Query 036289
Match_columns 149
No_of_seqs 271 out of 1564
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 19:18:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036289.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036289hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 99.6 6E-15 2E-19 92.8 8.7 67 28-95 1-67 (68)
2 4a4j_A Pacszia, cation-transpo 99.5 1.8E-13 6.1E-18 85.4 10.2 64 29-92 2-68 (69)
3 3dxs_X Copper-transporting ATP 99.5 1.3E-13 4.6E-18 87.2 9.3 67 28-94 1-71 (74)
4 1cc8_A Protein (metallochapero 99.5 5.4E-13 1.8E-17 84.4 10.0 67 28-94 4-71 (73)
5 3fry_A Probable copper-exporti 99.5 2.4E-13 8.3E-18 86.3 8.4 66 27-94 3-69 (73)
6 2crl_A Copper chaperone for su 99.4 5.2E-12 1.8E-16 85.2 10.0 71 27-97 17-87 (98)
7 2l3m_A Copper-ION-binding prot 99.3 1.3E-11 4.5E-16 76.3 9.8 64 27-90 3-70 (71)
8 2roe_A Heavy metal binding pro 99.3 3.5E-12 1.2E-16 78.5 6.7 62 32-93 3-65 (66)
9 2xmm_A SSR2857 protein, ATX1; 99.3 3.4E-12 1.1E-16 77.2 6.6 60 31-90 3-63 (64)
10 1osd_A MERP, hypothetical prot 99.3 1.8E-11 6.1E-16 75.7 9.6 66 28-93 2-71 (72)
11 2xmw_A PACS-N, cation-transpor 99.3 2.4E-11 8.3E-16 74.8 9.8 64 29-92 3-69 (71)
12 2k2p_A Uncharacterized protein 99.3 4.4E-12 1.5E-16 83.3 6.6 66 25-90 18-84 (85)
13 1mwy_A ZNTA; open-faced beta-s 99.3 3.6E-11 1.2E-15 75.2 10.2 66 28-93 2-69 (73)
14 1q8l_A Copper-transporting ATP 99.3 1.9E-11 6.6E-16 79.0 8.6 70 28-97 8-81 (84)
15 1aw0_A Menkes copper-transport 99.3 3.2E-11 1.1E-15 74.5 9.1 64 30-93 4-71 (72)
16 3cjk_B Copper-transporting ATP 99.3 5.1E-11 1.7E-15 74.6 10.0 65 30-94 3-71 (75)
17 1opz_A Potential copper-transp 99.3 3.8E-11 1.3E-15 74.7 9.2 67 27-93 4-74 (76)
18 2g9o_A Copper-transporting ATP 99.3 2.8E-11 9.6E-16 79.8 9.0 68 29-96 3-77 (90)
19 2qif_A Copper chaperone COPZ; 99.3 5E-11 1.7E-15 72.2 9.5 62 29-90 2-67 (69)
20 1y3j_A Copper-transporting ATP 99.2 2E-11 7E-16 77.1 7.0 67 28-94 2-72 (77)
21 1fvq_A Copper-transporting ATP 99.2 5.5E-11 1.9E-15 73.5 8.5 65 30-94 3-70 (72)
22 1kvi_A Copper-transporting ATP 99.2 4.1E-11 1.4E-15 75.8 8.1 67 28-94 7-77 (79)
23 1cpz_A Protein (COPZ); copper 99.2 5.8E-11 2E-15 72.5 8.5 61 32-92 3-67 (68)
24 2kt2_A Mercuric reductase; nme 99.2 7.2E-11 2.5E-15 72.6 8.2 62 32-93 3-67 (69)
25 1jww_A Potential copper-transp 99.2 8E-11 2.7E-15 74.3 8.5 68 28-95 2-73 (80)
26 2kkh_A Putative heavy metal tr 99.2 1.5E-10 5.2E-15 76.6 10.1 71 25-95 12-86 (95)
27 1yg0_A COP associated protein; 99.2 7.6E-11 2.6E-15 71.5 8.0 61 30-90 2-65 (66)
28 2ldi_A Zinc-transporting ATPas 99.2 6.3E-11 2.2E-15 72.5 7.2 64 28-91 2-69 (71)
29 2kyz_A Heavy metal binding pro 99.2 5E-11 1.7E-15 73.5 6.2 60 31-92 3-63 (67)
30 1yjr_A Copper-transporting ATP 99.2 1.4E-10 4.8E-15 72.2 7.9 64 30-93 5-72 (75)
31 2ofg_X Zinc-transporting ATPas 99.1 2.4E-10 8.1E-15 78.3 9.1 66 28-93 7-76 (111)
32 1p6t_A Potential copper-transp 99.1 2.1E-10 7.3E-15 81.1 8.8 68 28-95 73-144 (151)
33 2ew9_A Copper-transporting ATP 99.1 2.1E-10 7.1E-15 80.8 8.6 65 29-93 80-148 (149)
34 1qup_A Superoxide dismutase 1 99.1 6E-10 2E-14 85.8 10.3 70 29-98 6-75 (222)
35 2aj0_A Probable cadmium-transp 99.0 4.2E-10 1.4E-14 69.9 6.1 59 30-92 4-63 (71)
