+AC+ L A E G+ +H + K + +L+NMY++CG I+ A + F E+ R +
Sbjct: 493 LNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGI 552
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
+++++I G A HG EA+ +F +M+ G+ P +T V VL AC+H GLV+ G + F+
Sbjct: 553 VSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEK 612
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
M +GI+P EHY C++DLL R G+ EA + + ++ D + G+LL A +IH ++
Sbjct: 613 MEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIE 672
Query: 303 LGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVN 362
LG++ AK L D SGT+VLL+N YAS+G W+ ++R MK++ V+KEPG S IE+
Sbjct: 673 LGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIK 732
Query: 363 NEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSE 422
++++ FI+GD H + ++IY K+ +L ++ GYS E+ +H+++ EKE L HSE
Sbjct: 733 DKVYTFIVGDRSHSRSDEIYAKLDQLGDLLSKAGYSSIVEIDIHNVDKSEKEKLLYHHSE 792
Query: 423 RLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTC 482
+LA+ +GLI+T P IRV KNLR+C DCH+ K + I R+IIVRD NRFHHF++G+C
Sbjct: 793 KLAVAFGLIATPPGGPIRVKKNLRICVDCHTFFKFVCKIVSREIIVRDINRFHHFKDGSC 852
Query: 483 SCGDYW 488
SCGDYW
Sbjct: 853 SCGDYW 858
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 141/311 (45%), Gaps = 69/311 (22%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEF----------------------------- 34
E+H ++K G + S R LV LY KC F
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61
Query: 35 --KDAMQLFDEM----PECNDVVASTVMINC----------------------------- 59
++A+ +F+EM +CN+ +V+ C
Sbjct: 62 FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVAN 121
Query: 60 -----YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP 114
Y + GL++++ +F + ++ V W A+ V++ A+ LF+EM R + P
Sbjct: 122 TLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMP 181
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
NE +I +L+AC+ L +LGR IH M K +DL+ AL++MYS+ G+I+ A+ VF
Sbjct: 182 NEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVF 241
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
+++ DV ++N++IAG +H + A+ + EM G RP T L AC+ G +
Sbjct: 242 QDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKE 301
Query: 235 LGFEIFQSMTR 245
LG ++ S+ +
Sbjct: 302 LGRQLHSSLIK 312
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 165/386 (42%), Gaps = 72/386 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+IHG +LK+GL ++ + LV++Y K GE
Sbjct: 202 GRKIHGLMLKMGLDLDQFSANALVDMYSKAGE---------------------------- 233
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+E A VF + D V W A+I G V + AL L EM+ RPN T+
Sbjct: 234 ----IEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSS 289
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
L AC+ +G ELGR +HS + K + L++MYS+C +D A + ++ M ++D
Sbjct: 290 ALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKD 349
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HG 230
+ +N+LI+G + G ++AV +F +M ++ I + T VL + + H
Sbjct: 350 IIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHT 409
Query: 231 GLVDLG----FEIFQSMTRDYGIEPQIEH---------------YGCIVDLLSRVGRPEE 271
+ G F + S+ YG I+ Y ++ S+ G EE
Sbjct: 410 ISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEE 469
Query: 272 AYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQI----AKRLLDCRSADSGTYVL 324
A M+ I PD + SLL+AC + G+Q+ K C S + V
Sbjct: 470 ALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLV- 528
Query: 325 LSNAYASSGKWKEAVQIRAKMKEAGV 350
N YA G ++A + +++ G+
Sbjct: 529 --NMYAKCGSIEDADRAFSEIPNRGI 552
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 190/449 (42%), Gaps = 81/449 (18%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H ++K+ S+ + LV++Y KC DA + +D MP+
Sbjct: 303 GRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPK--------------- 347
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
KD + W A+I G + G+ A+ LF +M +++ N+ T+
Sbjct: 348 -----------------KDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLST 390
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL + + L A+++ + IH+ K I + V +L++ Y +C ID+A ++FEE D
Sbjct: 391 VLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWED 450
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HG 230
+ Y S+I + +G EA++++ +M + I+P +LNAC+ H
Sbjct: 451 LVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHV 510
Query: 231 GLVDLGF--EIFQSMT---------------RDYGIEPQ--IEHYGCIVDLLSRVGRPEE 271
+ GF +IF S + R + P I + ++ ++ G +E
Sbjct: 511 HAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKE 570
Query: 272 AYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL--LDCRSADSGTYVLLS 326
A M + P+HI L S+L AC G + G+Q +++ + Y +
Sbjct: 571 ALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMI 630
Query: 327 NAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQ 386
+ SGK EAV++ V P E + + +LG R + ++ +K
Sbjct: 631 DLLGRSGKLNEAVEL--------VNSIP----FEADGFVWGALLGAARIHKNIELGQKAA 678
Query: 387 ELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
K + LE T V+L +I W
Sbjct: 679 --KMLFDLEPEKSGTHVLLANIYASAGMW 705
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 35/202 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+++H +K G + LV +Y KCG +DA + F E+P +V+ + MI Y
Sbjct: 504 QGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPN-RGIVSWSAMIGGY 562
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+HG +G+ AL LF +M RD V PN +T+V
Sbjct: 563 AQHG-----------------------------HGK--EALRLFNQMLRDGVPPNHITLV 591
Query: 121 CVLSACSQLGALELGRWIHSYMG-KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
VL AC+ G + G+ M I +I++ R G +++A+++ +
Sbjct: 592 SVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPF 651
Query: 179 ERDVTTYNSLIAGLAMHGRSIE 200
E D + +L+ +H ++IE
Sbjct: 652 EADGFVWGALLGAARIH-KNIE 672
>gi|356496056|ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/489 (39%), Positives = 285/489 (58%), Gaps = 33/489 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG +IH V K GL + + L+ +YGKCG
Sbjct: 149 EGVQIHAHVFKAGLEVDVFVQNGLISMYGKCGA--------------------------- 181
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV-RPNEVTI 119
+E+A VF ++ K W+++I L L +M + R E +
Sbjct: 182 -----IEHAGVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSGEGRHRAEESIL 236
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V LSAC+ LG+ LGR IH + ++ +LN +V +LI+MY +CG ++K L VF+ M
Sbjct: 237 VSALSACTHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAH 296
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
++ +Y +IAGLA+HGR EAV +F +M+ +G+ P V +VGVL+ACSH GLV+ G +
Sbjct: 297 KNRYSYTVMIAGLAIHGRGREAVRVFSDMLEEGLTPDDVVYVGVLSACSHAGLVNEGLQC 356
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F M ++ I+P I+HYGC+VDL+ R G +EAYD I +M I P+ ++ SLLSACK+H
Sbjct: 357 FNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIKPNDVVWRSLLSACKVHH 416
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
L++GE A+ + + G Y++L+N YA + KW +IR +M E + + PG S +
Sbjct: 417 NLEIGEIAAENIFRLNKHNPGDYLVLANMYARAKKWANVARIRTEMAEKHLVQTPGFSLV 476
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E N +++F+ D P E IY +Q+++ +K EGY+P VL D+++ EK L
Sbjct: 477 EANRNVYKFVSQDKSQPICETIYDMIQQMEWQLKFEGYTPDMSQVLLDVDEDEKRQRLKH 536
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HS++LAI + LI T + IR+ +NLR+CNDCH+ K I+ I +R+I VRDRNRFHHF++
Sbjct: 537 HSQKLAIAFALIQTSEGSPIRISRNLRMCNDCHTYTKFISVIYEREITVRDRNRFHHFKD 596
Query: 480 GTCSCGDYW 488
GTCSC DYW
Sbjct: 597 GTCSCKDYW 605
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 162/349 (46%), Gaps = 36/349 (10%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
E +++H +LKLGL F D+ S ++ +C
Sbjct: 46 EFKQVHAHILKLGL-------------------FYDSF------------CGSNLVASCA 74
Query: 61 VEH-GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
+ G +E A +FS+++ + + MI G V + ++ AL L+ EM + P+ T
Sbjct: 75 LSRWGSMEYACSIFSQIEEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTY 134
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
VL ACS L AL+ G IH+++ K ++++ V LI+MY +CG I+ A VFE+M E
Sbjct: 135 PFVLKACSLLVALKEGVQIHAHVFKAGLEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDE 194
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGI-RPTKVTFVGVLNACSHGGLVDLGFE 238
+ V +++S+I A E + + +M +G R + V L+AC+H G +LG
Sbjct: 195 KSVASWSSIIGAHASVEMWHECLMLLGDMSGEGRHRAEESILVSALSACTHLGSPNLGRC 254
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
I + R+ E + ++D+ + G E+ NM + +++ IH
Sbjct: 255 IHGILLRNIS-ELNVVVKTSLIDMYVKCGSLEKGLCVFQNMA-HKNRYSYTVMIAGLAIH 312
Query: 299 GKLQLGEQIAKRLL-DCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
G+ + ++ +L + + D YV + +A + +G E +Q +M+
Sbjct: 313 GRGREAVRVFSDMLEEGLTPDDVVYVGVLSACSHAGLVNEGLQCFNRMQ 361
>gi|77554579|gb|ABA97375.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 794
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/492 (39%), Positives = 283/492 (57%), Gaps = 45/492 (9%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
++H VL+LG+ ++ L++ Y KCG+ A ++FDEM
Sbjct: 132 QLHALVLRLGVAADVRLLTTLLDSYAKCGDLASARKVFDEM------------------- 172
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR------DNVRPNEV 117
V+D W +++ GL + E AL LF + PNEV
Sbjct: 173 -------------TVRDVATWNSLLAGLAQGTEPNLALALFHRLANSFQELPSREEPNEV 219
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
TIV LSAC+Q+G L+ G ++H + + +D N V +LI+MYS+CG + +AL VF +
Sbjct: 220 TIVAALSACAQIGLLKDGMYVHEFAKRFGLDRNVRVCNSLIDMYSKCGSLSRALDVFHSI 279
Query: 178 KERDVT--TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
K D T +YN+ I +MHG +A+ +F EM + I P VT++ VL C+H GLVD
Sbjct: 280 KPEDQTLVSYNAAIQAHSMHGHGGDALRLFDEMPTR-IEPDGVTYLAVLCGCNHSGLVDD 338
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G +F SM + P ++HYG IVDLL R GR EAYD + +M D ++ +LL A
Sbjct: 339 GLRVFNSMR----VAPNMKHYGTIVDLLGRAGRLTEAYDTVISMPFPADIVLWQTLLGAA 394
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
K+HG ++L E A +L + S G YVLLSN YAS +W + ++R M+ V+K PG
Sbjct: 395 KMHGVVELAELAANKLAELGSNVDGDYVLLSNVYASKARWMDVGRVRDTMRSNDVRKVPG 454
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
S E++ +H+FI GD HP+ ++IY+ ++++ + GY P T VLHDI + EK++
Sbjct: 455 FSYTEIDGVMHKFINGDKEHPRWQEIYRALEDIVSRISELGYEPETSNVLHDIGEEEKQY 514
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
AL HSE+LAI +GLI+T P T+RV+KNLR+C DCH + KLI+ R I++RDR RFH
Sbjct: 515 ALCYHSEKLAIAFGLIATPPGETLRVIKNLRICGDCHVVAKLISKAYGRVIVIRDRARFH 574
Query: 476 HFENGTCSCGDY 487
FE+G CSC DY
Sbjct: 575 RFEDGQCSCRDY 586
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 78/198 (39%), Gaps = 37/198 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEM-PECNDVVASTVMINC 59
+G +H + GL N L+++Y KCG A+ +F + PE +V+ I
Sbjct: 236 DGMYVHEFAKRFGLDRNVRVCNSLIDMYSKCGSLSRALDVFHSIKPEDQTLVSYNAAIQA 295
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
+ HG G+ AL LF EM + P+ VT
Sbjct: 296 HSMHG----------------------------HGGD---ALRLFDEMP-TRIEPDGVTY 323
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
+ VL C+ G ++ G + + M R+ N G ++++ R G + +A M
Sbjct: 324 LAVLCGCNHSGLVDDGLRVFNSM---RVAPNMKHYGTIVDLLGRAGRLTEAYDTVISMPF 380
Query: 179 ERDVTTYNSLIAGLAMHG 196
D+ + +L+ MHG
Sbjct: 381 PADIVLWQTLLGAAKMHG 398
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/459 (39%), Positives = 283/459 (61%), Gaps = 6/459 (1%)
Query: 35 KDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKV--KDTVCWTAMIDGLV 92
K L +E D + +N Y + G + +A VF R+ +D + W +M+
Sbjct: 344 KRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYG 403
Query: 93 RNGEMARALDLFREMQRDN-VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH 151
+G A +LF+ M+ + V+PN+VT V VL A + ++ GR IH+ + + + +
Sbjct: 404 HHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDT 463
Query: 152 IVGGALINMYSRCGDIDKALQVFEEMK--ERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
++ AL+NMY++CG +D A +F++ + DV + SL+AG A +G++ A+++F M
Sbjct: 464 VIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQ 523
Query: 210 NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRP 269
QG+RP +TF+ L AC+HGG ++ G E+ MT D+GI P +H+ CIVDLL R GR
Sbjct: 524 QQGVRPNHITFISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRL 583
Query: 270 EEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAY 329
+EA + A D I +LL ACK +L+ GE+ A+R++ + +Y++L++ Y
Sbjct: 584 DEAEKLLERTSQA-DVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMY 642
Query: 330 ASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELK 389
A++G+W EA IR M + G++ +PGCS++EVN E+H F GD HP+ E+IY +++ L
Sbjct: 643 AAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLH 702
Query: 390 QIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCN 449
+K GY T +VLHD+ KE L HSE+LAI +GL+ST + +RV+KNLRVC+
Sbjct: 703 WSIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCS 762
Query: 450 DCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
DCH+ KLI+ +T R I++RD +R+HHF +GTCSCGDYW
Sbjct: 763 DCHTATKLISKVTGRDILMRDSSRYHHFTSGTCSCGDYW 801
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 167/393 (42%), Gaps = 59/393 (15%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR IH Q+ N L+ +Y KCG DA Q FD +P
Sbjct: 26 GRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLP---------------- 69
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV-RPNEVTIV 120
R +D V W AMI +RNG AL LFR+M D PN VT V
Sbjct: 70 -------------RASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFV 116
Query: 121 CVLSACSQLGALELG--RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF---- 174
VL +C + G L L R IH + I+ V AL++ Y + G +D A +VF
Sbjct: 117 SVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKS 176
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
+E + T +++I+ +G E++ +F M +G +P+ VT V VLNACS ++
Sbjct: 177 DEEPSTSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACS---MLP 233
Query: 235 LG----FEIFQSM-----TRDYGIEPQ-IEHYGCIVDLLSRVGRPEEAYDFITNMKIAPD 284
+G F + Q+M TRD + + Y DL R +D I + +
Sbjct: 234 VGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDL----SRARATFDAIQSPDVVSW 289
Query: 285 HIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAV---QI 341
+ M + L + L L E++ LL+ T++ A A+ + +I
Sbjct: 290 NAMAAAYLQHHRPREALVLFERM---LLEGVRPSVATFITALTACAAYPPQTASAIGKRI 346
Query: 342 RAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIR 374
++ ++EAG++ + ++ +N L D R
Sbjct: 347 QSLLEEAGLEGDTAVANATLNMYAKCGSLADAR 379
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 135/307 (43%), Gaps = 41/307 (13%)
Query: 39 QLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMA 98
Q + + D V T ++ Y + A F ++ D V W AM +++
Sbjct: 244 QAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPR 303
Query: 99 RALDLFREMQRDNVRPNEVTIVCVLSACSQL---GALELGRWIHSYMGKHRIDLNHIVGG 155
AL LF M + VRP+ T + L+AC+ A +G+ I S + + ++ + V
Sbjct: 304 EALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVAN 363
Query: 156 ALINMYSRCGDIDKALQVFEEMK--ERDVTTYNSLIAGLAMHGRSIEAVEMFREM-INQG 212
A +NMY++CG + A VFE + RD T+NS++A HG EA E+F+ M +
Sbjct: 364 ATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKL 423
Query: 213 IRPTKVTFVGVLNACS-----------HGGLVDLGFE----IFQSMTRDYGIEPQIEHYG 257
++P KVTFV VL+A + H +V GFE I ++ Y ++
Sbjct: 424 VKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQ 483
Query: 258 CIVDLLS-----------------RVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKI 297
I D S + G+ E A M+ + P+HI S L+AC
Sbjct: 484 AIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNH 543
Query: 298 HGKLQLG 304
GKL+ G
Sbjct: 544 GGKLEQG 550
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 139/308 (45%), Gaps = 46/308 (14%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLF----DEMPECNDVVASTVMIN 58
R IHG+++ G+ R LV+ YGK G DA ++F DE P ST ++
Sbjct: 134 RAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEP-------STSLVT 186
Query: 59 CYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVT 118
C +AMI +NG +L LF M + +P+ VT
Sbjct: 187 C-------------------------SAMISACWQNGWPQESLRLFYAMNLEGTKPSGVT 221
Query: 119 IVCVLSACSQLGALELGRWI-HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+V VL+ACS L ++ M ++++G L+ Y+R D+ +A F+ +
Sbjct: 222 LVSVLNACSMLPVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAI 281
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH---GGLVD 234
+ DV ++N++ A H R EA+ +F M+ +G+RP+ TF+ L AC+
Sbjct: 282 QSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASA 341
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAP---DHIMLGSL 291
+G I QS+ + G+E +++ ++ G +A +I+P D I S+
Sbjct: 342 IGKRI-QSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFE--RISPTRRDCITWNSM 398
Query: 292 LSACKIHG 299
L+A HG
Sbjct: 399 LAAYGHHG 406
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 110/199 (55%), Gaps = 8/199 (4%)
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
VRPN ++ +++ACS LG L GR IHS + + N ++G ALI+MYS+CG + A
Sbjct: 3 VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAK 62
Query: 172 QVFEEM---KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGI-RPTKVTFVGVLNAC 227
Q F+ + +RDV T+N++I+ +G + EA+++FR+M + G P VTFV VL++C
Sbjct: 63 QAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSC 122
Query: 228 SHGGLVDL-GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYD-FITNMKIAPDH 285
GL+ L GIE + +VD ++G ++A++ F+ P
Sbjct: 123 VEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPST 182
Query: 286 IML--GSLLSACKIHGKLQ 302
++ +++SAC +G Q
Sbjct: 183 SLVTCSAMISACWQNGWPQ 201
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 89/191 (46%), Gaps = 33/191 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN-DVVASTVMINC 59
+GREIH +V+ G S+ + L+ +Y KCG DA +FD+ DV+A T ++
Sbjct: 446 QGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAG 505
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
Y ++G E RAL LF MQ+ VRPN +T
Sbjct: 506 YAQYGQAE-------------------------------RALKLFWTMQQQGVRPNHITF 534
Query: 120 VCVLSACSQLGALELGRWIHSYMGK-HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
+ L+AC+ G LE G + S M H I ++++ RCG +D+A ++ E
Sbjct: 535 ISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTS 594
Query: 179 ERDVTTYNSLI 189
+ DV T+ +L+
Sbjct: 595 QADVITWMALL 605
>gi|242095216|ref|XP_002438098.1| hypothetical protein SORBIDRAFT_10g007970 [Sorghum bicolor]
gi|241916321|gb|EER89465.1| hypothetical protein SORBIDRAFT_10g007970 [Sorghum bicolor]
Length = 596
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/448 (43%), Positives = 272/448 (60%), Gaps = 13/448 (2%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV T +++ Y + G + +A VF + V+D W A++ GL + E AL LFR +
Sbjct: 154 DVRLMTTLLDSYAKCGDLASARRVFDEMSVRDVATWNALLAGLAQGTEPNLALVLFRRLA 213
Query: 109 ------RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYS 162
PNEVT+V LSAC+QLGAL+ G H + N V ALI+MYS
Sbjct: 214 GSFRELPPREEPNEVTVVAALSACAQLGALKDGLAAHDFARTIGAVGNVRVCNALIDMYS 273
Query: 163 RCGDIDKALQVFEEMK--ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTF 220
+CG + +AL+VF +K +R + +YN+ I L+MHG +A+++F EM + I P +VT+
Sbjct: 274 KCGSLSRALEVFHSIKLEDRTLVSYNATIQALSMHGHGEDALKLFDEMPAR-IEPDEVTY 332
Query: 221 VGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
+ VL C+H GLVD G +F SM + P ++HYG IVDLL R GR EA+D I +M
Sbjct: 333 LAVLGGCNHAGLVDDGRRVFDSMR----VPPNMKHYGTIVDLLGRAGRLAEAHDMIMHMP 388
Query: 281 IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQ 340
D ++ +LL A K+HG + L E A +L D S G YVLLSN YAS +W + +
Sbjct: 389 FPADIVLWQTLLGAAKMHGNVDLAELAATKLADLGSNVDGDYVLLSNVYASKSRWVDVGR 448
Query: 341 IRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPS 400
+R M+ V+K PG S E++ +H+FI GD H + +IY+ + E+ + GY P
Sbjct: 449 VRDTMRSNDVKKVPGFSYTEIDGVMHKFINGDKEHLRWREIYRALDEIGSKICELGYEPE 508
Query: 401 TEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIAN 460
T VLHDI + EK++AL+ HSE+LAI +GLIST P TIRV+KNLR+C DCH + KLI+
Sbjct: 509 TSNVLHDIGEEEKQYALSYHSEKLAIAFGLISTPPGETIRVIKNLRICGDCHVVAKLISK 568
Query: 461 ITKRKIIVRDRNRFHHFENGTCSCGDYW 488
R II+RDR RFH FE+G CSC DYW
Sbjct: 569 AYGRVIIIRDRARFHQFEDGQCSCRDYW 596
>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/489 (39%), Positives = 276/489 (56%), Gaps = 34/489 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H +K G S+ ++Y K G ++A ++FDEMPE
Sbjct: 127 GKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPE--------------- 171
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ W A + V G AL F E +++ + P + +
Sbjct: 172 -----------------RNIATWNAYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSS 214
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLSAC+ L LE+G+ +H+ K + N VG AL++MY +CG I+ A + F+EM ER+
Sbjct: 215 VLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERN 274
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMI--NQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+ T+N++I G A G++ AV +F EM + + P VTFV VL+ACS G V++G EI
Sbjct: 275 LVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEI 334
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F+SM YGIEP EHY C+VDLL R G E+AY FI M I P + G+LL A K+ G
Sbjct: 335 FESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFG 394
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
K +LG+ A L + DSG +VLLSN +A++G+W+EA +R +MK+ G++K GCS I
Sbjct: 395 KSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWI 454
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
N +H F D H + +I + +L+ ++ GY P T L D+E+ EK +
Sbjct: 455 TAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWY 514
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE++A+ +GLIS IR+ KNLR+C DCHS IK I+ I R+IIVRD N FH F +
Sbjct: 515 HSEKIALAFGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRD 574
Query: 480 GTCSCGDYW 488
CSC DYW
Sbjct: 575 NQCSCRDYW 583
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 151/328 (46%), Gaps = 39/328 (11%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
++N Y + +A + S + V WTA+I G V+NG AL F M+RD+++PN
Sbjct: 48 LVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPN 107
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
+ T C A L + +G+ +H+ K + VG + +MYS+ G ++A ++F+
Sbjct: 108 DFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFD 167
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
EM ER++ T+N+ ++ + GR +A+ F E +GI PT VL+AC+ ++++
Sbjct: 168 EMPERNIATWNAYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEV 227
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA----------------------- 272
G + ++ + I +VD+ + G E+A
Sbjct: 228 GKSV-HTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYA 286
Query: 273 -----------YDFIT--NMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADS 319
+D +T + ++AP+++ +LSAC G + +G +I + + +
Sbjct: 287 HQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEP 346
Query: 320 GT--YVLLSNAYASSGKWKEAVQIRAKM 345
G Y + + +G ++A Q KM
Sbjct: 347 GAEHYACVVDLLGRAGMVEQAYQFIKKM 374
>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Glycine max]
Length = 686
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/491 (40%), Positives = 291/491 (59%), Gaps = 37/491 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++HG +++ R + S L++ YGKCG D+V+S +
Sbjct: 229 GRQLHGFIVRSRYREDVSVFNGLIDFYGKCG----------------DIVSSEL------ 266
Query: 62 EHGLVENAFEVFSRVKV--KDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
VFSR+ ++ V W +++ LV+N E RA +F + R V P + I
Sbjct: 267 ----------VFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQ-ARKEVEPTDFMI 315
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
VLSAC++LG LELGR +H+ K ++ N VG AL+++Y +CG I+ A QVF EM E
Sbjct: 316 SSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPE 375
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ--GIRPTKVTFVGVLNACSHGGLVDLGF 237
R++ T+N++I G A G A+ +F+EM + GI + VT V VL+ACS G V+ G
Sbjct: 376 RNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGL 435
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
+IF+SM YGIEP EHY C+VDLL R G + AY+FI M I P + G+LL ACK+
Sbjct: 436 QIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKM 495
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
HGK +LG+ A++L + DSG +V+ SN AS+G+W+EA +R +M++ G++K G S
Sbjct: 496 HGKTKLGKIAAEKLFELDPDDSGNHVVFSNMLASAGRWEEATIVRKEMRDIGIKKNVGYS 555
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
+ V N +H F D H + +I + +L+ +K GY P + L D+E+ EK +
Sbjct: 556 WVAVKNRVHVFQAKDSFHEKNSEIQAMLAKLRGEMKKAGYVPDANLSLFDLEEEEKASEV 615
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE++A+ +GLI+ IR+ KNLR+C DCHS IK I+ I R+IIVRD NRFH F
Sbjct: 616 WYHSEKIALAFGLITLPRGVPIRITKNLRICIDCHSAIKFISKIVGREIIVRDNNRFHRF 675
Query: 478 ENGTCSCGDYW 488
++G CSC DYW
Sbjct: 676 KDGWCSCKDYW 686
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 143/327 (43%), Gaps = 35/327 (10%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
++N Y + L +A V S + V WT++I G V N AL F M+R+ V PN
Sbjct: 49 LVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPN 108
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
+ T CV A + L G+ +H+ K L+ VG + +MYS+ G +A +F+
Sbjct: 109 DFTFPCVFKASASLHMPVTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFD 168
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
EM R++ T+N+ ++ GR ++A+ F++ + P +TF LNAC+ ++L
Sbjct: 169 EMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLEL 228
Query: 236 GFEIFQSMTRDYGIEP------QIEHYGCIVDL------LSRVG---------------- 267
G ++ + R E I+ YG D+ SR+G
Sbjct: 229 GRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAAL 288
Query: 268 ---RPEEAYDFI---TNMKIAPDHIMLGSLLSACKIHGKLQLGEQI-AKRLLDCRSADSG 320
EE + ++ P M+ S+LSAC G L+LG + A L C +
Sbjct: 289 VQNHEEERACMVFLQARKEVEPTDFMISSVLSACAELGGLELGRSVHALALKACVEENIF 348
Query: 321 TYVLLSNAYASSGKWKEAVQIRAKMKE 347
L + Y G + A Q+ +M E
Sbjct: 349 VGSALVDLYGKCGSIEYAEQVFREMPE 375
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 125/297 (42%), Gaps = 40/297 (13%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV + Y + GL A +F + ++ W A + V++G A+ F++
Sbjct: 143 DVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFL 202
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ PN +T L+AC+ + +LELGR +H ++ + R + V LI+ Y +CGDI
Sbjct: 203 CVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIV 262
Query: 169 KALQVFEEMKE--RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+ VF + R+V ++ SL+A L + A +F + + + PT VL+A
Sbjct: 263 SSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARKE-VEPTDFMISSVLSA 321
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK------ 280
C+ G ++LG + ++ +E I +VDL + G E A M
Sbjct: 322 CAELGGLELGRSV-HALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVT 380
Query: 281 ------------------------------IAPDHIMLGSLLSACKIHGKLQLGEQI 307
IA ++ L S+LSAC G ++ G QI
Sbjct: 381 WNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQI 437
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 134 LGRWIHSYMGK-HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGL 192
LGR +H+++ + H L + L+NMYS+ + A V R V T+ SLI+G
Sbjct: 25 LGRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSLISGC 84
Query: 193 AMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+ R A+ F M + + P TF V A +
Sbjct: 85 VHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASA 120
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/489 (38%), Positives = 286/489 (58%), Gaps = 31/489 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR++H +++ G S + +V++Y CG +A F
Sbjct: 445 EGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASF------------------- 485
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ G +E+ D V W A+I L ++G RAL FR M V PN++T V
Sbjct: 486 -QRGAMEDR---------HDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCV 535
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VL AC+ AL G +H ++ ++ N V AL +MY RCG ++ A ++FE++ E
Sbjct: 536 AVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVE 595
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
RDV +N++IA + +G + EA+++F M +G RP + +FV VL+ACSHGGL D G+EI
Sbjct: 596 RDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEI 655
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F+SM + YGI P +HY C VD+L R G +A + I M + P ++ +LL AC+ +
Sbjct: 656 FRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYR 715
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+ G + + D YV+LSN A +GKW EA ++R +M+ G++KE G S I
Sbjct: 716 DVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWI 775
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E+ + +HEF+ GD HP+ E+IY++++ L ++ GY P T +VL +++ EKE L
Sbjct: 776 EIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQ 835
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSERLAI G++S+ T+RV+KNLRVC DCH+ K I+ I ++I+VRD +RFHHF +
Sbjct: 836 HSERLAIALGVMSSST-DTVRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVD 894
Query: 480 GTCSCGDYW 488
G+CSCGDYW
Sbjct: 895 GSCSCGDYW 903
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 169/361 (46%), Gaps = 49/361 (13%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR IH +++ GL+ L+ +YG CG AM LF++M
Sbjct: 146 QGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKME--------------- 190
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+D V W A I ++G++ AL+LF+ MQ + VRP +T+V
Sbjct: 191 ------------------RDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLV 232
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
L+ C+ + + IH + + ++ +V AL + Y+R G + +A +VF+ ER
Sbjct: 233 IALTVCA---TIRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAER 289
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF-EI 239
DV ++N+++ A HG EA +F M+++GI P+KVT V CS L F +
Sbjct: 290 DVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCS-----SLRFGRM 344
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
+ G++ I ++D+ +R G PEEA +I + + ++++ G
Sbjct: 345 IHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFK--RIPCNAVSWNTMIAGSSQKG 402
Query: 300 KLQLGEQIAKRL-LDCRSADSGTYVLLSNAYASSGKWKEAV----QIRAKMKEAGVQKEP 354
+++ ++ +R+ L+ + TY+ L A AS+ + A+ ++ +++ G EP
Sbjct: 403 QMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEP 462
Query: 355 G 355
Sbjct: 463 A 463
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 121/478 (25%), Positives = 208/478 (43%), Gaps = 77/478 (16%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR IH +++ LGL L+ LY KC D
Sbjct: 47 QGRRIHARIVSLGLEEELGN--HLLRLYLKCESLGD------------------------ 80
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
VE EVFSR++V+D WT +I +G+ RA+ +F MQ++ VR + VT +
Sbjct: 81 -----VE---EVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFL 132
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL AC++LG L GR IH+++ + + ++ L+++Y CG + A+ +FE+M ER
Sbjct: 133 AVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ER 191
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D+ ++N+ IA A G A+E+F+ M +G+RP ++T V L C+ +
Sbjct: 192 DLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCA----TIRQAQAI 247
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVG---RPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
+ R+ G+E + + +R+G + +E +D + + MLG+
Sbjct: 248 HFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQ---- 303
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE---- 353
HG + + R+L S + V L NA + I E G+ ++
Sbjct: 304 HGHMSEAALLFARML--HEGISPSKVTLVNASTGCSSLRFGRMIHGCALEKGLDRDIVLG 361
Query: 354 -------PGCSSIEVNNEIHEFILGD-------IRHPQREQIYKKMQELKQIVKLEGYSP 399
C S E + + I + I ++ K+ EL Q ++LEG +P
Sbjct: 362 NALLDMYTRCGSPEEARHLFKRIPCNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAP 421
Query: 400 STEVVLHDIE----DWEKEWALA----IHSERLAICYGLISTKPYTTIRVVKNLRVCN 449
L+ +E + E+ A+A +HS ++ Y +++P VVK C
Sbjct: 422 VRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGY---ASEPAIGTAVVKMYASCG 476
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
RP +V +L A L GR IH+ + + L +G L+ +Y +C +
Sbjct: 27 TRPAH--LVRLLRAAGDDRLLSQGRRIHARIVS--LGLEEELGNHLLRLYLKCESLGDVE 82
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
+VF ++ RD ++ ++I HG++ A+ MF M +G+R VTF+ VL AC+ G
Sbjct: 83 EVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLG 142
Query: 232 LVDLGFEI 239
+ G I
Sbjct: 143 DLSQGRSI 150
>gi|125539857|gb|EAY86252.1| hypothetical protein OsI_07623 [Oryza sativa Indica Group]
Length = 629
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/450 (42%), Positives = 287/450 (63%), Gaps = 9/450 (2%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
L++LY G A ++ DVV+ M++ Y + G + A EVF+R+ ++ V
Sbjct: 119 LLKLYCSLGLIDRARRVLYSGGAALDVVSWNTMVSGYGKGGDLGAAREVFARMPERNLVS 178
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM- 142
W+AM+D VR GE AL +F M R+ RP+ V +V VL AC+ LGA+E GRW+H Y+
Sbjct: 179 WSAMVDACVRAGEFGEALWVFDRMMREEFRPDVVVLVSVLKACAHLGAVERGRWVHRYLE 238
Query: 143 ----GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRS 198
G R +L ++ AL++MY +CG ++ A QVF+ + RDV +N++I GLAM+G
Sbjct: 239 TGSFGGRRGNL--MLETALVDMYCKCGCMEDAWQVFDGVHRRDVVLWNAMIGGLAMNGYG 296
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGC 258
A+E+FR M+ +G P + TF+ VL AC+H G VD G +F+SM +DYGI+PQ EHYGC
Sbjct: 297 ERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKSM-QDYGIKPQREHYGC 355
Query: 259 IVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSAD 318
+ DLL R G EEA + +M + P G+L+S+C++H + +GE++ KRL++ D
Sbjct: 356 LADLLGRAGNVEEAEALLLDMPMEPHASQWGALMSSCQMHNDINVGERVGKRLIELEPYD 415
Query: 319 SGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQR 378
G YV+L N YA +G+W+EA IR M++ G +KE G S IE+N +HEFI GD RHP
Sbjct: 416 GGRYVVLFNLYAVNGRWEEARTIRQMMEDRGAKKETGLSFIELNGLVHEFISGDTRHPLT 475
Query: 379 EQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWE-KEWALAIHSERLAICYGLISTKPYT 437
+IY ++++++ ++L GY T V+ D++D E K AL+ HSERLA+ +G+++
Sbjct: 476 RKIYALLEDIERRLQLIGYVKDTSQVIMDMDDEEDKGIALSYHSERLALAFGILNIPQGV 535
Query: 438 TIRVVKNLRVCNDCHSMIKLIANITKRKII 467
IR+VKNLRVC DCH KL++ + +R+II
Sbjct: 536 PIRIVKNLRVCRDCHVHSKLVSKLYEREII 565
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/483 (39%), Positives = 284/483 (58%), Gaps = 45/483 (9%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ HG V+K+ L S+ L+ Y KCGE
Sbjct: 155 GKAFHGMVIKVLLGSDVFILNSLIHFYAKCGEL--------------------------- 187
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
GL + VF +D V W +MI V+ G AL+LF+EM+ NV+PN +T+V
Sbjct: 188 --GL---GYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVG 242
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLSAC++ E GRW+HSY+ ++RI + + A+++MY++CG ++ A ++F++M E+D
Sbjct: 243 VLSACAKKSDFEFGRWVHSYIERNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKD 302
Query: 182 VTTYNSLIAG------------LAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH 229
+ ++ +++ G LAMHG +A+ +F +M ++P VTF +L ACSH
Sbjct: 303 IVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSH 362
Query: 230 GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLG 289
GLV+ G F M YG+ P ++HY C+VD+L R G EEA + I M +AP + G
Sbjct: 363 VGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWG 422
Query: 290 SLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
+LL AC IH + L EQ +L++ + G YVLLSN YA +GKW +R M++ G
Sbjct: 423 ALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVG 482
Query: 350 VQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIE 409
++KEPGCSSIEV+ +HEF++GD HP ++IY K+ E+ ++ GY P+ +L +E
Sbjct: 483 LKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLLQLVE 542
Query: 410 DWE-KEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
+ + KE AL +HSE+LAI +GLIST IR+VKNLRVC DCHS+ KL++ + R+I++
Sbjct: 543 EEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILL 602
Query: 469 RDR 471
RDR
Sbjct: 603 RDR 605
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 122/261 (46%), Gaps = 7/261 (2%)
Query: 25 VELYGKCGEFKDAMQLFDEMPECN---DVVASTVMINCYVEHGL--VENAFEVFSRVKVK 79
+ L +C E K Q+ +M D +++ +I ++ A +VF ++
Sbjct: 39 LSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHP 98
Query: 80 DTVCWTAMIDGLVRNGEMARALDLF-REMQRDNVRPNEVTIVCVLSACSQLGALELGRWI 138
+ W +I + ++L +F R + + P++ T ++ A S+L L G+
Sbjct: 99 NLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAF 158
Query: 139 HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRS 198
H + K + + + +LI+ Y++CG++ +VF RDV ++NS+I G
Sbjct: 159 HGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCP 218
Query: 199 IEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGC 258
EA+E+F+EM Q ++P +T VGVL+AC+ + G + + R+ I +
Sbjct: 219 EEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNR-IXESLTLSNA 277
Query: 259 IVDLLSRVGRPEEAYDFITNM 279
++D+ ++ G E+A M
Sbjct: 278 MLDMYTKCGSVEDAKRLFDKM 298
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/440 (41%), Positives = 268/440 (60%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
++ + +++ Y + + A VF R+ K+ + WTAMI G +NG A+ +F EMQ
Sbjct: 315 NIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQ 374
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
D ++PN+ T+ V+S+C+ L +LE G H + V AL+ +Y +CG I+
Sbjct: 375 TDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIE 434
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A ++F+EM D +Y +L++G A G++ E +++F +M+ +G++P VTF+GVL+ACS
Sbjct: 435 DAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACS 494
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
GLV+ G F SM +D+GI +HY C++DL SR GR +EA +FI M PD I
Sbjct: 495 RSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGW 554
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+LLSAC++ G +++G+ A+ LL + +YVLL + +AS G+W E +R M++
Sbjct: 555 ATLLSACRLRGDMEIGKWAAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRRGMRDR 614
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
V+KEPGCS I+ N +H F D HP IY+K+Q L + EGY P VLHD+
Sbjct: 615 QVKKEPGCSWIKYKNRVHIFSADDQSHPFSGTIYEKLQWLNSKMAEEGYKPDVSSVLHDV 674
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
D EK L+ HSE+LAI +GLI IRVVKNLRVC DCH+ K I+ IT R I+V
Sbjct: 675 ADAEKVHMLSNHSEKLAIAFGLIFVPEEMPIRVVKNLRVCVDCHNATKFISKITGRDILV 734
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD RFH F NG CSCGD+W
Sbjct: 735 RDAVRFHKFSNGICSCGDFW 754
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 120/407 (29%), Positives = 187/407 (45%), Gaps = 55/407 (13%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H Q+++LG + T LV++Y K G DA ++FDEM +VV MI +
Sbjct: 168 GRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEM-VVKNVVMYNTMITGLL 226
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+VE A VF + +D++ WT M+ GL +NG + ALD+FR M+ + V ++ T
Sbjct: 227 RCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGS 286
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+AC L A E G+ IH+Y + D N VG AL++MYS+C I A VF M ++
Sbjct: 287 ILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKN 346
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++ ++I G +G EAV +F EM GI+P T V+++C++ ++ G + F
Sbjct: 347 IISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQ-FH 405
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M G+ P I +V L + G E+A+ M P H
Sbjct: 406 CMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEM---PFH---------------- 446
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK--------- 352
D +Y L + YA GK KE + + KM GV+
Sbjct: 447 ----------------DQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVL 490
Query: 353 ---------EPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQ 390
E GCS + H +L D + +Y + LK+
Sbjct: 491 SACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKE 537
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 162/341 (47%), Gaps = 25/341 (7%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
L+ Y + G A +LFD MP+ N + +++ L+ + +F+ + +D V
Sbjct: 51 LLTAYARSGRLPLARRLFDAMPDPN-LFTRNALLSALAHARLLPDMDRLFASMPQRDAVS 109
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRD-------NVRPNEVTIVCVLSACSQLGALELGR 136
+ A+I G G ARA +R + R+ VRP+ +T+ ++ A S LG LGR
Sbjct: 110 YNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVMAASALGDRALGR 169
Query: 137 WIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHG 196
+H + + L++MY++ G I A +VF+EM ++V YN++I GL
Sbjct: 170 QVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLRCK 229
Query: 197 RSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHY 256
EA +F M+++ +T+ ++ + GL ++F+ M R G+ +
Sbjct: 230 MVEEARGVFEAMVDR----DSITWTTMVTGLTQNGLQSEALDVFRRM-RAEGVGIDQYTF 284
Query: 257 GCIVDLLSRVGRPEEAYDF--ITNMKIAPDHIMLGSLL----SACKIHGKLQLGEQIAKR 310
G I+ + EE T + +I +GS L S C+ ++L E + +R
Sbjct: 285 GSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCR---SIRLAEAVFRR 341
Query: 311 LLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
+ C++ S T +++ Y +G +EAV++ ++M+ G++
Sbjct: 342 -MTCKNIISWTAMIV--GYGQNGCGEEAVRVFSEMQTDGIK 379
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 94/198 (47%), Gaps = 34/198 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG + H L GLR + LV LYGKCG +DA +LFDEMP +D V+ T +++ Y
Sbjct: 400 EGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMP-FHDQVSYTALVSGY 458
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ G K K+T+ DLF +M V+PN VT +
Sbjct: 459 AQFG------------KAKETI-------------------DLFEKMLLKGVKPNGVTFI 487
Query: 121 CVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
VLSACS+ G +E G + HS H I L +I++YSR G + +A + +M
Sbjct: 488 GVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPR 547
Query: 180 -RDVTTYNSLIAGLAMHG 196
D + +L++ + G
Sbjct: 548 CPDAIGWATLLSACRLRG 565
>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
Length = 704
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/487 (37%), Positives = 291/487 (59%), Gaps = 33/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H LK G+ + L+++Y KCG +DA +FD+MPE
Sbjct: 251 GRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPE--------------- 295
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K TV W ++I G +G AL ++ EM+ V+ + T
Sbjct: 296 -----------------KTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSI 338
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
++ C++L +LE + H+ + +H L+ + AL+++YS+ G I+ A VF+ M ++
Sbjct: 339 IIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKN 398
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++N+LIAG HGR +EAVEMF M+++G+ P VTF+ VL+ACS+ GL D G+EIF+
Sbjct: 399 VISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFE 458
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM+RD+ I+P+ HY C+++LL R G +EA+ I + P M +LL+AC++H
Sbjct: 459 SMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNF 518
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LG+ A++L YV+L N Y SG+ +EA + +K G++ P CS IE+
Sbjct: 519 ELGKFAAEKLYGMGPEKLSNYVVLLNIYNXSGRLEEAAAVIQTLKRRGLRMLPACSWIEI 578
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ + FI GD H Q ++IY+K+ EL + GY P + +L D+++ E E L HS
Sbjct: 579 KKQPYGFISGDKCHAQSKEIYQKLDELMLEISKHGYVPQXKFLLPDVDEQE-ERVLLYHS 637
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GLI+T +T +++V++ R+C DCHS IKLIA +T+R+I+VRD +RFHHF++G+
Sbjct: 638 EKLAIAFGLINTSDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGS 697
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 698 CSCGDYW 704
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 146/310 (47%), Gaps = 34/310 (10%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
+++ ++ GL + R +++ ++ KCG DA +LFDEMPE
Sbjct: 151 KKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPE---------------- 194
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
K+ + W +I GLV G+ A LF M + V +
Sbjct: 195 ----------------KNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTM 238
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
+ A + LG + GR +HS K + + V ALI+MYS+CG I+ A VF++M E+
Sbjct: 239 IRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTT 298
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
+NS+IAG A+HG S EA+ M+ EM + G++ TF ++ C+ ++ +
Sbjct: 299 VGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAG 358
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
+ R +G I +VDL S+ GR E+A + +M + I +L++ HG+
Sbjct: 359 LVR-HGFGLDIVANTALVDLYSKWGRIEDA-KHVFDMMPHKNVISWNALIAGYGNHGRGV 416
Query: 303 LGEQIAKRLL 312
++ +R+L
Sbjct: 417 EAVEMFERML 426
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 103/215 (47%), Gaps = 7/215 (3%)
Query: 88 IDGLVRNGEMARALDLFREMQRDNVRP-NEVTIVCVLSACSQLGALELGRWIHSYMGKHR 146
I+ LV AL+LF ++ + + T ++SAC L ++ + + +YM
Sbjct: 102 IEKLVFFKRYHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSG 161
Query: 147 IDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
+D + + ++ M+ +CG + A ++F+EM E+++ ++N++I GL G EA +F
Sbjct: 162 LDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFL 221
Query: 207 EMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRV 266
M FV ++ A + GL+ G ++ S + G+ + ++D+ S+
Sbjct: 222 MMWQXFSDAGSRMFVTMIRASAGLGLIFAGRQL-HSCSLKTGVGGDVFVACALIDMYSKC 280
Query: 267 GRPEEAYDFITNMKIAPDHIMLG--SLLSACKIHG 299
G E+A M P+ +G S+++ +HG
Sbjct: 281 GSIEDAQCVFDQM---PEKTTVGWNSIIAGYALHG 312
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/488 (39%), Positives = 281/488 (57%), Gaps = 33/488 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+E+HG +++ L + + L+ LY CGE A LFD M +