36 2rop_A Copper-transporting ATP 99.0 1.5E-09 5E-14 81.2 9.4 67 29-95 122-192 (202)
37 1jk9_B CCS, copper chaperone f 99.0 2.2E-09 7.6E-14 83.9 9.3 70 29-98 7-76 (249)
38 2ew9_A Copper-transporting ATP 99.0 3.1E-09 1E-13 74.7 8.5 67 28-94 3-73 (149)
39 1p6t_A Potential copper-transp 98.7 9E-08 3.1E-12 67.4 8.8 63 28-90 5-71 (151)
40 2rop_A Copper-transporting ATP 98.6 7E-08 2.4E-12 71.9 7.2 65 27-91 18-89 (202)
41 3j09_A COPA, copper-exporting 98.6 1.1E-07 3.9E-12 83.9 8.6 64 30-93 3-70 (723)
42 3bpd_A Uncharacterized protein 90.0 1.4 4.7E-05 29.3 6.7 67 27-94 5-80 (100)
43 2raq_A Conserved protein MTH88 88.4 2.6 8.9E-05 27.8 7.1 66 27-93 5-79 (97)
44 2x3d_A SSO6206; unknown functi 87.7 3 0.0001 27.5 7.1 65 28-93 4-78 (96)
45 3lvj_C Sulfurtransferase TUSA; 83.3 5.3 0.00018 25.0 6.6 55 31-94 11-68 (82)
46 1jdq_A TM006 protein, hypothet 81.2 6 0.0002 25.8 6.4 55 31-94 27-84 (98)
47 3cq1_A Putative uncharacterize 81.2 2.5 8.5E-05 27.7 4.6 37 30-66 42-84 (103)
48 1je3_A EC005, hypothetical 8.6 77.6 4.2 0.00014 26.6 4.7 55 30-93 27-84 (97)
49 1uwd_A Hypothetical protein TM 76.8 3.9 0.00013 26.7 4.5 37 30-66 43-85 (103)
50 3hz7_A Uncharacterized protein 75.8 5.3 0.00018 25.4 4.8 53 32-94 3-60 (87)
51 2jsx_A Protein NAPD; TAT, proo 68.5 21 0.00072 23.1 6.6 46 40-85 16-62 (95)
52 3lno_A Putative uncharacterize 66.7 4.9 0.00017 26.5 3.1 37 30-66 45-88 (108)
53 1fvg_A Peptide methionine sulf 52.5 53 0.0018 24.3 6.9 51 28-83 43-115 (199)
54 4gwb_A Peptide methionine sulf 47.3 41 0.0014 24.2 5.4 44 40-83 9-70 (168)
55 1pav_A Hypothetical protein TA 47.0 10 0.00035 23.2 2.0 52 32-92 8-62 (78)
56 2j89_A Methionine sulfoxide re 45.8 72 0.0025 24.6 6.9 51 28-83 94-166 (261)
57 3bqh_A PILB, peptide methionin 45.3 60 0.002 23.8 6.2 44 40-83 9-74 (193)
58 1ff3_A Peptide methionine sulf 43.0 91 0.0031 23.2 6.9 51 28-83 42-114 (211)
59 3e0m_A Peptide methionine sulf 40.3 81 0.0028 25.0 6.6 44 40-83 9-72 (313)
60 1nwa_A Peptide methionine sulf 38.5 40 0.0014 25.0 4.3 51 28-83 25-93 (203)
61 3v4k_A DNA DC->DU-editing enzy 37.6 35 0.0012 25.3 3.9 65 30-98 101-166 (203)
62 2k1h_A Uncharacterized protein 31.8 98 0.0033 19.9 4.9 38 46-85 41-80 (94)
63 3vow_A Probable DNA DC->DU-edi 28.3 71 0.0024 23.4 4.1 59 30-98 87-153 (190)
64 1t1v_A SH3BGRL3, SH3 domain-bi 23.4 78 0.0027 19.3 3.2 32 31-63 4-40 (93)
65 2fi0_A Conserved domain protei 23.2 62 0.0021 19.9 2.7 18 74-91 61-78 (81)
66 2w7v_A General secretion pathw 22.5 1.6E+02 0.0055 18.9 5.3 50 45-95 16-71 (95)
67 3cx5_F Cytochrome B-C1 complex 22.3 19 0.00063 25.5 0.0 14 3-16 3-16 (146)
68 2f1f_A Acetolactate synthase i 22.0 1.8E+02 0.0063 20.4 5.3 87 4-91 14-114 (164)
69 3pro_C Alpha-lytic protease; P 20.0 1.8E+02 0.0062 20.6 4.9 35 54-88 114-149 (166)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.59 E-value=6e-15 Score=92.76 Aligned_cols=67 Identities=25% Similarity=0.459 Sum_probs=62.1
Q ss_pred ceEEEEEEcCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEccC
Q 036289 28 LQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWPY 95 (149)
Q Consensus 28 ~~~v~l~Vgm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a~~~~~ 95 (149)
|.+.+|.|||+|.+|+.+|+++|.+++|| ++++|+..++++|.+.+++++|.++|+++||++.+|+.
T Consensus 1 m~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~ 67 (68)
T 3iwl_A 1 MPKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGL 67 (68)
T ss_dssp -CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTCSCEEEEEC
T ss_pred CceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCceEecCC
Confidence 34677888999999999999999999999 99999999999999989999999999999999998874
No 2
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.51 E-value=1.8e-13 Score=85.37 Aligned_cols=64 Identities=25% Similarity=0.527 Sum_probs=59.8
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEE--ecCCHHHHHHHHHhcCCceEE
Q 036289 29 QTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT--GYVEANKVLKKAKSTGKRAEI 92 (149)
Q Consensus 29 ~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~--g~~~~~~I~~~I~~~G~~a~~ 92 (149)
+++.|.| ||+|.+|+.+|+++|.+++||..+++|+..++++|. +.+++++|.++|+++||++++
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~ 68 (69)
T 4a4j_A 2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARV 68 (69)
T ss_dssp EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHcCCceEe
Confidence 4678999 999999999999999999999999999999999998 558899999999999999876
No 3
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.50 E-value=1.3e-13 Score=87.20 Aligned_cols=67 Identities=22% Similarity=0.394 Sum_probs=61.8
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEcc
Q 036289 28 LQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY---VEANKVLKKAKSTGKRAEIWP 94 (149)
Q Consensus 28 ~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~---~~~~~I~~~I~~~G~~a~~~~ 94 (149)
|++++|.| ||+|.+|+.+|+++|.+++||.++.+|+..++++|..+ ++.++|.++|+++||+++++.
T Consensus 1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (74)
T 3dxs_X 1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILA 71 (74)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEE
T ss_pred CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEcc
Confidence 56788999 99999999999999999999999999999999999742 689999999999999998875
No 4
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.47 E-value=5.4e-13 Score=84.37 Aligned_cols=67 Identities=27% Similarity=0.435 Sum_probs=62.2
Q ss_pred ceEEEEEEcCcChhHHHHHHHHHhCCC-CeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEcc
Q 036289 28 LQTVDLKVRMDCDGCELKVKNAVSSLS-GVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWP 94 (149)
Q Consensus 28 ~~~v~l~Vgm~C~~C~~kV~k~L~~~~-GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a~~~~ 94 (149)
+.++.|.|.|+|.+|+.+|+++|.+++ ||.++++|+..++++|.+..+.++|.+.|+++||++.+|.
T Consensus 4 m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (73)
T 1cc8_A 4 IKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSGK 71 (73)
T ss_dssp CEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEEEEE
T ss_pred ceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCCceeee
Confidence 456778889999999999999999999 9999999999999999988899999999999999998775
No 5
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.47 E-value=2.4e-13 Score=86.30 Aligned_cols=66 Identities=20% Similarity=0.429 Sum_probs=62.2
Q ss_pred cceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEcc
Q 036289 27 QLQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWP 94 (149)
Q Consensus 27 ~~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a~~~~ 94 (149)
.|.+++|.| ||+|.+|+.+|+++|.+ +||..+.+|+..++++|..+ ++++|.++|+++||.+.+.+
T Consensus 3 ~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~~~Gy~~~~~~ 69 (73)
T 3fry_A 3 SVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVEAAGYQAKLRS 69 (73)
T ss_dssp CCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHHHTTCEEEECC
T ss_pred ccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHHHcCCceEecC
Confidence 367789999 99999999999999999 99999999999999999987 99999999999999998876
No 6
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=5.2e-12 Score=85.16 Aligned_cols=71 Identities=25% Similarity=0.419 Sum_probs=64.9
Q ss_pred cceEEEEEEcCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEccCCC
Q 036289 27 QLQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWPYVP 97 (149)
Q Consensus 27 ~~~~v~l~Vgm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a~~~~~~~ 97 (149)
.+.+++|.|.|+|.+|+.+|+++|.+++||..+++|+..++++|...++.++|.+.|+++||.+.++...+
T Consensus 17 ~~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~~~~~~~ 87 (98)
T 2crl_A 17 TLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGS 87 (98)
T ss_dssp CCEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEESCC
T ss_pred cceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCceEEccCCC
Confidence 45677888899999999999999999999999999999999999988899999999999999999887543
No 7
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=99.33 E-value=1.3e-11 Score=76.30 Aligned_cols=64 Identities=23% Similarity=0.435 Sum_probs=58.0
Q ss_pred cceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCce
Q 036289 27 QLQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKSTGKRA 90 (149)
Q Consensus 27 ~~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~G~~a 90 (149)
.+.++.|.| ||+|.+|+.+|+++|.+++||..+.+++..++++|.. .++.++|.+.|+++||.+
T Consensus 3 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 70 (71)
T 2l3m_A 3 AMEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV 70 (71)
T ss_dssp SEEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred CcEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 466788999 9999999999999999999999999999999999873 367899999999999975
No 8
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=99.33 E-value=3.5e-12 Score=78.50 Aligned_cols=62 Identities=27% Similarity=0.559 Sum_probs=57.0
Q ss_pred EEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEc
Q 036289 32 DLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIW 93 (149)
Q Consensus 32 ~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a~~~ 93 (149)
.|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|.+..+.++|.+.|+++||.+...