Sbjct: 513 GKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMED--------------- 557
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K V W M++G ++NG RAL LFR+M V+P E++++
Sbjct: 558 -----------------KTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMS 600
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V ACS L +L LGR H Y K ++ N + ++I+MY++ G + ++ +VF +KER
Sbjct: 601 VFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERS 660
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++N+++ G +HGR+ EA+++F EM G P ++TF+GVL AC+H GLV G
Sbjct: 661 VASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLD 720
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITN-MKIAPDHIMLGSLLSACKIHGK 300
M +G+ P ++HY C++D+L R G+ +EA T M P + LLS+C+IH
Sbjct: 721 QMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKN 780
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
L++GE+IA +L YVLLSN YA SGKW E ++R +MKE ++K+ GCS IE
Sbjct: 781 LEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSWIE 840
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+N ++ F+ G+ E+I L++ + GY P T V HD+ + EK L H
Sbjct: 841 LNGKVFSFVAGESSLDGFEEIKSLWSVLEREIGKMGYRPDTSSVQHDLSEEEKTEQLRGH 900
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI YGLI T TT+RV KNLR+C DCH+ KLI+ + +R+I+VRD RFHHF+NG
Sbjct: 901 SEKLAITYGLIRTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNG 960
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 961 FCSCGDYW 968
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 128/237 (54%), Gaps = 9/237 (3%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
N+ + + + Y + G + A VF ++ K W A+I G ++ + +LD + +M
Sbjct: 426 NNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQM 485
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ + P+ T+ +LSACSQ+ +L+LG+ +H + ++R++ + V +L+++Y CG++
Sbjct: 486 KSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGEL 545
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A +F+ M+++ + ++N+++ G +G A+ +FR+M+ G++P +++ + V AC
Sbjct: 546 STAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGAC 605
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCI----VDLLSRVGRPEEAYDFITNMK 280
S + LG E Y ++ +E I +D+ ++ G E++ +K
Sbjct: 606 SLLPSLRLGRE-----AHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLK 657
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 156/379 (41%), Gaps = 75/379 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +HG V+K L + LV YG G DA+++F MPE N +V+ MI +
Sbjct: 203 GLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERN-LVSWNSMIRVFS 261
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++GL E F + ++ KD E+A P+ T+
Sbjct: 262 DNGLSEECFLLLGQMMEKDD--------------EIA-------------FTPDVATLAT 294
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL C++ + +G+ +H K +D +V AL++MYS+CG I+ A +F+ ++
Sbjct: 295 VLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKN 354
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQG--IRPTKVTFVGVLNAC------------ 227
V ++N+++ G + G + ++ R+M+ G +R +VT + + C
Sbjct: 355 VVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKEL 414
Query: 228 ------------------------SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
+ G + +F S+ + + ++
Sbjct: 415 HCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIR-----SKTVNSWNALIGGY 469
Query: 264 SRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADS 319
S+ P + D MK + PD + SLLSAC L+LG+++ ++ R DS
Sbjct: 470 SQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDS 529
Query: 320 GTYVLLSNAYASSGKWKEA 338
Y+ L + Y G+ A
Sbjct: 530 FVYISLLSLYIHCGELSTA 548
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 124/268 (46%), Gaps = 9/268 (3%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
ND V T +I Y G +++ VF ++ K+ W A+I RN L++F +M
Sbjct: 115 NDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKM 174
Query: 108 -QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
+ P+ T CV+ AC+ + +++G +H + K R+ + V AL++ Y G
Sbjct: 175 ITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGS 234
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ----GIRPTKVTFVG 222
+ AL+VF+ M ER++ ++NS+I + +G S E + +M+ + P T
Sbjct: 235 VSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLAT 294
Query: 223 VLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNM 279
VL C+ + +G + + ++ ++ ++D+ S+ G +A + N
Sbjct: 295 VLPVCARDREIGVGKGV-HGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNK 353
Query: 280 KIAPDHIMLGSLLSACKIHGKLQLGEQI 307
+ + M+G +A IH L Q+
Sbjct: 354 NVVSWNTMVGGFSAAGDIHKTFDLLRQM 381
>gi|356519586|ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/490 (38%), Positives = 289/490 (58%), Gaps = 37/490 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H V G SN + LV Y K + A ++FDEMP+
Sbjct: 127 GTIVHSHVFVSGYASNSFVQAALVTFYAKSCTPRVARKVFDEMPQ--------------- 171
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ + W +MI G +NG + A+++F +M+ P+ T V
Sbjct: 172 -----------------RSIIAWNSMISGYEQNGLASEAVEVFNKMRESGGEPDSATFVS 214
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLSACSQLG+L+LG W+H + I +N ++ +L+NM+SRCGD+ +A VF+ M E +
Sbjct: 215 VLSACSQLGSLDLGCWLHECIVGTGIRMNVVLATSLVNMFSRCGDVGRARAVFDSMNEGN 274
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ ++I+G MHG +EA+E+F M G+ P +VT+V VL+AC+H GL++ G +F
Sbjct: 275 VVSWTAMISGYGMHGYGVEAMEVFHRMKACGVVPNRVTYVAVLSACAHAGLINEGRLVFA 334
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIH 298
SM ++YG+ P +EH+ C+VD+ R G EAY F+ + ++ P + ++L ACK+H
Sbjct: 335 SMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVRGLSSEELVP--AVWTAMLGACKMH 392
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
LG ++A+ L+ + G YVLLSN YA +G+ +R M + G++K+ G S+
Sbjct: 393 KNFDLGVEVAENLISAEPENPGHYVLLSNMYALAGRMDRVESVRNVMIQRGLKKQVGYST 452
Query: 359 IEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALA 418
I+V N + F +GD HP+ +IY + EL K GY+P+ E +H++E+ E+E+AL
Sbjct: 453 IDVENRSYLFSMGDKSHPETNEIYCYLDELMWRCKDAGYAPAPESAMHELEEEEREYALR 512
Query: 419 IHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFE 478
HSE+LA+ +GL+ T T+R+VKNLR+C DCHS IK I+ + R+IIVRD+ RFHHF
Sbjct: 513 YHSEKLAVAFGLMKTCHGVTLRIVKNLRICEDCHSAIKFISVVMNREIIVRDKLRFHHFR 572
Query: 479 NGTCSCGDYW 488
G+CSC DYW
Sbjct: 573 EGSCSCSDYW 582
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 135/288 (46%), Gaps = 9/288 (3%)
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
G + +F V D+ + ++I G A+ +R M + P+ T V+
Sbjct: 56 GSIAYTRRLFRSVSDPDSFLFNSLIKASSNFGFSLDAVFFYRRMLHSRIVPSTYTFTSVI 115
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
AC+ L L LG +HS++ N V AL+ Y++ A +VF+EM +R +
Sbjct: 116 KACADLSLLRLGTIVHSHVFVSGYASNSFVQAALVTFYAKSCTPRVARKVFDEMPQRSII 175
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
+NS+I+G +G + EAVE+F +M G P TFV VL+ACS G +DLG + + +
Sbjct: 176 AWNSMISGYEQNGLASEAVEVFNKMRESGGEPDSATFVSVLSACSQLGSLDLGCWLHECI 235
Query: 244 TRDYGIEPQIEHYGCIVDLLSR---VGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
GI + +V++ SR VGR +D + + + +++S +HG
Sbjct: 236 V-GTGIRMNVVLATSLVNMFSRCGDVGRARAVFDSMNEGNV----VSWTAMISGYGMHGY 290
Query: 301 LQLGEQIAKRLLDCRSADSG-TYVLLSNAYASSGKWKEAVQIRAKMKE 347
++ R+ C + TYV + +A A +G E + A MK+
Sbjct: 291 GVEAMEVFHRMKACGVVPNRVTYVAVLSACAHAGLINEGRLVFASMKQ 338
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 73/181 (40%), Gaps = 33/181 (18%)
Query: 157 LINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPT 216
L+ + G I ++F + + D +NSLI + G S++AV +R M++ I P+
Sbjct: 48 LLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKASSNFGFSLDAVFFYRRMLHSRIVPS 107
Query: 217 KVTFVGVLNACSHGGLVDLGF----EIFQS------------------------MTRDYG 248
TF V+ AC+ L+ LG +F S + +
Sbjct: 108 TYTFTSVIKACADLSLLRLGTIVHSHVFVSGYASNSFVQAALVTFYAKSCTPRVARKVFD 167
Query: 249 IEPQ--IEHYGCIVDLLSRVGRPEEAYDFITNMKIA---PDHIMLGSLLSACKIHGKLQL 303
PQ I + ++ + G EA + M+ + PD S+LSAC G L L
Sbjct: 168 EMPQRSIIAWNSMISGYEQNGLASEAVEVFNKMRESGGEPDSATFVSVLSACSQLGSLDL 227
Query: 304 G 304
G
Sbjct: 228 G 228
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/454 (38%), Positives = 278/454 (61%), Gaps = 1/454 (0%)
Query: 35 KDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRN 94
KD E +++ +++ Y + G +E+A VF + VKD + W MI G +N
Sbjct: 119 KDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKN 178
Query: 95 GEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG 154
AL LF +M + ++P+ T+ C+L AC+ L +L+ G+ +H ++ ++ + V
Sbjct: 179 SLPNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVA 237
Query: 155 GALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIR 214
AL++MY +CG A +F+ + +D+ T+ +IAG MHG A+ F EM GI
Sbjct: 238 NALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIE 297
Query: 215 PTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYD 274
P +V+F+ +L ACSH GL+D G+ F M + ++P++EHY CIVDLL+R G+ AY
Sbjct: 298 PDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYK 357
Query: 275 FITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGK 334
FI +M I PD + G+LLS C+IH ++L E++A+ + + ++G YVLL+N YA + K
Sbjct: 358 FIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEK 417
Query: 335 WKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKL 394
W+E ++R K+ G++K PGCS IEV +++H F+ G+ HPQ ++I ++ L+ +K
Sbjct: 418 WEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKE 477
Query: 395 EGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSM 454
EGY P T L + + +KE AL HSE+LA+ +G+++ P TIRV KNLRVC DCH M
Sbjct: 478 EGYFPKTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCHEM 537
Query: 455 IKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
K I+ R+I++RD NRFHHF++G C C +W
Sbjct: 538 AKFISKTLGREIVLRDSNRFHHFKDGVCCCRGFW 571
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 133/246 (54%), Gaps = 3/246 (1%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
+++ Y + G+++ A VF + V+ V WT++I R G A+ LF EM R+ V
Sbjct: 37 NTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVS 96
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
P+ TI VL AC+ G+LE G+ +H+Y+ ++ + N V AL++MY++CG ++ A V
Sbjct: 97 PDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSV 156
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV 233
F EM +D+ ++N++I G + + EA+ +F +M+ + ++P T +L AC+ +
Sbjct: 157 FLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLE-MKPDGTTLACILPACASLASL 215
Query: 234 DLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLS 293
D G E+ + R+ G + +VD+ + G P A + +M D I +++
Sbjct: 216 DRGKEVHGHILRN-GFFSDQQVANALVDMYVKCGVPVLA-RLLFDMIPTKDLITWTVMIA 273
Query: 294 ACKIHG 299
+HG
Sbjct: 274 GYGMHG 279
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 86/163 (52%), Gaps = 1/163 (0%)
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
+V +L AC+ G + LGR +H K + L++MY++CG +D A+ VF+ M
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
R V T+ SLIA A G S EA+ +F EM +G+ P T VL+AC+ G ++ G +
Sbjct: 61 VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKI 281
+ + R+ ++ I ++D+ ++ G E+A M +
Sbjct: 121 V-HNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPV 162
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 38/198 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+E+HG +L+ G S++ LV++Y KCG A LFD +P D++ TVMI Y
Sbjct: 218 GKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPT-KDLITWTVMIAGYG 276
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG NA F+ EM++ + P+EV+ +
Sbjct: 277 MHGFGNNAITTFN-------------------------------EMRQAGIEPDEVSFIS 305
Query: 122 VLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEMK 178
+L ACS G L+ G + M + L H ++++ +R G + A + + M
Sbjct: 306 ILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHY--ACIVDLLARSGKLAMAYKFIKSMP 363
Query: 179 -ERDVTTYNSLIAGLAMH 195
E D T + +L++G +H
Sbjct: 364 IEPDATIWGALLSGCRIH 381
>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Vitis vinifera]
Length = 704
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/487 (37%), Positives = 291/487 (59%), Gaps = 33/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H LK G+ + L+++Y KCG +DA +FD+MPE
Sbjct: 251 GRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPE--------------- 295
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K TV W ++I G +G AL ++ EM+ V+ + T
Sbjct: 296 -----------------KTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSI 338
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
++ C++L +LE + H+ + +H L+ + AL+++YS+ G I+ A VF+ M ++
Sbjct: 339 IIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKN 398
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++N+LIAG HGR +EAVEMF M+++G+ P VTF+ VL+ACS+ GL D G+EIF+
Sbjct: 399 VISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFE 458
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM+RD+ I+P+ HY C+++LL R G +EA+ I + P M +LL+AC++H
Sbjct: 459 SMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNF 518
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LG+ A++L YV+L N Y SG+ +EA + +K G++ P CS IE+
Sbjct: 519 ELGKFAAEKLYGMGPEKLSNYVVLLNIYNRSGRLEEAAAVIQTLKRRGLRMLPACSWIEI 578
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ + FI GD H Q ++IY+K+ EL + GY P + +L D+++ E E L HS
Sbjct: 579 KKQPYGFISGDKCHAQSKEIYQKLDELMLEISKHGYVPQDKFLLPDVDEQE-ERVLLYHS 637
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GLI+T +T +++V++ R+C DCHS IKLIA +T+R+I+VRD +RFHHF++G+
Sbjct: 638 EKLAIAFGLINTSDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGS 697
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 698 CSCGDYW 704
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 147/310 (47%), Gaps = 34/310 (10%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
+++ ++ GL + R +++ ++ KCG DA +LFDEMPE
Sbjct: 151 KKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPE---------------- 194
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCV 122
K+ + W +I GLV G+ A LF M +D V +
Sbjct: 195 ----------------KNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTM 238
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
+ A + LG + GR +HS K + + V ALI+MYS+CG I+ A VF++M E+
Sbjct: 239 IRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTT 298
Query: 183 TTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQS 242
+NS+IAG A+HG S EA+ M+ EM + G++ TF ++ C+ ++ +
Sbjct: 299 VGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAG 358
Query: 243 MTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQ 302
+ R +G I +VDL S+ GR E+A + +M + I +L++ HG+
Sbjct: 359 LVR-HGFGLDIVANTALVDLYSKWGRIEDA-KHVFDMMPHKNVISWNALIAGYGNHGRGV 416
Query: 303 LGEQIAKRLL 312
++ +R+L
Sbjct: 417 EAVEMFERML 426
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 103/215 (47%), Gaps = 7/215 (3%)
Query: 88 IDGLVRNGEMARALDLFREMQRDNVRP-NEVTIVCVLSACSQLGALELGRWIHSYMGKHR 146
I+ LV AL+LF ++ + + T ++SAC L ++ + + +YM
Sbjct: 102 IEKLVFFKRYHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSG 161
Query: 147 IDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
+D + + ++ M+ +CG + A ++F+EM E+++ ++N++I GL G EA +F
Sbjct: 162 LDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFL 221
Query: 207 EMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRV 266
M FV ++ A + GL+ G ++ S + G+ + ++D+ S+
Sbjct: 222 MMWQDFSDAGSRMFVTMIRASAGLGLIFAGRQL-HSCSLKTGVGGDVFVACALIDMYSKC 280
Query: 267 GRPEEAYDFITNMKIAPDHIMLG--SLLSACKIHG 299
G E+A M P+ +G S+++ +HG
Sbjct: 281 GSIEDAQCVFDQM---PEKTTVGWNSIIAGYALHG 312
>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
Length = 749
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/527 (38%), Positives = 302/527 (57%), Gaps = 42/527 (7%)
Query: 1 EGREIHGQVLKLGLR-SNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINC 59
EG+ HGQ + LG+ SN LV++Y K G+ +DA + D++ DVV T +I
Sbjct: 195 EGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVG-KDVVLFTALIVG 253
Query: 60 YVEHGLVENAFEVFS--------------------------------------RVKVKDT 81
Y HG + +VF + ++
Sbjct: 254 YSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESA 313
Query: 82 VCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSY 141
V WT++I GLV+NG AL FR+M R ++ PN T+ VL ACS L LE G+ IH+
Sbjct: 314 VTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAI 373
Query: 142 MGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEA 201
+ K +D++ VG ALI+ Y +CG + A VF + E DV + NS+I A +G EA
Sbjct: 374 VMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEA 433
Query: 202 VEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVD 261
+++F M + G+ P VT++GVL+AC++ GL++ G IF S IE +HY C+VD
Sbjct: 434 LQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVD 493
Query: 262 LLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT 321
LL R GR +EA I + I+ D ++ +LLSAC+IHG +++ +++ R++D D GT
Sbjct: 494 LLGRAGRLKEAEMLINQVNIS-DVVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGT 552
Query: 322 YVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQI 381
+VLLSN YAS+G W + +++++ M+E ++K P S ++V EIH F+ GD HP I
Sbjct: 553 HVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDI 612
Query: 382 YKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLI-STKPYTTIR 440
+K++EL + VK GY P T VL D+++ +K +L HSE+LA+ + L S TTIR
Sbjct: 613 REKLEELIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIR 672
Query: 441 VVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDY 487
++KNLRVC DCH+ +K ++ I R II RD RFHHF NG CSCGDY
Sbjct: 673 ILKNLRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDY 719
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 153/333 (45%), Gaps = 40/333 (12%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+I+ Y++ G V A +VF V + V W +MI +RNG A+D+++ M D + P+
Sbjct: 117 LIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPD 176
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHI-VGGALINMYSRCGDIDKALQVF 174
E T V A S LG + G+ H + ++++ VG AL++MY++ G + A V
Sbjct: 177 EFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVS 236
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
+++ +DV + +LI G + HG E++++FR M +GI + T VL C G L D
Sbjct: 237 DQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCC--GNLED 294
Query: 235 L-GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGS 290
L + + G+E + IV L+ GR E A M I P+ L S
Sbjct: 295 LTSGRLIHGLIVKAGLESAVTWTSVIVGLVQN-GREEIALLKFRQMLRSSITPNSFTLSS 353
Query: 291 LLSACKIHGKLQLGEQI---------------AKRLLD----CRSADSGTYVL------- 324
+L AC L+ G+QI L+D C S + V
Sbjct: 354 VLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVD 413
Query: 325 ------LSNAYASSGKWKEAVQIRAKMKEAGVQ 351
+ +YA +G EA+Q+ + MK+ G++
Sbjct: 414 VVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLE 446
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 88/167 (52%), Gaps = 7/167 (4%)
Query: 149 LNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM 208
+H +G LI+ Y +CG + A +VF+E+ R + +NS+IA +GRS EA+++++ M
Sbjct: 109 FHHSLGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRM 168
Query: 209 INQGIRPTKVTFVGVLNACSHGGLVDLGFEIF-QSMTRDYGIEPQIEHYGCIVDLLSRVG 267
+ GI P + TF V A S GLV G QS+ G+ + +VD+ ++ G
Sbjct: 169 VPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVS-NVFVGSALVDMYAKFG 227
Query: 268 RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK----LQLGEQIAKR 310
+ +A +++ + D ++ +L+ HG+ LQ+ + K+
Sbjct: 228 KMRDA-RLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKK 273
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/441 (39%), Positives = 278/441 (63%), Gaps = 1/441 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM- 107
D+ S +++ Y + G ++ A VFS ++VKD + W +I G +N AL LF +
Sbjct: 280 DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLL 339
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ P+E T+ CVL AC+ L A + GR IH Y+ ++ + V +L++MY++CG +
Sbjct: 340 EEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL 399
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A +F+++ +D+ ++ +IAG MHG EA+ +F +M GI +++FV +L AC
Sbjct: 400 LLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYAC 459
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SH GLVD G+ F M + IEP +EHY CIVD+L+R G +AY FI NM I PD +
Sbjct: 460 SHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATI 519
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
G+LL C+IH ++L E++A+++ + ++G YVL++N YA + KW++ ++R ++ +
Sbjct: 520 WGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQ 579
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
G++K PGCS IE+ ++ F+ GD +P+ E I +++++ + EGYSP T+ L D
Sbjct: 580 RGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALID 639
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
E+ EKE AL HSE+LA+ G+IS+ IRV KNLRVC DCH M K ++ +T+R+I+
Sbjct: 640 AEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIV 699
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
+RD NRFH F++G CSC +W
Sbjct: 700 LRDSNRFHQFKDGHCSCRGFW 720
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 131/281 (46%), Gaps = 35/281 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++HG +LK G S LV Y K A ++FDEM E
Sbjct: 63 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE--------------- 107
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+D + W ++I+G V NG + L +F +M + + TIV
Sbjct: 108 -----------------RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 150
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V + C+ + LGR +HS K L++MYS+CGD+D A VF EM +R
Sbjct: 151 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 210
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +Y S+IAG A G + EAV++F EM +GI P T VLN C+ L+D G + +
Sbjct: 211 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 270
Query: 242 SMTR-DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKI 281
+ D G + + + ++D+ ++ G +EA + M++
Sbjct: 271 WIKENDLGFDIFVSN--ALMDMYAKCGSMQEAELVFSEMRV 309
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 145/301 (48%), Gaps = 37/301 (12%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
+++ Y + G +++A VF + + V +T+MI G R G A+ LF EM+ + +
Sbjct: 184 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 243
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
P+ T+ VL+ C++ L+ G+ +H ++ ++ + + V AL++MY++CG + +A V
Sbjct: 244 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 303
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSHGGL 232
F EM+ +D+ ++N++I G + + + EA+ +F ++ + P + T VL AC+
Sbjct: 304 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 363
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
D G EI + R+ G +VD+ ++ G ++L +L
Sbjct: 364 FDKGREIHGYIMRN-GYFSDRHVANSLVDMYAKCGA-----------------LLLAHML 405
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
D S D ++ ++ Y G KEA+ + +M++AG++
Sbjct: 406 ------------------FDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEA 447
Query: 353 E 353
+
Sbjct: 448 D 448
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 142/316 (44%), Gaps = 50/316 (15%)
Query: 73 FSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGAL 132
F VK++ + W +++ L ++G+ + ++ LF++M V + T CV + S L ++
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 133 ELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGL 192
G +H ++ K + VG +L+ Y + +D A +VF+EM ERDV ++NS+I G
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 193 AMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF--------------- 237
+G + + + +F +M+ GI T V V C+ L+ LG
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180
Query: 238 --------------------EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFIT 277
+F+ M+ + + Y ++ +R G EA
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMS-----DRSVVSYTSMIAGYAREGLAGEAVKLFE 235
Query: 278 NMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNA----YA 330
M+ I+PD + ++L+ C + L G+++ + + + D G + +SNA YA
Sbjct: 236 EMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI---KENDLGFDIFVSNALMDMYA 292
Query: 331 SSGKWKEAVQIRAKMK 346
G +EA + ++M+
Sbjct: 293 KCGSMQEAELVFSEMR 308
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 36/198 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GREIHG +++ G S+R LV++Y KCG A LFD++ D+V+ TVMI Y
Sbjct: 366 KGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS-KDLVSWTVMIAGY 424
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG + A+ LF +M++ + +E++ V
Sbjct: 425 GMHGFGK-------------------------------EAIALFNQMRQAGIEADEISFV 453
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG--GALINMYSRCGDIDKALQVFEEMK 178
+L ACS G ++ G W + +H + V +++M +R GD+ KA + E M
Sbjct: 454 SLLYACSHSGLVDEG-WRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMP 512
Query: 179 -ERDVTTYNSLIAGLAMH 195
D T + +L+ G +H
Sbjct: 513 IPPDATIWGALLCGCRIH 530
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 370 bits (950), Expect = e-99, Method: Compositional matrix adjust.
Identities = 185/489 (37%), Positives = 285/489 (58%), Gaps = 34/489 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+IH ++KL ++ L+++Y K G+ +A +F +PE
Sbjct: 178 GRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPE--------------- 222
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+D V TA+I G + G AL+LFR +QR+ ++ N VT
Sbjct: 223 -----------------RDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTS 265
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL+A S L AL+ G+ +H+++ + + ++ +LI+MYS+CG++ A ++F+ + ER
Sbjct: 266 VLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERT 325
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSHGGLVDLGFEIF 240
V ++N+++ G + HG E +E+F MI++ ++P VT + VL+ CSHGGL D G +IF
Sbjct: 326 VISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIF 385
Query: 241 QSMTR-DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
MT ++P +HYGC+VD+L R GR E A++F+ M P + G LL AC +H
Sbjct: 386 YDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHS 445
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
L +GE + +LL ++G YV+LSN YAS+G+W++ +R M + V KEPG S I
Sbjct: 446 NLDIGEFVGHQLLQIEPENAGNYVILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWI 505
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E++ +H F D HP+RE++ K+QEL K GY P VLHD+++ +KE L
Sbjct: 506 ELDQVLHTFHASDCSHPRREEVSAKVQELSARFKEAGYVPDLSCVLHDVDEEQKEKILLS 565
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LA+ +GLI+T IRV+KNLR+C DCH+ K + I R++ +RD+NRFH
Sbjct: 566 HSEKLALTFGLIATPESVPIRVIKNLRICVDCHNFAKYTSKIYGREVSLRDKNRFHRIVG 625
Query: 480 GTCSCGDYW 488
G CSCGDYW
Sbjct: 626 GKCSCGDYW 634
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 171/411 (41%), Gaps = 75/411 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+ +H ++K R +L+ Y KC +DA +FD MPE
Sbjct: 76 EGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPE-------------- 121
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++ V WTAMI + G ++AL LF +M R PNE T
Sbjct: 122 ------------------RNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFA 163
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL++C LGR IHS++ K + + VG +L++MY++ G I +A +F+ + ER
Sbjct: 164 TVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPER 223
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV + ++I+G A G EA+E+FR + +G++ VT+ VL A S +D G ++
Sbjct: 224 DVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVH 283
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YD----------------------- 274
+ R + + ++D+ S+ G A +D
Sbjct: 284 NHLLRS-EVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEG 342
Query: 275 ---------FITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR---SADSGTY 322
I K+ PD + + ++LS C G G I + + DS Y
Sbjct: 343 REVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHY 402
Query: 323 VLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGC----SSIEVNNEIHEFI 369
+ + +G+ + A + KM GC S+ N +I EF+
Sbjct: 403 GCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFV 453
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 370 bits (950), Expect = e-99, Method: Compositional matrix adjust.
Identities = 183/441 (41%), Positives = 276/441 (62%), Gaps = 1/441 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV +++ Y + G V++A VF + V+D V W +MI +NG AL L R+M
Sbjct: 197 DVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMA 256
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ + P T+V +SA + AL GR +H + + L + +L++MY++ G +
Sbjct: 257 ANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQ 316
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNAC 227
A +FE++ +R++ ++N++I G MHG + EA+ +F +M + P +TFVGVL+AC
Sbjct: 317 VARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNITFVGVLSAC 376
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
+HGG+V+ E F M Y I+P ++HY C++D+L GR EEAYD I M I PD +
Sbjct: 377 NHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMSIEPDSGI 436
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
G+LL+ CKIH ++LGE ++L++ D+G YV LSN YA SGKW++A ++R M
Sbjct: 437 WGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQSGKWEKAARVRKLMTN 496
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
G++K CS IE+ + H F++GD HP+ ++IY +++ L+ ++ GY P V H+
Sbjct: 497 RGLKKILACSWIELKGKTHGFLVGDASHPRSDEIYGELERLEGLMSDAGYVPDIIPVFHN 556
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
++D EK + HSERLAI +GLIST P T + V KNLRVC DCH +IKLI+ I +R+II
Sbjct: 557 VDDDEKRNMVRSHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLISQIVQREII 616
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
+RD NR+HHF NG CSC DYW
Sbjct: 617 IRDVNRYHHFVNGECSCKDYW 637
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 197/469 (42%), Gaps = 90/469 (19%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++HG++L GL + KLV+LY CG+ A +LFD MP+
Sbjct: 81 GRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPK--------------- 125
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ W +I R G A+ L+R M V P+ T
Sbjct: 126 -----------------RNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPL 168
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL AC+ L LE GR +H + R + V +++MY++CG +D A VF+ + RD
Sbjct: 169 VLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRD 228
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+NS+IA +GR +EA+ + R+M GI PT T V ++A + + G E+
Sbjct: 229 AVVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHG 288
Query: 242 -SMTRDYGIEPQIEHYGCIVDLLSRV-------------------------------GRP 269
R +G++ +++ +VD+ ++ G
Sbjct: 289 FGWRRGFGLQDKLKT--SLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHA 346
Query: 270 EEAYDFITNMK----IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT--YV 323
+EA MK + PD+I +LSAC G ++ ++ +++ S Y
Sbjct: 347 DEALALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYT 406
Query: 324 LLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNN-EIHEFI-LGDIRHPQREQI 381
+ + +G+++EA + +K ++ + G +N +IH+ + LG++
Sbjct: 407 CVIDVLGHTGRFEEAYDL---IKGMSIEPDSGIWGALLNGCKIHKNVELGEL-------- 455
Query: 382 YKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGL 430
L+++++LE V L +I +W A +L GL
Sbjct: 456 -----ALQKLIELEPEDAGNYVHLSNIYAQSGKWEKAARVRKLMTNRGL 499
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 95/183 (51%), Gaps = 10/183 (5%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L +C G+L GR +H + + + ++ L+++Y+ CG + A ++F+ M +R+
Sbjct: 68 ILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRN 127
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL--GFEI 239
V +N LI A G AV ++R M+ G+ P T+ VL AC+ L+DL G E+
Sbjct: 128 VFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACA--ALLDLETGREV 185
Query: 240 FQSMTRDYGIEPQIEHYGC--IVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
Q ++ G + + C +VD+ ++ G ++A + + D ++ S+++A
Sbjct: 186 HQRVS---GTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVR-DAVVWNSMIAAYGQ 241
Query: 298 HGK 300
+G+
Sbjct: 242 NGR 244
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 103/241 (42%), Gaps = 13/241 (5%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GRE+HG + G + LV++Y K G + A LF+++ + ++V+ MI Y
Sbjct: 283 GRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMK-RELVSWNAMICGYG 341
Query: 62 EHGLVENAFEVFSRVK-----VKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPN 115
HG + A +F+++K D + + ++ G + A + F M +++P
Sbjct: 342 MHGHADEALALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPT 401
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALIN---MYSRCGDIDKALQ 172
CV+ G E + + I+ + + GAL+N ++ + ALQ
Sbjct: 402 VQHYTCVIDVLGHTGRFEEA---YDLIKGMSIEPDSGIWGALLNGCKIHKNVELGELALQ 458
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
E++ D Y L A G+ +A + + M N+G++ L +HG L
Sbjct: 459 KLIELEPEDAGNYVHLSNIYAQSGKWEKAARVRKLMTNRGLKKILACSWIELKGKTHGFL 518
Query: 233 V 233
V
Sbjct: 519 V 519
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 175/433 (40%), Positives = 265/433 (61%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+I+ Y + + +A VF D + T+MI L + A+ LF EM R + P+
Sbjct: 445 LIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPD 504
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
+ +L+AC+ L A E G+ +H+++ K + + G AL+ Y++CG I+ A F
Sbjct: 505 PFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFS 564
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
+ ER V +++++I GLA HG A+E+F M+++GI P +T VL AC+H GLVD
Sbjct: 565 SLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDE 624
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
F SM +GI+ EHY C++DLL R G+ ++A + + +M + + G+LL A
Sbjct: 625 AKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGAS 684
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
++H +LG+ A++L SGT+VLL+N YAS+G W E ++R MK++ ++KEP
Sbjct: 685 RVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPA 744
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
S IEV +++H FI+GD HP ++IY K+ EL ++ G+ P+ +V LHD++ EKE
Sbjct: 745 MSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKEL 804
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
L+ HSERLA+ + L+ST P IRV KNLR+C DCH K I+ I R+II+RD NRFH
Sbjct: 805 LLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFH 864
Query: 476 HFENGTCSCGDYW 488
HF +GTCSCGDYW
Sbjct: 865 HFRDGTCSCGDYW 877
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 157/338 (46%), Gaps = 38/338 (11%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV + +++ Y++ G V+ A +F ++ D V W A+I G V NG RA++L +M+
Sbjct: 236 DVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMK 295
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ PN T+ +L ACS GA +LGR IH +M K D + +G L++MY++ +D
Sbjct: 296 YSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLD 355
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +VF+ M RD+ N+LI+G + GR EA+ +F E+ +G+ + T VL + +
Sbjct: 356 DARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTA 415
Query: 229 -----------HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVD---------------- 261
H V +GF IF + + G+ C+ D
Sbjct: 416 SLEAASTTRQVHALAVKIGF-IFDAHVVN-GLIDSYWKCSCLSDANRVFEECSSGDIIAC 473
Query: 262 -----LLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
LS+ E A M + PD +L SLL+AC + G+Q+ L+
Sbjct: 474 TSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIK 533
Query: 314 CR-SADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
+ +D+ L YA G ++A + + E GV
Sbjct: 534 RQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGV 571
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 127/254 (50%), Gaps = 3/254 (1%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKV-KDTVCWTAMIDGLVRNGEMARALDLFRE 106
+DV + ++ Y G +++A VF+ ++ V W ++ V+N + A+ +F E
Sbjct: 133 SDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGE 192
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M ++P E CV++AC+ +E GR +H+ + + D + AL++MY + G
Sbjct: 193 MVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGR 252
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+D A +FE+M + DV ++N+LI+G ++G A+E+ +M G+ P T +L A
Sbjct: 253 VDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKA 312
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
CS G DLG +I M + G +VD+ ++ ++A M D I
Sbjct: 313 CSGAGAFDLGRQIHGFMIKANADSDDYIGVG-LVDMYAKNHFLDDARKVFDWM-FHRDLI 370
Query: 287 MLGSLLSACKIHGK 300
+ +L+S C G+
Sbjct: 371 LCNALISGCSHGGR 384
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 145/357 (40%), Gaps = 74/357 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H +LK G S S R L+ Y KC A + FDE+P+ C+V
Sbjct: 23 GAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRFFDEIPD-----------PCHV 69
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
W++++ NG A+ F M+ + V NE +
Sbjct: 70 S---------------------WSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPV 108
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM-KER 180
VL LG +H+ + V AL+ MY G +D A +VF E ER
Sbjct: 109 VLKCVPD---ARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSER 165
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+ ++N L++ + + +A+++F EM+ GI+PT+ F V+NAC+ ++ G ++
Sbjct: 166 NAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQV- 224
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGR-----------PEE------------------ 271
+M G + + +VD+ ++GR P+
Sbjct: 225 HAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHD 284
Query: 272 --AYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV 323
A + + MK + P+ L S+L AC G LG QI ++ +ADS Y+
Sbjct: 285 HRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKA-NADSDDYI 340
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 137/324 (42%), Gaps = 38/324 (11%)
Query: 13 GLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMINCYVEHGLVENA 69
GL N T +++ G F Q+ M + N D +++ Y ++ +++A
Sbjct: 298 GLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDA 357
Query: 70 FEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQL 129
+VF + +D + A+I G G AL LF E++++ + N T+ VL + + L
Sbjct: 358 RKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASL 417
Query: 130 GALELGRWIHSYMGKHRIDLN-HIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSL 188
A R +H+ K + H+V G LI+ Y +C + A +VFEE D+ S+
Sbjct: 418 EAASTTRQVHALAVKIGFIFDAHVVNG-LIDSYWKCSCLSDANRVFEECSSGDIIACTSM 476
Query: 189 IAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF------QS 242
I L+ A+++F EM+ +G+ P +LNAC+ + G ++ Q
Sbjct: 477 ITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQF 536
Query: 243 MTRDYGIEPQIEHY---GCIVDL---------------------LSRVGRPEEAYDFITN 278
M+ + + Y G I D L++ G + A +
Sbjct: 537 MSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGR 596
Query: 279 M---KIAPDHIMLGSLLSACKIHG 299
M I P+HI + S+L AC G
Sbjct: 597 MVDEGINPNHITMTSVLCACNHAG 620
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 2/150 (1%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D A ++ Y + G +E+A FS + + V W+AMI GL ++G RAL+LF M
Sbjct: 538 SDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRM 597
Query: 108 QRDNVRPNEVTIVCVLSACSQLGAL-ELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
+ + PN +T+ VL AC+ G + E R+ +S ID +I++ R G
Sbjct: 598 VDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGK 657
Query: 167 IDKALQVFEEMK-ERDVTTYNSLIAGLAMH 195
+D A+++ M + + + + +L+ +H
Sbjct: 658 LDDAMELVNSMPFQANASIWGALLGASRVH 687
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 181/443 (40%), Positives = 280/443 (63%), Gaps = 1/443 (0%)
Query: 46 ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
E N VV S+ + + Y++ G + +V +++++ V W +I G +NG LDL+
Sbjct: 121 EFNLVVGSS-LAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYN 179
Query: 106 EMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG 165
M+ +RP+++T+V V+S+ ++L L G+ IH+ K + V +LI+MYS+CG
Sbjct: 180 MMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCG 239
Query: 166 DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
++ +++ + + D ++S+IA HGR EAV +F +M +G+ VTF+ +L
Sbjct: 240 CLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLY 299
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDH 285
ACSH GL + G F+ M YG++P++EHY C+VDLL R G +EA I +M + D
Sbjct: 300 ACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADV 359
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKM 345
++ +LLSAC+IH + + A+ +L DS TYVLLSN +AS+ +WK+ ++R M
Sbjct: 360 VIWKTLLSACRIHRNADMATRTAEEILRLNPQDSATYVLLSNIHASAKRWKDVSKVRTTM 419
Query: 346 KEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVL 405
++ V+KEPG S +EV N + +F +GD HP E+I ++EL + +KL GY P T V
Sbjct: 420 RDRNVKKEPGVSWLEVKNRVFQFSMGDKSHPMSEEIDLYLKELMEEMKLRGYVPDTATVF 479
Query: 406 HDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRK 465
HD + EKE +L HSE+LAI +GL++ P + IRV+KNLR+C+DCH IKLI++I R+
Sbjct: 480 HDTDSEEKENSLVNHSEKLAIAFGLMNIPPGSPIRVMKNLRICSDCHVAIKLISDINNRE 539
Query: 466 IIVRDRNRFHHFENGTCSCGDYW 488
IIVRD +RFHHF++G CSCGDYW
Sbjct: 540 IIVRDTSRFHHFKHGKCSCGDYW 562
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 151/274 (55%), Gaps = 3/274 (1%)
Query: 27 LYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTA 86
+Y K GE ++A+ F+ MP N +++ ++IN +V+HG +++A +VF + ++ W A
Sbjct: 1 MYFKMGEIQEAIAFFNAMPMRN-IMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNA 59
Query: 87 MIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHR 146
M+ GL++ L LFREM P+E T+ VL C+ L A G+ +H+Y+ K+
Sbjct: 60 MVSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYG 119
Query: 147 IDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
+ N +VG +L +MY + G + + +V + M+ R+V +N+LIAG A +G ++++
Sbjct: 120 YEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYN 179
Query: 207 EMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRV 266
M G+RP K+T V V+++ + + G +I + G + ++ + S+
Sbjct: 180 MMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKA-GANSAVAVLSSLISMYSKC 238
Query: 267 GRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
G E++ + + + PD ++ S+++A HG+
Sbjct: 239 GCLEDSMKALLDCE-HPDSVLWSSMIAAYGFHGR 271
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 38/213 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G++IH + +K G S + L+ +Y KCG +D+M+ +++C
Sbjct: 208 QGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMK---------------ALLDC- 251
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
EH D+V W++MI +G A+ LF +M+++ + N+VT +
Sbjct: 252 -EH---------------PDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFL 295
Query: 121 CVLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+L ACS G E G M + + L H ++++ R G +D+A + M
Sbjct: 296 SLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYT--CVVDLLGRSGCLDEAEAMIRSM 353
Query: 178 K-ERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
E DV + +L++ +H + A E++
Sbjct: 354 PLEADVVIWKTLLSACRIHRNADMATRTAEEIL 386
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 175/433 (40%), Positives = 265/433 (61%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+I+ Y + + +A VF D + T+MI L + A+ LF EM R + P+
Sbjct: 445 LIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPD 504
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
+ +L+AC+ L A E G+ +H+++ K + + G AL+ Y++CG I+ A F
Sbjct: 505 PFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFS 564
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
+ ER V +++++I GLA HG A+E+F M+++GI P +T VL AC+H GLVD
Sbjct: 565 SLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDE 624
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
F SM +GI+ EHY C++DLL R G+ ++A + + +M + + G+LL A
Sbjct: 625 AKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGAS 684
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPG 355
++H +LG+ A++L SGT+VLL+N YAS+G W E ++R MK++ ++KEP
Sbjct: 685 RVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPA 744
Query: 356 CSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEW 415
S IEV +++H FI+GD HP ++IY K+ EL ++ G+ P+ +V LHD++ EKE
Sbjct: 745 MSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKEL 804
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
L+ HSERLA+ + L+ST P IRV KNLR+C DCH K I+ I R+II+RD NRFH
Sbjct: 805 LLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFH 864
Query: 476 HFENGTCSCGDYW 488
HF +GTCSCGDYW
Sbjct: 865 HFRDGTCSCGDYW 877
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 157/338 (46%), Gaps = 38/338 (11%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV + +++ Y++ G V+ A +F ++ D V W A+I G V NG RA++L +M+
Sbjct: 236 DVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMK 295
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ PN T+ +L ACS GA +LGR IH +M K D + +G L++MY++ +D
Sbjct: 296 YSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLD 355
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +VF+ M RD+ N+LI+G + GR EA+ +F E+ +G+ + T VL + +
Sbjct: 356 DARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTA 415
Query: 229 -----------HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVD---------------- 261
H V +GF IF + + G+ C+ D
Sbjct: 416 SLEAASTTRQVHALAVKIGF-IFDAHVVN-GLIDSYWKCSCLSDANRVFEECSSGDIIAC 473
Query: 262 -----LLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
LS+ E A M + PD +L SLL+AC + G+Q+ L+