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~ 65 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKAEVL 65 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHHTTTCEEEEC
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHHHcCCCcEec
Confidence 5889 9999999999999999999999999999999999976678999999999999987653
No 9
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=99.33 E-value=3.4e-12 Score=77.21 Aligned_cols=60 Identities=22% Similarity=0.427 Sum_probs=56.3
Q ss_pred EEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCce
Q 036289 31 VDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRA 90 (149)
Q Consensus 31 v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a 90 (149)
..|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|.+..+.++|.+.|+++||.+
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~G~~~ 63 (64)
T 2xmm_A 3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGYEV 63 (64)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHHHTTCCC
T ss_pred EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence 46899 9999999999999999999999999999999999997788999999999999975
No 10
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=99.32 E-value=1.8e-11 Score=75.74 Aligned_cols=66 Identities=30% Similarity=0.474 Sum_probs=58.7
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEc
Q 036289 28 LQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKSTGKRAEIW 93 (149)
Q Consensus 28 ~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~G~~a~~~ 93 (149)
+.++.|.| ||+|.+|+.+|++.|.+++||.++.+|+..++++|.. ..+.++|.+.|+++||.+.+.
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 71 (72)
T 1osd_A 2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVK 71 (72)
T ss_dssp EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEEC
T ss_pred ceEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEec
Confidence 35678999 9999999999999999999999999999999999874 257889999999999987653
No 11
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=99.31 E-value=2.4e-11 Score=74.79 Aligned_cols=64 Identities=22% Similarity=0.447 Sum_probs=57.0
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec--CCHHHHHHHHHhcCCceEE
Q 036289 29 QTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY--VEANKVLKKAKSTGKRAEI 92 (149)
Q Consensus 29 ~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~--~~~~~I~~~I~~~G~~a~~ 92 (149)
.++.|.| ||+|.+|+.+|+++|.+++||.++.+|+..++++|..+ ++.++|.+.|+++||.+.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~ 69 (71)
T 2xmw_A 3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARV 69 (71)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHHHHTCEEEE
T ss_pred cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHHHcCCCcee
Confidence 4567999 99999999999999999999999999999999998743 6788899999999998764
No 12
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=99.30 E-value=4.4e-12 Score=83.32 Aligned_cols=66 Identities=20% Similarity=0.266 Sum_probs=58.8
Q ss_pred cCcceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCce
Q 036289 25 KKQLQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRA 90 (149)
Q Consensus 25 ~~~~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a 90 (149)
...+.++.|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|...++.++|.+.|+++||.+
T Consensus 18 ~~~~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~~~Gy~~ 84 (85)
T 2k2p_A 18 YFQGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAGYTP 84 (85)
T ss_dssp ----CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHHHTTCCC
T ss_pred cccccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence 34567788999 9999999999999999999999999999999999998788999999999999975
No 13
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=99.29 E-value=3.6e-11 Score=75.17 Aligned_cols=66 Identities=29% Similarity=0.325 Sum_probs=58.3
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecC-CHHHHHHHHHhcCCceEEc
Q 036289 28 LQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYV-EANKVLKKAKSTGKRAEIW 93 (149)
Q Consensus 28 ~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~-~~~~I~~~I~~~G~~a~~~ 93 (149)
|.++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+. ..++|.+.|+.+||.+...
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~~~Gy~~~~~ 69 (73)
T 1mwy_A 2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRDE 69 (73)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCEEEEC
T ss_pred CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHHHcCCccccc
Confidence 56778999 999999999999999999999999999999999998542 3678899999999987653
No 14
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=99.28 E-value=1.9e-11 Score=78.97 Aligned_cols=70 Identities=17% Similarity=0.346 Sum_probs=62.2
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEccCCC
Q 036289 28 LQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY---VEANKVLKKAKSTGKRAEIWPYVP 97 (149)
Q Consensus 28 ~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~---~~~~~I~~~I~~~G~~a~~~~~~~ 97 (149)
..++.|.| ||+|.+|+.+|+++|.+++||..+++|+..++++|..+ ++.++|.+.|+.+||.+.+.....
T Consensus 8 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~ 81 (84)
T 1q8l_A 8 EVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQPK 81 (84)
T ss_dssp CEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCCTT
T ss_pred ceEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEecCCcc
Confidence 45678999 99999999999999999999999999999999999743 578899999999999988877543
No 15
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=99.27 E-value=3.2e-11 Score=74.54 Aligned_cols=64 Identities=17% Similarity=0.309 Sum_probs=57.7
Q ss_pred EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEc
Q 036289 30 TVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY---VEANKVLKKAKSTGKRAEIW 93 (149)
Q Consensus 30 ~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~---~~~~~I~~~I~~~G~~a~~~ 93 (149)
+..|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+ ++.++|.+.|+++||.+.+.
T Consensus 4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 71 (72)
T 1aw0_A 4 ETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS 71 (72)
T ss_dssp EEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEeC
Confidence 567999 99999999999999999999999999999999999743 57889999999999987653
No 16
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=99.27 E-value=5.1e-11 Score=74.59 Aligned_cols=65 Identities=15% Similarity=0.379 Sum_probs=58.6
Q ss_pred EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEcc
Q 036289 30 TVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY---VEANKVLKKAKSTGKRAEIWP 94 (149)
Q Consensus 30 ~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~---~~~~~I~~~I~~~G~~a~~~~ 94 (149)
++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+ ++.++|.+.|+++||.+.+..
T Consensus 3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (75)
T 3cjk_B 3 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN 71 (75)
T ss_dssp EEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEeec
Confidence 467999 99999999999999999999999999999999999743 578899999999999887654
No 17
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=99.27 E-value=3.8e-11 Score=74.71 Aligned_cols=67 Identities=18% Similarity=0.378 Sum_probs=59.8
Q ss_pred cceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEc
Q 036289 27 QLQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKSTGKRAEIW 93 (149)
Q Consensus 27 ~~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~G~~a~~~ 93 (149)
++.+..|.| ||+|.+|+.+|++.|.+++||..+.+|+..+++.|.. ..+.++|.+.|+.+||.+..+
T Consensus 4 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 74 (76)
T 1opz_A 4 EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVIE 74 (76)
T ss_dssp CCEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEECC
T ss_pred cceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceecC
Confidence 356778999 9999999999999999999999999999999999873 357889999999999987655
No 18
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=99.27 E-value=2.8e-11 Score=79.76 Aligned_cols=68 Identities=21% Similarity=0.285 Sum_probs=60.3
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhc---CCceEEccCC
Q 036289 29 QTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKST---GKRAEIWPYV 96 (149)
Q Consensus 29 ~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~---G~~a~~~~~~ 96 (149)
.++.|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|.. .++.++|.++|+++ ||++.++.+.
T Consensus 3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~~ 77 (90)
T 2g9o_A 3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSEV 77 (90)
T ss_dssp EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCCC
T ss_pred cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCCC
Confidence 3567999 9999999999999999999999999999999999974 35788999999999 5999887754
No 19
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=99.27 E-value=5e-11 Score=72.24 Aligned_cols=62 Identities=27% Similarity=0.442 Sum_probs=55.9
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCce
Q 036289 29 QTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKSTGKRA 90 (149)
Q Consensus 29 ~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~G~~a 90 (149)
.+..|.| ||+|.+|+.+|++.|..++||..+.+++..++++|.. ..+.+.|.+.|+.+||.+
T Consensus 2 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 67 (69)
T 2qif_A 2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV 67 (69)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence 4567999 9999999999999999999999999999999999873 367889999999999975
No 20
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=99.24 E-value=2e-11 Score=77.06 Aligned_cols=67 Identities=15% Similarity=0.243 Sum_probs=60.3
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEcc
Q 036289 28 LQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY---VEANKVLKKAKSTGKRAEIWP 94 (149)
Q Consensus 28 ~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~---~~~~~I~~~I~~~G~~a~~~~ 94 (149)
|.++.|.| ||+|.+|+.+|+++|.+++||..+.+++..++++|... ++.++|.+.|+.+||.+.++.
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 72 (77)
T 1y3j_A 2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIE 72 (77)
T ss_dssp CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEES
T ss_pred CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEECC
Confidence 56778999 99999999999999999999999999999999999743 578899999999999987754
No 21
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=99.23 E-value=5.5e-11 Score=73.48 Aligned_cols=65 Identities=26% Similarity=0.386 Sum_probs=58.8
Q ss_pred EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe--cCCHHHHHHHHHhcCCceEEcc
Q 036289 30 TVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG--YVEANKVLKKAKSTGKRAEIWP 94 (149)
Q Consensus 30 ~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g--~~~~~~I~~~I~~~G~~a~~~~ 94 (149)
++.|.| ||+|.+|+.+|++.|.+++||..+.+++..++++|.. .++.++|.+.|++.||.+.++.
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~~ 70 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR 70 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHCCCceEEcc
Confidence 457899 9999999999999999999999999999999999874 3578899999999999988765
No 22
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=99.23 E-value=4.1e-11 Score=75.85 Aligned_cols=67 Identities=15% Similarity=0.380 Sum_probs=60.0
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEcc
Q 036289 28 LQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY---VEANKVLKKAKSTGKRAEIWP 94 (149)
Q Consensus 28 ~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~---~~~~~I~~~I~~~G~~a~~~~ 94 (149)
..++.|.| ||+|.+|+.+|+++|.+++||..+.+++..++++|..+ ++.++|.+.|+++||.+.+..