Sbjct: 474 TSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIK 533
Query: 314 CR-SADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
+ +D+ L YA G ++A + + E GV
Sbjct: 534 RQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGV 571
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 127/254 (50%), Gaps = 3/254 (1%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKV-KDTVCWTAMIDGLVRNGEMARALDLFRE 106
+DV + ++ Y G +++A VF+ ++ V W ++ V+N + A+ +F E
Sbjct: 133 SDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGE 192
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M ++P E CV++AC+ +E GR +H+ + + D + AL++MY + G
Sbjct: 193 MVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGR 252
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+D A +FE+M + DV ++N+LI+G ++G A+E+ +M G+ P T +L A
Sbjct: 253 VDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKA 312
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
CS G DLG +I M + G +VD+ ++ ++A M D I
Sbjct: 313 CSGAGAFDLGRQIHGFMIKANADSDDYIGVG-LVDMYAKNHFLDDARKVFDWM-FHRDLI 370
Query: 287 MLGSLLSACKIHGK 300
+ +L+S C G+
Sbjct: 371 LCNALISGCSHGGR 384
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 146/357 (40%), Gaps = 74/357 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H +LK G S S R L+ Y KC A ++FDE+P+ C+V
Sbjct: 23 GAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRVFDEIPD-----------PCHV 69
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
W++++ NG A+ F M+ + V NE +
Sbjct: 70 S---------------------WSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPV 108
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM-KER 180
VL LG +H+ + V AL+ MY G +D A +VF E ER
Sbjct: 109 VLKCVPD---ARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSER 165
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+ ++N L++ + + +A+++F EM+ GI+PT+ F V+NAC+ ++ G ++
Sbjct: 166 NAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQV- 224
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGR-----------PEE------------------ 271
+M G + + +VD+ ++GR P+
Sbjct: 225 HAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHD 284
Query: 272 --AYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV 323
A + + MK + P+ L S+L AC G LG QI ++ +ADS Y+
Sbjct: 285 HRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKA-NADSDDYI 340
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 134/332 (40%), Gaps = 67/332 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+IHG ++K S+ + LV++Y K DA ++FD M
Sbjct: 322 GRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWM----------------- 364
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
F R D + A+I G G AL LF E++++ + N T+
Sbjct: 365 -----------FHR----DLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAA 409
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLN-HIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL + + L A R +H+ K + H+V G LI+ Y +C + A +VFEE
Sbjct: 410 VLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNG-LIDSYWKCSCLSDANRVFEECSSG 468
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D+ S+I L+ A+++F EM+ +G+ P +LNAC+ + G ++
Sbjct: 469 DIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVH 528
Query: 241 ------QSMTRDYGIEPQIEHY---GCIVDL---------------------LSRVGRPE 270
Q M+ + + Y G I D L++ G +
Sbjct: 529 AHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGK 588
Query: 271 EAYDFITNM---KIAPDHIMLGSLLSACKIHG 299
A + M I P+HI + S+L AC G
Sbjct: 589 RALELFGRMVDEGINPNHITMTSVLCACNHAG 620
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 2/150 (1%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D A ++ Y + G +E+A FS + + V W+AMI GL ++G RAL+LF M
Sbjct: 538 SDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRM 597
Query: 108 QRDNVRPNEVTIVCVLSACSQLGAL-ELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
+ + PN +T+ VL AC+ G + E R+ +S ID +I++ R G
Sbjct: 598 VDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGK 657
Query: 167 IDKALQVFEEMK-ERDVTTYNSLIAGLAMH 195
+D A+++ M + + + + +L+ +H
Sbjct: 658 LDDAMELVNSMPFQANASIWGALLGASRVH 687
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 175/441 (39%), Positives = 278/441 (63%), Gaps = 1/441 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM- 107
D+ S +++ Y + G ++ A VFS ++VKD + W +I G +N AL LF +
Sbjct: 431 DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLL 490
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ P+E T+ CVL AC+ L A + GR IH Y+ ++ + V +L++MY++CG +
Sbjct: 491 EEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL 550
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A +F+++ +D+ ++ +IAG MHG EA+ +F +M GI +++FV +L AC
Sbjct: 551 LLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYAC 610
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SH GLVD G+ F M + IEP +EHY CIVD+L+R G +AY FI NM I PD +
Sbjct: 611 SHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATI 670
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
G+LL C+IH ++L E++A+++ + ++G YVL++N YA + KW++ ++R ++ +
Sbjct: 671 WGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQ 730
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
G++K PGCS IE+ ++ F+ GD +P+ E I +++++ + EGYSP T+ L D
Sbjct: 731 RGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALID 790
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
E+ EKE AL HSE+LA+ G+IS+ IRV KNLRVC DCH M K ++ +T+R+I+
Sbjct: 791 AEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIV 850
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
+RD NRFH F++G CSC +W
Sbjct: 851 LRDSNRFHQFKDGHCSCRGFW 871
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 131/281 (46%), Gaps = 35/281 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++HG +LK G S LV Y K A ++FDEM E
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE--------------- 258
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+D + W ++I+G V NG + L +F +M + + TIV
Sbjct: 259 -----------------RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 301
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V + C+ + LGR +HS K L++MYS+CGD+D A VF EM +R
Sbjct: 302 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +Y S+IAG A G + EAV++F EM +GI P T VLN C+ L+D G + +
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 421
Query: 242 SMT-RDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKI 281
+ D G + + + ++D+ ++ G +EA + M++
Sbjct: 422 WIKENDLGFDIFVSN--ALMDMYAKCGSMQEAELVFSEMRV 460
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 145/301 (48%), Gaps = 37/301 (12%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
+++ Y + G +++A VF + + V +T+MI G R G A+ LF EM+ + +
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
P+ T+ VL+ C++ L+ G+ +H ++ ++ + + V AL++MY++CG + +A V
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSHGGL 232
F EM+ +D+ ++N++I G + + + EA+ +F ++ + P + T VL AC+
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 514
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLL 292
D G EI + R+ G +VD+ ++ G ++L +L
Sbjct: 515 FDKGREIHGYIMRN-GYFSDRHVANSLVDMYAKCG-----------------ALLLAHML 556
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
D S D ++ ++ Y G KEA+ + +M++AG++
Sbjct: 557 ------------------FDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEA 598
Query: 353 E 353
+
Sbjct: 599 D 599
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 165/388 (42%), Gaps = 82/388 (21%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+E+ + G + + KL +Y CG+ K+A ++FDE
Sbjct: 112 DGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDE----------------- 154
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
VK++ + W +++ L ++G+ + ++ LF++M V + T
Sbjct: 155 ---------------VKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFS 199
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
CV + S L ++ G +H ++ K + VG +L+ Y + +D A +VF+EM ER
Sbjct: 200 CVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER 259
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF--- 237
DV ++NS+I G +G + + + +F +M+ GI T V V C+ L+ LG
Sbjct: 260 DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVH 319
Query: 238 --------------------------------EIFQSMTRDYGIEPQIEHYGCIVDLLSR 265
+F+ M+ + + Y ++ +R
Sbjct: 320 SIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS-----DRSVVSYTSMIAGYAR 374
Query: 266 VGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTY 322
G EA M+ I+PD + ++L+ C + L G+++ + + + D G
Sbjct: 375 EGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI---KENDLGFD 431
Query: 323 VLLSNA----YASSGKWKEAVQIRAKMK 346
+ +SNA YA G +EA + ++M+
Sbjct: 432 IFVSNALMDMYAKCGSMQEAELVFSEMR 459
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 36/198 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GREIHG +++ G S+R LV++Y KCG A LFD++ D+V+ TVMI Y
Sbjct: 517 KGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS-KDLVSWTVMIAGY 575
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG + A+ LF +M++ + +E++ V
Sbjct: 576 GMHGFGK-------------------------------EAIALFNQMRQAGIEADEISFV 604
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVG--GALINMYSRCGDIDKALQVFEEMK 178
+L ACS G ++ G W + +H + V +++M +R GD+ KA + E M
Sbjct: 605 SLLYACSHSGLVDEG-WRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMP 663
Query: 179 -ERDVTTYNSLIAGLAMH 195
D T + +L+ G +H
Sbjct: 664 IPPDATIWGALLCGCRIH 681
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 75/149 (50%), Gaps = 7/149 (4%)
Query: 94 NGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIV 153
+G + A+ L + ++ P T+ VL C+ +L+ G+ + +++ + ++ +
Sbjct: 74 SGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNL 131
Query: 154 GGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGI 213
G L MY+ CGD+ +A +VF+E+K +N L+ LA G ++ +F++M++ G+
Sbjct: 132 GSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGV 191
Query: 214 RPTKVTFVGVLNACS-----HGGLVDLGF 237
TF V + S HGG GF
Sbjct: 192 EMDSYTFSCVSKSFSSLRSVHGGEQLHGF 220
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 178/441 (40%), Positives = 276/441 (62%), Gaps = 2/441 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+DV + +I+ YV+ G ++ VF + +D V W ++I G ++G+ A++LF M
Sbjct: 201 SDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRM 260
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ N+ T+ VL AC+ + LE GR +H+++ K+ DL I+ AL++MY +CG +
Sbjct: 261 KDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLKYDRDL--ILHNALLDMYCKCGSL 318
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+ A +F M +RDV +++++++GLA +G+S+EA+ +F M +QG+ P VT VGVL AC
Sbjct: 319 EDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFAC 378
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SH GLV+ G+ F+SM R +GI+P+ EH+ C+VDLL R G+ +EA +FI M + PD ++
Sbjct: 379 SHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDSVI 438
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+LL AC++H L A+ +L D G VLLSN YA +W +A + M++
Sbjct: 439 WRTLLGACRMHKNASLAAYAAREILKLEPDDQGARVLLSNTYADLRQWTDAEKPWKAMRD 498
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
G++KEPG S IE+ +H FI GD+ HP + I +++ L +K GY P TE VL D
Sbjct: 499 RGMRKEPGRSWIELEKRVHVFIAGDLSHPCSDTIIQELNRLIGRIKSLGYVPQTEFVLQD 558
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
+ +KE L HSE++AI +G + IR++KNLR+C DCH+ KL++ R I+
Sbjct: 559 LPTEQKEDLLKYHSEKMAIVFGTMHAVDGKPIRIMKNLRICGDCHAFAKLVSKSEGRVIV 618
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
+RD RFHHF++G CSCGDYW
Sbjct: 619 IRDPVRFHHFQDGACSCGDYW 639
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 180/405 (44%), Gaps = 60/405 (14%)
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVR-NGEMARALDLFREMQRDN 111
S + + Y + GL+++A +F + V++ V WT ++ L +G AL M+RD
Sbjct: 107 SNSLASMYAKFGLLDDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDG 166
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
V PN T VL AC+ G L +H+ K +D + V +LI+ Y + GD+D
Sbjct: 167 VAPNAYTFSSVLGACTTPGMLTA---VHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGR 223
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
+VF+EM RD+ +NS+IAG A G + A+E+F M + G + T VL AC+
Sbjct: 224 RVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMV 283
Query: 232 LVDLGFEIFQSM---TRDYGIE-----------------------PQ--IEHYGCIVDLL 263
+++ G ++ + RD + PQ + + +V L
Sbjct: 284 MLEAGRQVHAHVLKYDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGL 343
Query: 264 SRVGRPEEA---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQI---AKRLLDCRSA 317
++ G+ EA +D + + +AP+H+ + +L AC G ++ G KRL +
Sbjct: 344 AQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQP- 402
Query: 318 DSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQ 377
+ + + + +GK EAV+ M S+E ++ I +LG R +
Sbjct: 403 EREHHNCMVDLLGRAGKLDEAVEFIHGM------------SLEPDSVIWRTLLGACRMHK 450
Query: 378 REQIYKKMQELKQIVKLEGYSPSTEVVLH----DIEDW---EKEW 415
+ ++I+KLE V+L D+ W EK W
Sbjct: 451 NASL--AAYAAREILKLEPDDQGARVLLSNTYADLRQWTDAEKPW 493
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 188/488 (38%), Positives = 282/488 (57%), Gaps = 32/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G++IH +++ N LV++Y KC K A
Sbjct: 290 QGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPA----------------------- 326
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
E AF R+ K+ + WTA+I G +NG A+ +F EMQRD + P++ T+
Sbjct: 327 ------ETAFR---RMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLG 377
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
V+S+C+ L +LE G H + V AL+ +Y +CG I+ A ++F+EM
Sbjct: 378 SVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFH 437
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++ +L+ G A GR+ E +++F +M+ + ++P VTF+GVL+ACS G V+ G F
Sbjct: 438 DQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYF 497
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM +D+GI P +HY C++DL SR GR +EA +FI M + PD I G+LLSAC++ G
Sbjct: 498 HSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGD 557
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+++G+ A+ LL+ + +YVLL + +A+ G W + Q+R M++ V+KEPGCS I+
Sbjct: 558 MEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEPGCSWIK 617
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
N++H F D HP + IY+K++ L + EGY P VLHD+ D +K ++ H
Sbjct: 618 YKNKVHIFSADDQSHPFSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVSHH 677
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+LAI +GL+ IR+VKNLRVC DCH+ KLI+ IT R I+VRD RFH F NG
Sbjct: 678 SEKLAIAFGLMFVPHEMPIRIVKNLRVCVDCHNATKLISKITGRDILVRDAVRFHKFSNG 737
Query: 481 TCSCGDYW 488
CSCGD+W
Sbjct: 738 VCSCGDFW 745
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 179/383 (46%), Gaps = 44/383 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+ H Q+L+LG N LV +Y K G DA ++FDEM + +VV MI +
Sbjct: 159 GRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEM-DGKNVVMYNTMITGLL 217
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+VE A +F + +D + WT M+ G +NG ++AL+ FR M+ + ++ T
Sbjct: 218 RCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGS 277
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+AC L ALE G+ IH+Y+ + D N VG AL++MYS+C I A F M ++
Sbjct: 278 ILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKN 337
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE--- 238
+ ++ +LI G +G S EAV +F EM GI P T V+++C++ ++ G +
Sbjct: 338 IISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHC 397
Query: 239 ------------IFQSMTRDYGIEPQIE---------------HYGCIVDLLSRVGRPEE 271
+ ++ YG IE + +V ++ GR +E
Sbjct: 398 LALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKE 457
Query: 272 AYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT------Y 322
D M + PD + +LSAC G ++ G + D G Y
Sbjct: 458 TIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSM----QKDHGIVPIDDHY 513
Query: 323 VLLSNAYASSGKWKEAVQIRAKM 345
+ + Y+ SG+ KEA + +M
Sbjct: 514 TCMIDLYSRSGRLKEAEEFIKQM 536
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 162/335 (48%), Gaps = 14/335 (4%)
Query: 24 LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
L+ YGK G A ++FD P N + +++ L+++ +F+ + +DTV
Sbjct: 47 LLTAYGKAGRHARARRVFDATPHPN-LFTYNALLSTLAHARLLDDMDSLFASMAQRDTVS 105
Query: 84 WTAMIDGLVRNGEMARALDLFREMQR--DNVRPNEVTIVCVLSACSQLGALELGRWIHSY 141
+ A+I G G ARA+ L+ + R +VRP+ +T+ ++ A S LG LGR H
Sbjct: 106 YNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQ 165
Query: 142 MGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEA 201
+ + +N VG L+ MY++ G I A +VF+EM ++V YN++I GL EA
Sbjct: 166 ILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEA 225
Query: 202 VEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVD 261
+F M ++ +T+ ++ + GL F+ M R GI +G I+
Sbjct: 226 RRLFEVMTDRDC----ITWTTMVTGFTQNGLESQALNFFRRM-RFQGIAIDQYTFGSILT 280
Query: 262 ---LLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSAD 318
LS + + ++ + +I D++ +GS L + + A R + C++
Sbjct: 281 ACGALSALEQGKQIHAYIIRTHY-DDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNII 339
Query: 319 SGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
S T +++ Y +G +EAV++ ++M+ G+ +
Sbjct: 340 SWTALIV--GYGQNGCSEEAVRVFSEMQRDGIDPD 372
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 190/492 (38%), Positives = 289/492 (58%), Gaps = 21/492 (4%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H LK G L+ +Y KC + A +F M E D+V+ T MI +
Sbjct: 390 GRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNE-KDIVSWTSMITAHS 448
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPNEVTIV 120
+ G + A E F + K+ + W AM+ +++G L ++ M +VRP+ VT V
Sbjct: 449 QVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYV 508
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+ C+ LGA +LG I K + L+ V A+I MYS+CG I +A +VF+ + +
Sbjct: 509 TLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVK 568
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D+ ++N++I G + HG +A+E+F +++ +G +P +++V VL+ CSH GLV G F
Sbjct: 569 DIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYF 628
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
M R + I P +EH+ C+VDLL R G EA D I M + P + G+LLSACKIHG
Sbjct: 629 DMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGN 688
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+L E AK + + S DSG+Y+L++ YA +GK ++ QIR M++ G++K PG S +E
Sbjct: 689 NELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWME 748
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGY----SPSTEVVLHDIEDWEKEWA 416
VNN++H F D+ HPQ I KK+ EL + + GY SP +E+ H
Sbjct: 749 VNNKVHVFKADDVSHPQVIAIRKKLDELMEKIARLGYVRTDSPRSEI--H---------- 796
Query: 417 LAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHH 476
HSE+LA+ +GL+S + I ++KNLR+C DCH++IKLI+++T R+ ++RD RFHH
Sbjct: 797 ---HSEKLAVAFGLMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTGREFVIRDAVRFHH 853
Query: 477 FENGTCSCGDYW 488
F G+CSCGDYW
Sbjct: 854 FNGGSCSCGDYW 865
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 139/301 (46%), Gaps = 37/301 (12%)
Query: 6 HGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGL 65
HG+++ +GL S + L+ Y CG DA +L +V+ VM+N YV+ G
Sbjct: 27 HGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDIAHPNVITHNVMLNGYVKLGR 86
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTIVCVLS 124
+ +A E+F R+ +D W ++ G ++ + +L+ F M R + PN T +
Sbjct: 87 LSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMK 146
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD------------------ 166
+C LG L + + K + V AL++M+ RCG
Sbjct: 147 SCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFC 206
Query: 167 -------------IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGI 213
+D AL++F+ M ERDV ++N +++ L+ GR EA++M +M ++G+
Sbjct: 207 RNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGV 266
Query: 214 RPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHY--GCIVDLLSRVGRPEE 271
R T+ L AC+ + G ++ + R+ P I+ Y +V+L ++ G +E
Sbjct: 267 RLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNL---PCIDPYVASALVELYAKCGCFKE 323
Query: 272 A 272
A
Sbjct: 324 A 324
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 119/224 (53%), Gaps = 1/224 (0%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
++ G V K G + + LV+++ +CG A +LF + E +++++ YV+
Sbjct: 159 QLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVG-YVKT 217
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
V++A E+F + +D V W M+ L ++G + ALD+ +MQ VR + T L
Sbjct: 218 YGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSL 277
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
+AC++L +L G+ +H+ + ++ ++ V AL+ +Y++CG +A VF + +R+
Sbjct: 278 TACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNV 337
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+ LIAG HG E+VE+F +M + + + +++ C
Sbjct: 338 AWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGC 381
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 150 NHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
N I ++N Y + G + A+++F M RDV ++N+L++G + + ++E F M
Sbjct: 70 NVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMH 129
Query: 210 NQG-IRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGR 268
G P TF + +C G L ++ M + +G + + +VD+ R G
Sbjct: 130 RSGDSSPNAFTFAYAMKSCGALGERSLALQLL-GMVQKFGSQDDSDVAAALVDMFVRCGT 188
Query: 269 PEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLL 325
+ A +K I + ML + + L+L + + +R D ++ ++
Sbjct: 189 VDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPER-------DVVSWNMM 241
Query: 326 SNAYASSGKWKEAVQIRAKMKEAGVQ 351
+A + SG+ +EA+ + M+ GV+
Sbjct: 242 VSALSQSGRVREALDMVVDMQSKGVR 267
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 192/489 (39%), Positives = 283/489 (57%), Gaps = 34/489 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++HG VL+ G ++ S L++ YGKC + + + +F EM
Sbjct: 228 GMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEM----------------- 270
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K+ V W +++ V+N E +A L+ ++D V ++ I
Sbjct: 271 ---------------GTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISS 315
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLSAC+ + LELGR IH++ K ++ VG AL++MY +CG I+ + Q F+EM E++
Sbjct: 316 VLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKN 375
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTK--VTFVGVLNACSHGGLVDLGFEI 239
+ T NSLI G A G+ A+ +F EM +G PT +TFV +L+ACS G V+ G +I
Sbjct: 376 LVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKI 435
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F SM YGIEP EHY CIVD+L R G E AY+FI M I P + G+L +AC++HG
Sbjct: 436 FDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHG 495
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
K QLG A+ L DSG +VLLSN +A++G+W EA +R ++K G++K G S I
Sbjct: 496 KPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWI 555
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
V N++H F D H ++I + +L+ ++ GY P ++ L+D+E+ EK ++
Sbjct: 556 TVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSH 615
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LA+ +GL+S IR+ KNLR+C DCHS K ++ KR+IIVRD NRFH F++
Sbjct: 616 HSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKD 675
Query: 480 GTCSCGDYW 488
G CSC DYW
Sbjct: 676 GICSCKDYW 684
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 1/227 (0%)
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
+ +IN Y + E+A V ++ V WT++I GL +NG + AL F EM+R+ V
Sbjct: 45 ANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGV 104
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
PN+ T C A + L G+ IH+ K L+ VG + +MY + D A +
Sbjct: 105 VPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARK 164
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
+F+E+ ER++ T+N+ I+ GR EA+E F E P +TF LNACS
Sbjct: 165 LFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLH 224
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM 279
++LG ++ + R G + + ++D + + + T M
Sbjct: 225 LNLGMQLHGLVLRS-GFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEM 270
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 139/312 (44%), Gaps = 10/312 (3%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV + Y + L ++A ++F + ++ W A I V +G A++ F E +
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFR 201
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
R + PN +T L+ACS L LG +H + + D + V LI+ Y +C I
Sbjct: 202 RIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIR 261
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+ +F EM ++ ++ SL+A + +A ++ + + VL+AC+
Sbjct: 262 SSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACA 321
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG---RPEEAYDFITNMKIAPDH 285
++LG I + +E I +VD+ + G E+A+D + + +
Sbjct: 322 GMAGLELGRSIHAHAVKAC-VERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRN 380
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRLLDC-RSADSGTYVLLSNAYASSGKWKEAVQIRAK 344
++G ++ L L E++A R C + + T+V L +A + +G + ++I
Sbjct: 381 SLIGGYAHQGQVDMALALFEEMAPR--GCGPTPNYMTFVSLLSACSRAGAVENGMKIFDS 438
Query: 345 MKEA-GVQKEPG 355
M+ G+ EPG
Sbjct: 439 MRSTYGI--EPG 448
>gi|357117491|ref|XP_003560501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Brachypodium distachyon]
Length = 652
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 191/478 (39%), Positives = 289/478 (60%), Gaps = 3/478 (0%)
Query: 13 GLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEV 72
G +R L+ Y CG+ A ++FDEM DV+ T ++ Y + +A EV
Sbjct: 176 GFDKHRFVENSLIGAYIACGDVGAARKVFDEM-VVKDVICWTSIVVAYSRSRDMGSAEEV 234
Query: 73 FSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGAL 132
F + VKD V WTAM+ G +N +AL++F M + +EV++ +SAC+QLGA+
Sbjct: 235 FGQCPVKDMVAWTAMVTGYAQNAMPMKALEVFDRMTALGIGIDEVSLTGAISACAQLGAV 294
Query: 133 ELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGL 192
+ W+ + +N +VG L++MY++CG ID+A +VF+ M+E++V TY+S++ GL
Sbjct: 295 KRAAWVQEIAEMNGFGMNVVVGSGLVDMYAKCGLIDEACKVFDGMQEKNVYTYSSMVVGL 354
Query: 193 AMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEP 251
A HGR+ EA+ +F++M+ + + P VTF+GVL ACSH G+V G F M YGI P
Sbjct: 355 ASHGRAREAIALFKDMVRRADVAPNHVTFIGVLTACSHAGMVTDGRYYFAQMKDKYGILP 414
Query: 252 QIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRL 311
+HY C+VDLL R G +EA D + +M + P + G+LL AC+IHGK ++ + A+ L
Sbjct: 415 SADHYTCMVDLLGRAGLVDEALDLVRSMTVEPHGGVWGALLGACRIHGKTEVAKVAAEHL 474
Query: 312 LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNE-IHEFIL 370
G YVLLSN A++GKW E ++R M+ ++K P S E + +H+F
Sbjct: 475 FKLEPEGIGNYVLLSNTLAAAGKWDEVSKVRKVMRSRRLKKVPAVSWFEGRDGLVHQFFA 534
Query: 371 GDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGL 430
GD HP+ +I K + EL +K GY P +++D+ + EKE L HSE+LA+ +GL
Sbjct: 535 GDNSHPRTREIKKALLELVAKLKHAGYVPILSSIVYDVSNEEKERLLMGHSEKLALLFGL 594
Query: 431 ISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
++ TIR+VKNLR+C+DCH I+L++ +IIVRD RFHHF++G CSCG +W
Sbjct: 595 LTLGSRCTIRIVKNLRICDDCHLFIRLVSRFEPVEIIVRDNMRFHHFKDGECSCGGFW 652
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 177/438 (40%), Positives = 275/438 (62%), Gaps = 2/438 (0%)
Query: 53 STVMINCY--VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD 110
S ++N Y E G ++ A + + + W +I+G +G AL+ ++ +Q +
Sbjct: 250 SNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLE 309
Query: 111 NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
+ ++VT + VL+AC+ +L G+ IHS + +D + IV AL NMYS+CG ++ A
Sbjct: 310 AIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENA 369
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
++F+ M R ++N ++ A HG S E +++ R+M +G++ +TFV VL++CSH
Sbjct: 370 RRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHA 429
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGS 290
GL+ G + F S+ D GIE + EHYGC+VDLL R G+ +EA +I+ M P+ + S
Sbjct: 430 GLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWAS 489
Query: 291 LLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
LL AC++H L G+ A++LL+ +S V+LSN Y+ G WK A ++R M V
Sbjct: 490 LLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRV 549
Query: 351 QKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIED 410
+K PG SSI+V N++HEF + D HP+ +IY K++EL ++ GY P T++VLHD+++
Sbjct: 550 KKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDE 609
Query: 411 WEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRD 470
+KE LA HSE+LAI +GLIST +++ + KNLRVC DCH+ K I+ IT R+I+VRD
Sbjct: 610 EQKESLLAYHSEKLAIAFGLISTPEKSSLHIFKNLRVCEDCHTATKFISKITGREIVVRD 669
Query: 471 RNRFHHFENGTCSCGDYW 488
+RFHHF +G+CSC DYW
Sbjct: 670 NHRFHHFRDGSCSCKDYW 687
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 177/393 (45%), Gaps = 61/393 (15%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV +T ++N Y + G + +A +VF + + W +MI + A +F+ MQ
Sbjct: 44 DVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQ 103
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ R + VT + +L AC L+ G+ + + + +L+ VG ALI MY+RC +
Sbjct: 104 HEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPE 163
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A QVF MK++++ T++++I A HG EA+ FR M +GI P +VTF+ +LN +
Sbjct: 164 NAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFT 223
Query: 229 -----------------HG--------------------GLVDLGFEIFQSMTRDYGIEP 251
HG G +D+ I Q M E
Sbjct: 224 TPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMD-----EQ 278
Query: 252 QIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIA 308
QI + +++ + GR EA + ++ I D + S+L+AC L G+ I
Sbjct: 279 QITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIH 338
Query: 309 KRLLDCRSADSGTYV--LLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIH 366
++C DS V L+N Y+ G + A +I M P S++ N +
Sbjct: 339 SNAVEC-GLDSDVIVKNALTNMYSKCGSMENARRIFDSM--------PIRSAVSWNGMLQ 389
Query: 367 EFILGDIRHPQREQIYKKMQELKQI-VKLEGYS 398
+ +H + E++ K +++++Q VKL G +
Sbjct: 390 AY----AQHGESEEVLKLIRKMEQEGVKLNGIT 418
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 130/259 (50%), Gaps = 7/259 (2%)
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M + V+ N +T + VL++ AL G++IHS + + L+ V AL+N Y++CG
Sbjct: 1 MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+ A +VF+ M R V T+NS+I+ ++ RS EA +F+ M ++G R +VTF+ +L+A
Sbjct: 61 LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
C + + G + +S++ + E + ++ + +R PE A MK + I
Sbjct: 121 CVNPENLQHGKHVRESIS-ETSFELDLFVGTALITMYARCRSPENAAQVFGRMK-QKNLI 178
Query: 287 MLGSLLSACKIHGKLQLGEQIAK-RLLDCRS--ADSGTYVLLSNAYASSGKWKEAVQIRA 343
++++A HG GE + R++ + T++ L N + + +E +I
Sbjct: 179 TWSAIITAFADHG--HCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHL 236
Query: 344 KMKEAGVQKEPGCSSIEVN 362
+ E G+ S+ VN
Sbjct: 237 LITEHGLDDTTTMSNALVN 255
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 34/197 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+ IH ++ GL S+ + L +Y KCG ++A ++FD MP
Sbjct: 333 EGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMP--------------- 377
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++ V W M+ ++GE L L R+M+++ V+ N +T V
Sbjct: 378 -----------------IRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFV 420
Query: 121 CVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM-K 178
VLS+CS G + G ++ HS I++ G L+++ R G + +A + +M
Sbjct: 421 SVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPS 480
Query: 179 ERDVTTYNSLIAGLAMH 195
E ++ T+ SL+ +H
Sbjct: 481 EPEIVTWASLLGACRVH 497
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 188/537 (35%), Positives = 308/537 (57%), Gaps = 51/537 (9%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN------------- 48
G+ +H +K + L+++Y KCG+ A+++F++M E N
Sbjct: 132 GKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTR 191
Query: 49 ---------------------DVVASTVMINCYVEHGLVENAFEVFSRVKVKDT-----V 82
DVVA T +++ G ++N +V +K + V
Sbjct: 192 DGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFV 251
Query: 83 CWTAMIDGLVRNGEMARALDLFREMQRDNV----------RPNEVTIVCVLSACSQLGAL 132
C A++D + G M A +F M ++ +P+ T+ C+L AC+ L AL
Sbjct: 252 C-NALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACILPACASLSAL 310
Query: 133 ELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGL 192
E G+ IH Y+ ++ + V AL+++Y +CG + A +F+ + +D+ ++ +IAG
Sbjct: 311 ERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGY 370
Query: 193 AMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQ 252
MHG EA+ F EM + GI P +V+F+ +L ACSH GL++ G+ F M D+ IEP+
Sbjct: 371 GMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPK 430
Query: 253 IEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
+EHY C+VDLLSR G +AY FI + IAPD + G+LL C+I+ ++L E++A+R+
Sbjct: 431 LEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVF 490
Query: 313 DCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILG- 371
+ ++G YVLL+N YA + KW+E ++R K+ + G++K PGCS IE+ ++ F+ G
Sbjct: 491 ELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGN 550
Query: 372 DIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLI 431
+ HP ++I ++++++ +K EGY P T+ L + ++ +KE AL HSE+LA+ +GL+
Sbjct: 551 NSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLL 610
Query: 432 STKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
+ P TIRV KNLRVC DCH M K ++ T+R+I++RD NRFHHF++G CSC +W
Sbjct: 611 TLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 667
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 179/395 (45%), Gaps = 65/395 (16%)
Query: 23 KLVELYGKCGEFKDAMQLFDEMPECN---------------DVVASTVMINCYVEHGL-- 65
KLV Y CG+ K+ ++FD M + N D S + VE G+
Sbjct: 1 KLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEG 60
Query: 66 --VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
E+A E+F ++ +D + W +MI G V NG R L ++++M + + TI+ VL
Sbjct: 61 KRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVL 120
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
C++ G L LG+ +HS K + L++MYS+CGD+D AL+VFE+M ER+V
Sbjct: 121 VGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVV 180
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSM 243
++ S+IAG G S A+ + ++M +G++ V +L+AC+ G +D G ++ +
Sbjct: 181 SWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI 240
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM-------------KIAPDHIMLGS 290
+ + + ++D+ ++ G E A + M ++ PD +
Sbjct: 241 KAN-NMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMAC 299
Query: 291 LLSACKIHGKLQLGEQI-------------------------------AKRLLD-CRSAD 318
+L AC L+ G++I A+ L D S D
Sbjct: 300 ILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 359
Query: 319 SGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
++ ++ Y G EA+ +M++AG++ +
Sbjct: 360 LVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPD 394
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 184/491 (37%), Positives = 285/491 (58%), Gaps = 4/491 (0%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMI 57
E + ++L LG + N T L++ G QL + +V + ++
Sbjct: 189 EALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLL 248
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y + A +F+ + K+ V W A+I G R GE + LF +M R P
Sbjct: 249 DMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHF 308
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T V +AC+ G+LE G+W+H+++ K +G LI+MY++ G I A +VF +
Sbjct: 309 TYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRL 368
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
++D+ ++NS+I+G A HG EA+++F +M+ ++P ++TF+ VL ACSH GL+D G
Sbjct: 369 VKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQ 428
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F+ M + + IE Q+ H+ +VDLL R GR EA FI M I P + G+LL +C++
Sbjct: 429 YYFELM-KKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRM 487
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
H + LG A+++ + DSG +VLLSN YAS+G+ +A ++R MKE+GV+KEP CS
Sbjct: 488 HKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACS 547
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
+E+ NE+H F+ D HP RE+I + +++ +K GY P T VL + ++E L
Sbjct: 548 WVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKL 607
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LA+ + ++ T P TIR+ KN+R+C DCHS K + + R+IIVRD NRFHHF
Sbjct: 608 QYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHF 667
Query: 478 ENGTCSCGDYW 488
+G CSC DYW
Sbjct: 668 LHGMCSCRDYW 678
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 140/266 (52%), Gaps = 6/266 (2%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D+V ++N Y + G +E A ++F ++ KD V WT +I G ++G+ + AL LF +M
Sbjct: 138 DDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKM 197
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+PNE T+ +L A + GR +H++ K+ D+N VG +L++MY+R +
Sbjct: 198 LHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHM 257
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+A +F + ++V ++N+LIAG A G + +F +M+ QG PT T+ V AC
Sbjct: 258 REAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTAC 317
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
+ G ++ G + + + G +P ++D+ ++ G ++A + + D +
Sbjct: 318 ASSGSLEQGKWVHAHVIKSGG-QPIAYIGNTLIDMYAKSGSIKDAKKVFRRL-VKQDIVS 375
Query: 288 LGSLLSACKIHG----KLQLGEQIAK 309
S++S HG LQL EQ+ K
Sbjct: 376 WNSIISGYAQHGLGAEALQLFEQMLK 401
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 123/245 (50%), Gaps = 9/245 (3%)
Query: 111 NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
++ P +L+ C+ L L+ GR IH+++ + + ++ ++NMY++CG +++A
Sbjct: 100 SLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEA 159
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
+F++M +D+ ++ LI+G + G++ EA+ +F +M++ G +P + T +L A G
Sbjct: 160 QDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTG 219
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGS 290
G ++ + + YG + + ++D+ +R EA I N A + + +
Sbjct: 220 PSDHHGRQL-HAFSLKYGYDMNVHVGSSLLDMYARWAHMREA-KVIFNSLAAKNVVSWNA 277
Query: 291 LLSACKIHGKLQLGEQIAKRLLD-CRSADSGTYVLLSNAY---ASSGKWKEAVQIRAKMK 346
L++ H + GE + + L R T+ S+ + ASSG ++ + A +
Sbjct: 278 LIAG---HARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVI 334
Query: 347 EAGVQ 351
++G Q
Sbjct: 335 KSGGQ 339
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 192/489 (39%), Positives = 283/489 (57%), Gaps = 34/489 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++HG VL+ G ++ S L++ YGKC + + + +F EM
Sbjct: 178 GMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEM----------------- 220
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K+ V W +++ V+N E +A L+ ++D V ++ I
Sbjct: 221 ---------------GTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISS 265
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLSAC+ + LELGR IH++ K ++ VG AL++MY +CG I+ + Q F+EM E++
Sbjct: 266 VLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKN 325
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTK--VTFVGVLNACSHGGLVDLGFEI 239
+ T NSLI G A G+ A+ +F EM +G PT +TFV +L+ACS G V+ G +I
Sbjct: 326 LVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKI 385
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F SM YGIEP EHY CIVD+L R G E AY+FI M I P + G+L +AC++HG
Sbjct: 386 FDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHG 445
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
K QLG A+ L DSG +VLLSN +A++G+W EA +R ++K G++K G S I
Sbjct: 446 KPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWI 505
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
V N++H F D H ++I + +L+ ++ GY P ++ L+D+E+ EK ++
Sbjct: 506 TVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSH 565
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LA+ +GL+S IR+ KNLR+C DCHS K ++ KR+IIVRD NRFH F++
Sbjct: 566 HSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKD 625
Query: 480 GTCSCGDYW 488
G CSC DYW
Sbjct: 626 GICSCKDYW 634
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 104/213 (48%), Gaps = 1/213 (0%)
Query: 67 ENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSAC 126
E+A V ++ V WT++I GL +NG + AL F EM+R+ V PN+ T C A
Sbjct: 9 ESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAV 68
Query: 127 SQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYN 186
+ L G+ IH+ K L+ VG + +MY + D A ++F+E+ ER++ T+N
Sbjct: 69 ASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWN 128
Query: 187 SLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRD 246
+ I+ GR EA+E F E P +TF LNACS ++LG ++ + R
Sbjct: 129 AFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRS 188
Query: 247 YGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM 279
G + + ++D + + + T M
Sbjct: 189 -GFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEM 220
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 139/312 (44%), Gaps = 10/312 (3%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV + Y + L ++A ++F + ++ W A I V +G A++ F E +
Sbjct: 92 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFR 151
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
R + PN +T L+ACS L LG +H + + D + V LI+ Y +C I
Sbjct: 152 RIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIR 211
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+ +F EM ++ ++ SL+A + +A ++ + + VL+AC+
Sbjct: 212 SSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACA 271
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG---RPEEAYDFITNMKIAPDH 285
++LG I + +E I +VD+ + G E+A+D + + +
Sbjct: 272 GMAGLELGRSIHAHAVKAC-VERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRN 330
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRLLDC-RSADSGTYVLLSNAYASSGKWKEAVQIRAK 344
++G ++ L L E++A R C + + T+V L +A + +G + ++I
Sbjct: 331 SLIGGYAHQGQVDMALALFEEMAPR--GCGPTPNYMTFVSLLSACSRAGAVENGMKIFDS 388
Query: 345 MKEA-GVQKEPG 355
M+ G+ EPG
Sbjct: 389 MRSTYGI--EPG 398
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 75/181 (41%), Gaps = 33/181 (18%)
Query: 160 MYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVT 219
MYS+ + A V R+V ++ SLI+GLA +G A+ F EM +G+ P T
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60
Query: 220 FVGVLNACSH-----------------GGLVDL-----GFEIF-QSMTRDYG-------I 249
F A + G ++D+ F+++ ++ RD
Sbjct: 61 FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120
Query: 250 EPQIEHYGCIVDLLSRVGRPEEAYD-FITNMKIA--PDHIMLGSLLSACKIHGKLQLGEQ 306
E +E + + GRP EA + FI +I P+ I + L+AC L LG Q
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 180
Query: 307 I 307
+
Sbjct: 181 L 181
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 176/440 (40%), Positives = 280/440 (63%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
+V +T +++ Y + GL+++A VF + + V W++M G V+N +AL LFR+
Sbjct: 199 NVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAW 258
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
++ ++ + V+ AC+ L A+ G+ +++ + K N V +LI+MY++CG I+
Sbjct: 259 ETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIE 318
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
++ +VF ++++R+V +N++I+GL+ H RS+E + +F +M G+ P VTFV VL+AC
Sbjct: 319 ESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACG 378
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLV G + F MT+++ + P + HY C+VD LSR G+ EAYD I+ + M
Sbjct: 379 HMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMW 438
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
GSLL++C+ HG L+L E AK+L D +SG Y+LLSN YA++GKW E ++R +KE+
Sbjct: 439 GSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKES 498
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
V+KE G S IE+ +++H F++G+ HP+ +IY K+ E+ ++ GY T+ LH +
Sbjct: 499 DVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHDLHQV 558
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
+ K+ L HSE+LA GL+ P IR++KNLR+C DCHS +KL + R +IV
Sbjct: 559 GESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLASKFFCRDVIV 618
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD NRFHHF+NG CSCGD+W
Sbjct: 619 RDTNRFHHFKNGCCSCGDFW 638
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 133/273 (48%), Gaps = 33/273 (12%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ H Q+L +GL+++ T L+ +Y KCG A Q+FDEMP
Sbjct: 82 QGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPS-------------- 127
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ V W MI L +NGE ALDL +MQR+ +E TI
Sbjct: 128 ------------------RSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTIS 169
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL AC+ AL + +H++ K +DLN V AL+++Y++CG + A+ VFE M +R
Sbjct: 170 SVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDR 229
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
V T++S+ AG + +A+ +FR+ G++ + V+ AC+ + G ++
Sbjct: 230 SVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQV- 288
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAY 273
++ G I ++D+ ++ G EE+Y
Sbjct: 289 NALLSKSGFCSNIFVASSLIDMYAKCGGIEESY 321
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 2/166 (1%)
Query: 33 EFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLV 92
E K L + C+++ ++ +I+ Y + G +E +++VF V+ ++ V W AMI GL
Sbjct: 284 EGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLS 343
Query: 93 RNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGK-HRIDLNH 151
R+ + LF +MQ+ + PN+VT V VLSAC +G ++ G+ M K H + N
Sbjct: 344 RHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNV 403
Query: 152 IVGGALINMYSRCGDIDKALQVFEEMK-ERDVTTYNSLIAGLAMHG 196
+++ SR G I +A + ++ + + SL+A HG
Sbjct: 404 FHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHG 449
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 60/107 (56%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L C++ L G+ H+ + + + + LINMYS+CG +D A QVF+EM R
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+ ++N++I L +G EA+++ +M +G ++ T VL AC+
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACA 176
>gi|357131283|ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Brachypodium distachyon]
Length = 654
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 187/439 (42%), Positives = 278/439 (63%), Gaps = 4/439 (0%)
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN- 111
+T +I+CY + G+V A VF+ + ++ V W+AMI +N A A++LF++M +
Sbjct: 217 ATTLIDCYAKLGIVRYAESVFAAMPERNVVSWSAMIGCYAKNERPADAIELFKDMMASDA 276
Query: 112 -VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
+ PN +TIV VL+AC+ + AL G+ +H+Y+ + D V AL+ MY RCG ++
Sbjct: 277 DLVPNSITIVSVLNACAGVNALSHGKLLHAYILRRGFDSLVSVLNALMAMYMRCGCLEVG 336
Query: 171 LQVFEEM-KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH 229
+F+ + RDV ++NSLI+G MHG EAV++F EMI+ G P+ +TF+ VL ACSH
Sbjct: 337 RHIFKWIGHRRDVVSWNSLISGYGMHGFGPEAVQVFEEMIHVGFSPSIITFISVLGACSH 396
Query: 230 GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLG 289
GLV+ G +F+SM +YG+ P+ EHY C+VDLL R G+ +EA + I +M I P + G
Sbjct: 397 AGLVNEGKMLFESMV-EYGVTPRAEHYACMVDLLGRAGQLDEAMELIRSMHIEPSPQVWG 455
Query: 290 SLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
+LL AC+IHG ++ E L D ++G YVLL++ YA + + ++ ++E
Sbjct: 456 ALLGACRIHGHVEYAEIACSHLFDLEPRNAGNYVLLADIYARAKLHNQVGVLKELLEEHA 515
Query: 350 VQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIE 409
++K GCS IEV ++H F D ++P EQ+ + E +K +GY P T +VL+DIE
Sbjct: 516 LEKVTGCSWIEVKKKLHSFTSVDNKNPPVEQLQALIGEFVAQMKNQGYVPDTGIVLYDIE 575
Query: 410 DWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVR 469
EKE L HSE+LA+ +GLI+T IR+ KNLR+C DCHS+ K I+ T+R+I+VR
Sbjct: 576 GEEKERILIGHSEKLAVAFGLINTCSGEVIRITKNLRLCEDCHSVTKFISKFTEREIVVR 635
Query: 470 DRNRFHHFENGTCSCGDYW 488
D NRFHHF +G CSCGDYW
Sbjct: 636 DVNRFHHFRDGVCSCGDYW 654
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 78/196 (39%), Gaps = 32/196 (16%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H +L+ G S S L+ +Y +CG + +F + DVV+ +I+ Y
Sbjct: 301 GKLLHAYILRRGFDSLVSVLNALMAMYMRCGCLEVGRHIFKWIGHRRDVVSWNSLISGYG 360
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG A +V F EM P+ +T +
Sbjct: 361 MHGFGPEAVQV-------------------------------FEEMIHVGFSPSIITFIS 389
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-ER 180
VL ACS G + G+ + M ++ + ++++ R G +D+A+++ M E
Sbjct: 390 VLGACSHAGLVNEGKMLFESMVEYGVTPRAEHYACMVDLLGRAGQLDEAMELIRSMHIEP 449
Query: 181 DVTTYNSLIAGLAMHG 196
+ +L+ +HG
Sbjct: 450 SPQVWGALLGACRIHG 465
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 175/438 (39%), Positives = 275/438 (62%)
Query: 51 VASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD 110
+ T ++N Y + G ++ A + + + W +I+G +G AL+ ++++Q +
Sbjct: 499 LVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLE 558
Query: 111 NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
+ ++VT + VL+AC+ +L G+ IHS + +D + IV AL NMYS+CG ++ A
Sbjct: 559 AIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENA 618
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
++F+ M R ++N ++ A HG S E +++ R+M +G++ +TFV VL++CSH
Sbjct: 619 RRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHA 678
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGS 290
GL+ G + F S+ D GIE + EHYGC+VDLL R G+ +EA +I+ M + P + S
Sbjct: 679 GLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWAS 738
Query: 291 LLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
LL AC++ L G+ A +LL+ +S V+LSN Y+ G WK A ++R M V
Sbjct: 739 LLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRV 798
Query: 351 QKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIED 410
+K PG SSI+V N++HEF + D HP+ +IY K++EL ++ GY P T++VLHD+++
Sbjct: 799 KKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDE 858
Query: 411 WEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRD 470
+KE LA HSE+LAI +GLIST +++ + KNLRVC DCH+ K I+ IT R+I+VRD
Sbjct: 859 EQKESLLAYHSEKLAIAFGLISTPETSSLHIFKNLRVCEDCHTATKFISKITGREIVVRD 918
Query: 471 RNRFHHFENGTCSCGDYW 488
+RFHHF +G+CSC DYW
Sbjct: 919 NHRFHHFRDGSCSCKDYW 936
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 178/391 (45%), Gaps = 59/391 (15%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D+ T +I Y E+A +VF R+K + + W+A+I +G AL FR MQ
Sbjct: 295 DLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQ 354
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
++ + PN VT + +L+ + LE IH + +H +D + AL+N+Y RC D
Sbjct: 355 QEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPD 414
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC- 227
A VF++++ ++ ++NS+I R +A+++FR M QGI+P +V F+ +L AC
Sbjct: 415 DARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACT 474
Query: 228 --SHG--------------------------------GLVDLGFEIFQSMTRDYGIEPQI 253
SHG G +D+ I Q M E QI
Sbjct: 475 IGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMD-----EQQI 529
Query: 254 EHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKR 310
+ +++ + GR EA + ++ I D + S+L+AC L G+ I
Sbjct: 530 TAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSN 589
Query: 311 LLDCRSADSGTYV--LLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEF 368
++C DS V L+N Y+ G + A +I M P S++ N + +
Sbjct: 590 AVEC-GLDSDVIVKNALTNMYSKCGSMENARRIFDSM--------PIRSAVSWNGMLQAY 640
Query: 369 ILGDIRHPQREQIYKKMQELKQI-VKLEGYS 398
+H + E++ K +++++Q VKL G +
Sbjct: 641 ----AQHGESEEVLKLIRKMEQEGVKLNGIT 667
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 126/245 (51%), Gaps = 4/245 (1%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV +T ++N Y + G + +A +VF + + W +MI + A +F+ MQ
Sbjct: 194 DVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQ 253
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
++ R + VT + +L AC L+ G+ + + + +L+ VG ALI MY+RC +
Sbjct: 254 QEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPE 313
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA-C 227
A QVF MK+ ++ T++++I A HG EA+ FR M +GI P +VTF+ +LN
Sbjct: 314 DAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFT 373
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
+ GL +L + ++G++ +V++ R P++A +++ P+ I
Sbjct: 374 TPSGLEELSR--IHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLEL-PNLIS 430
Query: 288 LGSLL 292
S++
Sbjct: 431 WNSMI 435
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 164/353 (46%), Gaps = 38/353 (10%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G +H L+ G N L+ +YGKCG DA +F+EM E N VV M+ Y
Sbjct: 76 DGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKN-VVTWNAMLGVY 134
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
G CW A++LF M + V+ N +T +
Sbjct: 135 SLQG-----------------CCWKL-------------AVELFTRMLLEGVKANVITFL 164
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL++ AL G++IHS + + L+ V AL+N Y++CG + A +VF+ M R
Sbjct: 165 NVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCR 224
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
V T+NS+I+ ++ RS EA +F+ M +G R +VTF+ +L+AC + + G +
Sbjct: 225 SVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVR 284
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+S++ + E + ++ + +R PE+A MK + I ++++A HG
Sbjct: 285 ESIS-ETSFELDLFVGTALITMYARCRSPEDAAQVFGRMK-QTNLITWSAIITAFADHG- 341
Query: 301 LQLGEQIAK-RLLDCRS--ADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
GE + R++ + T++ L N + + +E +I + E G+
Sbjct: 342 -HCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGL 393
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 157/347 (45%), Gaps = 68/347 (19%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHG 64
IH + + GL + R LV +YG+C DA +FD++
Sbjct: 384 IHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQL-------------------- 423
Query: 65 LVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLS 124
++ + + W +MI V+ AL LFR MQ+ ++P+ V + +L
Sbjct: 424 ------------ELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILG 471
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTT 184
AC+ + +H + + + + +V +L+NMY++ G++D A + +EM E+ +T
Sbjct: 472 ACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITA 531
Query: 185 YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMT 244
+N LI G A+HGRS EA+E ++++ + I KVTF+ VLNAC+ + G ++ S
Sbjct: 532 WNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEG-KMIHSNA 590
Query: 245 RDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLG 304
+ G++ + + ++ S+ G E A +M I SA +G LQ
Sbjct: 591 VECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIR----------SAVSWNGMLQ-- 638
Query: 305 EQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
AYA G+ +E +++ KM++ GV+
Sbjct: 639 -----------------------AYAQHGESEEVLKLIRKMEQEGVK 662
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 132/291 (45%), Gaps = 37/291 (12%)
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
Y G + +A F +++ ++ V W MI AL LF M + V PN +T+
Sbjct: 2 YSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITL 61
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V VL++C L G +H+ + N +V AL+NMY +CG + A VFEEM E
Sbjct: 62 VAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAE 121
Query: 180 RDVTTYNSLIAGLAMHGRSIE-AVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
++V T+N+++ ++ G + AVE+F M+ +G++ +TF+ VLN+
Sbjct: 122 KNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSV----------- 170
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
++P G + S V E + D N + + GSL A K+
Sbjct: 171 ----------VDPDALRKGKFIH--SCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVF 218
Query: 299 GKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
+ CRS GT+ + +AY+ S + EA I +M++ G
Sbjct: 219 DG-----------MPCRSV--GTWNSMISAYSISERSGEAFFIFQRMQQEG 256
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 34/193 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+ IH ++ GL S+ + L +Y KCG ++A ++FD MP
Sbjct: 582 EGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMP--------------- 626
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++ V W M+ ++GE L L R+M+++ V+ N +T V
Sbjct: 627 -----------------IRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFV 669
Query: 121 CVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
VLS+CS G + G ++ HS I++ G L+++ R G + +A + +M
Sbjct: 670 SVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPL 729
Query: 179 ERDVTTYNSLIAG 191
E + T+ SL+
Sbjct: 730 EPGIVTWASLLGA 742
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 43/68 (63%)
Query: 160 MYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVT 219
MYSRCG + A+ F +++ R+V ++N +I+ + + EA+ +F M+ +G+ P +T
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 220 FVGVLNAC 227
V VLN+C
Sbjct: 61 LVAVLNSC 68
>gi|413952609|gb|AFW85258.1| hypothetical protein ZEAMMB73_606432 [Zea mays]
gi|413952610|gb|AFW85259.1| hypothetical protein ZEAMMB73_606432 [Zea mays]
gi|413952611|gb|AFW85260.1| hypothetical protein ZEAMMB73_606432 [Zea mays]
Length = 630
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 198/494 (40%), Positives = 281/494 (56%), Gaps = 47/494 (9%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
++H + +LG+ ++ L++ Y KCG+ A ++FDEMP
Sbjct: 175 QLHATLFRLGVAADVRLMTTLLDSYAKCGDVASARKVFDEMP------------------ 216
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGE-------MARALDLFREMQRDNVRPNE 116
V+D W A++ GL + E R FRE+ PN
Sbjct: 217 --------------VRDVATWNALLAGLAQGTEPNLALLLFRRLAGSFRELPPRE-EPNA 261
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
VT+V LSAC+QLG L+ G +H + N VG ALI+MYS+CG + +AL+VF
Sbjct: 262 VTVVAALSACAQLGTLKDGLAVHEFARTIGAVDNVCVGNALIDMYSKCGSLSRALEVFHS 321
Query: 177 MK--ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
+K +R + +YN+ I L++HG +A+++F EM + I P ++T++ V+ C+H GLVD
Sbjct: 322 IKLEDRTLVSYNATIQALSIHGHGEDALKLFDEMPAR-IEPDEITYLAVMGGCNHAGLVD 380
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
G +F SM + P ++HYG IVDLL R GR EAYD I +M D ++ +LL A
Sbjct: 381 DGRRVFDSMR----VPPNMKHYGTIVDLLGRAGRLAEAYDMIMSMPFPADIVLWQTLLGA 436
Query: 295 CKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
K+HG + L E A +L D S G YVLLSN YAS +W + ++R M+ V+K P
Sbjct: 437 AKMHGNVDLAELAATKLADLGSNVDGDYVLLSNVYASKSRWVDVGRVRDTMRSNDVKKVP 496
Query: 355 GCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKE 414
G S E++ +H+FI GD H + +IY+ + E+ + GY P T VLHDI + EK+
Sbjct: 497 GFSYTEIDGVMHKFINGDKEHMRWREIYRALDEIGSRICALGYEPETSNVLHDIGEEEKQ 556
Query: 415 WALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRF 474
+AL+ HSE+LAI +GLIST P TIRV+KNLR C DCH + KLI+ R II+RDR RF
Sbjct: 557 YALSYHSEKLAIAFGLISTPPGETIRVIKNLRTCGDCHVVAKLISKAYNRVIIIRDRARF 616
Query: 475 HHFENGTCSCGDYW 488
H FE+G CSC DYW
Sbjct: 617 HRFEDGHCSCRDYW 630
>gi|293334801|ref|NP_001169361.1| uncharacterized protein LOC100383228 [Zea mays]
gi|224028917|gb|ACN33534.1| unknown [Zea mays]
Length = 596
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 198/494 (40%), Positives = 281/494 (56%), Gaps = 47/494 (9%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
++H + +LG+ ++ L++ Y KCG+ A ++FDEMP
Sbjct: 141 QLHATLFRLGVAADVRLMTTLLDSYAKCGDVASARKVFDEMP------------------ 182
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGE-------MARALDLFREMQRDNVRPNE 116
V+D W A++ GL + E R FRE+ PN
Sbjct: 183 --------------VRDVATWNALLAGLAQGTEPNLALLLFRRLAGSFRELPPRE-EPNA 227
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE 176
VT+V LSAC+QLG L+ G +H + N VG ALI+MYS+CG + +AL+VF
Sbjct: 228 VTVVAALSACAQLGTLKDGLAVHEFARTIGAVDNVCVGNALIDMYSKCGSLSRALEVFHS 287
Query: 177 MK--ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
+K +R + +YN+ I L++HG +A+++F EM + I P ++T++ V+ C+H GLVD
Sbjct: 288 IKLEDRTLVSYNATIQALSIHGHGEDALKLFDEMPAR-IEPDEITYLAVMGGCNHAGLVD 346
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
G +F SM + P ++HYG IVDLL R GR EAYD I +M D ++ +LL A
Sbjct: 347 DGRRVFDSMR----VPPNMKHYGTIVDLLGRAGRLAEAYDMIMSMPFPADIVLWQTLLGA 402
Query: 295 CKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
K+HG + L E A +L D S G YVLLSN YAS +W + ++R M+ V+K P
Sbjct: 403 AKMHGNVDLAELAATKLADLGSNVDGDYVLLSNVYASKSRWVDVGRVRDTMRSNDVKKVP 462
Query: 355 GCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKE 414
G S E++ +H+FI GD H + +IY+ + E+ + GY P T VLHDI + EK+
Sbjct: 463 GFSYTEIDGVMHKFINGDKEHMRWREIYRALDEIGSRICALGYEPETSNVLHDIGEEEKQ 522
Query: 415 WALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRF 474
+AL+ HSE+LAI +GLIST P TIRV+KNLR C DCH + KLI+ R II+RDR RF
Sbjct: 523 YALSYHSEKLAIAFGLISTPPGETIRVIKNLRTCGDCHVVAKLISKAYNRVIIIRDRARF 582
Query: 475 HHFENGTCSCGDYW 488
H FE+G CSC DYW
Sbjct: 583 HRFEDGHCSCRDYW 596
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 188/489 (38%), Positives = 281/489 (57%), Gaps = 40/489 (8%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +HG +K GL + S L+ +Y K GE +LFDEMP
Sbjct: 132 GMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPR--------------- 176
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K + W AMI+G +NG L+L++EM+ P+ +T+V
Sbjct: 177 -----------------KGLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVG 219
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLS+C+ LGAL +G+ + M N + AL+NMY+RCG++ KA +F+ M +
Sbjct: 220 VLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKS 279
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ ++I G MHG+ AV +F EMI GI+P FV VL+ACSH GL + G + F
Sbjct: 280 VVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFG 339
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M R YG+ P EHY C+VDLL R GR EA + I +M++ D + G+LL ACKIH +
Sbjct: 340 VMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNV 399
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+L E +++++ ++G YVLLSN Y +G + +++R M++ ++K+PGCS +E
Sbjct: 400 ELAELAFEQVIELEPTNTGYYVLLSNVYTEAGNLEGILRVRMLMRKRKLKKDPGCSYVEF 459
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVK-LEGYSPSTEVVLHDIEDWEKEW-ALAI 419
+H F GD HPQ +IYKK+ EL+ +VK L+G +D E E+ ++ +
Sbjct: 460 KGRVHLFFAGDRNHPQTNEIYKKLNELENLVKDLDGCKK------NDHERREEYLNSMGV 513
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LA+ + L++T+ T I ++KNLR+C DCH IKL++ I R+ +VRD RFHHF+N
Sbjct: 514 HSEKLAVAFALLNTRKETEIIIIKNLRICGDCHLFIKLVSKIVDRQFVVRDATRFHHFKN 573
Query: 480 GTCSCGDYW 488
G CSC +YW
Sbjct: 574 GFCSCKEYW 582
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 117/273 (42%), Gaps = 40/273 (14%)
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M R PN T + +C+ L G+ +H ++ K L V +LI+MY +C
Sbjct: 1 MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60
Query: 167 IDKALQVFEEMKE-RDVTT-YNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL 224
ID A ++F+E + R +T YNSL++G A++ R + V +F EM G+ VT +G++
Sbjct: 61 IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120
Query: 225 NACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPE-------------- 270
C G + LG + +G++ C++ + + G +
Sbjct: 121 QPCGIPGNLGLGMCV-HGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGL 179
Query: 271 --------------------EAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKR 310
E Y + + PD + L +LS+C G L +G+++ +R
Sbjct: 180 ITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEV-ER 238
Query: 311 LLDCRSADSGTYV--LLSNAYASSGKWKEAVQI 341
++ S ++ L N YA G K+A I
Sbjct: 239 KMEGFGFSSNPFLNNALVNMYARCGNLKKARDI 271
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 182/442 (41%), Positives = 279/442 (63%), Gaps = 1/442 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D+V +++ Y E G V+ A +F ++ KD V WT+MI V NG AL+LF M
Sbjct: 552 SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLM 611
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ V P+ +++V +LSA + L AL+ G+ IH ++ + L + L++MY+RCG +
Sbjct: 612 KETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTL 671
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+K+ VF ++ +D+ + S+I MHG A+++FR M ++ I P + FV VL AC
Sbjct: 672 EKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYAC 731
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SH GL++ G +SM +Y +EP EHY C+VDLL R EEAY F+ M++ P +
Sbjct: 732 SHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEV 791
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+LL AC+IH +LGE A++LL+ + G YVL+SN YA+ +WK+ ++R +MK
Sbjct: 792 WCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKA 851
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQEL-KQIVKLEGYSPSTEVVLH 406
+G++K PGCS IEV N++H F+ D HPQ +IY K+ ++ +++ K GY T+ VLH
Sbjct: 852 SGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLH 911
Query: 407 DIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKI 466
+ ++ EK L HSERLAI YG+++T ++R+ KNLRVC DCH+ KLI+ +R++
Sbjct: 912 NAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFFEREL 971
Query: 467 IVRDRNRFHHFENGTCSCGDYW 488
++RD NRFHHF+ G CSCGD W
Sbjct: 972 VMRDANRFHHFKGGVCSCGDVW 993
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 163/371 (43%), Gaps = 48/371 (12%)
Query: 1 EGREIHGQVLKLGLRSNR---STRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMI 57
EG+++H ++ N STRL V +YGKCG DA +LFD MP
Sbjct: 132 EGQQVHAHMITSNALFNSVFLSTRL--VFMYGKCGCLVDAEKLFDGMPH----------- 178
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
K W AMI V NGE +L+L+REM+ + +
Sbjct: 179 ---------------------KTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDAC 217
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T C+L AC L G +H K V +++ MY++C D++ A Q+F+ M
Sbjct: 218 TFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRM 277
Query: 178 KER-DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
E+ DV ++NS+I+ + +G+SIEA+ +F EM + P TFV L AC + G
Sbjct: 278 PEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQG 337
Query: 237 FEIFQSMTR-DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
I ++ + Y I + + ++ + +R G+ EA + NM D I S+LS
Sbjct: 338 MFIHATVLKSSYYINVFVAN--ALIAMYARFGKMGEAANIFYNMD-DWDTISWNSMLSGF 394
Query: 296 KIHGKLQLGEQIAKRLLDC-RSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
+G Q + D + D + + A A SG +QI A + G+
Sbjct: 395 VQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLD--- 451
Query: 355 GCSSIEVNNEI 365
S ++V N +
Sbjct: 452 --SDLQVGNSL 460
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 124/264 (46%), Gaps = 32/264 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G E+HG +K G S +V +Y KC + A QLFD MPE DVV+
Sbjct: 235 GAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVS--------- 285
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
W +MI NG+ AL LF EMQ+ ++ PN T V
Sbjct: 286 ----------------------WNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVA 323
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
L AC ++ G +IH+ + K +N V ALI MY+R G + +A +F M + D
Sbjct: 324 ALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWD 383
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
++NS+++G +G EA++ + EM + G +P V + ++ A + G G +I
Sbjct: 384 TISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHA 443
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSR 265
++ G++ ++ +VD+ ++
Sbjct: 444 YAMKN-GLDSDLQVGNSLVDMYAK 466
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 147/304 (48%), Gaps = 7/304 (2%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMI 57
E + G++ K L N T + ++ K M + + + + +V + +I
Sbjct: 301 EALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALI 360
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
Y G + A +F + DT+ W +M+ G V+NG AL + EM+ +P+ V
Sbjct: 361 AMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLV 420
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
++ +++A ++ G G IH+Y K+ +D + VG +L++MY++ + +F++M
Sbjct: 421 AVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKM 480
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
++DV ++ ++IAG A +G A+E+FRE+ +GI + +L ACS L+
Sbjct: 481 PDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVK 540
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
EI + R G+ + G IVD+ G + A ++ D + S++S C +
Sbjct: 541 EIHSYIIRK-GLSDLVLQNG-IVDVYGECGNVDYAARMFELIEFK-DVVSWTSMIS-CYV 596
Query: 298 HGKL 301
H L
Sbjct: 597 HNGL 600
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 38/199 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+EIHG +++ G S LV++Y +CG + + +F+ + D+V T MIN Y
Sbjct: 638 KGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRN-KDLVLWTSMINAY 696
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG C A A+DLFR M+ +++ P+ + V
Sbjct: 697 GMHG------------------CGRA-------------AIDLFRRMEDESIAPDHIAFV 725
Query: 121 CVLSACSQLGALELG-RWIHSYMGKHRID--LNHIVGGALINMYSRCGDIDKALQVFEEM 177
VL ACS G + G R++ S +++++ H V L+++ R +++A Q + M
Sbjct: 726 AVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYV--CLVDLLGRANHLEEAYQFVKGM 783
Query: 178 K-ERDVTTYNSLIAGLAMH 195
+ E + +L+ +H
Sbjct: 784 EVEPTAEVWCALLGACQIH 802
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 183/487 (37%), Positives = 277/487 (56%), Gaps = 31/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H V+KLG S+ L ++Y K G+ + A +F EC +VV+
Sbjct: 226 GRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVS--------- 276
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+T +IDG V ++ + L +F E++R + PNE T
Sbjct: 277 ----------------------YTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSS 314
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
++ AC+ ALE G +H+ + K D + V L++MY +CG ++ A+Q F+E+ +
Sbjct: 315 LIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPT 374
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+NSL++ HG +A++ F M+++G++P +TF+ +L CSH GLV+ G + F
Sbjct: 375 EIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFY 434
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM + YG+ P EHY C++DLL R GR +EA +FI M P+ S L AC+IHG
Sbjct: 435 SMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDK 494
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++G+ A++L+ +SG VLLSN YA+ +W++ +R +M++ V+K PG S ++V
Sbjct: 495 EMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDV 554
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
+ H F D H ++ IY+K+ L +K GY P T+ V D++D KE L HS
Sbjct: 555 GYKTHVFGAEDWSHXRKSAIYEKLDXLLDQIKAAGYVPXTDSVPLDMDDXMKEKLLHRHS 614
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ER+A+ + LIS I V KNLRVC DCHS IK I+ +T RKIIVRD +RFHHF +G+
Sbjct: 615 ERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGS 674
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 675 CSCGDYW 681
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 148/320 (46%), Gaps = 35/320 (10%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
++N Y + G +++A ++F + ++ V WTAMI GL +N + + A+ F M+ P
Sbjct: 46 LVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPT 105
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
+ + AC+ LG++E+G+ +H K I VG L +MYS+CG + A +VFE
Sbjct: 106 QFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFE 165
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS------- 228
EM +D ++ ++I G + G EA+ F++MI++ + + L AC
Sbjct: 166 EMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKF 225
Query: 229 ----HGGLVDLGFE--IF---------------QSMTRDYGIEPQ---IEHYGCIVDLLS 264
H +V LGFE IF +S + +GI+ + + Y C++D
Sbjct: 226 GRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYV 285
Query: 265 RVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSG 320
+ E+ ++ I P+ SL+ AC L+ G Q+ +++ D
Sbjct: 286 ETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPF 345
Query: 321 TYVLLSNAYASSGKWKEAVQ 340
+L + Y G + A+Q
Sbjct: 346 VSSILVDMYGKCGLLEHAIQ 365
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 149/317 (47%), Gaps = 43/317 (13%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H LK G+ S L ++Y KCG DA ++F+EMP C D V+ T MI
Sbjct: 125 GKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP-CKDEVSWTAMI---- 179
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
DG + GE AL F++M + V ++ +
Sbjct: 180 ---------------------------DGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCS 212
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE-R 180
L AC L A + GR +HS + K + + VG AL +MYS+ GD++ A VF E R
Sbjct: 213 TLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECR 272
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+V +Y LI G + + + +F E+ QGI P + TF ++ AC++ ++ G ++
Sbjct: 273 NVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLH 332
Query: 241 -QSMTRDYGIEPQIEHYGCIVDLLSRVGRPE---EAYDFITNMKIAPDHIMLGSLLSACK 296
Q M ++ +P + +VD+ + G E +A+D I + P I SL+S
Sbjct: 333 AQVMKINFDEDPFVS--SILVDMYGKCGLLEHAIQAFDEIGD----PTEIAWNSLVSVFG 386
Query: 297 IHGKLQLGEQIAKRLLD 313
HG + + +R++D
Sbjct: 387 QHGLGKDAIKFFERMVD 403
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 6/138 (4%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G ++H QV+K+ + LV++YGKCG + A+Q FDE+ + + +A +++ +
Sbjct: 327 QGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTE-IAWNSLVSVF 385
Query: 61 VEHGLVENAFEVFSRVKVK----DTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPN 115
+HGL ++A + F R+ + + + + +++ G G + LD F M + V P
Sbjct: 386 GQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPG 445
Query: 116 EVTIVCVLSACSQLGALE 133
E CV+ + G L+
Sbjct: 446 EEHYSCVIDLLGRAGRLK 463
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 186/488 (38%), Positives = 292/488 (59%), Gaps = 33/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR++H V+K G+ SN L+ +Y KCG
Sbjct: 690 KGRDVHSYVIKNGMGSNLPVTNALINMYAKCGS--------------------------- 722
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
VE A VFS++ VKD V W MI G +N AL+LF +MQ+ +P+++T+
Sbjct: 723 -----VEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQK-QFKPDDITMA 776
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
CVL AC+ L AL+ GR IH ++ + + V AL++MY++CG + A +F+ + ++
Sbjct: 777 CVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKK 836
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D+ ++ +IAG MHG EA+ F EM GI P + +F +LNACSH GL++ G++ F
Sbjct: 837 DLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFF 896
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM + G+EP++EHY C+VDLL+R+G +AY FI +M I PD + G LLS C+IH
Sbjct: 897 NSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHD 956
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++L E++A+ + + ++ YV+L+N YA + KW+E ++R +M++ G ++ PGCS IE
Sbjct: 957 VKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIE 1016
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
V + + F+ G+ +HPQ ++I +++L ++ E Y VL + +D EKE H
Sbjct: 1017 VGGKFNIFVAGNSKHPQAKRIDVLLRKLTMQMQNEDYFSMFRYVLINEDDMEKEMIQCGH 1076
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+ A+ +G+++ P T+RV KN RVC DCH M K ++ TKR+I++RD NRFHHF++G
Sbjct: 1077 SEKSAMAFGILNLPPGRTVRVSKNQRVCGDCHEMGKFMSKTTKREIVLRDSNRFHHFKDG 1136
Query: 481 TCSCGDYW 488
CSC D +
Sbjct: 1137 LCSCRDAF 1144
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 183/362 (50%), Gaps = 18/362 (4%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFK--DAMQLFDEMPEC--NDVVASTVMI 57
G EI Q+L LG+ + +T + ++ + G A+ F + C +VV S ++
Sbjct: 555 GLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFG-VKACFSEEVVFSNTLL 613
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y + G + A EVF ++ V WT+ I VR G + A+ LF EMQ VRP+
Sbjct: 614 DMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIY 673
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T+ ++ AC+ +L+ GR +HSY+ K+ + N V ALINMY++CG +++A VF ++
Sbjct: 674 TVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKI 733
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
+D+ ++N++I G + + EA+E+F +M Q +P +T VL AC+ +D G
Sbjct: 734 PVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAALDKGR 792
Query: 238 EIFQSMTRDYGIEPQIEHYGC-IVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
EI + R G + H C +VD+ ++ G A + +M D I +++
Sbjct: 793 EIHGHILRR-GYFSDL-HVACALVDMYAKCGLLVLA-QLLFDMIPKKDLISWTVMIAGYG 849
Query: 297 IHGKLQLGEQIAKRLLDCRSA----DSGTYVLLSNAYASSGKWKEAVQIRAKMK-EAGVQ 351
+HG G + + R A D ++ ++ NA + SG E + M+ E GV+
Sbjct: 850 MHG---FGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVE 906
Query: 352 KE 353
+
Sbjct: 907 PK 908
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 150/345 (43%), Gaps = 66/345 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
E + +HG VLKLG SN + VV S +I Y
Sbjct: 488 ECKRVHGYVLKLGFGSNTA------------------------------VVNS--LIAAY 515
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ G VE+A +F + D V W +MI+G V NG L++F +M V + T+V
Sbjct: 516 FKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLV 575
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL A + +G L LGR +H + K + L++MYS+CG+++ A +VF +M +
Sbjct: 576 SVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDT 635
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+ ++ S IA G +A+ +F EM ++G+RP T +++AC+ +D G ++
Sbjct: 636 TIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVH 695
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGR-------------------------------P 269
+ ++ G+ + ++++ ++ G P
Sbjct: 696 SYVIKN-GMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLP 754
Query: 270 EEAYDFITNM--KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
EA + +M + PD I + +L AC L G +I +L
Sbjct: 755 NEALELFLDMQKQFKPDDITMACVLPACAGLAALDKGREIHGHIL 799
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 126/283 (44%), Gaps = 41/283 (14%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ +H ++ G+ + + KLV +Y CG+ ++FD++ ND V
Sbjct: 387 DGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKI--MNDKV--------- 435
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
W ++ + G ++ LF++MQ+ V N T
Sbjct: 436 ---------------------FLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFT 474
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
CVL + LG ++ + +H Y+ K N V +LI Y + G ++ A +F+E+ E
Sbjct: 475 CVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEP 534
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++NS+I G ++G S +E+F +M+ G+ T V VL A ++ G + LG +
Sbjct: 535 DVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRAL- 593
Query: 241 QSMTRDYGIEP----QIEHYGCIVDLLSRVGRPEEAYDFITNM 279
+G++ ++ ++D+ S+ G A + M
Sbjct: 594 ----HGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKM 632
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 108/238 (45%), Gaps = 26/238 (10%)
Query: 86 AMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKH 145
A I+ G++ A++L + + + N + VL C++ +LE G+ +HS + +
Sbjct: 341 AKINKFCEMGDLRNAIELLTKSKSYELGLN--SYCSVLQLCAEKKSLEDGKRVHSVIISN 398
Query: 146 RIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMF 205
I ++ +G L+ MY CGD+ + ++F+++ V +N L++ A G E+V +F
Sbjct: 399 GISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLF 458
Query: 206 REMINQGIRPTKVTFVGVLNACS-----------HGGLVDLGFEIFQSMTRDYGIEPQIE 254
++M G+ TF VL + HG ++ LGF ++
Sbjct: 459 KKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNS-------- 510
Query: 255 HYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
++ + G E A++ + PD + S+++ C ++G G +I ++L
Sbjct: 511 ----LIAAYFKFGGVESAHNLFDELS-EPDVVSWNSMINGCVVNGFSGNGLEIFIQML 563
>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 185/487 (37%), Positives = 281/487 (57%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ IHG +K G+ L+ LYGKCG + A LF+ M
Sbjct: 159 GKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGM----------------- 201
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
V+ V W +M+ V G + + F M+R + ++ T+V
Sbjct: 202 ---------------SVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVS 246
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L AC LG +L +H Y+ +D N + AL+++Y++ G + + +VF M D
Sbjct: 247 LLLACENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPD 306
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++++ AMHGR EA+E F M+ +G+ P VTF +L+ACSH GLV+ G F+
Sbjct: 307 AVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEGKNYFK 366
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M YG+E ++EHY C+VDLL R G +AY I +M + P+ + G+L+ AC++ G +
Sbjct: 367 IMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALIGACRVRGNI 426
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LG+++A+RL +DS Y+ LSN Y+++G+W++A ++RA MKE + + PGCS IE
Sbjct: 427 ELGKEVAERLFSLDPSDSRNYITLSNMYSAAGQWRDASKVRALMKERVLIRNPGCSYIEH 486
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N+IH F++GD HP EQIY K++EL + + G++ TE VLHD+++ KE + HS
Sbjct: 487 GNKIHCFVMGDQSHPDTEQIYNKLEELVRKNREVGFASKTEYVLHDVDEEVKEDLINKHS 546
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GL+ T + + KN+R+C DCH KLI+ I KR II+RD RFHHF NG
Sbjct: 547 EKLAIAFGLLVTNAGMPLIITKNIRICGDCHGFAKLISLIEKRTIIIRDTKRFHHFTNGL 606
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 607 CSCGDYW 613
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 132/246 (53%), Gaps = 3/246 (1%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRP 114
+++ YVE G ++A E+F + KD V W ++I G R ++ L L M+ + ++P
Sbjct: 79 LVSSYVELGCTKDALELFDELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKP 138
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
NEVT++ V+SAC+ +G L++G+ IH K + L V +LIN+Y +CG ++ A +F
Sbjct: 139 NEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLF 198
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
E M + + ++NS++A G + + + F M GI + T V +L AC + G+
Sbjct: 199 EGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRK 258
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSA 294
L E + G++ + ++DL +++G ++ M I PD + ++LS+
Sbjct: 259 LA-EAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGM-INPDAVAWTAMLSS 316
Query: 295 CKIHGK 300
+HG+
Sbjct: 317 YAMHGR 322
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 116/263 (44%), Gaps = 37/263 (14%)
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHRIDLNH-IVGGALINMYSRCGDIDKALQVFEEM 177
+ +++A S ++ R +H + K ++ NH +G L++ Y G AL++F+E+
Sbjct: 41 VSALITAISTCSSISYCRALHCRVIK-SVNYNHGFIGDQLVSSYVELGCTKDALELFDEL 99
Query: 178 KERDVTTYNSLIAGLAMHGR-SIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
++D+ ++NSLI+G + I +FR G++P +VT + V++AC+ G +D+G
Sbjct: 100 PDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVG 159
Query: 237 ---------------FEIFQSMTRDYGIEPQIEHYGCIVDLLS---------------RV 266
++ S+ YG +E C+ + +S +
Sbjct: 160 KCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHM 219
Query: 267 GRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD-CRSADSGTY 322
G E+ + M+ I D + SLL AC+ G +L E + +L+ +
Sbjct: 220 GLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIA 279
Query: 323 VLLSNAYASSGKWKEAVQIRAKM 345
L + YA G ++ ++ M
Sbjct: 280 TALLDLYAKLGTLSDSCKVFGGM 302
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 188/489 (38%), Positives = 286/489 (58%), Gaps = 31/489 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR++H +++ G S + +V++Y CG +A F
Sbjct: 445 EGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASF------------------- 485
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ G +E+ D V W A+I L ++G RAL FR M V PN++T V
Sbjct: 486 -QRGAMEDR---------HDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCV 535
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK-E 179
VL AC+ AL G +H ++ ++ N V AL +MY RCG ++ A ++FE++ E
Sbjct: 536 AVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVE 595
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
RDV +N++IA + +G + EA+++F M +G RP + +FV VL+ACSHGGL D G+EI
Sbjct: 596 RDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEI 655
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F+SM + YGI P +HY C VD+L R G +A + I M + P ++ +LL AC+ +
Sbjct: 656 FRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYR 715
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+ G + + D YV+LSN A +GKW EA ++R +M+ G++K+ G S I
Sbjct: 716 DVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWI 775
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E+ + +HEF+ GD HP+ E+IY++++ L ++ GY P T +VL +++ EKE L
Sbjct: 776 EIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQ 835
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSERLAI G++S+ T+RV+KNLRVC DCH+ K I+ I ++I+VRD +RFHHF +
Sbjct: 836 HSERLAIALGVMSSST-DTVRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVD 894
Query: 480 GTCSCGDYW 488
G+CSCGDYW
Sbjct: 895 GSCSCGDYW 903
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 211/475 (44%), Gaps = 71/475 (14%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR IH +++ LGL L+ LY KC D
Sbjct: 47 QGRRIHARIVSLGLEEELGN--HLLRLYLKCESLGD------------------------ 80
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
VE EVFSR++V+D WT +I +G+ RA+ +F MQ++ VR + VT +
Sbjct: 81 -----VE---EVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFL 132
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL AC++LG L GR IH+++ + ++ ++ L+++Y CG + A+ +FE M ER
Sbjct: 133 AVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ER 191
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D+ ++N+ IA A G A+E+F+ M +G+RP ++T V L+ C+
Sbjct: 192 DLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKIRQA----RAI 247
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
S+ R+ G+E + + +R+G ++A + + + D + ++L A HG
Sbjct: 248 HSIVRESGLEQTLVVSTALASAYARLGHLDQAKE-VFDRAAERDVVSWNAMLGAYAQHGH 306
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE------- 353
+ + R+L + V L NA + I A E G+ ++
Sbjct: 307 MSEAALLFARML--HEGIPPSKVTLVNASTGCSSLRFGRMIHACALEKGLDRDIVLGNAL 364
Query: 354 ----PGCSSIEVNNEIHEFILGD-------IRHPQREQIYKKMQELKQIVKLEGYSPSTE 402
C S E + E I G+ I ++ K+ EL Q ++LEG +P
Sbjct: 365 LDMYTRCGSPEEARHLFEGIPGNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRA 424
Query: 403 VVLHDIE----DWEKEWALA----IHSERLAICYGLISTKPYTTIRVVKNLRVCN 449
L+ +E + E+ A+A +HS ++ Y +++P VVK C
Sbjct: 425 TYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGY---ASEPAIGTAVVKMYASCG 476
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 166/364 (45%), Gaps = 50/364 (13%)
Query: 11 KLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPEC---NDVVASTVMINCYVEHGLVE 67
++ L R R+ LV C + + A + + E +V ST + + Y G ++
Sbjct: 218 RMQLEGVRPARITLVITLSVCAKIRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLD 277
Query: 68 NAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACS 127
A EVF R +D V W AM+ ++G M+ A LF M + + P++VT+V + CS
Sbjct: 278 QAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCS 337
Query: 128 QLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNS 187
+L GR IH+ + +D + ++G AL++MY+RCG ++A +FE + V ++N+
Sbjct: 338 ---SLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPGNAV-SWNT 393
Query: 188 LIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS---------------HGGL 232
+IAG + G+ A+E+F+ M +G+ P + T++ +L A + H +
Sbjct: 394 MIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRI 453
Query: 233 VDLGF----EIFQSMTRDYGIEPQIEH------------------YGCIVDLLSRVGRPE 270
V G+ I ++ + Y I+ + I+ LS+ G +
Sbjct: 454 VSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGK 513
Query: 271 EAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSN 327
A F M +AP+ I ++L AC L G + L R + + V ++
Sbjct: 514 RALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHL---RHSGMESNVFVAT 570
Query: 328 AYAS 331
A AS
Sbjct: 571 ALAS 574
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 9/152 (5%)
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
RP +V +L A L GR IH+ + + L +G L+ +Y +C +
Sbjct: 27 TRPAH--LVRLLRAAGDDRLLSQGRRIHARIVS--LGLEEELGNHLLRLYLKCESLGDVE 82
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
+VF ++ RD ++ ++I HG++ A+ MF M +G+R VTF+ VL AC+ G
Sbjct: 83 EVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLG 142
Query: 232 LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
+ G I + +E +E + +LL
Sbjct: 143 DLSQGRSIHA-----WIVESGLEGKSVLANLL 169
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 182/487 (37%), Positives = 274/487 (56%), Gaps = 31/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H +LKLG L ++Y K G+ A +F +C +V+
Sbjct: 296 GKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVS--------- 346
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
TA+IDG V ++ +AL F +++R + PNE T
Sbjct: 347 ----------------------LTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTS 384
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
++ AC+ LE G +H + K + V L++MY +CG D ++Q+F+E++ D
Sbjct: 385 LIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPD 444
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+N+L+ + HG A+E F MI++G++P VTFV +L CSH G+V+ G F
Sbjct: 445 EIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFS 504
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM + YG+ P+ EHY C++DLL R G+ +EA DFI NM P+ S L ACKIHG +
Sbjct: 505 SMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDM 564
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+ + A +L+ +SG +VLLSN YA +W++ +R +K+ + K PG S +++
Sbjct: 565 ERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYSWVDI 624
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N+ H F + D HPQ+++IY+K+ L +K GY P TE VL D++D KE L HS
Sbjct: 625 RNKTHVFGVEDWSHPQKKEIYEKLDNLLDQIKRIGYVPQTESVLIDMDDNLKEKLLHYHS 684
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ER+A+ + L++ I V KNLRVC+DCHS +K I+ +T+R IIVRD +RFHHF NG+
Sbjct: 685 ERIAVAFSLLTCPTGMPIIVKKNLRVCSDCHSALKFISKVTERNIIVRDISRFHHFSNGS 744
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 745 CSCGDYW 751
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 154/376 (40%), Gaps = 67/376 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+++H +++ G N + LY KCGE ++LFD+M +
Sbjct: 93 KGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQ-------------- 138
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++ V WT++I G N AL F +M+ + + +
Sbjct: 139 ------------------RNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALS 180
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL AC+ LGA++ G +H + K VG L +MYS+CG++ A + FEEM +
Sbjct: 181 SVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCK 240
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------H 229
D + S+I G +G +A+ + +M+ + + L+ACS H
Sbjct: 241 DAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLH 300
Query: 230 GGLVDLGFE----IFQSMTRDYGIEPQIE--------HYGC--------IVDLLSRVGRP 269
++ LGFE I ++T Y + H C I+D + +
Sbjct: 301 ATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQI 360
Query: 270 EEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLL 325
E+A +++ I P+ SL+ AC KL+ G Q+ +++ D L
Sbjct: 361 EKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTL 420
Query: 326 SNAYASSGKWKEAVQI 341