T Consensus 7 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 77 (79)
T 1kvi_A 7 VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN 77 (79)
T ss_dssp CEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEECC
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEecC
Confidence 55678999 99999999999999999999999999999999999743 578899999999999887654
No 23
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=99.23 E-value=5.8e-11 Score=72.45 Aligned_cols=61 Identities=31% Similarity=0.554 Sum_probs=55.7
Q ss_pred EEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEE
Q 036289 32 DLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY---VEANKVLKKAKSTGKRAEI 92 (149)
Q Consensus 32 ~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~---~~~~~I~~~I~~~G~~a~~ 92 (149)
.|.| ||+|.+|+.+|++.|.+++||..+.+|+..++++|..+ .+.++|.+.|++.||.+++
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 67 (68)
T 1cpz_A 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEV 67 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEE
T ss_pred EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCccc
Confidence 5889 99999999999999999999999999999999999743 5788999999999998765
No 24
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=99.21 E-value=7.2e-11 Score=72.60 Aligned_cols=62 Identities=23% Similarity=0.407 Sum_probs=55.9
Q ss_pred EEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec--CCHHHHHHHHHhcCCceEEc
Q 036289 32 DLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY--VEANKVLKKAKSTGKRAEIW 93 (149)
Q Consensus 32 ~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~--~~~~~I~~~I~~~G~~a~~~ 93 (149)
.|.| ||+|.+|+.+|+++|.+++||..+++|+..++++|..+ ...++|.+.|+++||.+.+.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~ 67 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLGYKATLA 67 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHHTTTSEEECC
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHHHCCCceEeC
Confidence 4789 99999999999999999999999999999999998733 57889999999999987653
No 25
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=99.21 E-value=8e-11 Score=74.31 Aligned_cols=68 Identities=13% Similarity=0.317 Sum_probs=60.5
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEccC
Q 036289 28 LQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKSTGKRAEIWPY 95 (149)
Q Consensus 28 ~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~G~~a~~~~~ 95 (149)
|.+..|.| ||+|.+|+.+|++.|.+++||..+.+|+..+++.|.. ..+.++|.+.|+.+||.+.++..
T Consensus 2 m~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~ 73 (80)
T 1jww_A 2 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGE 73 (80)
T ss_dssp CEEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEECCS
T ss_pred ceEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEecCc
Confidence 45678999 9999999999999999999999999999999999873 35788999999999999887663
No 26
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=99.21 E-value=1.5e-10 Score=76.56 Aligned_cols=71 Identities=21% Similarity=0.225 Sum_probs=63.1
Q ss_pred cCcceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEccC
Q 036289 25 KKQLQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY---VEANKVLKKAKSTGKRAEIWPY 95 (149)
Q Consensus 25 ~~~~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~---~~~~~I~~~I~~~G~~a~~~~~ 95 (149)
...+.++.|.| ||+|.+|+.+|+++|..++||..+.+++..+++.|... ++.+.|.+.|+.+||.+.+...
T Consensus 12 ~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 86 (95)
T 2kkh_A 12 VKKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVRVN 86 (95)
T ss_dssp SSCSEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCC
T ss_pred ccceEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEecC
Confidence 34577889999 99999999999999999999999999999999999743 5788999999999999887664
No 27
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=99.21 E-value=7.6e-11 Score=71.51 Aligned_cols=61 Identities=16% Similarity=0.359 Sum_probs=54.8
Q ss_pred EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec--CCHHHHHHHHHhcCCce
Q 036289 30 TVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY--VEANKVLKKAKSTGKRA 90 (149)
Q Consensus 30 ~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~--~~~~~I~~~I~~~G~~a 90 (149)
+..|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+ .+.++|.+.|+++||.+
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~ 65 (66)
T 1yg0_A 2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQEV 65 (66)
T ss_dssp EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHHTCCC
T ss_pred eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCCc
Confidence 356889 99999999999999999999999999999999999743 47888999999999864
No 28
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=99.19 E-value=6.3e-11 Score=72.47 Aligned_cols=64 Identities=22% Similarity=0.401 Sum_probs=56.9
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceE
Q 036289 28 LQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKSTGKRAE 91 (149)
Q Consensus 28 ~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~G~~a~ 91 (149)
+.+..|.| ||+|.+|+.+|++.|.+++||..+.+++..++++|.. ..+.++|.+.++.+||.+.
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 69 (71)
T 2ldi_A 2 LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLA 69 (71)
T ss_dssp CEEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEEE
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence 45667999 9999999999999999999999999999999999873 3567889999999999764
No 29
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=99.18 E-value=5e-11 Score=73.51 Aligned_cols=60 Identities=30% Similarity=0.473 Sum_probs=54.2
Q ss_pred EEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEE
Q 036289 31 VDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEI 92 (149)
Q Consensus 31 v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a~~ 92 (149)
..|.| ||+|.+|+.+|+++|.++ ||..+.+|+..++++|..+.+ ++|.+.|+++||.+..