+ Y G + ++Q+
Sbjct: 421 VDMYGKCGLFDHSIQL 436
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 190/487 (39%), Positives = 283/487 (58%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+E+H +LK G + L +Y K G D +L MP
Sbjct: 213 GQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMP---------------- 256
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++ V W +I G +NG L+ + M+ RP+++T V
Sbjct: 257 ----------------IRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVS 300
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLSACS+L L G+ IH+ + K V +LI+MYSR G ++ +++ F + + D
Sbjct: 301 VLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFD 360
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++S+IA HGR EA+E+F +M + + +VTF+ +L ACSH GL + G E F
Sbjct: 361 VVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFD 420
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M + Y ++P+IEHY C+VDLL R GR EEA I +M + PD I+ +LL+ACK+H +
Sbjct: 421 LMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEA 480
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++ E+I++ ++ D+ +YVLLSN +AS+ W QIR M++ V+KEPG S +E+
Sbjct: 481 EMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLEL 540
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N +H+F +GD HPQ +I ++EL +K GY P VLHD+++ EKE+ LA HS
Sbjct: 541 KNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHS 600
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+ AI + L++T IRV+KNLRVC+DCH+ IK I+ I R+IIVRD +RFHHF++G
Sbjct: 601 EKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFKDGE 660
Query: 482 CSCGDYW 488
CSCG+YW
Sbjct: 661 CSCGNYW 667
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 175/333 (52%), Gaps = 4/333 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+++H ++ G ++ L+ Y K G+FK ++ LF MP N V++ ++IN Y+
Sbjct: 81 GKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMPRRN-VMSFNILINGYL 139
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G +E+A ++F + ++ W AMI GL + +AL LF+EM P+E T+
Sbjct: 140 QLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGS 199
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL C+ L +L G+ +H+ + K +L+ +VG +L +MY + G + ++ + M R
Sbjct: 200 VLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRT 259
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +N+LIAG A +G E + + M G RP K+TFV VL+ACS + G +I
Sbjct: 260 VVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHA 319
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+ + G + ++ + SR G E++ + + D ++ S+++A HG+
Sbjct: 320 EVIKA-GASSVLAVVSSLISMYSRSGCLEDSIKAFVDRE-NFDVVLWSSMIAAYGFHGRG 377
Query: 302 QLGEQIAKRLLDCR-SADSGTYVLLSNAYASSG 333
+ ++ ++ D + A+ T++ L A + SG
Sbjct: 378 EEALELFHQMEDLKMEANEVTFLSLLYACSHSG 410
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 130/316 (41%), Gaps = 71/316 (22%)
Query: 91 LVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLN 150
L +G + +A D F + + +L +C +LG+L G+ +HS + +
Sbjct: 41 LCNDGRIKQAYDTFT----SEIWSDPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKD 96
Query: 151 HIVGGALINMYSR-------------------------------CGDIDKALQVFEEMKE 179
+ L+N YS+ GD++ A ++F+EM E
Sbjct: 97 KFISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSE 156
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS----------- 228
R++ T+N++IAGL + +A+ +F+EM G P + T VL C+
Sbjct: 157 RNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEV 216
Query: 229 HGGLVDLGFEIF--------------------QSMTRDYGIEPQIEHYGCIVDLLSRVGR 268
H L+ GFE+ + + + I + + ++ ++ G
Sbjct: 217 HACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVA-WNTLIAGKAQNGC 275
Query: 269 PEEAYDFITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV-L 324
PEE + MK+A PD I S+LSAC L G+QI ++ ++ V
Sbjct: 276 PEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSS 335
Query: 325 LSNAYASSGKWKEAVQ 340
L + Y+ SG +++++
Sbjct: 336 LISMYSRSGCLEDSIK 351
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 42/215 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G++IH +V+K G S + L+ +Y + G +D+++ F + E DVV + MI Y
Sbjct: 313 QGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDR-ENFDVVLWSSMIAAY 371
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG GE AL+LF +M+ + NEVT +
Sbjct: 372 GFHG-----------------------------RGE--EALELFHQMEDLKMEANEVTFL 400
Query: 121 CVLSACSQLGALELGR-----WIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
+L ACS G E G + Y K RI+ H ++++ R G +++A +
Sbjct: 401 SLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIE--HYT--CVVDLLGRAGRLEEAEGMIR 456
Query: 176 EMK-ERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
M + D + +L+A +H + A + E+I
Sbjct: 457 SMPVQPDGIIWKTLLAACKLHKEAEMAERISEEII 491
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 188/490 (38%), Positives = 289/490 (58%), Gaps = 17/490 (3%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H LK G L+ +Y KC + A +F M E D+V+ T MI Y
Sbjct: 410 GRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNE-KDIVSWTSMITAYS 468
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPNEVTIV 120
+ G V A E F + K+ + W AM+ +++G L +++ M + VRP+ VT V
Sbjct: 469 QVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYV 528
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+ C+ LGA +LG I K + ++ V A+I MYS+CG I +A +VF+ + +
Sbjct: 529 TLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVK 588
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D+ ++N++I G + HG +A+E+F +++ +G +P +++V VL+ CSH GLV G F
Sbjct: 589 DIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYF 648
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
M R + I P +EH+ C+VDLL R G EA D I +M + P + G+LLSACKIHG
Sbjct: 649 DMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGN 708
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+L E AK + + S DSG+Y+L++ YA +GK ++ QIR M++ G++K PG S +E
Sbjct: 709 NELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWME 768
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGY--SPSTEVVLHDIEDWEKEWALA 418
V+N++H F D+ HPQ I KK+ EL + + GY + ST +H
Sbjct: 769 VDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYVRTDSTRSEIH------------ 816
Query: 419 IHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFE 478
HSE+LA+ +GL++ + I ++KNLR+C DCH++IKLI+ +T R+ ++RD RFHHF
Sbjct: 817 -HSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRFHHFN 875
Query: 479 NGTCSCGDYW 488
G+CSCGDYW
Sbjct: 876 GGSCSCGDYW 885
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 141/301 (46%), Gaps = 37/301 (12%)
Query: 6 HGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGL 65
HG+++ +GL S + L+ Y CG DA +L +V+ VM+N Y + G
Sbjct: 47 HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGR 106
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTIVCVLS 124
+ +A E+F R+ +D W ++ G ++ + +L+ F M R + PN T+ C +
Sbjct: 107 LSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMK 166
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG------------------- 165
+C LG L + + + K + V AL++M+ RCG
Sbjct: 167 SCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFC 226
Query: 166 ------------DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGI 213
+D AL++F+ M ERDV ++N +++ L+ GR EA++M +M ++G+
Sbjct: 227 RNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGV 286
Query: 214 RPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHY--GCIVDLLSRVGRPEE 271
R T+ L AC+ + G ++ + R+ P I+ Y +V+L ++ G +E
Sbjct: 287 RLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNL---PHIDPYVASALVELYAKSGCFKE 343
Query: 272 A 272
A
Sbjct: 344 A 344
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 114/224 (50%), Gaps = 1/224 (0%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
++ V K + + LV+++ +CG A +LF + E + M+ YV+
Sbjct: 179 QLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPT-MFCRNSMLAGYVKT 237
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
V++A E+F + +D V W M+ L ++G + ALD+ +MQ VR + T L
Sbjct: 238 YGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSL 297
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
+AC++L +L G+ +H+ + ++ ++ V AL+ +Y++ G +A VF + +R+
Sbjct: 298 TACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNV 357
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+ LI+G +G E+VE+F +M + + + +++ C
Sbjct: 358 AWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGC 401
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 109/242 (45%), Gaps = 25/242 (10%)
Query: 150 NHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
N I ++N Y++ G + A+++F M RDV ++N+L++G + + ++E F M
Sbjct: 90 NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 149
Query: 210 NQGIR-PTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGR 268
G P T + +C G L ++ +M + + + E +VD+ R G
Sbjct: 150 RSGDSWPNAFTLACAMKSCGALGWHSLALQLL-AMVQKFDSQDDSEVAAALVDMFVRCGA 208
Query: 269 PEEAYDFITNMKIAPDHIMLGSLLSA-CKIHG---KLQLGEQIAKRLLDCRSADSGTYVL 324
+ A +K P S+L+ K +G L+L + + +R D ++ +
Sbjct: 209 VDLASRLFVRIK-EPTMFCRNSMLAGYVKTYGVDHALELFDSMPER-------DVVSWNM 260
Query: 325 LSNAYASSGKWKEAVQIRAKMKEAGVQKEP--------GC---SSIEVNNEIHEFILGDI 373
+ +A + SG+ +EA+ + M+ GV+ + C SS+ ++H ++ ++
Sbjct: 261 MVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNL 320
Query: 374 RH 375
H
Sbjct: 321 PH 322
>gi|302820671|ref|XP_002992002.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
gi|300140244|gb|EFJ06970.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
Length = 620
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 193/492 (39%), Positives = 297/492 (60%), Gaps = 9/492 (1%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPEC----NDVVASTVMINCY 60
HG L+ GLRSN T L L+E G + K A Q+ N ++N Y
Sbjct: 130 FHGMELE-GLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMY 188
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLV--RNGEMARALDLFREMQRDNVRPNEVT 118
G + + + F ++ K V W+ M+ ++G RA F+EM+ + ++P EVT
Sbjct: 189 ARCGSLLDTKKAFDSLEEKGLVAWSIMLAAYAQSKDGSGRRAFKFFQEMEAEGIKPGEVT 248
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHR-IDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
V L AC+ + LE GR +H ++ + ++G +INMY +CG A VF++M
Sbjct: 249 FVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQM 308
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
E+ + ++NSLI A +G ++EA+ +EM+ QG P T V +L SH GL++ G
Sbjct: 309 PEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGV 368
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFI-TNMKIAPDHIMLGSLLSACK 296
E F+S +D+G+EP C+VDLL+R G + A + I + D I +LL+ACK
Sbjct: 369 EHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLAACK 428
Query: 297 IHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGC 356
+G Q G + A+R+ + SG++V+L+N YAS G+W +A +IR M+ V+KEPGC
Sbjct: 429 SYGDPQRGIRCAERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKMMERMSVKKEPGC 488
Query: 357 SSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWA 416
S IE++ +HEFI G+ +HP+ +I +++++L ++ GY P T V+HD+E+ +KE
Sbjct: 489 SWIELSGSVHEFISGESKHPKIREICEELEKLTLRMREAGYVPDTTNVVHDVEEGDKEEI 548
Query: 417 LAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHH 476
L+ HSERLAI +GL+ST+P TIRVVKNLRVC+DCH+ K+I+++ R+I+VRD +RFHH
Sbjct: 549 LSRHSERLAIVFGLMSTRPGETIRVVKNLRVCSDCHAATKIISSVVGREIVVRDSSRFHH 608
Query: 477 FENGTCSCGDYW 488
F++G CSCGD+W
Sbjct: 609 FKHGQCSCGDFW 620
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 183/361 (50%), Gaps = 11/361 (3%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+IH V+ GL SN LV +YGKC + A ++FD M DVV+ T M+ Y
Sbjct: 29 GRQIHSSVVDSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML-LRDVVSWTAMLAVYA 87
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++G A VF + KD V W A+I+ V N + AL+LF M+ + +R NE T++
Sbjct: 88 QNGCWSQALHVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLS 147
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHI-VGGALINMYSRCGDIDKALQVFEEMKER 180
+L AC L L+L R IH+ N VG +++NMY+RCG + + F+ ++E+
Sbjct: 148 LLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDTKKAFDSLEEK 207
Query: 181 DVTTYNSLIAGLAMH--GRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
+ ++ ++A A G A + F+EM +GI+P +VTFV L+AC+ ++ G
Sbjct: 208 GLVAWSIMLAAYAQSKDGSGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRS 267
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLG--SLLSACK 296
+ + +E + I+++ + G P +A M P+ ++ SL+ A
Sbjct: 268 MHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQM---PEKCLISWNSLIVAYA 324
Query: 297 IHG-KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQ-IRAKMKEAGVQKEP 354
+G L+ + + LL DSGT V + + +G + V+ R+ +++ G++
Sbjct: 325 HNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSS 384
Query: 355 G 355
G
Sbjct: 385 G 385
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 4/137 (2%)
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
MQ + RP++V V L AC+ G L+ GR IHS + + N I+ +L+NMY +C D
Sbjct: 1 MQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSVVDSGLTSNIIISNSLVNMYGKCQD 60
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
+ A +VF+ M RDV ++ +++A A +G +A+ +F M R V++ V+NA
Sbjct: 61 VPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALHVFEAM----PRKDDVSWNAVINA 116
Query: 227 CSHGGLVDLGFEIFQSM 243
E+F M
Sbjct: 117 SVGNSKFQDALELFHGM 133
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 176/440 (40%), Positives = 280/440 (63%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
+V +T +++ Y + GL+++A VF + + V W++M G V+N +AL LFR+
Sbjct: 199 NVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAW 258
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
++ ++ + V+ AC+ L A+ G+ +++ + K N V +LI+MY++CG I+
Sbjct: 259 ETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIE 318
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
++ +VF ++++R+V +N++I+GL+ H RS+E + +F +M G+ P VTFV VL+AC
Sbjct: 319 ESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACG 378
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLV G + F MT+++ + P + HY C+VD LSR G+ EAYD I+ + M
Sbjct: 379 HMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMW 438
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
GSLL++C+ HG L+L E AK+L D +SG Y+LLSN YA++GKW E ++R +KE+
Sbjct: 439 GSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKES 498
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
V+KE G S IE+ +++H F++G+ HP+ +IY K+ E+ ++ GY T+ LH +
Sbjct: 499 DVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHDLHQV 558
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
+ K+ L HSE+LA GL+ P IR++KNLR+C DCHS +KL + R +IV
Sbjct: 559 GESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLASKFFCRDVIV 618
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD NRFHHF+NG CSCGD+W
Sbjct: 619 RDTNRFHHFKNGCCSCGDFW 638
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 133/273 (48%), Gaps = 33/273 (12%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ H Q+L +GL+++ T L+ +Y KCG A Q+FDEMP
Sbjct: 82 QGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPS-------------- 127
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ V W MI L +NGE ALDL +MQR+ +E TI
Sbjct: 128 ------------------RSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTIS 169
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL AC+ AL + +H++ K +DLN V AL+++Y++CG + A+ VFE M +R
Sbjct: 170 SVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDR 229
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
V T++S+ AG + +A+ +FR+ G++ + V+ AC+ + G ++
Sbjct: 230 SVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQM- 288
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAY 273
++ G I ++D+ ++ G EE+Y
Sbjct: 289 NALLSKSGFCSNIFVASSLIDMYAKCGGIEESY 321
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 81/152 (53%), Gaps = 2/152 (1%)
Query: 47 CNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFRE 106
C+++ ++ +I+ Y + G +E +++VF V+ ++ V W AMI GL R+ + LF +
Sbjct: 298 CSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEK 357
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGK-HRIDLNHIVGGALINMYSRCG 165
MQ+ + PN+VT V VLSAC +G + G+ M K H + N +++ SR G
Sbjct: 358 MQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAG 417
Query: 166 DIDKALQVFEEMK-ERDVTTYNSLIAGLAMHG 196
I +A + ++ + + SL+A HG
Sbjct: 418 QIFEAYDLISKLPFNASASMWGSLLASCRTHG 449
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 60/107 (56%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L C++ L G+ H+ + + + + LINMYS+CG +D A QVF+EM R
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+ ++N++I L +G EA+++ +M +G ++ T VL AC+
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACA 176
>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 185/459 (40%), Positives = 283/459 (61%), Gaps = 16/459 (3%)
Query: 45 PECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLF 104
P + S ++ Y + + +A ++F +K +D+ W AM+DG RN + L +F
Sbjct: 464 PGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIF 523
Query: 105 REMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGK--------HRIDLNHIVGGA 156
++ + + V++ +L++C +L +L+LG+ H+ + K H+ L I A
Sbjct: 524 LDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSI-NNA 582
Query: 157 LINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPT 216
LI+MYS+CG I A QVF +M+ +DV ++ ++I G A HG ++EA+++F M GI+P
Sbjct: 583 LISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPN 642
Query: 217 KVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDF- 275
+VTF+ +L AC+HGGLV G F SM DYG+ P IEHY C++DL R G+ + A
Sbjct: 643 QVTFLALLMACAHGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLV 702
Query: 276 ---ITNMKIAPDHIM--LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYA 330
IT K D I+ LL AC +L LG + A ++L+ D TY+LL+N YA
Sbjct: 703 EFGITLFKPYHDDILNLWKVLLGACHASKQLDLGVEAATKILELEPEDEATYILLANLYA 762
Query: 331 SSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQ 390
SSG W++A+++R M++ G++KE GCS I+ N H F+ GD+ HPQR++IY+K+ +L
Sbjct: 763 SSGLWEDAIKVRKAMRDKGLRKEVGCSWIDTGNRRHVFVAGDVYHPQRKEIYEKLAQLNY 822
Query: 391 IVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLISTKPYT-TIRVVKNLRVCN 449
+ GY P TE+VLHD+++ EKE L HSE+LA+ +GL++ IRV+KNLRVC
Sbjct: 823 SCRRMGYVPMTELVLHDVDETEKEAILGCHSEKLAVSFGLLNCGVGNGVIRVMKNLRVCE 882
Query: 450 DCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
DCHS +K + + KR+I++RD RFH F +G+CSCGDYW
Sbjct: 883 DCHSWMKFASLLEKREILLRDSQRFHLFRDGSCSCGDYW 921
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 172/400 (43%), Gaps = 86/400 (21%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +HG+++K GL + LV YGKCG + A QLF+
Sbjct: 244 GAMVHGRIIKAGLEATNLWN-SLVTFYGKCGNLQHASQLFE------------------- 283
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR--DNVRPNEVTI 119
R+ KD V W AMI + GE AL LFR M + V+PN VT
Sbjct: 284 -------------RISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTF 330
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+ +LSA S L AL GR IH+++ + ++++ + +LI YS+C ++ KA ++FE +
Sbjct: 331 LSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLL 390
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH--GGLVDL-- 235
RD+ ++NS++AG + + ++F+ M+ GI P + + NA S GL+
Sbjct: 391 RDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRR 450
Query: 236 GFEIFQSMTRDYGIEP---QIEHYGCIVDLLSRVGRPEEAYDFITNMK------------ 280
G EI + R I P + I+ + ++ R +A MK
Sbjct: 451 GKEIHGYILRR--ITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMD 508
Query: 281 ----------------------IAPDHIMLGSLLSACKIHGKLQLGEQ---IAKRLL--- 312
DH+ L LL++C LQLG+Q + +L
Sbjct: 509 GYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQ 568
Query: 313 DCRSADSGTYV--LLSNAYASSGKWKEAVQIRAKMKEAGV 350
DC DS + L + Y+ G K+A Q+ KM+ V
Sbjct: 569 DCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKDV 608
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 133/283 (46%), Gaps = 37/283 (13%)
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
EH ++ A ++F +D + W+A+I R G A+A LF++M + ++PN ++
Sbjct: 67 EHERLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLAS 126
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEE--MKE 179
+L G + L R +H + + L+ + A I MYSRCG ++ A +VF+E +
Sbjct: 127 LLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLA 186
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACS---------- 228
D+ +NS+IA HG +E + +F +M++ G + PT++T+ V+NAC
Sbjct: 187 LDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAM 246
Query: 229 -HGGLVDLGFE---IFQSMTRDYGIEPQIEHYGCIVDLLSRV---------------GRP 269
HG ++ G E ++ S+ YG ++H + + +SR G
Sbjct: 247 VHGRIIKAGLEATNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEG 306
Query: 270 EEAYDFITNM-----KIAPDHIMLGSLLSACKIHGKLQLGEQI 307
E A M + P+ + SLLSA L+ G +I
Sbjct: 307 ENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREI 349
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 151/351 (43%), Gaps = 48/351 (13%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GREIH + +L L + S L+ Y KC E
Sbjct: 346 GREIHAHIFRLSLEVDTSITNSLITFYSKCRE---------------------------- 377
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
V A E+F R+ ++D + W +M+ G +N + R D+F+ M + P+ ++
Sbjct: 378 ----VGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTI 433
Query: 122 VLSACSQ----LGALELGRWIHSYMGKHRIDLNHI---VGGALINMYSRCGDIDKALQVF 174
+ +A S+ L G+ IH Y+ + RI + V A++ MY++ I A ++F
Sbjct: 434 IFNAASRDSSGLIYFRRGKEIHGYILR-RITPGGVSLSVSNAILKMYAKFNRIADAEKIF 492
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
+ MK RD ++N+++ G + + + + + +F +++ QG V+ +L +C +
Sbjct: 493 KGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQ 552
Query: 235 LGFEIFQSMTRDYGIE--PQIEHY----GCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
LG + + + + + P + ++ + S+ G ++A M+ D
Sbjct: 553 LGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKME-RKDVFSW 611
Query: 289 GSLLSACKIHGKLQLGEQIAKRL-LDCRSADSGTYVLLSNAYASSGKWKEA 338
++++ C HG Q+ +R+ D + T++ L A A G +E
Sbjct: 612 TAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGGLVQEG 662
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 188/490 (38%), Positives = 289/490 (58%), Gaps = 17/490 (3%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++H LK G L+ +Y KC + A +F M E D+V+ T MI Y
Sbjct: 390 GRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNE-KDIVSWTSMITAYS 448
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPNEVTIV 120
+ G V A E F + K+ + W AM+ +++G L +++ M + VRP+ VT V
Sbjct: 449 QVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYV 508
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+ C+ LGA +LG I K + ++ V A+I MYS+CG I +A +VF+ + +
Sbjct: 509 TLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVK 568
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D+ ++N++I G + HG +A+E+F +++ +G +P +++V VL+ CSH GLV G F
Sbjct: 569 DIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYF 628
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
M R + I P +EH+ C+VDLL R G EA D I +M + P + G+LLSACKIHG
Sbjct: 629 DMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGN 688
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
+L E AK + + S DSG+Y+L++ YA +GK ++ QIR M++ G++K PG S +E
Sbjct: 689 NELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWME 748
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGY--SPSTEVVLHDIEDWEKEWALA 418
V+N++H F D+ HPQ I KK+ EL + + GY + ST +H
Sbjct: 749 VDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYVRTDSTRSEIH------------ 796
Query: 419 IHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFE 478
HSE+LA+ +GL++ + I ++KNLR+C DCH++IKLI+ +T R+ ++RD RFHHF
Sbjct: 797 -HSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRFHHFN 855
Query: 479 NGTCSCGDYW 488
G+CSCGDYW
Sbjct: 856 GGSCSCGDYW 865
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 141/301 (46%), Gaps = 37/301 (12%)
Query: 6 HGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGL 65
HG+++ +GL S + L+ Y CG DA +L +V+ VM+N Y + G
Sbjct: 27 HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGR 86
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTIVCVLS 124
+ +A E+F R+ +D W ++ G ++ + +L+ F M R + PN T+ C +
Sbjct: 87 LSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMK 146
Query: 125 ACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG------------------- 165
+C LG L + + + K + V AL++M+ RCG
Sbjct: 147 SCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFC 206
Query: 166 ------------DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGI 213
+D AL++F+ M ERDV ++N +++ L+ GR EA++M +M ++G+
Sbjct: 207 RNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGV 266
Query: 214 RPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHY--GCIVDLLSRVGRPEE 271
R T+ L AC+ + G ++ + R+ P I+ Y +V+L ++ G +E
Sbjct: 267 RLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNL---PHIDPYVASALVELYAKSGCFKE 323
Query: 272 A 272
A
Sbjct: 324 A 324
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 114/224 (50%), Gaps = 1/224 (0%)
Query: 4 EIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
++ V K + + LV+++ +CG A +LF + E + M+ YV+
Sbjct: 159 QLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPT-MFCRNSMLAGYVKT 217
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVL 123
V++A E+F + +D V W M+ L ++G + ALD+ +MQ VR + T L
Sbjct: 218 YGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSL 277
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVT 183
+AC++L +L G+ +H+ + ++ ++ V AL+ +Y++ G +A VF + +R+
Sbjct: 278 TACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNV 337
Query: 184 TYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+ LI+G +G E+VE+F +M + + + +++ C
Sbjct: 338 AWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGC 381
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 109/242 (45%), Gaps = 25/242 (10%)
Query: 150 NHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
N I ++N Y++ G + A+++F M RDV ++N+L++G + + ++E F M
Sbjct: 70 NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 129
Query: 210 NQGIR-PTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGR 268
G P T + +C G L ++ +M + + + E +VD+ R G
Sbjct: 130 RSGDSWPNAFTLACAMKSCGALGWHSLALQLL-AMVQKFDSQDDSEVAAALVDMFVRCGA 188
Query: 269 PEEAYDFITNMKIAPDHIMLGSLLSA-CKIHG---KLQLGEQIAKRLLDCRSADSGTYVL 324
+ A +K P S+L+ K +G L+L + + +R D ++ +
Sbjct: 189 VDLASRLFVRIK-EPTMFCRNSMLAGYVKTYGVDHALELFDSMPER-------DVVSWNM 240
Query: 325 LSNAYASSGKWKEAVQIRAKMKEAGVQKEP--------GC---SSIEVNNEIHEFILGDI 373
+ +A + SG+ +EA+ + M+ GV+ + C SS+ ++H ++ ++
Sbjct: 241 MVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNL 300
Query: 374 RH 375
H
Sbjct: 301 PH 302
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 186/488 (38%), Positives = 291/488 (59%), Gaps = 33/488 (6%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR++H V+K G+ SN L+ +Y KCG
Sbjct: 415 KGRDVHSYVIKNGMGSNLPVTNALINMYAKCGS--------------------------- 447
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
VE A VFS++ VKD V W MI G +N AL+LF +MQ+ +P+++T+
Sbjct: 448 -----VEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ-FKPDDITMA 501
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
CVL AC+ L AL+ GR IH ++ + + V AL++MY++CG + A +F+ + ++
Sbjct: 502 CVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKK 561
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D+ ++ +IAG MHG EA+ F EM GI P + +F +LNACSH GL++ G++ F
Sbjct: 562 DLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFF 621
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
SM + G+EP++EHY C+VDLL+R+G +AY FI +M I PD + G LLS C+IH
Sbjct: 622 NSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHD 681
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIE 360
++L E++A+ + + ++ YV+L+N YA + KW+E ++R +M++ G ++ PGCS IE
Sbjct: 682 VKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIE 741
Query: 361 VNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
V + + F+ G+ +HPQ ++I + +L ++ E YS VL + +D EKE H
Sbjct: 742 VGGKFNIFVAGNSKHPQAKKIDVLLSKLTMQMQNEDYSSMFRYVLINEDDMEKEMIQCGH 801
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE+ A+ +G+++ P T+RV KN RVC DCH M K ++ TK +I++RD NRFHHF++G
Sbjct: 802 SEKSAMAFGILNLPPGRTVRVSKNRRVCGDCHEMGKFMSKTTKMEIVLRDSNRFHHFKDG 861
Query: 481 TCSCGDYW 488
CSC D +
Sbjct: 862 LCSCRDAF 869
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 182/362 (50%), Gaps = 18/362 (4%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFK--DAMQLFDEMPEC--NDVVASTVMI 57
G EI Q+L LG+ + +T + ++ G A+ F + C +VV S ++
Sbjct: 280 GLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFG-VKACFSEEVVFSNTLL 338
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y + G + A EVF ++ V WT++I VR G + A+ LF EMQ VRP+
Sbjct: 339 DMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIY 398
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T+ ++ AC+ +L+ GR +HSY+ K+ + N V ALINMY++CG +++A VF ++
Sbjct: 399 TVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKI 458
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
+D+ ++N++I G + + EA+E+F +M Q +P +T VL AC+ +D G
Sbjct: 459 PVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAALDKGR 517
Query: 238 EIFQSMTRDYGIEPQIEHYGC-IVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
EI + R G + H C +VD+ ++ G A + +M D I +++
Sbjct: 518 EIHGHILRR-GYFSDL-HVACALVDMYAKCGLLVLA-QLLFDMIPKKDLISWTVMIAGYG 574
Query: 297 IHGKLQLGEQIAKRLLDCRSA----DSGTYVLLSNAYASSGKWKEAVQIRAKMK-EAGVQ 351
+HG G + + R A D ++ + NA + SG E + M+ E GV+
Sbjct: 575 MHG---FGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVE 631
Query: 352 KE 353
+
Sbjct: 632 PK 633
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 152/345 (44%), Gaps = 66/345 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
E + +HG VLKLG SN + VV S +I Y
Sbjct: 213 ECKRVHGYVLKLGFGSNTA------------------------------VVNS--LIAAY 240
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ G VE+A +F + D V W +MI+G V NG L++F +M V + T+V
Sbjct: 241 FKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLV 300
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL AC+ +G L LGR +H + K + L++MYS+CG+++ A +VF +M +
Sbjct: 301 SVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDT 360
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
+ ++ S+IA G +A+ +F EM ++G+RP T +++AC+ +D G ++
Sbjct: 361 TIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVH 420
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGR-------------------------------P 269
+ ++ G+ + ++++ ++ G P
Sbjct: 421 SYVIKN-GMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLP 479
Query: 270 EEAYDFITNM--KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
EA + +M + PD I + +L AC L G +I +L
Sbjct: 480 NEALELFLDMQKQFKPDDITMACVLPACAGLAALDKGREIHGHIL 524
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 127/283 (44%), Gaps = 41/283 (14%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+ +H ++ G+ + + KLV +Y CG+ ++FD++ ND V
Sbjct: 112 DGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKI--MNDKV--------- 160
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
W ++ + G ++ LF++MQ+ V N T
Sbjct: 161 ---------------------FLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFT 199
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
CVL + LG ++ + +H Y+ K N V +LI Y + G ++ A +F+E+ E
Sbjct: 200 CVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEP 259
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV ++NS+I G ++G S +E+F +M+ G+ T V VL AC++ G + LG +
Sbjct: 260 DVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRAL- 318
Query: 241 QSMTRDYGIEP----QIEHYGCIVDLLSRVGRPEEAYDFITNM 279
+G++ ++ ++D+ S+ G A + M
Sbjct: 319 ----HGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKM 357
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 130/302 (43%), Gaps = 40/302 (13%)
Query: 85 TAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGK 144
A I+ G++ A++L + + + N + VL C++ +LE G+ +HS +
Sbjct: 65 NAKINKFCEMGDLRNAIELLTKSKSYELGLN--SYCSVLQLCAEKKSLEDGKRVHSVIIS 122
Query: 145 HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEM 204
+ I ++ +G L+ MY CGD+ + ++F+++ V +N L++ A G E+V +
Sbjct: 123 NGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSL 182
Query: 205 FREMINQGIRPTKVTFVGVLNACS-----------HGGLVDLGF----EIFQSMTRDY-- 247
F++M G+ TF VL + HG ++ LGF + S+ Y
Sbjct: 183 FKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFK 242
Query: 248 --GI-----------EPQIEHY-----GCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLG 289
G+ EP + + GC+V+ S G E + + + + D L
Sbjct: 243 FGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFS--GNGLEIFIQMLILGVEVDLTTLV 300
Query: 290 SLLSACKIHGKLQLGEQI-AKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
S+L AC G L LG + + C S + L + Y+ G A ++ KM +
Sbjct: 301 SVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDT 360
Query: 349 GV 350
+
Sbjct: 361 TI 362
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 185/429 (43%), Positives = 274/429 (63%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D+ A +++ Y + GL++ A +F + VKDTV ++A++ G V+NG A +F++MQ
Sbjct: 259 DLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQ 318
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
NV P+ T+V ++ ACS L AL+ GR H + + + ALI+MY++CG ID
Sbjct: 319 ACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRID 378
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+ QVF M RD+ ++N++IAG +HG EA +F EM N G P VTF+ +L+ACS
Sbjct: 379 LSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACS 438
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GLV G F M YG+ P++EHY C+VDLLSR G +EAY+FI +M + D +
Sbjct: 439 HSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVW 498
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+LL AC+++ + LG+++++ + + +G +VLLSN Y+++G++ EA ++R K
Sbjct: 499 VALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQ 558
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
G +K PGCS IE+N +H F+ GD HPQ +IY+++ + +K GY P T VL D+
Sbjct: 559 GFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDL 618
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
E+ EKE AL HSE+LAI YG++S TI V KNLRVC DCH++IK I+ + +R IIV
Sbjct: 619 EEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIV 678
Query: 469 RDRNRFHHF 477
RD NRFHHF
Sbjct: 679 RDANRFHHF 687
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 163/338 (48%), Gaps = 32/338 (9%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G +H ++ L NR+++ KL + V+ T +++ Y
Sbjct: 131 QGTSVHAYCIRACLHPNRNSKSKLTD----------------------GVLLGTALLDMY 168
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV-RPNEVTI 119
+ G + A VF + ++ V W+A+I G V M +A LF+ M + + +I
Sbjct: 169 AKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSI 228
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
L AC+ L L +G +H+ + K + + G +L++MY++ G ID+A+ +F+EM
Sbjct: 229 ASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV 288
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+D +Y++L++G +GR+ EA +F++M + P T V ++ ACSH + G
Sbjct: 289 KDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCS 348
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
S+ G+ + ++D+ ++ GR + + + NM + D + ++++ IHG
Sbjct: 349 HGSVIIR-GLASETSICNALIDMYAKCGRIDLSRQ-VFNMMPSRDIVSWNTMIAGYGIHG 406
Query: 300 KLQLGEQIAKRLLDCRS----ADSGTYVLLSNAYASSG 333
LG++ L+ + D T++ L +A + SG
Sbjct: 407 ---LGKEATALFLEMNNLGFPPDGVTFICLLSACSHSG 441
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 144/296 (48%), Gaps = 20/296 (6%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALD--LFRE 106
D+ ST +++ YV+ + +A +F+ + +D V W AM+ G +G A+ L +
Sbjct: 44 DLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQ 103
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM----------GKHRIDLNHIVGGA 156
MQ +RPN T+V +L +Q GAL G +H+Y K ++ ++G A
Sbjct: 104 MQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTA 163
Query: 157 LINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG---I 213
L++MY++CG + A +VF+ M R+ T+++LI G + R +A +F+ M+ QG +
Sbjct: 164 LLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFL 223
Query: 214 RPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAY 273
PT + L AC+ + +G E ++ G+ + ++ + ++ G ++A
Sbjct: 224 SPTSIA--SALRACASLDHLRMG-EQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAI 280
Query: 274 DFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNA 328
M + D + +L+S +G+ + + K++ C D+ T V L A
Sbjct: 281 ALFDEMAV-KDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPA 335
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 2/135 (1%)
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M R V PN T L ACS L GR IH + + + V AL++MY +C
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ--GIRPTKVTFVGVL 224
+ A +F M RD+ +N+++AG A HG AV M Q +RP T V +L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 225 NACSHGGLVDLGFEI 239
+ G + G +
Sbjct: 121 PLLAQQGALAQGTSV 135
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 180/441 (40%), Positives = 266/441 (60%), Gaps = 1/441 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D++ +I+ Y E G V A +F + KD V WT+M++ NG + A+ LF +M
Sbjct: 499 DLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKML 558
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
++P+ V +V +L A + L +L G+ IH ++ + + + V +L++MYS CG ++
Sbjct: 559 NAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMN 618
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
AL+VF+E K +DV + ++I MHG +A+ +F+ M+ G+ P V+F+ +L ACS
Sbjct: 619 YALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACS 678
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H LVD G M Y ++P EHY C+VDLL R G+ EEAY FI +M + P ++
Sbjct: 679 HSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVW 738
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
+LL AC+IH +L +LL+ + G YVL+SN +A GKW +IR KM E
Sbjct: 739 CALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGKWNNVKEIRTKMTEQ 798
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEG-YSPSTEVVLHD 407
G++K+P CS IE+ N +H F D H + I+ K+ E+ + ++ EG Y T VLHD
Sbjct: 799 GLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKLRREGQYVEDTSFVLHD 858
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
+ + EK L HSERLAI +GLIST T +R+ KNLRVC DCH KL++ + +R+I+
Sbjct: 859 VSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLRVCGDCHEFTKLVSKLFEREIV 918
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
VRD NRFHHF GTCSCGD+W
Sbjct: 919 VRDANRFHHFSGGTCSCGDFW 939
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 184/445 (41%), Gaps = 109/445 (24%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G E+HG +K GL + LV +Y KCG
Sbjct: 182 GSEVHGLAVKSGLDRSTLVANALVGMYAKCG----------------------------- 212
Query: 62 EHGLVENAFEVFSRVK-VKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
L+++A VF ++ +D W + I G V+NG ALDLFR MQ D N T V
Sbjct: 213 ---LLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTV 269
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL C++L L GR +H+ + K + N I AL+ MY+RCG +D AL+VF E+ ++
Sbjct: 270 GVLQVCAELAQLNHGRELHAALLKCGTEFN-IQCNALLVMYARCGWVDSALRVFREIGDK 328
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++NS+++ + EA++ F EM+ G P V +L+A H G + G E+
Sbjct: 329 DYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVH 388
Query: 241 -----QSMTRD--------------YGIEPQIE-----------HYGCIVDLLSRVGRPE 270
Q + D Y +E + I+ ++ R
Sbjct: 389 AYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYS 448
Query: 271 EAY-DFITNMK--IAPDHIMLGSLLSACKIHGKLQLGEQI--------------AKRLLD 313
EA F T K I D +M+GS+L AC + L +Q+ R++D
Sbjct: 449 EAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLLDLILKNRIID 508
Query: 314 --------CRS---------ADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE--- 353
C + D T+ + N +A +G EAV + KM AG+Q +
Sbjct: 509 IYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVA 568
Query: 354 --------PGCSSIEVNNEIHEFIL 370
G SS+ EIH F++
Sbjct: 569 LVGILGAIAGLSSLTKGKEIHGFLI 593
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 185/455 (40%), Gaps = 119/455 (26%)
Query: 1 EGREIHGQVLKLGLRSNRSTRL---KLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMI 57
EGR++H + G + KL+ +YGKCG DA +LFD MP
Sbjct: 73 EGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMP------------ 120
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD----NVR 113
A VFS W A+I + +G A+ ++R M+
Sbjct: 121 -----------ARTVFS---------WNALIGACLSSGGAGEAVGVYRAMRASEPVAGAA 160
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
P+ T+ VL AC G G +H K +D + +V AL+ MY++CG +D AL+V
Sbjct: 161 PDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRV 220
Query: 174 FEEMKE-RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
FE M++ RDV ++NS I+G +G +EA+++FR M + G T VGVL C+
Sbjct: 221 FEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQ 280
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCI--------VDLLSRVGRP--------------- 269
++ G E+ ++ + G E I+ + VD RV R
Sbjct: 281 LNHGRELHAALLK-CGTEFNIQCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSC 339
Query: 270 -------EEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGE-------------- 305
EA DF M PDH + SLLSA G+L G
Sbjct: 340 YVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSD 399
Query: 306 -QIAKRLLD-----------------CRSADSGTYVLLSNAYASSGKWKEAV-QIRAKMK 346
QIA L+D R D ++ + YA S ++ EA+ + R K
Sbjct: 400 LQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQK 459
Query: 347 EAGVQKEP-----------GCSSIEVNNEIHEFIL 370
E G++ +P G SI + ++H + +
Sbjct: 460 E-GIKVDPMMMGSILEACSGLKSISLLKQVHSYAI 493
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 164/317 (51%), Gaps = 8/317 (2%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPEC---NDVVASTVMI 57
E + G++++ G + + + L+ G G + ++ + +D+ + ++
Sbjct: 348 EAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLM 407
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y++ VE + VF R+++KD V WT +I ++ + A+ FR Q++ ++ + +
Sbjct: 408 DMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPM 467
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+ +L ACS L ++ L + +HSY ++ + L+ I+ +I++Y CG++ AL +FE +
Sbjct: 468 MMGSILEACSGLKSISLLKQVHSYAIRNGL-LDLILKNRIIDIYGECGEVCYALNIFEML 526
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
++D+ T+ S++ A +G EAV +F +M+N GI+P V VG+L A + + G
Sbjct: 527 DKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGK 586
Query: 238 EIFQSMTR-DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACK 296
EI + R + +E + +VD+ S G A K D ++ ++++A
Sbjct: 587 EIHGFLIRGKFPVEGAV--VSSLVDMYSGCGSMNYALKVFDEAK-CKDVVLWTAMINATG 643
Query: 297 IHGKLQLGEQIAKRLLD 313
+HG + I KR+L+
Sbjct: 644 MHGHGKQAIYIFKRMLE 660
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 181/442 (40%), Positives = 278/442 (62%), Gaps = 1/442 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D+V +++ Y E G V+ A +F ++ KD V WT+MI V NG AL+LF M
Sbjct: 516 SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLM 575
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ V P+ +++V +LSA + L AL+ G+ IH ++ + L + L++MY+RCG +
Sbjct: 576 KETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTL 635
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+K+ VF ++ +D+ + S+I MHG A+++FR M ++ I P + FV VL AC
Sbjct: 636 EKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYAC 695
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
SH GL++ G +SM +Y +EP EHY C+VDLL R EEAY F+ M++ P +
Sbjct: 696 SHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEV 755
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+LL AC+IH +LGE A++LL+ + G YVL+SN Y++ +WK+ +R +MK
Sbjct: 756 WCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMKA 815
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQEL-KQIVKLEGYSPSTEVVLH 406
+G++K PGCS IEV N++H F+ D HPQ +IY K+ ++ +++ K GY T+ VLH
Sbjct: 816 SGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLH 875
Query: 407 DIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKI 466
+ ++ EK L HSERLAI YG+++T ++R+ KNLRVC DCH+ KLI+ +R++
Sbjct: 876 NAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFFEREL 935
Query: 467 IVRDRNRFHHFENGTCSCGDYW 488
++RD NRFHHF+ G CSCGD W
Sbjct: 936 VMRDANRFHHFKGGVCSCGDVW 957
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 163/371 (43%), Gaps = 48/371 (12%)
Query: 1 EGREIHGQVLKLGLRSNR---STRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMI 57
EG+++H ++ N STRL V +YGKCG DA +LFD MP
Sbjct: 96 EGQQVHAHMITSNALFNSVFLSTRL--VFMYGKCGCLVDAEKLFDGMPH----------- 142
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
K W AMI V NGE +L+L+REM+ + +
Sbjct: 143 ---------------------KTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDAC 181
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T C+L AC L G +H K V +++ MY++C D++ A Q+F+ M
Sbjct: 182 TFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRM 241
Query: 178 KER-DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
E+ DV ++NS+I+ + +G+SIEA+ +F EM + P TFV L AC + G
Sbjct: 242 PEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQG 301
Query: 237 FEIFQSMTR-DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