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~~~Gy~~~~ 63 (67)
T 2kyz_A 3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLEEIDYPVES 63 (67)
T ss_dssp EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHHTTTCCCCB
T ss_pred EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHHHcCCceee
Confidence 56899 999999999999999999 999999999999999986544 8899999999997654
No 30
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=99.16 E-value=1.4e-10 Score=72.17 Aligned_cols=64 Identities=16% Similarity=0.343 Sum_probs=56.8
Q ss_pred EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEc
Q 036289 30 TVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY---VEANKVLKKAKSTGKRAEIW 93 (149)
Q Consensus 30 ~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~---~~~~~I~~~I~~~G~~a~~~ 93 (149)
++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+ ++.++|.+.|+.+||.+.+.
T Consensus 5 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 72 (75)
T 1yjr_A 5 VLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSLV 72 (75)
T ss_dssp CEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEES
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCceee
Confidence 457899 99999999999999999999999999999999999743 45688999999999987654
No 31
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=99.15 E-value=2.4e-10 Score=78.28 Aligned_cols=66 Identities=24% Similarity=0.417 Sum_probs=59.5
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEc
Q 036289 28 LQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY---VEANKVLKKAKSTGKRAEIW 93 (149)
Q Consensus 28 ~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~---~~~~~I~~~I~~~G~~a~~~ 93 (149)
+.++.|.| ||+|.+|+.+|+++|.+++||..+++|+..++++|..+ ++.++|.+.|+.+||.+...
T Consensus 7 ~~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~~~Gy~~~~~ 76 (111)
T 2ofg_X 7 LKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLAEP 76 (111)
T ss_dssp CEEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHHTTTCCEECC
T ss_pred ceEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHHHcCCeeeec
Confidence 66788999 99999999999999999999999999999999999743 57889999999999987643
No 32
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=99.14 E-value=2.1e-10 Score=81.14 Aligned_cols=68 Identities=13% Similarity=0.317 Sum_probs=61.5
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEccC
Q 036289 28 LQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKSTGKRAEIWPY 95 (149)
Q Consensus 28 ~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~G~~a~~~~~ 95 (149)
..++.|.| ||+|.+|+.+|+++|.+++||.++.+|+..++++|.. .+++++|.+.|+++||.+.++..
T Consensus 73 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 144 (151)
T 1p6t_A 73 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGE 144 (151)
T ss_dssp CEEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCS
T ss_pred ccccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcCc
Confidence 35678999 9999999999999999999999999999999999983 36889999999999999887664
No 33
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.13 E-value=2.1e-10 Score=80.80 Aligned_cols=65 Identities=15% Similarity=0.334 Sum_probs=59.0
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEc
Q 036289 29 QTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY---VEANKVLKKAKSTGKRAEIW 93 (149)
Q Consensus 29 ~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~---~~~~~I~~~I~~~G~~a~~~ 93 (149)
.++.|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|..+ ++.++|.+.|+++||++.++
T Consensus 80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 148 (149)
T 2ew9_A 80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASLA 148 (149)
T ss_dssp SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTCEEECC
T ss_pred ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCCceEec
Confidence 4678999 99999999999999999999999999999999999843 57899999999999987654
No 34
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.10 E-value=6e-10 Score=85.77 Aligned_cols=70 Identities=21% Similarity=0.375 Sum_probs=63.6
Q ss_pred eEEEEEEcCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEccCCCC
Q 036289 29 QTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWPYVPY 98 (149)
Q Consensus 29 ~~v~l~Vgm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a~~~~~~~~ 98 (149)
.+++|.|.|+|.+|+.+|+++|.+++||.++++|+..++++|.+..++++|.++|+++||++.++...+.
T Consensus 6 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~~~~~ 75 (222)
T 1qup_A 6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGKP 75 (222)
T ss_dssp EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEECCSCT
T ss_pred eEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHHHcCCccccccCCCc
Confidence 3456778899999999999999999999999999999999999888999999999999999998876544
No 35
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=99.04 E-value=4.2e-10 Score=69.92 Aligned_cols=59 Identities=22% Similarity=0.460 Sum_probs=50.9
Q ss_pred EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEE
Q 036289 30 TVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEI 92 (149)
Q Consensus 30 ~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a~~ 92 (149)
+..|.| ||+|.+|+.+|+++|.+++||..+++|+..++++|..... .+.|+++||.+.+
T Consensus 4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~~~Gy~~~~ 63 (71)
T 2aj0_A 4 KTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVEQAGAFEHL 63 (71)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHHHHHTTTTC
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHHHhCCCccc
Confidence 567999 9999999999999999999999999999999999986654 4467788886543
No 36
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=99.02 E-value=1.5e-09 Score=81.16 Aligned_cols=67 Identities=16% Similarity=0.328 Sum_probs=59.9
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEccC
Q 036289 29 QTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKSTGKRAEIWPY 95 (149)
Q Consensus 29 ~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~G~~a~~~~~ 95 (149)
.++.|.| ||+|.+|+.+|+++|.+++||..+.+++..++++|.. .++.++|.+.|+++||.+.++..