I ++ + Y I + + ++ + +R G+ EA + NM D I S+LS
Sbjct: 302 MFIHATVLKSSYYINVFVAN--ALIAMYARFGKMGEAANIFYNMD-DWDTISWNSMLSGF 358
Query: 296 KIHGKLQLGEQIAKRLLDC-RSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEP 354
+G Q + D + D + + A A SG +QI A + G+
Sbjct: 359 VQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLD--- 415
Query: 355 GCSSIEVNNEI 365
S ++V N +
Sbjct: 416 --SDLQVGNSL 424
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 124/264 (46%), Gaps = 32/264 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G E+HG +K G S +V +Y KC + A QLFD MPE DVV+
Sbjct: 199 GAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVS--------- 249
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
W +MI NG+ AL LF EMQ+ ++ PN T V
Sbjct: 250 ----------------------WNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVA 287
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
L AC ++ G +IH+ + K +N V ALI MY+R G + +A +F M + D
Sbjct: 288 ALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWD 347
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
++NS+++G +G EA++ + EM + G +P V + ++ A + G G +I
Sbjct: 348 TISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHA 407
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSR 265
++ G++ ++ +VD+ ++
Sbjct: 408 YAMKN-GLDSDLQVGNSLVDMYAK 430
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 147/304 (48%), Gaps = 7/304 (2%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMI 57
E + G++ K L N T + ++ K M + + + + +V + +I
Sbjct: 265 EALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALI 324
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
Y G + A +F + DT+ W +M+ G V+NG AL + EM+ +P+ V
Sbjct: 325 AMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLV 384
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
++ +++A ++ G G IH+Y K+ +D + VG +L++MY++ + +F++M
Sbjct: 385 AVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKM 444
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
++DV ++ ++IAG A +G A+E+FRE+ +GI + +L ACS L+
Sbjct: 445 PDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVK 504
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
EI + R G+ + G IVD+ G + A ++ D + S++S C +
Sbjct: 505 EIHSYIIRK-GLSDLVLQNG-IVDVYGECGNVDYAARMFELIEFK-DVVSWTSMIS-CYV 560
Query: 298 HGKL 301
H L
Sbjct: 561 HNGL 564
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 34/197 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+G+EIHG +++ G S LV++Y +CG + + +F+ + D+V T MIN Y
Sbjct: 602 KGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRN-KDLVLWTSMINAY 660
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG C A A+DLFR M+ +++ P+ + V
Sbjct: 661 GMHG------------------CGRA-------------AIDLFRRMEDESIAPDHIAFV 689
Query: 121 CVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
VL ACS G + G R++ S +++++ L+++ R +++A Q + M+
Sbjct: 690 AVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEV 749
Query: 179 ERDVTTYNSLIAGLAMH 195
E + +L+ +H
Sbjct: 750 EPTAEVWCALLGACQIH 766
>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 183/440 (41%), Positives = 276/440 (62%), Gaps = 4/440 (0%)
Query: 50 VVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
+ + T ++ Y+ LV+++ VF ++ + V WT++I GLV+NG AL FR+M R
Sbjct: 302 LASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMR 361
Query: 110 DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDK 169
D+++PN T+ L CS L E GR IH + K+ D + G LI++Y +CG D
Sbjct: 362 DSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDM 421
Query: 170 ALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSH 229
A VF+ + E DV + N++I A +G EA+++F MIN G++P VT + VL AC++
Sbjct: 422 ARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNN 481
Query: 230 GGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLG 289
LV+ G E+F S +D I +HY C+VDLL R GR EEA + +T I PD ++
Sbjct: 482 SRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWR 539
Query: 290 SLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG 349
+LLSACK+H K+++ E+I +++L+ D GT +L+SN YAS+GKW +++++KMK+
Sbjct: 540 TLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMK 599
Query: 350 VQKEPGCSSIEVNNEIHEFILGDI-RHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
++K P S +E+N E H F+ GD+ HP EQI + ++EL + K GY V D+
Sbjct: 600 LKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDM 659
Query: 409 EDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIV 468
E+ KE +L HSE+LAI + + +IR++KNLRVC DCHS IK+++ + KR+II
Sbjct: 660 EETAKERSLHQHSEKLAIAFA-VWRNVGGSIRILKNLRVCVDCHSWIKIVSRVMKREIIC 718
Query: 469 RDRNRFHHFENGTCSCGDYW 488
RD RFHHF +G+CSCGDYW
Sbjct: 719 RDSKRFHHFRDGSCSCGDYW 738
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 126/248 (50%), Gaps = 4/248 (1%)
Query: 46 ECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFR 105
E ++V + +++ YV+ G A V RV+ KD V TA+I G + GE A+ F+
Sbjct: 197 EVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQ 256
Query: 106 EMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCG 165
M + V+PNE T VL +C L + G+ IH M K + +L+ MY RC
Sbjct: 257 SMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCS 316
Query: 166 DIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLN 225
+D +L+VF+ ++ + ++ SLI+GL +GR A+ FR+M+ I+P T L
Sbjct: 317 LVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALR 376
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---YDFITNMKIA 282
CS+ + + G +I +T+ YG + ++DL + G + A +D ++ + +
Sbjct: 377 GCSNLAMFEEGRQIHGIVTK-YGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVI 435
Query: 283 PDHIMLGS 290
+ M+ S
Sbjct: 436 SLNTMIYS 443
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 136/291 (46%), Gaps = 34/291 (11%)
Query: 51 VASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD 110
++ + +++ ++ G ++ A +VF + + V W ++I L+++ A++++R M +
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 111 NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHI-VGGALINMYSRCGDIDK 169
NV P+E T+ V A S L + + H ++++++ VG AL++MY + G +
Sbjct: 160 NVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTRE 219
Query: 170 ALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS- 228
A V + ++E+DV +LI G + G EAV+ F+ M+ + ++P + T+ VL +C
Sbjct: 220 AKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGN 279
Query: 229 ----------HGGLVDLGFE--------IFQSMTRDYGIEPQIEHYGCI----------- 259
HG +V GFE + R ++ + + CI
Sbjct: 280 LKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSL 339
Query: 260 VDLLSRVGRPEEAY-DFITNMK--IAPDHIMLGSLLSACKIHGKLQLGEQI 307
+ L + GR E A +F M+ I P+ L S L C + G QI
Sbjct: 340 ISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQI 390
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 33/203 (16%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR+IHG V K G ++ L++LYGKCG A +FD + E DV++ MI Y
Sbjct: 386 EGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEV-DVISLNTMIYSY 444
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
++G F R ALDLF M ++PN+VT++
Sbjct: 445 AQNG--------FGR-----------------------EALDLFERMINLGLQPNDVTVL 473
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL AC+ +E G + K +I L + ++++ R G +++A + E+
Sbjct: 474 SVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINP 533
Query: 181 DVTTYNSLIAGLAMHGRSIEAVE 203
D+ + +L++ +H R +E E
Sbjct: 534 DLVLWRTLLSACKVH-RKVEMAE 555
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 188/488 (38%), Positives = 287/488 (58%), Gaps = 34/488 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIHG VL+ GL N + L+ LY C + F+ M +
Sbjct: 536 GKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGD--------------- 580
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K++VCW AM+ G +N AL LFR+M D + P+E+ I
Sbjct: 581 -----------------KNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIAS 623
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L ACSQL AL LG+ +H + K+ + ++ V +L++MY++ G + + ++F + ++
Sbjct: 624 ILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKE 683
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++N +I G +HG+ +AVE+F +M +P + TF+GVL AC H GLV G
Sbjct: 684 VASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLA 743
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M Y +EP++EHY C++D+L R GR EA +FI M PD + SLLS+ + L
Sbjct: 744 QMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDL 803
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++GE+ A++LL + + +Y+LLSN YA++GKW +R KMK+ +QK+ GCS IE+
Sbjct: 804 EMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIEL 863
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQEL-KQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+++ FI G+ +P ++I K L KQIV++ GY+P VLH++E+ EK L H
Sbjct: 864 RGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEI-GYTPDCSCVLHELEEVEKRKILKGH 922
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE++AIC+G ++TK TT+R+ KNLR+C DCH+ K I+ KR+I++RD RFHHF+ G
Sbjct: 923 SEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKG 982
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 983 ICSCGDYW 990
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 185/424 (43%), Gaps = 88/424 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLF-------------------- 41
G IHG +KLGL L+++Y KCG +A LF
Sbjct: 332 GMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSR 391
Query: 42 -----------------DEMPECNDVVASTVMINCYVE---------HG----------- 64
+E+ E N+V ++ C E HG
Sbjct: 392 EGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKE 451
Query: 65 LVENAF--------------EVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD 110
L+ NAF VF + K W A+I G +NG+ +ALD + EM R
Sbjct: 452 LINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRL 511
Query: 111 NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
+ P++ +IV +L AC +LG L+ G+ IH ++ ++ +++N V +L+++Y C
Sbjct: 512 GILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYG 571
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
FE M +++ +N++++G + + EA+ +FR+M++ G+ P ++ +L ACS
Sbjct: 572 RTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQL 631
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGC-IVDLLSR---VGRPEEAYDFITNMKIAPDHI 286
+ LG E+ ++ +E C ++D+ ++ +G + ++ + ++A ++
Sbjct: 632 SALGLGKEVHCFALKNSLMEDNF--VACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNV 689
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG----TYVLLSNAYASSGKWKEAVQIR 342
M ++ +HG+ G + + D + +D T++ + A +G E +
Sbjct: 690 M----ITGFGVHGQ---GNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYL 742
Query: 343 AKMK 346
A+M+
Sbjct: 743 AQMQ 746
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 140/277 (50%), Gaps = 14/277 (5%)
Query: 27 LYGKCGEFKDAM--QLFDEM-----PECNDVVASTVMINCYVEHGLVENAFEVFSRVKVK 79
L KCG++K+ + DEM D V +T +I Y G + VF R+ K
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172
Query: 80 DTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPNEVTIVCVLSACSQLGALELGRWI 138
+ W A++ G VRN A+ F E+ +P+ T C++ AC+ + LG+ +
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232
Query: 139 HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRS 198
H K + ++ VG A+I +Y +CG +D+A+++F++M E+++ ++NSLI G + +G
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFW 292
Query: 199 IEAVEMFREMINQ--GIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHY 256
+EA FR ++ G+ P T V +L CS G VD+G + M G+ ++
Sbjct: 293 LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGM-VIHGMAVKLGLVHELMVC 351
Query: 257 GCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGS 290
++D+ S+ G EA + I N + + M+G+
Sbjct: 352 NALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGA 388
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 175/441 (39%), Gaps = 111/441 (25%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +HG +K+GL + ++ LYGKCG +A++LFD+MPE N +++ +I +
Sbjct: 229 GKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQN-LISWNSLIRGFS 287
Query: 62 EHGLVENAFEVFSRV-----------------------------------------KVKD 80
E+G A+ F + V +
Sbjct: 288 ENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHE 347
Query: 81 TVCWTAMIDGLVRNGEMARALDLFREMQRDNV---------------------------- 112
+ A+ID + G ++ A LFR+++ +V
Sbjct: 348 LMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWM 407
Query: 113 -----RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
NEVTI+ +L AC + L R +H Y +H ++ A I Y++CG +
Sbjct: 408 EEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSL 467
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A VF M + V+++N++I G A +G I+A++ + EM GI P + V +L AC
Sbjct: 468 VFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLAC 527
Query: 228 SHGGLVDLGFEIFQSMTRDYGIE-----------------------PQIEHYG-----CI 259
GL+ G EI + R+ G+E E G C
Sbjct: 528 GRLGLLQYGKEIHGFVLRN-GLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCW 586
Query: 260 VDLLSRVGR---PEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQI-AKRLL 312
+LS + P EA M + PD I + S+L AC L LG+++ L
Sbjct: 587 NAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALK 646
Query: 313 DCRSADSGTYVLLSNAYASSG 333
+ D+ L + YA SG
Sbjct: 647 NSLMEDNFVACSLMDMYAKSG 667
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 188/488 (38%), Positives = 287/488 (58%), Gaps = 34/488 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIHG VL+ GL N + L+ LY C + F+ M +
Sbjct: 536 GKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGD--------------- 580
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K++VCW AM+ G +N AL LFR+M D + P+E+ I
Sbjct: 581 -----------------KNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIAS 623
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L ACSQL AL LG+ +H + K+ + ++ V +L++MY++ G + + ++F + ++
Sbjct: 624 ILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKE 683
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++N +I G +HG+ +AVE+F +M +P + TF+GVL AC H GLV G
Sbjct: 684 VASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLA 743
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M Y +EP++EHY C++D+L R GR EA +FI M PD + SLLS+ + L
Sbjct: 744 QMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDL 803
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++GE+ A++LL + + +Y+LLSN YA++GKW +R KMK+ +QK+ GCS IE+
Sbjct: 804 EMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIEL 863
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQEL-KQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
+++ FI G+ +P ++I K L KQIV++ GY+P VLH++E+ EK L H
Sbjct: 864 RGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEI-GYTPDCSCVLHELEEVEKRKILKGH 922
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SE++AIC+G ++TK TT+R+ KNLR+C DCH+ K I+ KR+I++RD RFHHF+ G
Sbjct: 923 SEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKG 982
Query: 481 TCSCGDYW 488
CSCGDYW
Sbjct: 983 ICSCGDYW 990
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 185/424 (43%), Gaps = 88/424 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLF-------------------- 41
G IHG +KLGL L+++Y KCG +A LF
Sbjct: 332 GMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSR 391
Query: 42 -----------------DEMPECNDVVASTVMINCYVE---------HG----------- 64
+E+ E N+V ++ C E HG
Sbjct: 392 EGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKE 451
Query: 65 LVENAF--------------EVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD 110
L+ NAF VF + K W A+I G +NG+ +ALD + EM R
Sbjct: 452 LINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRL 511
Query: 111 NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
+ P++ +IV +L AC +LG L+ G+ IH ++ ++ +++N V +L+++Y C
Sbjct: 512 GILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYG 571
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
FE M +++ +N++++G + + EA+ +FR+M++ G+ P ++ +L ACS
Sbjct: 572 RTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQL 631
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGC-IVDLLSR---VGRPEEAYDFITNMKIAPDHI 286
+ LG E+ ++ +E C ++D+ ++ +G + ++ + ++A ++
Sbjct: 632 SALGLGKEVHCFALKNSLMEDNF--VACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNV 689
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG----TYVLLSNAYASSGKWKEAVQIR 342
M ++ +HG+ G + + D + +D T++ + A +G E +
Sbjct: 690 M----ITGFGVHGQ---GNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYL 742
Query: 343 AKMK 346
A+M+
Sbjct: 743 AQMQ 746
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 140/277 (50%), Gaps = 14/277 (5%)
Query: 27 LYGKCGEFKDAM--QLFDEM-----PECNDVVASTVMINCYVEHGLVENAFEVFSRVKVK 79
L KCG++K+ + DEM D V +T +I Y G + VF R+ K
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172
Query: 80 DTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPNEVTIVCVLSACSQLGALELGRWI 138
+ W A++ G VRN A+ F E+ +P+ T C++ AC+ + LG+ +
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232
Query: 139 HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRS 198
H K + ++ VG A+I +Y +CG +D+A+++F++M E+++ ++NSLI G + +G
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFW 292
Query: 199 IEAVEMFREMINQ--GIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHY 256
+EA FR ++ G+ P T V +L CS G VD+G + M G+ ++
Sbjct: 293 LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGM-VIHGMAVKLGLVHELMVC 351
Query: 257 GCIVDLLSRVGRPEEA---YDFITNMKIAPDHIMLGS 290
++D+ S+ G EA + I N + + M+G+
Sbjct: 352 NALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGA 388
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 175/441 (39%), Gaps = 111/441 (25%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +HG +K+GL + ++ LYGKCG +A++LFD+MPE N +++ +I +
Sbjct: 229 GKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQN-LISWNSLIRGFS 287
Query: 62 EHGLVENAFEVFSRV-----------------------------------------KVKD 80
E+G A+ F + V +
Sbjct: 288 ENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHE 347
Query: 81 TVCWTAMIDGLVRNGEMARALDLFREMQRDNV---------------------------- 112
+ A+ID + G ++ A LFR+++ +V
Sbjct: 348 LMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWM 407
Query: 113 -----RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
NEVTI+ +L AC + L R +H Y +H ++ A I Y++CG +
Sbjct: 408 EEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSL 467
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
A VF M + V+++N++I G A +G I+A++ + EM GI P + V +L AC
Sbjct: 468 VFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLAC 527
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQI---------------EHYG-------------CI 259
GL+ G EI + R+ G+E YG C
Sbjct: 528 GRLGLLQYGKEIHGFVLRN-GLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCW 586
Query: 260 VDLLSRVGR---PEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQI-AKRLL 312
+LS + P EA M + PD I + S+L AC L LG+++ L
Sbjct: 587 NAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALK 646
Query: 313 DCRSADSGTYVLLSNAYASSG 333
+ D+ L + YA SG
Sbjct: 647 NSLMEDNFVACSLMDMYAKSG 667
>gi|334183024|ref|NP_174678.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806500|sp|Q9FX24.2|PPR71_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g34160
gi|332193557|gb|AEE31678.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 581
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 183/445 (41%), Positives = 283/445 (63%), Gaps = 11/445 (2%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D + T +++ Y ++G + +A+++F + V+D W A+I GLV + A++L++ M+
Sbjct: 143 DSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRME 202
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWI-HSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ +R +EVT+V L ACS LG ++ G I H Y N IV A I+MYS+CG +
Sbjct: 203 TEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSND-----NVIVSNAAIDMYSKCGFV 257
Query: 168 DKALQVFEEMK-ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
DKA QVFE+ ++ V T+N++I G A+HG + A+E+F ++ + GI+P V+++ L A
Sbjct: 258 DKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTA 317
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
C H GLV+ G +F +M G+E ++HYGC+VDLLSR GR EA+D I +M + PD +
Sbjct: 318 CRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPV 376
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
+ SLL A +I+ +++ E ++ + + + G +VLLSN YA+ G+WK+ ++R M+
Sbjct: 377 LWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDME 436
Query: 347 EAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH 406
V+K PG S IE IHEF D H Q +IY+K+ E++ ++ +GY T +VLH
Sbjct: 437 SKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTGLVLH 496
Query: 407 DIEDWEKEWALAIHSERLAICYGLI---STKPYTTIRVVKNLRVCNDCHSMIKLIANITK 463
DI + EKE AL HSE+LA+ YGL+ + +RV+ NLR+C DCH + K I+ I K
Sbjct: 497 DIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRICGDCHVVFKHISKIYK 556
Query: 464 RKIIVRDRNRFHHFENGTCSCGDYW 488
R+IIVRDR RFH F++G+CSC D+W
Sbjct: 557 REIIVRDRVRFHRFKDGSCSCRDFW 581
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 139/303 (45%), Gaps = 15/303 (4%)
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV------RPNEV 117
G + A ++F + T W A+I G + + A +R M + + R + +
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T L AC++ +H + + + + ++ L++ YS+ GD+ A ++F+EM
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEM 170
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
RDV ++N+LIAGL R+ EA+E+++ M +GIR ++VT V L ACSH G V G
Sbjct: 171 PVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGE 230
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
IF + D I +D+ S+ G ++AY + ++++ +
Sbjct: 231 NIFHGYSNDNVIVSN-----AAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAV 285
Query: 298 HGKLQLGEQIAKRLLDCR-SADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ---KE 353
HG+ +I +L D D +Y+ A +G + + + M GV+ K
Sbjct: 286 HGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKH 345
Query: 354 PGC 356
GC
Sbjct: 346 YGC 348
>gi|125599411|gb|EAZ38987.1| hypothetical protein OsJ_23405 [Oryza sativa Japonica Group]
Length = 531
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 206/493 (41%), Positives = 288/493 (58%), Gaps = 47/493 (9%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EGR++H KLGL + + VVA++ +++ Y
Sbjct: 81 EGRQLHALAAKLGLAPSHT------------------------------VVANS-LLHLY 109
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN-VRPNEVTI 119
GL A ++F R+ + V W +D LV NG+ ALDLFREMQRD + P+ T+
Sbjct: 110 SSCGLPGAALDLFRRIPDRSLVSWNTAVDALVGNGDHLAALDLFREMQRDTELAPDAYTV 169
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
VL A +LG G + M ++ +L+++Y +CG ++ A QVF+ M
Sbjct: 170 QSVLGA--ELGGDGDGEAVSRDM---------LINNSLVDLYGKCGALELAQQVFDRMPA 218
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMIN-QGIRPTKVTFVGVLNACSHGGLVDLGFE 238
RD+ ++N +I LA HGR E+VE+F M + + P +TFV VL+AC+HGGLV+ G
Sbjct: 219 RDLASWNVMILTLANHGRVCESVELFDRMTQVEKMAPNAITFVAVLSACNHGGLVEEGRR 278
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC-KI 297
F M Y I+P+IEHYGC+VDLL+R G EEA D + M PD I+ SLL AC K
Sbjct: 279 YFAMMVDQYRIKPRIEHYGCMVDLLARAGFIEEALDIVAGMNCRPDAIIWRSLLDACCKK 338
Query: 298 HGKLQLGEQIAKRLLDCRS-ADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGC 356
+ L+L E +AK L+ A SG YVLLS YAS+ +W + +R M E GV+KEPG
Sbjct: 339 NAGLELTEAMAKLALEVPDDAVSGVYVLLSRVYASAQRWNDVGMVRRLMVEEGVKKEPGF 398
Query: 357 SSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPS-TEVVLHDIEDWEKEW 415
SSIE++ +H+F+ GD HPQ E IY+K+ E++ + GY P +E L D K
Sbjct: 399 SSIEMDGLVHQFVAGDTSHPQSEAIYEKLDEIQLKLTSAGYKPDLSEAPLVASIDNAKGA 458
Query: 416 ALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFH 475
AL +HSERLAI +GL++ P IR++KNLRVC DCH++ KLI+ + +IIVRDR RFH
Sbjct: 459 ALRLHSERLAISFGLLNATPGAPIRILKNLRVCKDCHTISKLISKLYGVEIIVRDRIRFH 518
Query: 476 HFENGTCSCGDYW 488
HF++G+CSC DYW
Sbjct: 519 HFKDGSCSCKDYW 531
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 120/254 (47%), Gaps = 39/254 (15%)
Query: 93 RNGEMA-RALDLFREMQR-DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLN 150
R ++A RAL LFR +Q + P V++ VLSA + L AL GR +H+ K + +
Sbjct: 38 RRADLAHRALLLFRSLQSTPSPPPPHVSLPAVLSAAAFLSALPEGRQLHALAAKLGLAPS 97
Query: 151 H-IVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
H +V +L+++YS CG AL +F + +R + ++N+ + L +G + A+++FREM
Sbjct: 98 HTVVANSLLHLYSSCGLPGAALDLFRRIPDRSLVSWNTAVDALVGNGDHLAALDLFREMQ 157
Query: 210 -NQGIRPTKVTFVGVLNACSHG------------------------GLVDLGFEIFQSM- 243
+ + P T VL A G G ++L ++F M
Sbjct: 158 RDTELAPDAYTVQSVLGAELGGDGDGEAVSRDMLINNSLVDLYGKCGALELAQQVFDRMP 217
Query: 244 TRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM----KIAPDHIMLGSLLSACKIHG 299
RD + + ++ L+ GR E+ + M K+AP+ I ++LSAC G
Sbjct: 218 ARD------LASWNVMILTLANHGRVCESVELFDRMTQVEKMAPNAITFVAVLSACNHGG 271
Query: 300 KLQLGEQIAKRLLD 313
++ G + ++D
Sbjct: 272 LVEEGRRYFAMMVD 285
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 184/470 (39%), Positives = 289/470 (61%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H V K ++ + L+++Y KCG+ A +FD + V+I+ Y
Sbjct: 254 GRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNVIIDGYC 313
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G V+ A +F ++ +D + + +MI G + +G + AL LF +++R +R + T+V
Sbjct: 314 KLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQLRRHGMRADNFTVVS 373
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+AC+ LGAL GR +H+ + + ++ + + AL++MY +CG +D+A VF M ERD
Sbjct: 374 LLTACASLGALPQGRALHASIEQRIVEEDVYLVTALVDMYMKCGRVDEATAVFHRMGERD 433
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V T++++IAGLA +G ++A+E F +M G +PT VT++ VL ACSH L++ G + F
Sbjct: 434 VHTWSAMIAGLAFNGMGMDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLNEGRQHFN 493
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M + + PQIEHYGC++DLL+R G +EA + M + P+ ++ S+LSAC++H +
Sbjct: 494 EMRSLHKLHPQIEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWASILSACRVHKNI 553
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
L A+ LL + YV L N Y S +W EA +IR M+E GV+K G SSI V
Sbjct: 554 DLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWVEAKRIRMLMEEQGVKKTAGYSSITV 613
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
++H+F++ D HP +I M+E+ + +K GYSP+T + D+++ EKE AL HS
Sbjct: 614 AGQVHKFVVNDQSHPWTLEIITMMEEIARRLKSAGYSPATSRIAVDVDEEEKEQALLAHS 673
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDR 471
E++AI +GLIS P I ++KNLRVC DCHS IKLI+ + R+IIVRDR
Sbjct: 674 EKIAIAFGLISLPPNLPIHIMKNLRVCEDCHSAIKLISQLWNREIIVRDR 723
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 149/310 (48%), Gaps = 35/310 (11%)
Query: 3 REIHGQVLKLGLRSN-RSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
R +H L+ L S R L+ +Y G DA + FDE+P + VV +TV I V
Sbjct: 122 RMLHAACLRTMLPSAARIVANPLIHMYASLGLTDDARRAFDEVPVKDAVVWATV-IGGLV 180
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
GL++ A + + ++ V WT++I G R G A A+ F M D V P+EV ++
Sbjct: 181 RWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVEPDEVAVIG 240
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI-------------- 167
LSACS+L LE GR +H +GK RI + + LI+MY++CGDI
Sbjct: 241 ALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQ 300
Query: 168 ------------------DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
D A +F++M RDV T+NS+I G GR +A+++F ++
Sbjct: 301 KPEPWNVIIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQLR 360
Query: 210 NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRP 269
G+R T V +L AC+ G + G + S+ + +E + +VD+ + GR
Sbjct: 361 RHGMRADNFTVVSLLTACASLGALPQGRALHASIEQRI-VEEDVYLVTALVDMYMKCGRV 419
Query: 270 EEAYDFITNM 279
+EA M
Sbjct: 420 DEATAVFHRM 429
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 116/270 (42%), Gaps = 48/270 (17%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRI-DLNHIVGGALINMYSRCGDIDKALQVFEEM--- 177
V C+ L R +H+ + + IV LI+MY+ G D A + F+E+
Sbjct: 108 VFRCCAAGAGAGLCRMLHAACLRTMLPSAARIVANPLIHMYASLGLTDDARRAFDEVPVK 167
Query: 178 ----------------------------KERDVTTYNSLIAGLAMHGRSIEAVEMFREMI 209
ER+V ++ SLIAG + GR +AV F M+
Sbjct: 168 DAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCML 227
Query: 210 NQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG-- 267
+ G+ P +V +G L+ACS ++ G + + I+ + ++D+ ++ G
Sbjct: 228 SDGVEPDEVAVIGALSACSKLKNLEFG-RLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDI 286
Query: 268 -RPEEAYDFI-TNMKIAPDHIMLGSLLSACKIHGKLQLGE-QIAKRLLDCRSA-DSGTYV 323
+ + +D + K P +++ I G +LG IA+ L D A D T+
Sbjct: 287 AQAQAVFDAVGRGQKPEPWNVI---------IDGYCKLGHVDIARSLFDQMGARDVITFN 337
Query: 324 LLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
+ Y SG+ ++A+Q+ +++ G++ +
Sbjct: 338 SMITGYIHSGRLRDALQLFMQLRRHGMRAD 367
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 190/492 (38%), Positives = 279/492 (56%), Gaps = 36/492 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G + HG ++K G N L++LY KC M EC
Sbjct: 262 GMQFHGMMIKSGFHGNSHVGSGLIDLYSKCA---------GGMVECR------------- 299
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMAR-ALDLFREMQRDNVRPNEVTIV 120
+VF + D V W MI G + +++ + FREMQ + P++ + V
Sbjct: 300 ---------KVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFV 350
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHI-VGGALINMYSRCGDIDKALQVFEEMKE 179
CV SACS L + +G+ +H+ K I N + V AL+ MYS+CG++ A +VF+ M E
Sbjct: 351 CVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPE 410
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
++ + NS+IAG A HG +E++ +F M+ + I P +TF+ VL+AC H G V+ G +
Sbjct: 411 HNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKY 470
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F M + IEP+ EHY C++DLL R G+ +EA I M P I +LL AC+ HG
Sbjct: 471 FNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHG 530
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
++L + A L ++ YV+LSN YAS+ +W+EA ++ M+E GV+K+PGCS I
Sbjct: 531 NVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWI 590
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVL---HDIEDWEKEWA 416
E++ ++H F+ D HP ++I+ M E+ + +K GY P L ++E EKE
Sbjct: 591 EIDKKVHVFVAEDTSHPMIKEIHVYMGEILRKMKQAGYVPDIRWALVKDEEVEPDEKERR 650
Query: 417 LAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHH 476
L HSE+LA+ +GLIST+ + I VVKNLR+C DCH+ IKLI+ IT R+I VRD +RFH
Sbjct: 651 LLYHSEKLAVAFGLISTEEWVPILVVKNLRICGDCHNAIKLISAITGREITVRDTHRFHC 710
Query: 477 FENGTCSCGDYW 488
F+ G CSCGDYW
Sbjct: 711 FKEGHCSCGDYW 722
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 116/250 (46%), Gaps = 17/250 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H K + + LY KCG +A FD + + +V + +IN Y
Sbjct: 28 GKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFD-LTQYPNVFSYNTLINAYA 86
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+H L+ A +VF + D V + +I GE AL LF E++ + T+
Sbjct: 87 KHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRFGLDGFTLSG 146
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE-- 179
V+ AC + L R +H ++ D V A++ YSR G +++A +VF EM E
Sbjct: 147 VIIACGD--DVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARRVFREMGEGG 204
Query: 180 -RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS---------- 228
RD ++N++I H +EAVE+FREM+ +G++ T VL A +
Sbjct: 205 GRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQ 264
Query: 229 -HGGLVDLGF 237
HG ++ GF
Sbjct: 265 FHGMMIKSGF 274
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 191/451 (42%), Gaps = 60/451 (13%)
Query: 53 STVMINCYVEHGLVENAFEVFSRVKV---KDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
+ ++ CY G + A VF + +D V W AMI ++ E A++LFREM R
Sbjct: 177 NNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVR 236
Query: 110 DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC-GDID 168
++ + T+ VL+A + + L G H M K N VG LI++YS+C G +
Sbjct: 237 RGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMV 296
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMH-GRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+ +VFEE+ D+ +N++I+G + + S + + FREM + G P +FV V +AC
Sbjct: 297 ECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSAC 356
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA--------------- 272
S+ +G ++ + ++ +V + S+ G +A
Sbjct: 357 SNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSL 416
Query: 273 -------------------YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
++ + IAP+ I ++LSAC GK++ G++ + +
Sbjct: 417 NSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKE 476
Query: 314 CR--SADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILG 371
++ Y + + +GK KEA +I M PG SIE +LG
Sbjct: 477 RFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMP-----FNPG--SIEWAT-----LLG 524
Query: 372 DIR-HPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGL 430
R H E K E Q LE Y+ + V+L ++ W A +RL G+
Sbjct: 525 ACRKHGNVELAVKAANEFLQ---LEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGV 581
Query: 431 ISTKPYTTIRVVKNLRVC---NDCHSMIKLI 458
+ I + K + V + H MIK I
Sbjct: 582 KKKPGCSWIEIDKKVHVFVAEDTSHPMIKEI 612
>gi|302800080|ref|XP_002981798.1| hypothetical protein SELMODRAFT_115031 [Selaginella moellendorffii]
gi|300150630|gb|EFJ17280.1| hypothetical protein SELMODRAFT_115031 [Selaginella moellendorffii]
Length = 483
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 189/479 (39%), Positives = 281/479 (58%), Gaps = 3/479 (0%)
Query: 13 GLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMINCYVEHGLVENA 69
GLR +RST ++E + L M D V T +IN Y + + A
Sbjct: 5 GLRGDRSTFTSVIEACACLPDLTLGQLLHYRMITLGCELDTVLGTNLINMYSRCDVPDKA 64
Query: 70 FEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQL 129
EVF + K V WTAMI + G+ AL+LF+ M + VR ++V VL C+ L
Sbjct: 65 IEVFDAMHNKSVVVWTAMIAAHSQQGQGLEALELFKRMDIEGVRADKVAFSLVLDVCANL 124
Query: 130 GALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLI 189
AL R +H+ + ++ + +V L+NMY +CG +++A QVFE+M +D+ ++ S+I
Sbjct: 125 AALAQARILHATVAGTELEQDMVVKNTLVNMYGKCGKLNEARQVFEKMASKDMVSWTSII 184
Query: 190 AGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGI 249
A A G + A E+F M G V FV V++ C+H GL+ F SM +DYG+
Sbjct: 185 AAYAQQGSASAAFELFHAMQQAGEAIDTVIFVKVMSGCNHAGLLKDARNWFVSMLQDYGL 244
Query: 250 EPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAK 309
P E+Y CI+DLL R+G+ ++ D + NM + PD I S L+ACK+H ++ G + A+
Sbjct: 245 SPVNENYACILDLLGRLGQLQDVEDLLENMTLEPDFIAWMSFLNACKVHKDMKRGVRAAQ 304
Query: 310 RLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFI 369
RL+ +S +YVLLS+ +A GK+ A ++R ++ +K PG S IE+ +++H+F
Sbjct: 305 RLVQLNRRNSASYVLLSDIHAVCGKFDAAAKLRRRIGRDCGKKVPGLSWIEIKDKVHKFA 364
Query: 370 LGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYG 429
G HP+ ++I+ ++Q L +++ GY P TEVVL D+E+ EKE L HSE+ A+ +G
Sbjct: 365 SGSRTHPRNDEIFAELQRLGVLMREAGYVPDTEVVLMDVEEEEKEQVLCYHSEKQAMAFG 424
Query: 430 LISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
LIST T +RVVKNLRVC DCH+ K I+ IT R+I VRD NRFH F++G CSC DYW
Sbjct: 425 LISTPSGTPLRVVKNLRVCTDCHTATKFISKITGRQITVRDANRFHEFKDGFCSCKDYW 483
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 11/211 (5%)
Query: 107 MQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
M+ + +R + T V+ AC+ L L LG+ +H M +L+ ++G LINMYSRC
Sbjct: 1 MELEGLRGDRSTFTSVIEACACLPDLTLGQLLHYRMITLGCELDTVLGTNLINMYSRCDV 60
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNA 226
DKA++VF+ M + V + ++IA + G+ +EA+E+F+ M +G+R KV F VL+
Sbjct: 61 PDKAIEVFDAMHNKSVVVWTAMIAAHSQQGQGLEALELFKRMDIEGVRADKVAFSLVLDV 120
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA---------YDFIT 277
C++ + I + +E + +V++ + G+ EA D ++
Sbjct: 121 CANLAALAQA-RILHATVAGTELEQDMVVKNTLVNMYGKCGKLNEARQVFEKMASKDMVS 179
Query: 278 NMKIAPDHIMLGSLLSACKI-HGKLQLGEQI 307
I + GS +A ++ H Q GE I
Sbjct: 180 WTSIIAAYAQQGSASAAFELFHAMQQAGEAI 210
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+ R +H V L + + LV +YGKCG+ +A Q+F++M D+V+ T +I Y
Sbjct: 129 QARILHATVAGTELEQDMVVKNTLVNMYGKCGKLNEARQVFEKMAS-KDMVSWTSIIAAY 187
Query: 61 VEHGLVENAFEVFSRVK----VKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPN 115
+ G AFE+F ++ DTV + ++ G G + A + F M +D + P
Sbjct: 188 AQQGSASAAFELFHAMQQAGEAIDTVIFVKVMSGCNHAGLLKDARNWFVSMLQDYGLSPV 247
Query: 116 EVTIVCVLSACSQLGALE 133
C+L +LG L+
Sbjct: 248 NENYACILDLLGRLGQLQ 265
>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 180/489 (36%), Positives = 286/489 (58%), Gaps = 33/489 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR++HG+V+ L + L+++Y KCGE + A+ +FD
Sbjct: 277 GRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDR------------------ 318
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+S W+ M+ G V+NG AL+ FR M R+ V + +
Sbjct: 319 -----------WSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTS 367
Query: 122 VLSACSQLGALELGRWIHSYMGK--HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
V SAC+ G +E GR +H ++ K HR D + A+++MYS+ G ++ A ++F +
Sbjct: 368 VASACANAGMVEQGRQVHGFVEKLGHRFDAP--LASAIVDMYSKSGSLEDACRIFRSAQT 425
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
++V + +++ A HG+ A+E+F M + I P ++T V VL+ACSH GLV G+
Sbjct: 426 KNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHY 485
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F M +YGI P EHY C+VDL R G ++A +FI KI+ + ++ +LLSAC++H
Sbjct: 486 FNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLHK 545
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
++ + +++L+ D+G+YVL+SN YA++ KW + ++R+ MKE V+K+PG S I
Sbjct: 546 HIEYAQLASEKLVQLEQYDAGSYVLMSNMYATNNKWLDTFKLRSSMKERRVRKQPGQSWI 605
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
+ N +H F+ D HP+ +IY +++L + +K GY+ T++V+HDIE+ ++E +L
Sbjct: 606 HLKNVVHRFVALDTSHPRSAEIYAYLEKLMERLKEMGYTSRTDLVVHDIEEEQRETSLKF 665
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LAI +G+IST T +R+ KNLRVC DCH IK I T R+I+VRD RFHHF++
Sbjct: 666 HSEKLAIAFGIISTPVGTALRIFKNLRVCEDCHEAIKFITRATDREIVVRDLYRFHHFKD 725
Query: 480 GTCSCGDYW 488
G CSC D+W
Sbjct: 726 GQCSCEDFW 734
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 157/313 (50%), Gaps = 6/313 (1%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR IHG +L+ G+ + ++++Y KCG+ A + F M + D + ++I +
Sbjct: 145 GRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQ-KDATSWNIVIRACL 203
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ G + A ++F ++D W ++ GL+R+G AL ++M R V + T
Sbjct: 204 QDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSM 263
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE---EMK 178
V + L + +LGR +H + ++ + VG +L++MY +CG+++ AL +F+ +
Sbjct: 264 VFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFT 323
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFE 238
E +++++AG +GR EA+E FR M+ +G+ + V +AC++ G+V+ G +
Sbjct: 324 EDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQ 383
Query: 239 IFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
+ G IVD+ S+ G E+A + + + + ++L + H
Sbjct: 384 V-HGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQ-TKNVALWTTMLCSYASH 441
Query: 299 GKLQLGEQIAKRL 311
G+ ++ +I R+
Sbjct: 442 GQGRMALEIFSRM 454
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 155/384 (40%), Gaps = 105/384 (27%)
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD--NVRPNEVTIVCVL 123
+ NA VF + WT++I G R G A + F EM + PN + VL
Sbjct: 74 LHNAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVL 133
Query: 124 SACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDK-------------- 169
C+ LG +E GR IH ++ + + + ++ A+++MY++CGD +
Sbjct: 134 RCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDAT 193
Query: 170 -----------------ALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG 212
A Q+F+E RDV+++N++++GL HG + EA+ ++M+ G
Sbjct: 194 SWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAG 253
Query: 213 IRPTKVTF------VGVLNACSHG-----------------------------GLVDLGF 237
+ + T+ G+L++ G G ++
Sbjct: 254 VTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESAL 313
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM---KIAPDHIMLGSLLSA 294
IF + D+ + Q + +V + GR EEA +F M + +L S+ SA
Sbjct: 314 SIFDRWS-DFTEDRQFA-WSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASA 371
Query: 295 CKIHGKLQLGEQI---------------AKRLLDC--------------RSADSGTYVLL 325
C G ++ G Q+ A ++D RSA + L
Sbjct: 372 CANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALW 431
Query: 326 SN---AYASSGKWKEAVQIRAKMK 346
+ +YAS G+ + A++I ++MK
Sbjct: 432 TTMLCSYASHGQGRMALEIFSRMK 455
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 35/213 (16%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
+GR++HG V KLG R + +V++Y K G +DA ++F + +V T M+ Y
Sbjct: 380 QGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRS-AQTKNVALWTTMLCSY 438
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG A E+FSR+K + + PNE+T+V
Sbjct: 439 ASHGQGRMALEIFSRMKA-------------------------------EKIMPNEITLV 467
Query: 121 CVLSACSQLGALELGRWIHSYMG-KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMK- 178
VLSACS G + G + M ++ I N ++++Y R G +DKA EE K
Sbjct: 468 AVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKI 527
Query: 179 ERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQ 211
+ + +L++ +H + IE ++ E + Q
Sbjct: 528 SHEAVVWKTLLSACRLH-KHIEYAQLASEKLVQ 559
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 188/537 (35%), Positives = 308/537 (57%), Gaps = 51/537 (9%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN------------- 48
G+ +H +K + L+++Y KCG+ A+++F++M E N
Sbjct: 270 GKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTR 329
Query: 49 ---------------------DVVASTVMINCYVEHGLVENAFEVFSRVKVKDT-----V 82
DVVA T +++ G ++N +V +K + V
Sbjct: 330 DGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFV 389
Query: 83 CWTAMIDGLVRNGEMARALDLFREMQRDNV----------RPNEVTIVCVLSACSQLGAL 132
C A++D + G M A +F M ++ +P+ T+ CVL AC+ L AL
Sbjct: 390 C-NALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSAL 448
Query: 133 ELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGL 192
E G+ IH Y+ ++ + V AL+++Y +CG + A +F+ + +D+ ++ +IAG
Sbjct: 449 ERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGY 508
Query: 193 AMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQ 252
MHG EA+ F EM + GI P +V+F+ +L ACSH GL++ G+ F M D+ IEP+
Sbjct: 509 GMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPK 568
Query: 253 IEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
+EHY C+VDLLSR G +AY+FI + IAPD + G+LL C+ + ++L E++A+R+
Sbjct: 569 LEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVF 628
Query: 313 DCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILG- 371
+ +SG YVLL+N YA + KW+E ++R K+ + G++K PGCS IE+ +++ F+ G
Sbjct: 629 ELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGN 688
Query: 372 DIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLI 431
+ HP + I ++++++ +K EG+ P T+ L + ++ +KE AL HSE+LA+ +GL+
Sbjct: 689 NSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLL 748
Query: 432 STKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
+ P TIRV KNLRVC DCH M K ++ T+R+I++RD NRFHHF++G CSC +W
Sbjct: 749 TLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDPNRFHHFKDGYCSCRGFW 805
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 193/417 (46%), Gaps = 65/417 (15%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN------------ 48
+G+++H + + + + LKLV Y CG+ K+ ++FD M + N
Sbjct: 117 DGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYA 176
Query: 49 ---DVVASTVMINCYVEHGL----VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARAL 101
D S + VE G+ E+AFE+F ++ +D + W +MI G V NG R L
Sbjct: 177 KIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGL 236
Query: 102 DLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMY 161
++++M + + TI+ VL C+ G L LG+ +HS K + L++MY
Sbjct: 237 GIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMY 296
Query: 162 SRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFV 221
S+CGD+D AL+VFE+M ER+V ++ S+IAG GRS A+++ ++M +G++ V
Sbjct: 297 SKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAIT 356
Query: 222 GVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM-- 279
+L+AC+ G +D G ++ + + +E + ++D+ ++ G E A + M
Sbjct: 357 SILHACARSGSLDNGKDVHDYIKAN-NMESNLFVCNALMDMYAKCGSMEAANSVFSTMVV 415
Query: 280 -----------KIAPDHIMLGSLLSACKIHGKLQLGEQI--------------------- 307
++ PD + +L AC L+ G++I
Sbjct: 416 KDIISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVD 475
Query: 308 ----------AKRLLD-CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
A+ L D S D ++ ++ Y G EA+ +M++AG++ +
Sbjct: 476 LYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPD 532
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 119/271 (43%), Gaps = 26/271 (9%)
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
+ A I + G++ A++L ++ + T VL C+ L + G+ +HS +
Sbjct: 69 YNAKILHFCQLGDLENAMELICMCKKSELETK--TYSSVLQLCAGLKSFTDGKKVHSIIK 126
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
+ + ++ +G L++ Y+ CGD+ + +VF+ M++++V +N +++ A G E++
Sbjct: 127 SNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESIC 186
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
+F+ M+ +GI G + FE+F + I G + + L
Sbjct: 187 LFKIMVEKGI---------------EGKRPESAFELFDKLCDRDVISWNSMISGYVSNGL 231
Query: 264 SRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQI----AKRLLDCRSADS 319
+ G Y + + I D + S+L C G L LG+ + K + R S
Sbjct: 232 TERGLG--IYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFS 289
Query: 320 GTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
T L + Y+ G A+++ KM E V
Sbjct: 290 NT---LLDMYSKCGDLDGALRVFEKMGERNV 317
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 193/492 (39%), Positives = 297/492 (60%), Gaps = 9/492 (1%)
Query: 5 IHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPEC----NDVVASTVMINCY 60
HG L+ GLRSN T L L+E G + K A Q+ N ++N Y
Sbjct: 451 FHGMELE-GLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMY 509
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLV--RNGEMARALDLFREMQRDNVRPNEVT 118
G + +A + F ++ K V W+ ++ ++G RA F+EM+ + ++P EVT
Sbjct: 510 ARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVT 569
Query: 119 IVCVLSACSQLGALELGRWIHSYMGKHR-IDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
V L AC+ + LE GR +H ++ + ++G +INMY +CG A VF++M
Sbjct: 570 FVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQM 629
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
E+ + ++NSLI A +G ++EA+ +EM+ QG P T V +L SH GL++ G
Sbjct: 630 PEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGV 689
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFI-TNMKIAPDHIMLGSLLSACK 296
E F+S +D+G+EP C+VDLL+R G + A + I + D I +LL+ACK
Sbjct: 690 EHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLAACK 749
Query: 297 IHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGC 356
+G Q G + A+R+ + SG++V+L+N YAS G+W +A +IR M+ V+KEPGC
Sbjct: 750 SYGDPQRGIRCAERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKMMERMSVKKEPGC 809
Query: 357 SSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWA 416
S IE++ +HEFI G+ +HP+ +I + +++L ++ GY P T V+HD+E+ +KE
Sbjct: 810 SWIELSGSVHEFISGESKHPKIREICEDLEKLTLRMREAGYVPDTTNVVHDVEEGDKEEI 869
Query: 417 LAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHH 476
L+ HSERLAI +GL+ST+P TIRVVKNLRVC+DCH+ K+I+++ R+I+VRD +RFHH
Sbjct: 870 LSRHSERLAIVFGLMSTRPGETIRVVKNLRVCSDCHAATKIISSVVGREIVVRDSSRFHH 929
Query: 477 FENGTCSCGDYW 488
F++G CSCGD+W
Sbjct: 930 FKHGQCSCGDFW 941
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 152/294 (51%), Gaps = 8/294 (2%)
Query: 66 VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSA 125
V +A VF + K+ WT M+ +NG AL+LF MQ + RP++V V L A
Sbjct: 8 VTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVVFVIALDA 67
Query: 126 CSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTY 185
C+ G L+ GR IHS + + N I+ +L+NMY +C D+ A +VF+ M RDV ++
Sbjct: 68 CAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSW 127
Query: 186 NSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR 245
+++A A +G +A+E M +G++P +VTFV +++ C+ L+DLG +I +
Sbjct: 128 TAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIIN 187
Query: 246 DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGE 305
+ G+EP +V + G ++ + M ++ ++++ C +G+ + G
Sbjct: 188 E-GLEPDGILGNALVHMYGSCGSFDDMKSVFSRMG-QSSVLLWTTMIAGCSQNGQYEEGL 245
Query: 306 QIAKRL-LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSS 358
+ +++ L+ A+ TY+ + + KE I A++ E+ P CSS
Sbjct: 246 LVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILES-----PFCSS 294
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 171/363 (47%), Gaps = 43/363 (11%)
Query: 1 EGREIHGQVLKLGL-RSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINC 59
+GREIH +VL GL + + ++ +YGKCG+
Sbjct: 379 QGREIHARVLLCGLLQREVAVGNSVITMYGKCGQ-------------------------- 412
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
E A VF + KD V W A+I+ V N + AL+LF M+ + +R NE T+
Sbjct: 413 ------TEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTL 466
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHI-VGGALINMYSRCGDIDKALQVFEEMK 178
+ +L AC L L+L R IH+ N VG +++NMY+RCG + A + F+ ++
Sbjct: 467 LSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLE 526
Query: 179 ERDVTTYNSLIAGLAMH--GRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
E+ + ++ ++A A G A + F+EM +GI+P +VTFV L+AC+ ++ G
Sbjct: 527 EKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHG 586
Query: 237 FEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLG--SLLSA 294
+ + +E + I+++ + G P +A M P+ ++ SL+ A
Sbjct: 587 RSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQM---PEKCLISWNSLIVA 643
Query: 295 CKIHG-KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQ-IRAKMKEAGVQK 352
+G L+ + + LL DSGT V + + +G + V+ R+ +++ G++
Sbjct: 644 YAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEP 703
Query: 353 EPG 355
G
Sbjct: 704 SSG 706
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 168/354 (47%), Gaps = 36/354 (10%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+IH V+ GL SN LV +YGKC +
Sbjct: 77 GRQIHSSVVGSGLTSNIIISNSLVNMYGKCQD---------------------------- 108
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
V A +VF + ++D V WTAM+ +NG ++AL+ M + V+PN+VT V
Sbjct: 109 ----VPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVT 164
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
++ C++L L+LGR IH + ++ + I+G AL++MY CG D VF M +
Sbjct: 165 IVDVCAKLRLLDLGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSS 224
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V + ++IAG + +G+ E + +FR+M +G++ +VT++ ++ C + V G E+
Sbjct: 225 VLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEG-EMID 283
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+ + ++ L + G + A + +M D + ++++AC +G
Sbjct: 284 ARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHM-YQRDVVAWNAMVTACAQNGDN 342
Query: 302 QLGEQIAKRL-LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAG-VQKE 353
+ +R+ ++ A+ TY+ + A A+ + +I A++ G +Q+E
Sbjct: 343 WEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQRE 396
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 125/234 (53%), Gaps = 20/234 (8%)
Query: 13 GLRSNRSTRLKLVEL-----YGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEHGLVE 67
G+++N T + +VE+ K GE DA L E P C+ + +T +I+ Y + G+++
Sbjct: 255 GVKANEVTYMSMVEVCRNLDAVKEGEMIDARIL--ESPFCSSTLLATSLISLYGQCGILD 312
Query: 68 NAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACS 127
A + + +D V W AM+ +NG+ A+ L R M + N+VT + VL AC+
Sbjct: 313 RAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACA 372
Query: 128 QLGALELGRWIHSYMGKHRIDLNHI------VGGALINMYSRCGDIDKALQVFEEMKERD 181
L AL GR IH+ R+ L + VG ++I MY +CG + A+ VFE M +D
Sbjct: 373 NLEALSQGREIHA-----RVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKD 427
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
++N++I + + +A+E+F M +G+R + T + +L AC GGL DL
Sbjct: 428 DVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEAC--GGLEDL 479
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 143/301 (47%), Gaps = 33/301 (10%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+IH +++ GL + LV +YG CG F D +F M + S+V++
Sbjct: 178 GRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQ------SSVLL---- 227
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
WT MI G +NG+ L +FR+M + V+ NEVT +
Sbjct: 228 ----------------------WTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMS 265
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
++ C L A++ G I + + + + ++ +LI++Y +CG +D+A + E M +RD
Sbjct: 266 MVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRD 325
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V +N+++ A +G + EA+ + R M +G KVT++ VL AC++ + G EI
Sbjct: 326 VVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHA 385
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
+ ++ ++ ++ + + G+ E A M D + ++++A + K
Sbjct: 386 RVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMP-RKDDVSWNAVINASVGNSKF 444
Query: 302 Q 302
Q
Sbjct: 445 Q 445
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 50/84 (59%)
Query: 160 MYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVT 219
MY +C + AL VF+ + ++V ++ ++A + +G EA+E+F M +G RP KV
Sbjct: 1 MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60
Query: 220 FVGVLNACSHGGLVDLGFEIFQSM 243
FV L+AC+ G +D G +I S+
Sbjct: 61 FVIALDACAASGELDHGRQIHSSV 84
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 186/491 (37%), Positives = 285/491 (58%), Gaps = 5/491 (1%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN---DVVASTVMI 57
E + ++L LG + N T L++ G QL + +V + ++
Sbjct: 189 EALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLL 248
Query: 58 NCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV 117
+ Y + A +F+ + K+ V W A+I G R GE + LF +M R P
Sbjct: 249 DMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHF 308
Query: 118 TIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
T VL AC+ G+LE G+W+H+++ K +G LI+MY++ G I A +VF +
Sbjct: 309 TYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRL 367
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
++D+ ++NS+I+G A HG EA+++F +M+ ++P ++TF+ VL ACSH GL+D G
Sbjct: 368 VKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQ 427
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F+ M + + IE Q+ H+ +VDLL R GR EA FI M I P + G+LL AC++
Sbjct: 428 YYFELM-KKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRM 486
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
H + LG A+++ + DSG +VLLSN YAS+G+ +A ++R MKE+GV+KEP CS
Sbjct: 487 HKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACS 546
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
+E+ NE+H F+ D HP RE+I + +++ +K GY P T VL + ++E L
Sbjct: 547 WVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKL 606
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
HSE+LA+ + ++ T P TIR+ KN+R+C DCHS K + + R+IIVRD NRFHHF
Sbjct: 607 QYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHF 666
Query: 478 ENGTCSCGDYW 488
+G CSC DYW
Sbjct: 667 LHGMCSCRDYW 677
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 141/266 (53%), Gaps = 7/266 (2%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+D+V ++N Y + G +E A ++F ++ KD V WT +I G ++G+ + AL LF +M
Sbjct: 138 DDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKM 197
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+PNE T+ +L A + GR +H++ K+ D+N VG +L++MY+R +
Sbjct: 198 LHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHM 257
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+A +F + ++V ++N+LIAG A G + +F +M+ QG PT T+ VL AC
Sbjct: 258 REAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-AC 316
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
+ G ++ G + + + G +P ++D+ ++ G ++A + + D +
Sbjct: 317 ASSGSLEQGKWVHAHVIKSGG-QPIAYIGNTLIDMYAKSGSIKDAKKVFRRL-VKQDIVS 374
Query: 288 LGSLLSACKIHG----KLQLGEQIAK 309
S++S HG LQL EQ+ K
Sbjct: 375 WNSIISGYAQHGLGAEALQLFEQMLK 400
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 122/244 (50%), Gaps = 8/244 (3%)
Query: 111 NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKA 170
++ P +L+ C+ L L+ GR IH+++ + + ++ ++NMY++CG +++A
Sbjct: 100 SLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEA 159
Query: 171 LQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHG 230
+F++M +D+ ++ LI+G + G++ EA+ +F +M++ G +P + T +L A G
Sbjct: 160 QDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTG 219
Query: 231 GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGS 290
G ++ + + YG + + ++D+ +R EA I N A + + +
Sbjct: 220 PSDHHGRQL-HAFSLKYGYDMNVHVGSSLLDMYARWAHMREA-KVIFNSLAAKNVVSWNA 277
Query: 291 LLSACKIHGKLQLGEQIAKRLLD-CRSADSGTYVLLSN--AYASSGKWKEAVQIRAKMKE 347
L++ H + GE + + R T+ S+ A ASSG ++ + A + +
Sbjct: 278 LIAG---HARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLACASSGSLEQGKWVHAHVIK 334
Query: 348 AGVQ 351
+G Q
Sbjct: 335 SGGQ 338
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 367 bits (942), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 183/487 (37%), Positives = 278/487 (57%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G++IH +K+G S+ L++ Y KC + ++++F + + N+
Sbjct: 383 GKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANE------------ 430
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
V W ++ G ++G AL +F EMQ + +VT
Sbjct: 431 --------------------VSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSS 470
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL AC+ ++ IH + K + + ++G +LI+ Y++CG I AL+VF+ + ERD
Sbjct: 471 VLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERD 530
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++N++I+G A+HG++ +A+E+F M + +TFV +L+ CS GLV+ G +F
Sbjct: 531 IISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFD 590
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM D+GI+P +EHY CIV LL R GR +A FI ++ AP ++ +LLS+C IH +
Sbjct: 591 SMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNV 650
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
LG A+++L+ D TYVLLSN YA++G + +R M+ GV+K PG S +E+
Sbjct: 651 ALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEI 710
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
EIH F +G + HP I ++ L EGY P VVLHD++ +K L +HS
Sbjct: 711 KGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHS 770
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ERLA+ YGL+ T P IR++KNLR C DCH+ +I+ I KR+IIVRD NRFHHFE+G
Sbjct: 771 ERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGK 830
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 831 CSCGDYW 837
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 171/352 (48%), Gaps = 47/352 (13%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ IHG +K + L+++Y KCG+ KDA F+ +P +DV+ + MI+ Y
Sbjct: 282 GKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPY-DDVILLSFMISRYA 340
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+ E AFE LF + R +V PNE ++
Sbjct: 341 QSNQNEQAFE-------------------------------LFLRLMRSSVLPNEYSLSS 369
Query: 122 VLSACSQLGALELGRWIHSYMGK--HRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
VL AC+ + L+ G+ IH++ K H DL VG AL++ Y++C D+D +L++F +++
Sbjct: 370 VLQACTNMVQLDFGKQIHNHAIKIGHESDL--FVGNALMDFYAKCNDMDSSLKIFSSLRD 427
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+ ++N+++ G + G EA+ +F EM + T+VT+ VL AC+ + +I
Sbjct: 428 ANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQI 487
Query: 240 FQSMTRD-YGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIH 298
S+ + + + I + ++D ++ G +A ++ + D I +++S +H
Sbjct: 488 HCSIEKSTFNNDTVIGN--SLIDTYAKCGYIRDALKVFQHL-MERDIISWNAIISGYALH 544
Query: 299 GK----LQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
G+ L+L +++ K ++ ++ T+V L + +S+G + + M+
Sbjct: 545 GQAADALELFDRMNKSNVE---SNDITFVALLSVCSSTGLVNHGLSLFDSMR 593
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 140/302 (46%), Gaps = 9/302 (2%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+I+ Y LV +A VF+ + KD V WTAM+ N A +F +M+ +PN
Sbjct: 203 LIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPN 262
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
+ VL A L ++ LG+ IH K D VGGAL++MY++CGDI A FE
Sbjct: 263 PFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFE 322
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
+ DV + +I+ A ++ +A E+F ++ + P + + VL AC++ +D
Sbjct: 323 MIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDF 382
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSAC 295
G +I + G E + ++D ++ + + ++++ A + + +++
Sbjct: 383 GKQIHNHAIK-IGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDA-NEVSWNTIVVGF 440
Query: 296 KIHGKLQLGEQIAKRLLDCRSADSG----TYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
G LGE+ + ++A TY + A AS+ + A QI ++++
Sbjct: 441 SQSG---LGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFN 497
Query: 352 KE 353
+
Sbjct: 498 ND 499
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 144/386 (37%), Gaps = 74/386 (19%)
Query: 2 GREIHGQVLKLGL--RSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINC 59
GR +HG V++ G R + L+ +YGK G A +LFD MPE N
Sbjct: 78 GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERN----------- 126
Query: 60 YVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTI 119
V + ++ + G+ A LFR ++ + N+ +
Sbjct: 127 ---------------------MVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVL 165
Query: 120 VCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+L + A L +HS K D N VG LI+ YS C + A VF +
Sbjct: 166 TTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVR 225
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+D + ++++ + + A +F +M G +P VL A V LG I
Sbjct: 226 KDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGI 285
Query: 240 FQSMTRDYG-IEPQIEHYGCIVDLLSRVG------------------------------- 267
+ EP + G ++D+ ++ G
Sbjct: 286 HGCAIKTLNDTEPHVG--GALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSN 343
Query: 268 RPEEAYDFITNM---KIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYV- 323
+ E+A++ + + P+ L S+L AC +L G+QI + +S +V
Sbjct: 344 QNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKI-GHESDLFVG 402
Query: 324 -LLSNAYASSGKWKEAVQIRAKMKEA 348
L + YA +++I + +++A
Sbjct: 403 NALMDFYAKCNDMDSSLKIFSSLRDA 428
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 105/273 (38%), Gaps = 58/273 (21%)
Query: 114 PNEVTIVCV--LSACSQLGALELGRWIHSYM----GKHRIDLNHIVGGALINMYSRCGDI 167
P + C L C G GR +H ++ G R+DL L+NMY + G +
Sbjct: 55 PGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDL--FCANVLLNMYGKLGPL 112
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM------INQGIRPTKV--- 218
A ++F+ M ER++ ++ +L+ A G A +FR + +NQ + T +
Sbjct: 113 ASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLA 172
Query: 219 ------------------------TFV--GVLNACSHGGLVDLGFEIFQSMTRDYGIEPQ 252
FV G+++A S LV +F + R +
Sbjct: 173 IAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVV-- 230
Query: 253 IEHYGCIVDLLSRVGRPEEAYDFITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQI-- 307
+ +V S PE A+ + M+++ P+ L S+L A + LG+ I
Sbjct: 231 ---WTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHG 287
Query: 308 --AKRLLDCRSADSGTYVLLSNAYASSGKWKEA 338
K L D G L + YA G K+A
Sbjct: 288 CAIKTLNDTEPHVGGA---LLDMYAKCGDIKDA 317
>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
Length = 713
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 187/446 (41%), Positives = 288/446 (64%), Gaps = 6/446 (1%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+ VVA T ++N Y + G V++A V + V+ +V WTAMI +NG A A++LF+ M
Sbjct: 269 STVVAGT-LVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCM 327
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYM-GKHRIDLNHIVGGALINMYSRCGD 166
+ P+++T++ V+ +C+ LG L LG+ IH+ + + ++ A+I MY +CG+
Sbjct: 328 DLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGN 387
Query: 167 IDKALQVFE--EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREM-INQGIRPTKVTFVGV 223
++ A +VFE ++ R V T+ ++I A +G EA+E+F+EM I+ G P +VTF+ V
Sbjct: 388 LELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSV 447
Query: 224 LNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK-IA 282
L ACSH G ++ +E F SM D+G+ P +HY C+VDLL R GR EA + K
Sbjct: 448 LCACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFE 507
Query: 283 PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIR 342
D + + LSAC+++G L+ ++ AKR+ + + VLLSN YA+ G+ + +IR
Sbjct: 508 ADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIR 567
Query: 343 AKMKEAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTE 402
+MK +GV+K G S IE+NN +HEF++ D+ HP++ +IY +++ L + +K GY P T+
Sbjct: 568 NEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYSELERLHREIKEAGYVPDTK 627
Query: 403 VVLHDIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANIT 462
+VL D+++ +K L HSERLA+ G+IST P TT+RVVKNLRVC+DCH+ K I+ I
Sbjct: 628 MVLRDVDEEKKVQLLGYHSERLAMALGIISTPPGTTLRVVKNLRVCSDCHAATKFISQIV 687
Query: 463 KRKIIVRDRNRFHHFENGTCSCGDYW 488
R+IIVRD +RFHHF++G CSCGDYW
Sbjct: 688 GRQIIVRDTSRFHHFKDGVCSCGDYW 713
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 137/305 (44%), Gaps = 37/305 (12%)
Query: 55 VMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRP 114
V+++ Y +HG + A F R+ + + W ++ +NG A LF M VRP
Sbjct: 72 VLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGVRP 131
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
N VT+ L AC+ L LGR ++ + ++++ V +LI MY RC +I++A + F
Sbjct: 132 NAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVESSLITMYGRCREIEEAERAF 191
Query: 175 EEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVD 234
+ E+DV + ++I+ A + R+ A+E+ R M +GI+ T+V +L+AC+ +
Sbjct: 192 DRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLR 251
Query: 235 LGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKI------------- 281
G Q G +V+L + GR ++A + M +
Sbjct: 252 NGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAY 311
Query: 282 ---------------------APDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG 320
P I L S++ +C + G L LG++I R+ RS+ S
Sbjct: 312 AQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARI---RSSPSF 368
Query: 321 TYVLL 325
+ L+
Sbjct: 369 SQSLM 373
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 120/272 (44%), Gaps = 33/272 (12%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+++ + L + L+ +YG+C E ++A + FD PE DVV T MI+ Y
Sbjct: 152 GRKLNELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPE-KDVVCWTAMISAYA 210
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
N +RAL+L R M + ++ T V
Sbjct: 211 H-------------------------------NWRTSRALELVRRMDLEGIKLGLPTYVS 239
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNH-IVGGALINMYSRCGDIDKALQVFEEMKER 180
+L AC+ L G H +D + +V G L+N+Y +CG +D A +V + M R
Sbjct: 240 LLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVR 299
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
++ ++IA A +G + EA+ +F+ M +G P+ +T + V+++C+ G + LG I
Sbjct: 300 TSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIH 359
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
+ + ++ + + G E A
Sbjct: 360 ARIRSSPSFSQSLMLLNAVITMYGKCGNLELA 391
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 103/229 (44%), Gaps = 9/229 (3%)
Query: 128 QLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNS 187
Q L+ R +H+ + ++D N +G L++ YS+ G + A F + + ++N
Sbjct: 44 QCRGLDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNI 103
Query: 188 LIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRD- 246
L+A A +G A +F M +QG+RP VT L AC+ + LG ++ + + +
Sbjct: 104 LMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEA 163
Query: 247 YGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAP--DHIMLGSLLSACKIHGKLQLG 304
I+ +E L++ GR E + +P D + +++SA + +
Sbjct: 164 LEIDSHVES-----SLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRA 218
Query: 305 EQIAKRL-LDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQK 352
++ +R+ L+ TYV L +A AS+ + V + G+ +
Sbjct: 219 LELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDR 267
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 187/489 (38%), Positives = 289/489 (59%), Gaps = 34/489 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+IH ++KL + L+++Y K G+ +A +F+ +PE
Sbjct: 384 GRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPE--------------- 428
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+D V TA+I G + G AL+LFR +Q + ++ N VT
Sbjct: 429 -----------------RDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTG 471
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL+A S L AL+LG+ +H+++ + I ++ +LI+MYS+CG++ + ++F+ M ER
Sbjct: 472 VLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERT 531
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSHGGLVDLGFEIF 240
V ++N+++ G + HG E +++F M + ++P VT + VL+ CSHGGL D G IF
Sbjct: 532 VISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIF 591
Query: 241 QSMTR-DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
M+ +EP++EHYGC+VDLL R GR EEA++FI M P + GSLL AC++H
Sbjct: 592 NDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHS 651
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
+ +GE ++LL+ ++G YV+LSN YAS+G+W++ +R M + V KEPG SSI
Sbjct: 652 NVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSI 711
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
E++ +H F D HP+RE+I K++EL K GY P VLHD+++ +KE L
Sbjct: 712 ELDQVLHTFHASDRSHPRREEICMKVKELSTSFKEVGYVPDLSCVLHDVDEEQKEKILLG 771
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LA+ +GLI++ IRV+KNLR+C DCH+ K I+ + R++ +RD+NRFH
Sbjct: 772 HSEKLALSFGLIASPASVPIRVIKNLRICVDCHNFAKYISKVYGREVSLRDKNRFHRIVG 831
Query: 480 GTCSCGDYW 488
G CSC DYW
Sbjct: 832 GKCSCEDYW 840
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 137/272 (50%), Gaps = 22/272 (8%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+ +H ++K + R +L+ LY KC DA +FDEMPE N VV+ T MI+ Y
Sbjct: 261 EGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERN-VVSWTAMISAY 319
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDN-----VRPN 115
+ G A +F VK ++ ID L ++ N PN
Sbjct: 320 SQRGYASQALNLFF-ADVKISLTGVYAIDKL--------------KLSNPNRPWVCTEPN 364
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFE 175
E T VL++C+ LGR IHS + K + + VG +L++MY++ G I +A VFE
Sbjct: 365 EFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFE 424
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
+ ERDV + ++I+G A G EA+E+FR + +G++ VT+ GVL A S +DL
Sbjct: 425 CLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDL 484
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG 267
G ++ + R I + ++D+ S+ G
Sbjct: 485 GKQVHNHVLRS-EIPSFVVLQNSLIDMYSKCG 515
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 119/287 (41%), Gaps = 61/287 (21%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+ C A G+ +H++M K R + + LI +Y++C + A VF+EM ER+
Sbjct: 249 ILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERN 308
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGI---------------------RPTKVTF 220
V ++ ++I+ + G + +A+ +F + + P + TF
Sbjct: 309 VVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTF 368
Query: 221 VGVLNACS-----------HGGLVDLGFE--------IFQSMTRDYGIE---------PQ 252
VL +C+ H ++ L +E + +D I P+
Sbjct: 369 ATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPE 428
Query: 253 IEHYGC--IVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIHGKLQLGEQI 307
+ C I+ +++G EEA + ++ + +++ +L+A L LG+Q+
Sbjct: 429 RDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQV 488
Query: 308 AKRLLDCRSADSGTYVLLSNA----YASSGKWKEAVQIRAKMKEAGV 350
+L ++ ++V+L N+ Y+ G + +I M E V
Sbjct: 489 HNHVL---RSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTV 532
>gi|224065074|ref|XP_002301657.1| predicted protein [Populus trichocarpa]
gi|222843383|gb|EEE80930.1| predicted protein [Populus trichocarpa]
Length = 504
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 184/488 (37%), Positives = 290/488 (59%), Gaps = 33/488 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +H QV+K ++ L+ LY +C F + +++FD+MPE N VAS
Sbjct: 49 GRGVHAQVVKSSEGPDQVVNNGLLRLYTQCECFNEVLKVFDQMPERN--VAS-------- 98
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
W ++I G V+ ++ ALD+FR MQR+ + + VT+
Sbjct: 99 ----------------------WNSLISGFVKEDKLGEALDVFRRMQREGMGFSWVTLTT 136
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L C+++ AL G+ IH+ + K + +V +L++MY +CG +D ++F+ M+ +D
Sbjct: 137 ILPICARVTALLSGKEIHAQIVKSARRPDVLVLNSLVDMYVKCGVVDYGRRLFDGMRSKD 196
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+T++N+++ G A++G A+++F EM + GIRP VTF+ +L+ CSH GL + G ++F
Sbjct: 197 LTSWNTMLTGYAINGYMRVAMDLFNEMASCGIRPDDVTFIALLSGCSHAGLTEDGQKLFH 256
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M D+G+ P +EHY C+VD+L R GR + A + NM + + GSLL++C++H ++
Sbjct: 257 RMEMDFGVSPSLEHYACLVDMLGRAGRIDAALVVVKNMPMKTSGSIWGSLLNSCRLHNEV 316
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
L E IA RL + + G YV+LSN YA++G W +R M+ ++KE GCS I+V
Sbjct: 317 PLAEAIANRLFELEPYNPGNYVMLSNIYANAGMWDSVNMVREMMQTRRIRKEAGCSWIQV 376
Query: 362 NNEIHEFILGDIRHPQREQIYKKM-QELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIH 420
N+IH F+ G + YKK+ +L++ ++ GY P+T+VVLHD+ + K + H
Sbjct: 377 KNKIHSFVAGGGFEFRNSDEYKKIWNKLREAMEEFGYIPNTDVVLHDVNEETKAMWVCGH 436
Query: 421 SERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENG 480
SERLA + LI T IR+ KNLRVC DCHS IK+++ +T R I++RD NRFHHF+ G
Sbjct: 437 SERLATVFSLIHTAAGMPIRITKNLRVCVDCHSWIKIVSRVTGRVIVLRDTNRFHHFKEG 496
Query: 481 TCSCGDYW 488
CSC DYW
Sbjct: 497 ACSCNDYW 504
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 156/360 (43%), Gaps = 55/360 (15%)
Query: 87 MIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHR 146
M G +NG + AL ++ EM + + P L AC+ L L +GR +H+ + K
Sbjct: 1 MAIGYSKNGFLREALLVYVEMLWNCMEPGNFAFSTALKACADLRELWVGRGVHAQVVKSS 60
Query: 147 IDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
+ +V L+ +Y++C ++ L+VF++M ER+V ++NSLI+G + EA+++FR
Sbjct: 61 EGPDQVVNNGLLRLYTQCECFNEVLKVFDQMPERNVASWNSLISGFVKEDKLGEALDVFR 120
Query: 207 EMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRV 266
M +G+ + VT +L C+ + G EI + + P + +VD+ +
Sbjct: 121 RMQREGMGFSWVTLTTILPICARVTALLSGKEIHAQIVKS-ARRPDVLVLNSLVDMYVKC 179
Query: 267 G------------RPEE-------------------AYDFITNMK---IAPDHIMLGSLL 292
G R ++ A D M I PD + +LL
Sbjct: 180 GVVDYGRRLFDGMRSKDLTSWNTMLTGYAINGYMRVAMDLFNEMASCGIRPDDVTFIALL 239
Query: 293 SACKIHGKLQLGEQIAKRL-LDCRSADS-GTYVLLSNAYASSGKWKEAVQI--RAKMKEA 348
S C G + G+++ R+ +D + S Y L + +G+ A+ + MK +
Sbjct: 240 SGCSHAGLTEDGQKLFHRMEMDFGVSPSLEHYACLVDMLGRAGRIDAALVVVKNMPMKTS 299
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDI 408
G +S ++NE+ P E I ++ E LE Y+P V+L +I
Sbjct: 300 GSIWGSLLNSCRLHNEV----------PLAEAIANRLFE------LEPYNPGNYVMLSNI 343
>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
Length = 645
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 183/442 (41%), Positives = 274/442 (61%), Gaps = 1/442 (0%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
DV T +I+ Y + G ++ A+ VF+ ++D W +MI +NG A AL L R M
Sbjct: 204 TDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAACGQNGRPAEALTLCRNM 263
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ + P T+V +SA + AL GR +H Y + + +L++MY++ G +
Sbjct: 264 AAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWV 323
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNA 226
A +FE++ R++ ++N++I G MHG + A E+F M ++ + P +TFVGVL+A
Sbjct: 324 MVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFSRMRSEAQVMPDHITFVGVLSA 383
Query: 227 CSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHI 286
C+HGG+V E+F M Y I+P ++HY C+VD+L GR +EA D I M + PD
Sbjct: 384 CNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSG 443
Query: 287 MLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
+ G+LL+ CKIH ++L E ++L++ D+G YVLLSN YA SGKW+EA ++R M
Sbjct: 444 IWGALLNGCKIHKNVELAELALQKLIELEPEDAGNYVLLSNIYAESGKWEEAARVRKLMT 503
Query: 347 EAGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLH 406
G++K CS IE+ + H F++GD HP+ + IY++++ L+ ++ GY P T V H
Sbjct: 504 NRGLKKIIACSWIELKGKFHGFLVGDASHPRSDDIYEELERLEGLISQTGYVPDTTPVFH 563
Query: 407 DIEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKI 466
++ED EK + HSERLAI +GLIST P T + V KNLRVC DCH +IKLI+ I +R+I
Sbjct: 564 NVEDDEKRNMVWGHSERLAIAFGLISTPPRTKLLVTKNLRVCEDCHVVIKLISQIEQREI 623
Query: 467 IVRDRNRFHHFENGTCSCGDYW 488
I+RD NR+HHF NG CSC D+W
Sbjct: 624 IIRDVNRYHHFVNGECSCKDHW 645
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 95/190 (50%), Gaps = 8/190 (4%)
Query: 115 NEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVF 174
N +L +C A+ GR +H+ + L+ ++ L+++Y+ CG + A +VF
Sbjct: 67 NHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVF 126
Query: 175 EEMKER-DVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACSHGGL 232
+EM + +V +N LI A G A+E++R M+ G ++P T+ VL AC+ L
Sbjct: 127 DEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACA--AL 184
Query: 233 VDL--GFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGS 290
+DL G E+ + R G ++D+ ++ G +EA+ + I D + S
Sbjct: 185 LDLSAGREVHDRVMRTNWATDVFVCTG-LIDMYAKCGCMDEAWAVFNDTTIR-DAAVWNS 242
Query: 291 LLSACKIHGK 300
+++AC +G+
Sbjct: 243 MIAACGQNGR 252
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 100/222 (45%), Gaps = 13/222 (5%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GRE+HG + G S + L+++Y K G A LF+++ ++++ MI +
Sbjct: 291 GRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLH-RELISWNAMICGFG 349
Query: 62 EHGLVENAFEVFSRVK-----VKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPN 115
HG ++AFE+FSR++ + D + + ++ G + A ++F M +++P
Sbjct: 350 MHGHADHAFELFSRMRSEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPT 409
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALIN---MYSRCGDIDKALQ 172
C++ G + + M + + + GAL+N ++ + ALQ
Sbjct: 410 VQHYTCLVDVLGHSGRFKEASDVIKGM---LVKPDSGIWGALLNGCKIHKNVELAELALQ 466
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIR 214
E++ D Y L A G+ EA + + M N+G++
Sbjct: 467 KLIELEPEDAGNYVLLSNIYAESGKWEEAARVRKLMTNRGLK 508
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 180/441 (40%), Positives = 262/441 (59%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
+ + + +I+ Y + + A VF R+K K+ V WTAM+ G + G A+ +F +M
Sbjct: 303 DHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDM 362
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
QR + P+ T+ +SAC+ + +LE G H + V +L+ +Y +CGDI
Sbjct: 363 QRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDI 422
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
D + ++F EM RD ++ ++++ A GR++E +++F +M+ G++P VT GV++AC
Sbjct: 423 DDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISAC 482
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
S GLV+ G F+ MT +YGI P I HY C++DL SR GR EEA FI M PD I
Sbjct: 483 SRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIG 542
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+LLSAC+ G L++G+ A+ L++ Y LLS+ YAS GKW Q+R M+E
Sbjct: 543 WTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMRE 602
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
V+KEPG S I+ ++H F D P +QIY K++EL + GY P T V HD
Sbjct: 603 KNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHD 662
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
+E+ K L HSERLAI +GLI IRV KNLRVC DCH+ K I+++T R+I+
Sbjct: 663 VEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREIL 722
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
VRD RFH F++GTCSCGD+W
Sbjct: 723 VRDAVRFHRFKDGTCSCGDFW 743
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 185/375 (49%), Gaps = 37/375 (9%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G++IHGQV+KLG S L+ +Y G DA ++F + + N V+ +++M +
Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLM-GGLL 216
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G++E+A ++F R KD+V W AMI GL +NG A++ FREM+ ++ ++
Sbjct: 217 ACGMIEDALQLF-RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGS 275
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL AC LGA+ G+ IH+ + + + VG ALI+MY +C + A VF+ MK+++
Sbjct: 276 VLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKN 335
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS-----------HG 230
V ++ +++ G GR+ EAV++F +M GI P T ++AC+ HG
Sbjct: 336 VVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHG 395
Query: 231 GLVDLGF----EIFQSMTRDYGIEPQIE---------------HYGCIVDLLSRVGRPEE 271
+ G + S+ YG I+ + +V ++ GR E
Sbjct: 396 KAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVE 455
Query: 272 A---YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRS--ADSGTYVLLS 326
+D + + PD + L ++SAC G ++ G++ K + G Y +
Sbjct: 456 TIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMI 515
Query: 327 NAYASSGKWKEAVQI 341
+ ++ SG+ +EA++
Sbjct: 516 DLFSRSGRLEEAMRF 530
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/447 (23%), Positives = 174/447 (38%), Gaps = 97/447 (21%)
Query: 3 REIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVE 62
+ IHG +++ +V Y A ++FD +P+ N + +++ Y +
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLL-AYSK 84
Query: 63 HGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTIVC 121
GL+ F ++ +D V W +I+G +G + A+ + M RD + VT++
Sbjct: 85 AGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMT 144
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L S G + LG+ IH + K + +VG L+ MY+ G I A +VF + +R+
Sbjct: 145 MLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRN 204
Query: 182 VTTYNSL------------------------------IAGLAMHGRSIEAVEMFREMINQ 211
YNSL I GLA +G + EA+E FREM Q
Sbjct: 205 TVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQ 264
Query: 212 GIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTR-------------------------- 245
G++ + F VL AC G ++ G +I + R
Sbjct: 265 GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYA 324
Query: 246 ----DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGSLLSACKIH 298
D + + + +V + GR EEA +M+ I PDH LG +SAC
Sbjct: 325 KTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANV 384
Query: 299 GKLQLGEQIAKRLL-------------------DCRSADSGT-------------YVLLS 326
L+ G Q + + C D T + +
Sbjct: 385 SSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMV 444
Query: 327 NAYASSGKWKEAVQIRAKMKEAGVQKE 353
+AYA G+ E +Q+ KM + G++ +
Sbjct: 445 SAYAQFGRAVETIQLFDKMVQHGLKPD 471
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 41/220 (18%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG + HG+ + GL + LV LYGKCG+ D+ +LF+EM D V+ T M++ Y
Sbjct: 389 EGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM-NVRDAVSWTAMVSAY 447
Query: 61 VEHGLVENAFEVFSRVKV----KDTVCWTAMID-----GLVRNGEMARAL---------- 101
+ G ++F ++ D V T +I GLV G+ L
Sbjct: 448 AQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPS 507
Query: 102 --------DLFREMQR--DNVR--------PNEVTIVCVLSACSQLGALELGRWIHSYMG 143
DLF R + +R P+ + +LSAC G LE+G+W +
Sbjct: 508 IGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESL- 566
Query: 144 KHRIDLNHIVGGALI-NMYSRCGDIDKALQVFEEMKERDV 182
+D +H G L+ ++Y+ G D Q+ M+E++V
Sbjct: 567 -IELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNV 605
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 187/489 (38%), Positives = 283/489 (57%), Gaps = 34/489 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G ++HG V + G ++ S L++ YGKC + + + +F EM
Sbjct: 228 GMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEM----------------- 270
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+K+ V W +++ V+N E +A L+ +++ V ++ I
Sbjct: 271 ---------------GMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISS 315
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VLSAC+ + LELGR IH++ K ++ N VG AL++MY +CG I+ + Q F+EM E++
Sbjct: 316 VLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKN 375
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTK--VTFVGVLNACSHGGLVDLGFEI 239
+ T NSLI G A G+ A+ +F +M +G P +TFV +L+ACS G V+ G +I
Sbjct: 376 LVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKI 435
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F SM YGIEP EHY CIVD+L R G E+A++FI M I P + G+L +AC++HG
Sbjct: 436 FDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHG 495
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
K LG A+ L DSG +VLLSN +A++G+W EA +R +MK G++K G S I
Sbjct: 496 KPHLGILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGVGIKKGAGYSWI 555
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAI 419
V N++H F D H ++I + +L+ ++ GY P ++ L+D+E+ EK ++
Sbjct: 556 TVKNQVHAFQAKDRSHKMNKEIQTMLTKLRNKMEAAGYKPDLKLSLYDLEEEEKAAEVSH 615
Query: 420 HSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFEN 479
HSE+LA+ +GL++ IR+ KNLR+C DCHS K ++ KR+IIVRD NRFH F++
Sbjct: 616 HSEKLALAFGLVALPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKD 675
Query: 480 GTCSCGDYW 488
G CSC DYW
Sbjct: 676 GICSCKDYW 684
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 113/213 (53%), Gaps = 1/213 (0%)
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
+ +IN Y + E+A V ++ V WT+++ GL +NG + AL F EM+R+ V
Sbjct: 45 ANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGV 104
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
PN+ T CV A + L G+ IH+ K L+ VG + +MY + D A +
Sbjct: 105 APNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARK 164
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
+F+E+ ER++ T+N+ I+ GR EA+E F E G +P +TF G LNACS G L
Sbjct: 165 LFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLL 224
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSR 265
+DLG ++ + R G + + Y ++D +
Sbjct: 225 LDLGMQMHGLVFRS-GFDTDVSVYNGLIDFYGK 256
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 140/312 (44%), Gaps = 10/312 (3%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
DV + Y + L ++A ++F + ++ W A I V +G A++ F E +
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFR 201
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
R +PN +T L+ACS L+LG +H + + D + V LI+ Y +C I
Sbjct: 202 RIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIR 261
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+ +F EM ++ ++ SL+A + +A ++ + + + VL+AC+
Sbjct: 262 SSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACA 321
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVG---RPEEAYDFITNMKIAPDH 285
++LG I + +E I +VD+ + G E+A+D + + +
Sbjct: 322 GMAGLELGRSIHAHAVKAC-VERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLN 380
Query: 286 IMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADS-GTYVLLSNAYASSGKWKEAVQIRAK 344
++G ++ L L E +A R C A + T+V L +A + +G + ++I
Sbjct: 381 SLIGGYAHQGQVDMALALFEDMAPR--GCGPAPNYMTFVSLLSACSRAGAVENGMKIFDS 438
Query: 345 MKEA-GVQKEPG 355
MK G+ EPG
Sbjct: 439 MKSTYGI--EPG 448
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 179/437 (40%), Positives = 273/437 (62%), Gaps = 2/437 (0%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD--N 111
T +++ Y G V A VF + K+ V W+AMI +N +AL+LF+ M + +
Sbjct: 218 TTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACD 277
Query: 112 VRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKAL 171
PN +T+V VL AC+ L ALE G+ +H+Y+ + +D V LI MY RCG+I
Sbjct: 278 TVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQ 337
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
+VF+ MK+RDV ++NSLI+ MHG +A+++F MIN+G+ P+ +TF+ VL ACSH G
Sbjct: 338 RVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAG 397
Query: 232 LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSL 291
LV+ +F+SM Y I P++EHY C+VD+L R R +EA + I NM P + GSL
Sbjct: 398 LVEEAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSL 457
Query: 292 LSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQ 351
L +C+IH ++L E+ + L + ++G YVLLS+ YA S W + ++R +++ G+Q
Sbjct: 458 LGSCRIHCNVELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWNDVRRVRKQLESRGLQ 517
Query: 352 KEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDW 411
K P CS IEV +I+ + + +PQ E++ + L +K +GY P T VV +D+++
Sbjct: 518 KIPSCSWIEVKRKIYSLVSIEEYNPQIEELCAFLITLLTEIKNQGYVPQTNVVTYDLDEE 577
Query: 412 EKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDR 471
EKE + HS +LA+ +GLI+T IR+ NLR+C DCH+ +K ++ T R+I++RD
Sbjct: 578 EKERIVLGHSGKLAVAFGLINTSKGEIIRISNNLRLCEDCHAFMKFVSKFTNREILLRDV 637
Query: 472 NRFHHFENGTCSCGDYW 488
NRFH F++G CSCGDYW
Sbjct: 638 NRFHCFKDGVCSCGDYW 654
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 142/297 (47%), Gaps = 9/297 (3%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D +T +IN Y + G V++A +VF + K W A+ L L L+ +M
Sbjct: 108 DPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMN 167
Query: 109 RDNVRPNEVTIVCVLSAC--SQLGALEL--GRWIHSYMGKHRIDLNHIVGGALINMYSRC 164
+ N T VL AC S+L L G+ IH+++ +H + + V L+++Y+R
Sbjct: 168 WIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARF 227
Query: 165 GDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIR--PTKVTFVG 222
G + A VF M ++++ +++++IA A + ++A+E+F+ M+ + P +T V
Sbjct: 228 GYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVS 287
Query: 223 VLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIA 282
VL AC+ ++ G + + R G++ + ++ + R G MK
Sbjct: 288 VLQACASLAALEHGKLVHAYVLRR-GLDSTLPVLNTLITMYGRCGEISTGQRVFDYMK-K 345
Query: 283 PDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSG-TYVLLSNAYASSGKWKEA 338
D I SL+S +HG + QI + +++ + S T++ + A + +G +EA
Sbjct: 346 RDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEA 402
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 13/214 (6%)
Query: 87 MIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHR 146
+I L R G + +A+ L P + T ++++C + +L G +H +
Sbjct: 49 LIQSLCRGGNLKQAVQLLC----CEPNPTKKTFELLINSCIEQNSLSDGVDVHHRLVGSG 104
Query: 147 IDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFR 206
+D + + LINMY G +D A +VF+E +E+ + +N++ LAM R + + ++
Sbjct: 105 LDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGEDLLVLYG 164
Query: 207 EMINQGIRPTKVTFVGVLNAC--SHGGLVDL--GFEIFQSMTRDYGIEPQIEHYGCIVDL 262
+M GI + T+ VL AC S + L G EI + R +G E + ++D+
Sbjct: 165 QMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILR-HGYEGHVHVMTTLLDV 223
Query: 263 LSRVGRPEEAYDFITNMKIAPD-HIMLGSLLSAC 295
+R G A M PD +I+ S + AC
Sbjct: 224 YARFGYVSYASSVFGAM---PDKNIVSWSAMIAC 254
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 34/196 (17%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H VL+ GL S L+ +YG+CGE ++FD M + DV++ +I+ Y
Sbjct: 301 GKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKK-RDVISWNSLISIYG 359
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HGL + +A+ +F M V P+ +T +
Sbjct: 360 MHGLGK-------------------------------KAIQIFENMINRGVSPSYITFIT 388
Query: 122 VLSACSQLGALELGRWI-HSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL ACS G +E + + S + K+RI ++++ R +D+A+++ + M +
Sbjct: 389 VLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFK 448
Query: 181 D-VTTYNSLIAGLAMH 195
T + SL+ +H
Sbjct: 449 PGPTVWGSLLGSCRIH 464
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 188/487 (38%), Positives = 282/487 (57%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G++IH +K+G S L++LY KC +
Sbjct: 752 GKQIHNHAIKIGHESELFVGNALIDLYAKCSD---------------------------- 783
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+E++ E+FS ++ + V W +I G ++G AL +FREM+ +V +VT
Sbjct: 784 ----MESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSS 839
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
VL AC+ ++ +H + K + + IV +LI+ Y++CG I A ++FE +KE D
Sbjct: 840 VLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECD 899
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++N++I+G A+HG++ A E+F M I+ +TFV +L+ C GLV G +F
Sbjct: 900 LVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFD 959
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SM D+GIEP +EHY CIV LL R GR +A +FI ++ AP ++ +LLS+C +H +
Sbjct: 960 SMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNV 1019
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LG A+++L+ D TYVLLSN Y+++G + R M+ GV+KEPG S +E+
Sbjct: 1020 ELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSWVEI 1079
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
E+H F +G HP I ++ L EGY P T+ VLHD+E+ +K L +HS
Sbjct: 1080 KGEVHAFSVGSEDHPCMRVINAMLEWLNLKAIREGYVPDTDEVLHDLEEEQKVRMLWVHS 1139
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ERLA+ YGL+ T P IR++KNLR C DCH++ K+I+ I K++IIVRD NRFHHFE GT
Sbjct: 1140 ERLALAYGLVMTPPGHPIRIMKNLRSCLDCHAIFKVISKIVKQEIIVRDINRFHHFEEGT 1199
Query: 482 CSCGDYW 488
CSCGDYW
Sbjct: 1200 CSCGDYW 1206
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 149/300 (49%), Gaps = 19/300 (6%)
Query: 56 MINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPN 115
+++ Y + G +E+A F V D + W+ MI + + +A +LF M R +V PN
Sbjct: 673 LLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPN 732
Query: 116 EVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNH----IVGGALINMYSRCGDIDKAL 171
E ++ VL AC+ + L+LG+ IH+ H I + H VG ALI++Y++C D++ +L
Sbjct: 733 EFSLSSVLQACANMPLLDLGKQIHN----HAIKIGHESELFVGNALIDLYAKCSDMESSL 788
Query: 172 QVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGG 231
++F +++ + ++N++I G + G A+ +FREM + T+VT+ VL AC+
Sbjct: 789 EIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTA 848
Query: 232 LVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSL 291
++ ++ + ++D ++ G +A + +K D + ++
Sbjct: 849 SINHVGQV-HCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKEC-DLVSWNAI 906
Query: 292 LSACKIHGKLQLGEQIAKRLLDCRS-----ADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
+S +HG+ + A+ L D S A+ T+V L + S+G + + + M+
Sbjct: 907 ISGYAVHGQAAM----AQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMR 962
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 116/227 (51%), Gaps = 1/227 (0%)
Query: 54 TVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVR 113
+ +I+ Y G+V +A VF + KD V WTAM+ N L +F +M+ +
Sbjct: 570 SALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSK 629
Query: 114 PNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQV 173
N + VL A L ++ LG+ IH+ K D V GAL++MY++CG+I+ A
Sbjct: 630 LNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLA 689
Query: 174 FEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLV 233
FE + DV ++ +I+ A ++ +A E+F M+ + P + + VL AC++ L+
Sbjct: 690 FEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLL 749
Query: 234 DLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK 280
DLG +I + G E ++ ++DL ++ E + + ++++
Sbjct: 750 DLGKQIHNHAIK-IGHESELFVGNALIDLYAKCSDMESSLEIFSSLR 795
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 123/294 (41%), Gaps = 37/294 (12%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D+ + V++N Y + G +A VF + ++ V + ++ G GE A LF+ ++
Sbjct: 464 DLFCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLR 523
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
+ N+ + VL + L L +H+ K D N VG ALI+ YS CG +
Sbjct: 524 WEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVS 583
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
A +VF+ + +D + ++++ + + +++F +M + VL A
Sbjct: 584 DARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAV 643
Query: 229 HGGLVDLGFEIFQ-SMTRDYGIEPQIEHYGCIVDLLSRVGRPEE---AYDFITN------ 278
V LG I S+ Y E + YG ++D+ ++ G E+ A++ +TN
Sbjct: 644 CLSSVVLGKGIHACSVKTLYDTERHV--YGALLDMYAKCGNIEDARLAFEMVTNDDVILW 701
Query: 279 -------------------------MKIAPDHIMLGSLLSACKIHGKLQLGEQI 307
++P+ L S+L AC L LG+QI
Sbjct: 702 SLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQI 755
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Query: 122 VLSACSQLGALELGRWIHSYM----GKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+L C G GR +H ++ G R+DL L+NMY++ G A +VF+ +
Sbjct: 434 LLQGCVARGDARGGRAVHGHVVRSGGLARLDL--FCANVLLNMYTKVGPFGSAHRVFDGL 491
Query: 178 KERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVL 224
ER++ ++ +L+ G A+ G EA +F+ + +G + VL
Sbjct: 492 PERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVL 538
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 174/441 (39%), Positives = 276/441 (62%), Gaps = 2/441 (0%)
Query: 50 VVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
+ + +++ Y + G +E A E+F + +D V TA+I G + G AL++F+ +Q
Sbjct: 187 IFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQS 246
Query: 110 DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDK 169
+ +RPN VT +L+A S L L+ G+ H ++ + + ++ +LI+MYS+CG++
Sbjct: 247 EGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSY 306
Query: 170 ALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQG-IRPTKVTFVGVLNACS 228
A ++F+ M ER ++N+++ G + HG E +E+FR M ++ ++P VT + VL+ CS
Sbjct: 307 AQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCS 366
Query: 229 HGGLVDLGFEIFQSMTR-DYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
HG + D G I+ M +YGI+P EHYGCIVD+L R GR +EA++FI M P +
Sbjct: 367 HGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGV 426
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
LGSLL AC++H + +GE + RL++ ++G YV+LSN YAS+G+W++ +RA M +
Sbjct: 427 LGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYASAGRWEDVNNVRAMMMQ 486
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
V KEPG S I+ +H F D HP+RE++ KM+E+ +K GY P VL+D
Sbjct: 487 KAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDISCVLYD 546
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
+++ +KE L HSE+LA+ +GLI+T IRV KNLR+C DCH+ K+ + + +R++
Sbjct: 547 VDEEQKEKMLLGHSEKLALTFGLITTGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVS 606
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
+RD+NRFH G CSCGDYW
Sbjct: 607 LRDKNRFHQIVKGICSCGDYW 627
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 156/338 (46%), Gaps = 71/338 (21%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+ +H ++K R +L+ YGKC +DA ++ DEMPE
Sbjct: 69 EGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPE-------------- 114
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
K+ V WTAMI + G + AL +F EM R + +PNE T
Sbjct: 115 ------------------KNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFA 156
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
VL++C + L LG+ IH + K D + VG +L++MY++ G I++A ++FE + ER
Sbjct: 157 TVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPER 216
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
DV + ++IAG A G EA+EMF+ + ++G+RP VT+ +L A S L+D G +
Sbjct: 217 DVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAH 276
Query: 241 -QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM-------------------- 279
+ R+ +++ ++D+ S+ G A NM
Sbjct: 277 CHVLRRELPFYAVLQN--SLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGL 334
Query: 280 ---------------KIAPDHIMLGSLLSACKIHGKLQ 302
++ PD + L ++LS C HGK++
Sbjct: 335 GREVLELFRLMRDEKRVKPDAVTLLAVLSGCS-HGKME 371
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 80/151 (52%), Gaps = 1/151 (0%)
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+AC AL G+ +H++M K R + L+ Y +C ++ A +V +EM E++
Sbjct: 57 LLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 116
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++ ++I+ + G S EA+ +F EM+ +P + TF VL +C + LG +I
Sbjct: 117 VVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQI-H 175
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA 272
+ + + I ++D+ ++ G+ EEA
Sbjct: 176 GLIVKWNYDSHIFVGSSLLDMYAKAGQIEEA 206
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 189/492 (38%), Positives = 278/492 (56%), Gaps = 36/492 (7%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR+ HG ++K G N L++LY KC M EC
Sbjct: 262 GRQFHGMMIKSGFHGNSHVGSGLIDLYSKCA---------GSMVECR------------- 299
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMAR-ALDLFREMQRDNVRPNEVTIV 120
+VF + D V W MI G +++ L FREMQR+ RP++ + V
Sbjct: 300 ---------KVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFV 350
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHI-VGGALINMYSRCGDIDKALQVFEEMKE 179
CV SACS L + LG+ +H+ K + N + V AL+ MYS+CG++ A +VF+ M E
Sbjct: 351 CVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPE 410
Query: 180 RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEI 239
+ + NS+IAG A HG +E++ +F M+ + I P +TF+ VL+AC H G V+ G +
Sbjct: 411 HNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKY 470
Query: 240 FQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHG 299
F M + IEP+ EHY C++DLL R G+ +EA I M P I +LL AC+ HG
Sbjct: 471 FNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHG 530
Query: 300 KLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSI 359
++L + A L ++ YV+LSN YAS+ +W+EA ++ M+E GV+K+PGCS I
Sbjct: 531 NVELAVKAANEFLRLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWI 590
Query: 360 EVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVL---HDIEDWEKEWA 416
E++ ++H F+ D HP ++I+ M ++ + +K GY P L ++E E+E
Sbjct: 591 EIDKKVHVFVAEDTSHPMIKEIHVYMGKMLKKMKQAGYVPDIRWALVKDEEVEPDERERR 650
Query: 417 LAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHH 476
L HSE+LA+ +GLIST+ I VVKNLR+C DCH+ +KLI+ +T R+I VRD +RFH
Sbjct: 651 LLYHSEKLAVAFGLISTEEGVPILVVKNLRICGDCHNAVKLISALTGREITVRDTHRFHC 710
Query: 477 FENGTCSCGDYW 488
F+ G CSC DYW
Sbjct: 711 FKEGHCSCRDYW 722
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 117/451 (25%), Positives = 194/451 (43%), Gaps = 60/451 (13%)
Query: 53 STVMINCYVEHGLVENAFEVFSRVKV---KDTVCWTAMIDGLVRNGEMARALDLFREMQR 109
+ ++ CY G + A VF + +D V W AMI ++ E A+ LFREM R
Sbjct: 177 NNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVR 236
Query: 110 DNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRC-GDID 168
++ + T+ VL+A + + L GR H M K N VG LI++YS+C G +
Sbjct: 237 RGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMV 296
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMH-GRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+ +VFEE+ D+ +N++I+G +++ S + + FREM G RP +FV V +AC
Sbjct: 297 ECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSAC 356
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA--------------- 272
S+ LG ++ + ++ +V + S+ G +A
Sbjct: 357 SNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSL 416
Query: 273 -------------------YDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLD 313
++ + IAP+ I ++LSAC GK++ G++ + +
Sbjct: 417 NSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKE 476
Query: 314 --CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILG 371
C ++ Y + + +GK KEA +I M PG SIE +LG
Sbjct: 477 RFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMP-----FNPG--SIEWAT-----LLG 524
Query: 372 DIR-HPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGL 430
R H E K E ++LE Y+ + V+L ++ W A +RL G+
Sbjct: 525 ACRKHGNVELAVKAANEF---LRLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGV 581
Query: 431 ISTKPYTTIRVVKNLRVC---NDCHSMIKLI 458
+ I + K + V + H MIK I
Sbjct: 582 KKKPGCSWIEIDKKVHVFVAEDTSHPMIKEI 612
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 133/305 (43%), Gaps = 9/305 (2%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+ +H K + + LY KCG +A F + + +V + +IN Y
Sbjct: 28 GKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSF-HLTQYPNVFSYNTLINAYA 86
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
+H L+ A VF + D V + +I GE L LF E++ + + T+
Sbjct: 87 KHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLGLDGFTLSG 146
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE-- 179
V++AC + L R +H ++ D V A++ YSR G + +A +VF EM E
Sbjct: 147 VITACGD--DVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVFREMGEGG 204
Query: 180 -RDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL-GF 237
RD ++N++I H +EAV +FREM+ +G++ T VL A + + DL G
Sbjct: 205 GRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFT--CVKDLVGG 262
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
F M G ++DL S+ + APD ++ +++S +
Sbjct: 263 RQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSL 322
Query: 298 HGKLQ 302
+ L
Sbjct: 323 YEDLS 327
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 183/487 (37%), Positives = 274/487 (56%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G IH ++ G + + L+ +Y +CG+ + +FD V+ N
Sbjct: 671 GMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFD------------VLAN--- 715
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
K++ W A+ G AL M+ D V ++ +
Sbjct: 716 -----------------KNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSV 758
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
L+ L L+ G+ +HS++ K +L+ V A ++MY +CG+ID ++ K R
Sbjct: 759 ALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRS 818
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
++N LI+ LA HG +A E F EM++ G++P VTFV +L+ACSHGGLVD G F
Sbjct: 819 KRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGLVYFS 878
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
SMT ++G+ IEH CI+DLL R GR EA FI M + P+ + SLL+ACK+HG L
Sbjct: 879 SMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAACKVHGNL 938
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
+LG + A RL + S+D YVL SN AS+ +W + +R +M+ ++K+P CS I++
Sbjct: 939 ELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQSLKKKPACSWIKL 998
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
N++ F +GD HPQ QIY K++EL+++ + EG+ P T L D ++ +KE L HS
Sbjct: 999 KNKVMTFGMGDQFHPQSAQIYAKLEELRKMTREEGHMPDTSYALQDTDEEQKEHNLWNHS 1058
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
ER+A+ +GLI++ + +R+ KNLRVC DCHS+ KL++ I RKI+VRD RFHHF G
Sbjct: 1059 ERIALAFGLINSAEGSPLRIFKNLRVCGDCHSVFKLVSKIVGRKIVVRDSYRFHHFHGGK 1118
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 1119 CSCSDYW 1125
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 134/287 (46%), Gaps = 4/287 (1%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
+ + ++N Y + G ++ A VF ++ ++ W MI G VR G +A+ F M
Sbjct: 181 NTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMF 240
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
+ V P+ I +++AC + G + G R IH Y+ K + N VG +L++ Y G +
Sbjct: 241 ENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSV 300
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+A ++FEE++E ++ ++ SL+ A +G + E + ++R + + G+ T T V+ C
Sbjct: 301 SEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTC 360
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
G +G++I + + + ++ + EEA NM+ D I
Sbjct: 361 GMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQ-ERDTIS 419
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGK 334
S+++A +G+ + E + R+ Y+ +S + G
Sbjct: 420 WNSIITASAHNGRFE--ESLGHFFWMRRTHPKTDYITISALLPACGS 464
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 147/349 (42%), Gaps = 70/349 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
GR +HG + K GL SN L+ +Y + G +DA E+
Sbjct: 471 GRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDA-----EL----------------- 508
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
VF + +D + W +M+ V +G+ + A+ L EM + N VT
Sbjct: 509 ----------VFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTT 558
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
LSAC L L++ +H+++ + N I+G L+ MY + G +D+A +V + M ERD
Sbjct: 559 ALSACYNLEKLKI---VHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERD 615
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V T+N+LI G A ++ F M +G+ +T V +L C
Sbjct: 616 VVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTC-------------- 661
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M+ DY L + G P A+ + ++ D + SL++ G L
Sbjct: 662 -MSPDY---------------LLKHGMPIHAHIVVAGFEL--DTYVQSSLITMYAQCGDL 703
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
I L + +S T+ + +A A G +EA++ A+M+ GV
Sbjct: 704 NTSSYIFDVLAN---KNSSTWNAIFSANAHYGPGEEALKFIARMRNDGV 749
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 139/288 (48%), Gaps = 35/288 (12%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
++++ ++ Y + GL++ A +V + +D V W A+I G + + + F M
Sbjct: 583 HNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLM 642
Query: 108 QRDNVRPNEVTIVCVLSAC-SQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
+R+ + N +TIV +L C S L+ G IH+++ +L+ V +LI MY++CGD
Sbjct: 643 RREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGD 702
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTF------ 220
++ + +F+ + ++ +T+N++ + A +G EA++ M N G+ + +F
Sbjct: 703 LNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALAT 762
Query: 221 VGVLNACS-----HGGLVDLGFE----IFQSMTRDYGIEPQIE---------------HY 256
+G L H ++ LGFE + + YG +I+ +
Sbjct: 763 IGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSW 822
Query: 257 GCIVDLLSRVG---RPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
++ L+R G + EA+ + ++ + PDH+ SLLSAC HG L
Sbjct: 823 NILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACS-HGGL 869
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 7/204 (3%)
Query: 31 CGEFKD---AMQLFDEM----PECNDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVC 83
CG F D Q+ ++ + + V + +I+ + + VE A VF+ ++ +DT+
Sbjct: 360 CGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTIS 419
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
W ++I NG +L F M+R + + + +TI +L AC L+ GR +H +
Sbjct: 420 WNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLIT 479
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
K ++ N V +L++MY++ G + A VF M RD+ ++NS++A G+ A+
Sbjct: 480 KSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAIL 539
Query: 204 MFREMINQGIRPTKVTFVGVLNAC 227
+ EM+ VTF L+AC
Sbjct: 540 LLVEMLKTRKAMNYVTFTTALSAC 563
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 145/331 (43%), Gaps = 37/331 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
R+IHG V+K GL SN V T +++ Y
Sbjct: 268 ARQIHGYVVKCGLMSN--------------------------------VFVGTSLLHFYG 295
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
HG V A ++F ++ + V WT+++ NG L+++R ++ + + T+
Sbjct: 296 THGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMAT 355
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHI-VGGALINMYSRCGDIDKALQVFEEMKER 180
V+ C G +G I + K +D + + V +LI+M+ +++A +VF M+ER
Sbjct: 356 VIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQER 415
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIF 240
D ++NS+I A +GR E++ F M + +T +L AC + G +
Sbjct: 416 DTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLH 475
Query: 241 QSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGK 300
+T+ G+E + ++ + ++ G E+A + + + A D I S++++ GK
Sbjct: 476 GLITKS-GLESNVCVCNSLLSMYAQAGSSEDA-ELVFHTMPARDLISWNSMMASHVEDGK 533
Query: 301 LQLGEQIAKRLLDCRSADSGTYVLLSNAYAS 331
+ +L R A + YV + A ++
Sbjct: 534 YSHAILLLVEMLKTRKAMN--YVTFTTALSA 562
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%)
Query: 127 SQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYN 186
S++ +G+ +H+ K I N L+NMYS+ G I A VF++M +R+ ++N
Sbjct: 158 SEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWN 217
Query: 187 SLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLG 236
++I+G G +A++ F M G+ P+ ++ AC G + G
Sbjct: 218 NMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEG 267
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 82/200 (41%), Gaps = 38/200 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG+++H ++KLG + +++YGKCGE D ++ +P+ + ++I+
Sbjct: 771 EGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRIL-PIPKIRSKRSWNILISAL 829
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
HG A E F EM ++P+ VT V
Sbjct: 830 ARHGFFRQATEA-------------------------------FHEMLDLGLKPDHVTFV 858
Query: 121 CVLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+LSACS G ++ G S M + H V +I++ R G + +A ++M
Sbjct: 859 SLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCV--CIIDLLGRSGRLAEAEGFIDKM 916
Query: 178 K-ERDVTTYNSLIAGLAMHG 196
+ + SL+A +HG
Sbjct: 917 PVPPNEFVWRSLLAACKVHG 936
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 175/441 (39%), Positives = 271/441 (61%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
++V + +++ Y + + A VF R+ ++ + WTAMI G +N A+ F EM
Sbjct: 311 DNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEM 370
Query: 108 QRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDI 167
Q D ++P++ T+ V+S+C+ L +LE G H + V AL+ +Y +CG I
Sbjct: 371 QMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSI 430
Query: 168 DKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNAC 227
+ A ++F+EM D ++ +L+ G A G++ E +++F +M+ G++P VTF+GVL+AC
Sbjct: 431 EDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSAC 490
Query: 228 SHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIM 287
S GLV+ G + F SM +D+GI P +HY C++DL SR GR +EA +FI M +PD
Sbjct: 491 SRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFG 550
Query: 288 LGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKE 347
+LLS+C++ G +++G+ A+ LL+ + +YVLL + +A+ G+W E +R M++
Sbjct: 551 WATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRD 610
Query: 348 AGVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHD 407
V+KEPGCS I+ N++H F D HP +IY+K++ L + EGY P VLHD
Sbjct: 611 RQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHD 670
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
+ D +K ++ HSE+LAI +GLI IR+VKNLRVC DCH+ K I+ IT R I+
Sbjct: 671 VADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDIL 730
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
VRD RFH F +GTCSCGD+W
Sbjct: 731 VRDAVRFHKFSDGTCSCGDFW 751
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 180/387 (46%), Gaps = 46/387 (11%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G +H QVL+LG + LV++Y K G +DA ++F EM E VV +I +
Sbjct: 165 GHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEM-EAKTVVMYNTLITGLL 223
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
++E+A +F + +D++ WT M+ GL +NG ALD+FR M+ + V ++ T
Sbjct: 224 RCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGS 283
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
+L+AC L ALE G+ IH+Y+ + + N VG AL++MYS+C I A VF M R+
Sbjct: 284 ILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRN 343
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
+ ++ ++I G + S EAV F EM GI+P T V+++C++ ++ G + F
Sbjct: 344 IISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQ-FH 402
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK--------------------- 280
+ G+ I +V L + G E+A+ M
Sbjct: 403 CLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAK 462
Query: 281 -------------IAPDHIMLGSLLSACKIHGKLQLGEQIAKRLLDCRSADSGT------ 321
+ PD + +LSAC G ++ G D D G
Sbjct: 463 ETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCD----YFDSMQKDHGIVPIDDH 518
Query: 322 YVLLSNAYASSGKWKEAVQIRAKMKEA 348
Y + + Y+ SG++KEA + +M +
Sbjct: 519 YTCMIDLYSRSGRFKEAEEFIKQMPHS 545
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 121/515 (23%), Positives = 204/515 (39%), Gaps = 122/515 (23%)
Query: 5 IHGQVLKLGLRSNRSTRLK-LVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYVEH 63
+H +LK L++ + L L+ Y K G A ++FDEMP+ N + +++
Sbjct: 34 VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPN-LFTRNALLSALAHS 92
Query: 64 GLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRD-NVRPNEVTIVCV 122
LV + +F+ + +D V + A+I G G AR++ L+R + R+ +VRP +T+ +
Sbjct: 93 RLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAM 152
Query: 123 LSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDV 182
+ S L LG +H + + VG L++MY++ G I A +VF+EM+ + V
Sbjct: 153 IMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTV 212
Query: 183 TTYNSLI-------------------------------AGLAMHGRSIEAVEMFREMINQ 211
YN+LI GL +G +EA+++FR M +
Sbjct: 213 VMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAE 272
Query: 212 GIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSR------ 265
G+ + TF +L AC ++ G +I +TR + E + +VD+ S+
Sbjct: 273 GVGIDQYTFGSILTACGALAALEEGKQIHAYITRTW-YEDNVFVGSALVDMYSKCRSIRL 331
Query: 266 --------------------VGR-----PEEAYDFITNMK---IAPDHIMLGSLLSACKI 297
VG EEA + M+ I PD LGS++S+C
Sbjct: 332 AEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCAN 391
Query: 298 HGKLQLGEQI-------------------------------AKRLLDCRSA-DSGTYVLL 325
L+ G Q A RL D S D ++ L
Sbjct: 392 LASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTAL 451
Query: 326 SNAYASSGKWKEAVQIRAKMKEAGVQK------------------EPGCSSIEVNNEIHE 367
YA GK KE + + KM G++ E GC + + H
Sbjct: 452 VTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHG 511
Query: 368 FILGDIRHPQREQIYK---KMQELKQIVKLEGYSP 399
+ D + +Y + +E ++ +K +SP
Sbjct: 512 IVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSP 546
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 90/198 (45%), Gaps = 34/198 (17%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
EG + H L GL + LV LYGKCG +DA +LFDEM +D V+ T ++ Y
Sbjct: 397 EGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEM-SFHDQVSWTALVTGY 455
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
+ G K K+T+ DLF +M + ++P+ VT +
Sbjct: 456 AQFG------------KAKETI-------------------DLFEKMLANGLKPDGVTFI 484
Query: 121 CVLSACSQLGALELG-RWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
VLSACS+ G +E G + S H I +I++YSR G +A + ++M
Sbjct: 485 GVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPH 544
Query: 180 R-DVTTYNSLIAGLAMHG 196
D + +L++ + G
Sbjct: 545 SPDAFGWATLLSSCRLRG 562
>gi|115480819|ref|NP_001064003.1| Os09g0573000 [Oryza sativa Japonica Group]
gi|113632236|dbj|BAF25917.1| Os09g0573000 [Oryza sativa Japonica Group]
Length = 555
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 186/491 (37%), Positives = 278/491 (56%), Gaps = 56/491 (11%)
Query: 2 GREIHGQVLKLGLRS-NRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
G +H + + GL S +R R L+ LY G+ A Q+FD P N Y
Sbjct: 117 GVALHASLFRRGLESPDRFIRASLLSLYAAAGDLPAARQVFDLSPP-----------NHY 165
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
V+ L LFR M+ + VT++
Sbjct: 166 VQ-------------------------------------VLRLFRTMRT----ADHVTLL 184
Query: 121 CVLSACSQLGALELGRWIHSYMGKH-RIDLNHIVGGALINMYSRCGDIDKALQVFEEMKE 179
+LSAC+ LGAL RW H+Y+ + + AL+NMY RCGD+ A +F
Sbjct: 185 ALLSACAHLGALHTARWAHAYLATTCSFPITTNLATALLNMYMRCGDVQTACSLFHSTPT 244
Query: 180 R--DVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGF 237
R DV T+ +IAGLA++G S +A+ +F M + I+P VT VL+AC+H G+VD G
Sbjct: 245 RHKDVHTWTVMIAGLALNGFSTDALHLFTHMKDHNIQPDSVTLTAVLSACTHAGMVDEGK 304
Query: 238 EIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKI 297
I + M DY ++P IEHYGC VDLL R G EEA I + D + G+LL AC+
Sbjct: 305 RILRRMPLDYHLQPTIEHYGCTVDLLGRAGLLEEALALIRAVPFKADVALWGALLVACRC 364
Query: 298 HGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCS 357
H ++G+ +A +L +G +V LSN YA++GKW ++R+ MK+ + K PG S
Sbjct: 365 HRNFEMGQMVAMEILRLDPQHAGAWVFLSNVYAAAGKWDLVQEVRSSMKQHRIHKPPGSS 424
Query: 358 SIEVNNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWAL 417
+E++ ++EF+ GD HPQ +QIY + E+ + + L+G+ P+T++V DI++ +KE +
Sbjct: 425 VVELDGVVYEFLSGDHSHPQSDQIYAMLDEIGKTLSLKGHKPATKLVTFDIDEEDKEVCI 484
Query: 418 AIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHF 477
+ HSE+LA+ +GLI+T+ IR+VKNLR+C DCHS++K+++ + R I+VRDRNRFHHF
Sbjct: 485 SQHSEKLAVAFGLINTRRGAVIRIVKNLRICEDCHSVMKVVSEVYDRVIVVRDRNRFHHF 544
Query: 478 ENGTCSCGDYW 488
++G+CSC DYW
Sbjct: 545 KSGSCSCLDYW 555
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 104/261 (39%), Gaps = 33/261 (12%)
Query: 81 TVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPNEVTIVCVLSACSQLGALEL----- 134
T + + I L R A+ L+R M PN T +L+AC++L +
Sbjct: 53 TFSYNSAIRALARGPRPHLAISLYRSMLSHSRSHPNNYTYPPLLAACARLADSDSSSAAA 112
Query: 135 ----GRWIHSYMGKHRID-LNHIVGGALINMYSRCGDIDKALQVFE-------------- 175
G +H+ + + ++ + + +L+++Y+ GD+ A QVF+
Sbjct: 113 AAAAGVALHASLFRRGLESPDRFIRASLLSLYAAAGDLPAARQVFDLSPPNHYVQVLRLF 172
Query: 176 -EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTF-VGVLNACSHGGLV 233
M+ D T +L++ A G A + P +LN G V
Sbjct: 173 RTMRTADHVTLLALLSACAHLGALHTARWAHAYLATTCSFPITTNLATALLNMYMRCGDV 232
Query: 234 DLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMK---IAPDHIMLGS 290
+F S + + + ++ L+ G +A T+MK I PD + L +
Sbjct: 233 QTACSLFHSTPTRHK---DVHTWTVMIAGLALNGFSTDALHLFTHMKDHNIQPDSVTLTA 289
Query: 291 LLSACKIHGKLQLGEQIAKRL 311
+LSAC G + G++I +R+
Sbjct: 290 VLSACTHAGMVDEGKRILRRM 310
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 186/487 (38%), Positives = 286/487 (58%), Gaps = 32/487 (6%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G+EIHG VL+ GL + D T +++ Y+
Sbjct: 470 GKEIHGYVLRNGLET--------------------------------DFFVGTSLLSHYI 497
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVC 121
G +A +F R+K K+ V W AMI G +NG +L LFR+ + ++ +E+ IV
Sbjct: 498 HCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVS 557
Query: 122 VLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERD 181
V ACSQL AL LG+ H Y+ K + VG ++I+MY++ G I ++ +VF+ +K+++
Sbjct: 558 VFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKN 617
Query: 182 VTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQ 241
V ++N++I +HG EA+E++ M G P + T++G+L AC H GLV+ G + F+
Sbjct: 618 VASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFK 677
Query: 242 SMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKL 301
M IEP++EHY C++D+L+R GR ++A + M D+ + SLL +C+ G L
Sbjct: 678 EMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGAL 737
Query: 302 QLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEV 361
++GE++AK+LL+ + YVLLSN YA GKW ++R MKE G+QK+ GCS IEV
Sbjct: 738 EIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEV 797
Query: 362 NNEIHEFILGDIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHS 421
++ F++GD P+ +I + L++ + GY P+T VLH++ + EK L HS
Sbjct: 798 GGRVYSFVVGDSLQPKSAEIRVIWRRLEERISEIGYKPNTSSVLHEVGEEEKIDILRGHS 857
Query: 422 ERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGT 481
E+LAI +GL+ T TT+R+ KNLR+C DCH+ KLI+ +R+I+VRD RFHHF +G
Sbjct: 858 EKLAISFGLLKTTKGTTLRIYKNLRICADCHNAAKLISKAVEREIVVRDNKRFHHFRDGL 917
Query: 482 CSCGDYW 488
CSC DYW
Sbjct: 918 CSCCDYW 924
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 159/299 (53%), Gaps = 11/299 (3%)
Query: 53 STVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNV 112
S I Y + G + +A +VF + K W A+I G +NG+ +AL L +M
Sbjct: 388 SNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQ 447
Query: 113 RPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQ 172
+P+ TI +L AC+ L +L+ G+ IH Y+ ++ ++ + VG +L++ Y CG A
Sbjct: 448 QPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARV 507
Query: 173 VFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGL 232
+F+ MK++++ ++N++I+G + +G E++ +FR+ +++GI+ ++ V V ACS
Sbjct: 508 LFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSA 567
Query: 233 VDLGFEIFQSMTRDYGIEPQIEHYGC-IVDLLSRVGRPEEA---YDFITNMKIAPDHIML 288
+ LG E + + ++ + GC I+D+ ++ G +E+ +D + + +A
Sbjct: 568 LRLGKEAHGYVLK--ALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVAS----W 621
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDC-RSADSGTYVLLSNAYASSGKWKEAVQIRAKMK 346
+++ A IHG + ++ +R+ + D TY+ + A +G +E ++ +M+
Sbjct: 622 NAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQ 680
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 125/234 (53%), Gaps = 4/234 (1%)
Query: 48 NDVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM 107
ND V +T +I Y G ++ VF ++ K+ + W A++ G RNG + +F ++
Sbjct: 77 NDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDL 136
Query: 108 QRD-NVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGD 166
D + +P+ T V+ AC + + LG IH + K + L+ VG AL+ MY +CG
Sbjct: 137 VSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGA 196
Query: 167 IDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMIN-QGIRPTKVTFVGVLN 225
+D+A++VF+ M E ++ ++NS+I + +G S ++ ++ EM+ +G+ P VT V +L
Sbjct: 197 VDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILP 256
Query: 226 ACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEA-YDFITN 278
C+ G VD+G I + G+ ++ +V + S+ G EA F+ N
Sbjct: 257 VCAGEGEVDIGMGI-HGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKN 309
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 160/387 (41%), Gaps = 78/387 (20%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCYV 61
G IHG V+K+GL + LV +YGKCG
Sbjct: 165 GEVIHGMVIKMGLVLDVFVGNALVGMYGKCGA---------------------------- 196
Query: 62 EHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREM-QRDNVRPNEVTIV 120
V+ A +VF + + V W +MI NG + DL EM + + P+ VT+V
Sbjct: 197 ----VDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVV 252
Query: 121 CVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKER 180
+L C+ G +++G IH K + +V A++ MYS+CG +++A F + +
Sbjct: 253 TILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNK 312
Query: 181 DVTTYNSLIAGLAMHGRSIEAVEMFREMINQG--IRPTKVTFVGVLNAC----------- 227
+V ++N++I+ ++ G EA + +EM QG ++ +VT + VL AC
Sbjct: 313 NVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKE 372
Query: 228 SHG-----------------------GLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLS 264
HG G ++ ++F + + + + ++ +
Sbjct: 373 LHGYSFRHCFQHVELSNAFILAYAKCGALNSAEKVFHGIG-----DKTVSSWNALIGGHA 427
Query: 265 RVGRPEEAYDFITNMKIA---PDHIMLGSLLSACKIHGKLQLGEQIAKRLL-DCRSADSG 320
+ G P +A + M + PD + SLL AC LQ G++I +L + D
Sbjct: 428 QNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFF 487
Query: 321 TYVLLSNAYASSGKWKEAVQIRAKMKE 347
L + Y GK A + +MK+
Sbjct: 488 VGTSLLSHYIHCGKASSARVLFDRMKD 514
>gi|356523117|ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14330-like [Glycine max]
Length = 650
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 174/441 (39%), Positives = 277/441 (62%), Gaps = 1/441 (0%)
Query: 49 DVVASTVMINCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQ 108
D V + ++ YVE G + +VF + ++ V W +I G G + L FR MQ
Sbjct: 210 DQVVNNALLGLYVEIGCFDEVLKVFEEMPQRNVVSWNTLIAGFAGQGRVFETLSAFRVMQ 269
Query: 109 RDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDID 168
R+ + + +T+ +L C+Q+ AL G+ IH + K R + + + +L++MY++CG+I
Sbjct: 270 REGMGFSWITLTTMLPVCAQVTALHSGKEIHGQILKSRKNADVPLLNSLMDMYAKCGEIG 329
Query: 169 KALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACS 228
+VF+ M +D+T++N+++AG +++G+ EA+ +F EMI GI P +TFV +L+ CS
Sbjct: 330 YCEKVFDRMHSKDLTSWNTMLAGFSINGQIHEALCLFDEMIRYGIEPNGITFVALLSGCS 389
Query: 229 HGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIML 288
H GL G +F ++ +D+G++P +EHY C+VD+L R G+ +EA N+ + P +
Sbjct: 390 HSGLTSEGKRLFSNVMQDFGVQPSLEHYACLVDILGRSGKFDEALSVAENIPMRPSGSIW 449
Query: 289 GSLLSACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEA 348
GSLL++C+++G + L E +A+RL + + G YV+LSN YA++G W++ ++R M
Sbjct: 450 GSLLNSCRLYGNVALAEVVAERLFEIEPNNPGNYVMLSNIYANAGMWEDVKRVREMMALT 509
Query: 349 GVQKEPGCSSIEVNNEIHEFILGDIRHPQREQIYKKM-QELKQIVKLEGYSPSTEVVLHD 407
G++K+ GCS I++ ++IH F+ G + YKK+ EL VK GY P+T VVLHD
Sbjct: 510 GMKKDAGCSWIQIKHKIHTFVAGGSSDFRCSAEYKKIWNELSNAVKNLGYVPNTGVVLHD 569
Query: 408 IEDWEKEWALAIHSERLAICYGLISTKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKII 467
I + K + HSERLA + LI+T IR+ KNLRVC DCHS +K ++ +T+R I+
Sbjct: 570 INEEMKAVWVCEHSERLAAVFALINTGAGMPIRITKNLRVCVDCHSWMKAVSKVTRRLIV 629
Query: 468 VRDRNRFHHFENGTCSCGDYW 488
+RD NRFHHFENG+CSC DYW
Sbjct: 630 LRDTNRFHHFENGSCSCKDYW 650
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 164/360 (45%), Gaps = 47/360 (13%)
Query: 2 GREIHGQVLKLGLR--SNRSTRLKLVELYGKCGEFKDAMQLF---DEMPECNDVVASTVM 56
GR++H +L+ R N + + KL+ LY CG +A ++F DE P V
Sbjct: 89 GRKLHLHLLRSQNRVLENPTLKTKLITLYSVCGRVNEARRVFQIDDEKPPEEPV------ 142
Query: 57 INCYVEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNE 116
W AM G RNG AL L+R+M V+P
Sbjct: 143 ---------------------------WVAMAIGYSRNGFSHEALLLYRDMLSCCVKPGN 175
Query: 117 VTIVCVLSACSQLGALELGRWIHSYMGKHRI-DLNHIVGGALINMYSRCGDIDKALQVFE 175
L ACS L +GR IH+ + KH + + + +V AL+ +Y G D+ L+VFE
Sbjct: 176 FAFSMALKACSDLDNALVGRAIHAQIVKHDVGEADQVVNNALLGLYVEIGCFDEVLKVFE 235
Query: 176 EMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDL 235
EM +R+V ++N+LIAG A GR E + FR M +G+ + +T +L C+ +
Sbjct: 236 EMPQRNVVSWNTLIAGFAGQGRVFETLSAFRVMQREGMGFSWITLTTMLPVCAQVTALHS 295
Query: 236 GFEIFQSMTRDYGIEPQIEHYGCIVDLLSR---VGRPEEAYDFITNMKIAPDHIMLGSLL 292
G EI + + + ++D+ ++ +G E+ +D + + + + ML
Sbjct: 296 GKEIHGQILKSRK-NADVPLLNSLMDMYAKCGEIGYCEKVFDRMHSKDLTSWNTMLAGFS 354
Query: 293 SACKIHGKLQLGEQIAKRLLDCRSADSGTYVLLSNAYASSGKWKEAVQIRAK-MKEAGVQ 351
+IH L L +++ + ++ + T+V L + + SG E ++ + M++ GVQ
Sbjct: 355 INGQIHEALCLFDEMIRYGIE---PNGITFVALLSGCSHSGLTSEGKRLFSNVMQDFGVQ 411
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 88/200 (44%), Gaps = 38/200 (19%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECNDVVASTVMINCY 60
G+EIHGQ+LK ++ L+++Y KCGE Y
Sbjct: 295 SGKEIHGQILKSRKNADVPLLNSLMDMYAKCGEIG------------------------Y 330
Query: 61 VEHGLVENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIV 120
E +VF R+ KD W M+ G NG++ AL LF EM R + PN +T V
Sbjct: 331 CE--------KVFDRMHSKDLTSWNTMLAGFSINGQIHEALCLFDEMIRYGIEPNGITFV 382
Query: 121 CVLSACSQLGALELGRWIHSYMGKH---RIDLNHIVGGALINMYSRCGDIDKALQVFEEM 177
+LS CS G G+ + S + + + L H L+++ R G D+AL V E +
Sbjct: 383 ALLSGCSHSGLTSEGKRLFSNVMQDFGVQPSLEHY--ACLVDILGRSGKFDEALSVAENI 440
Query: 178 KERDV-TTYNSLIAGLAMHG 196
R + + SL+ ++G
Sbjct: 441 PMRPSGSIWGSLLNSCRLYG 460
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 138/326 (42%), Gaps = 42/326 (12%)
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEV--TIVCVLSACSQLGALELGRWIHSY 141
+ + + L + G + +AL L + + E +I L AC +LE GR +H +
Sbjct: 36 FNSTLKSLCKWGNLDKALRLIESSKPTPIEEEEEEESISLFLHACISRRSLEHGRKLHLH 95
Query: 142 M--GKHRIDLNHIVGGALINMYSRCGDIDKALQVFE--EMKERDVTTYNSLIAGLAMHGR 197
+ ++R+ N + LI +YS CG +++A +VF+ + K + + ++ G + +G
Sbjct: 96 LLRSQNRVLENPTLKTKLITLYSVCGRVNEARRVFQIDDEKPPEEPVWVAMAIGYSRNGF 155
Query: 198 SIEAVEMFREMINQGIRPTKVTFVGVLNACS---------------------------HG 230
S EA+ ++R+M++ ++P F L ACS +
Sbjct: 156 SHEALLLYRDMLSCCVKPGNFAFSMALKACSDLDNALVGRAIHAQIVKHDVGEADQVVNN 215
Query: 231 GLVDLGFEI--FQSMTRDYGIEPQ--IEHYGCIVDLLSRVGRPEE---AYDFITNMKIAP 283
L+ L EI F + + + PQ + + ++ + GR E A+ + +
Sbjct: 216 ALLGLYVEIGCFDEVLKVFEEMPQRNVVSWNTLIAGFAGQGRVFETLSAFRVMQREGMGF 275
Query: 284 DHIMLGSLLSACKIHGKLQLGEQIAKRLLDCR-SADSGTYVLLSNAYASSGKWKEAVQIR 342
I L ++L C L G++I ++L R +AD L + YA G+ ++
Sbjct: 276 SWITLTTMLPVCAQVTALHSGKEIHGQILKSRKNADVPLLNSLMDMYAKCGEIGYCEKVF 335
Query: 343 AKMKEAGVQK-EPGCSSIEVNNEIHE 367
+M + + +N +IHE
Sbjct: 336 DRMHSKDLTSWNTMLAGFSINGQIHE 361
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 186/537 (34%), Positives = 308/537 (57%), Gaps = 51/537 (9%)
Query: 2 GREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN------------- 48
G+ +H +K + L+++Y KCG+ A+++F++M E N
Sbjct: 270 GKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTR 329
Query: 49 ---------------------DVVASTVMINCYVEHGLVENAFEVFSRVKVKDT-----V 82
DVVA T +++ G ++N +V +K + V
Sbjct: 330 DGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFV 389
Query: 83 CWTAMIDGLVRNGEMARALDLFREMQRDNV----------RPNEVTIVCVLSACSQLGAL 132
C A++D + G M A +F M ++ +P+ T+ CVL AC+ L AL
Sbjct: 390 C-NALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSAL 448
Query: 133 ELGRWIHSYMGKHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGL 192
E G+ IH Y+ ++ + V AL+++Y +CG + A +F+ + +D+ ++ +IAG
Sbjct: 449 ERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGY 508
Query: 193 AMHGRSIEAVEMFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQ 252
MHG EA+ F EM + GI P +V+F+ +L ACSH GL++ G+ F M D+ IEP+
Sbjct: 509 GMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPK 568
Query: 253 IEHYGCIVDLLSRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQIAKRLL 312
+EHY C+VDLLSR G +AY+F+ + IAPD + G+LL C+ + ++L E++A+R+
Sbjct: 569 LEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVF 628
Query: 313 DCRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKEPGCSSIEVNNEIHEFILG- 371
+ ++G YVLL+N YA + KW+E ++R K+ + G++K PGCS IE+ +++ F+ G
Sbjct: 629 ELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGN 688
Query: 372 DIRHPQREQIYKKMQELKQIVKLEGYSPSTEVVLHDIEDWEKEWALAIHSERLAICYGLI 431
+ HP + I ++++++ +K EG+ P T+ L + ++ +KE AL HSE+LA+ +GL+
Sbjct: 689 NSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLL 748
Query: 432 STKPYTTIRVVKNLRVCNDCHSMIKLIANITKRKIIVRDRNRFHHFENGTCSCGDYW 488
+ P TIRV KNLRVC DCH M K ++ T+R+I++RD NRFHHF++G CSC +W
Sbjct: 749 TLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 193/417 (46%), Gaps = 65/417 (15%)
Query: 1 EGREIHGQVLKLGLRSNRSTRLKLVELYGKCGEFKDAMQLFDEMPECN------------ 48
+G+++H + + + + LKLV Y CG+ K+ ++FD M + N
Sbjct: 117 DGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYA 176
Query: 49 ---DVVASTVMINCYVEHGL----VENAFEVFSRVKVKDTVCWTAMIDGLVRNGEMARAL 101
D S + VE G+ E+AFE+F ++ +D + W +MI G V NG R L
Sbjct: 177 KIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGL 236
Query: 102 DLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMGKHRIDLNHIVGGALINMY 161
++++M + + TI+ VL C+ G L LG+ +HS K + L++MY
Sbjct: 237 GIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMY 296
Query: 162 SRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVEMFREMINQGIRPTKVTFV 221
S+CGD+D AL+VFE+M ER+V ++ S+IAG GRS A+++ ++M +G++ V
Sbjct: 297 SKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAIT 356
Query: 222 GVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLLSRVGRPEEAYDFITNM-- 279
+L+AC+ G +D G ++ + + +E + ++D+ ++ G E A + M
Sbjct: 357 SILHACARSGSLDNGKDVHDYIKAN-NMESNLFVCNALMDMYAKCGSMEAANSVFSTMVV 415
Query: 280 -----------KIAPDHIMLGSLLSACKIHGKLQLGEQI--------------------- 307
++ PD + +L AC L+ G++I
Sbjct: 416 KDIISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVD 475
Query: 308 ----------AKRLLD-CRSADSGTYVLLSNAYASSGKWKEAVQIRAKMKEAGVQKE 353
A+ L D S D ++ ++ Y G EA+ +M++AG++ +
Sbjct: 476 LYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPD 532
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 119/271 (43%), Gaps = 26/271 (9%)
Query: 84 WTAMIDGLVRNGEMARALDLFREMQRDNVRPNEVTIVCVLSACSQLGALELGRWIHSYMG 143
+ A I + G++ A++L Q+ + T VL C+ L + G+ +HS +
Sbjct: 69 YNAKILHFCQLGDLENAMELICMCQKSELETK--TYGSVLQLCAGLKSFTDGKKVHSIIK 126
Query: 144 KHRIDLNHIVGGALINMYSRCGDIDKALQVFEEMKERDVTTYNSLIAGLAMHGRSIEAVE 203
+ + ++ +G L++ Y+ CGD+ + +VF+ M++++V +N +++ A G E++
Sbjct: 127 SNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESIC 186
Query: 204 MFREMINQGIRPTKVTFVGVLNACSHGGLVDLGFEIFQSMTRDYGIEPQIEHYGCIVDLL 263
+F+ M+ +GI G + FE+F + I G + + L
Sbjct: 187 LFKIMVEKGI---------------EGKRPESAFELFDKLCDRDVISWNSMISGYVSNGL 231
Query: 264 SRVGRPEEAYDFITNMKIAPDHIMLGSLLSACKIHGKLQLGEQI----AKRLLDCRSADS 319
+ G Y + + I D + S+L C G L LG+ + K + R S
Sbjct: 232 TERGLG--IYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFS 289
Query: 320 GTYVLLSNAYASSGKWKEAVQIRAKMKEAGV 350
T L + Y+ G A+++ KM E V
Sbjct: 290 NT---LLDMYSKCGDLDGALRVFEKMGERNV 317
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.138 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,328,987,645
Number of Sequences: 23463169
Number of extensions: 293163455
Number of successful extensions: 876449
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9894
Number of HSP's successfully gapped in prelim test: 2703
Number of HSP's that attempted gapping in prelim test: 707684
Number of HSP's gapped (non-prelim): 62213
length of query: 488
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 341
effective length of database: 8,910,109,524
effective search space: 3038347347684
effective search space used: 3038347347684
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)