T Consensus 122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 192 (202)
T 2rop_A 122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVVSE 192 (202)
T ss_dssp EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC--
T ss_pred eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEcCC
Confidence 5678999 9999999999999999999999999999999999974 36789999999999999888764
No 37
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.98 E-value=2.2e-09 Score=83.92 Aligned_cols=70 Identities=21% Similarity=0.375 Sum_probs=63.1
Q ss_pred eEEEEEEcCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEccCCCC
Q 036289 29 QTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWPYVPY 98 (149)
Q Consensus 29 ~~v~l~Vgm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a~~~~~~~~ 98 (149)
.+++|.|.|+|.+|+.+|+++|.+++||.++++|+..++++|.+..++++|.++|+++||++.++...+.
T Consensus 7 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~~~~ 76 (249)
T 1jk9_B 7 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGKP 76 (249)
T ss_dssp EEEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHTTTCCCEEEEESST
T ss_pred eeEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHHHhCCCcccccCCcc
Confidence 3456777899999999999999999999999999999999999888999999999999999988765543
No 38
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.95 E-value=3.1e-09 Score=74.70 Aligned_cols=67 Identities=18% Similarity=0.269 Sum_probs=59.9
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEcc
Q 036289 28 LQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKSTGKRAEIWP 94 (149)
Q Consensus 28 ~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~G~~a~~~~ 94 (149)
|+++.|.| ||+|.+|+.+|+++|.+++||..+.+++..+++.|.. ..+.++|.+.|+..||.+.+..
T Consensus 3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~ 73 (149)
T 2ew9_A 3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVME 73 (149)
T ss_dssp CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECS
T ss_pred cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEeec
Confidence 66788999 9999999999999999999999999999999999874 3577899999999999887643
No 39
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.69 E-value=9e-08 Score=67.40 Aligned_cols=63 Identities=17% Similarity=0.405 Sum_probs=55.4
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCce
Q 036289 28 LQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKSTGKRA 90 (149)
Q Consensus 28 ~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~G~~a 90 (149)
+.+..|.| ||+|.+|+.+|++.|.+++||..+.+++..+++.|.. ..+...+.+.++..||.+
T Consensus 5 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 71 (151)
T 1p6t_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV 71 (151)
T ss_dssp CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred ceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCcc
Confidence 34567999 9999999999999999999999999999999998863 357888999999999865
No 40
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.64 E-value=7e-08 Score=71.90 Aligned_cols=65 Identities=17% Similarity=0.406 Sum_probs=55.7
Q ss_pred cceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhc---CCceE
Q 036289 27 QLQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY---VEANKVLKKAKST---GKRAE 91 (149)
Q Consensus 27 ~~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~---~~~~~I~~~I~~~---G~~a~ 91 (149)
.+.++.|.| ||+|.+|+.+|+++|.+++||..+.+++..++++|... ++.++|.+.|+.+ ||.+.
T Consensus 18 ~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~~~gg~~v~ 89 (202)
T 2rop_A 18 HVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEALPPGNFKVS 89 (202)
T ss_dssp --CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTSSSSCSEEE
T ss_pred ccEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHhccCCeEEE
Confidence 356778999 99999999999999999999999999999999999743 6788899999988 36553
No 41
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.60 E-value=1.1e-07 Score=83.85 Aligned_cols=64 Identities=20% Similarity=0.293 Sum_probs=58.0
Q ss_pred EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEc
Q 036289 30 TVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKSTGKRAEIW 93 (149)
Q Consensus 30 ~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~G~~a~~~ 93 (149)
+++|.| ||+|.+|+.+|+++|.+++||.++++|+.+++++|.. ..+.++|.++|++.||++...
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~~~ 70 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVVDE 70 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEESSC
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCccccc
Confidence 357999 9999999999999999999999999999999999973 368999999999999987543
No 42
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=89.98 E-value=1.4 Score=29.30 Aligned_cols=67 Identities=15% Similarity=0.215 Sum_probs=47.1
Q ss_pred cceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEe-----cCCCEE--EEEec-CCHHHHHHHHHhcCCceEEcc
Q 036289 27 QLQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEIN-----RKQQKV--SVTGY-VEANKVLKKAKSTGKRAEIWP 94 (149)
Q Consensus 27 ~~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vd-----l~~~~v--~V~g~-~~~~~I~~~I~~~G~~a~~~~ 94 (149)
..+++.|.| ..+-+.- -.+-+.|.+++||..|++. ..+..+ +|+|. ++.++|.++|++.|-.+.-..
T Consensus 5 ~iRRlVLDVlKPh~P~i-vdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~GgvIHSID 80 (100)
T 3bpd_A 5 GLRRLVLDVLKPHEPKT-IVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGVIHSVD 80 (100)
T ss_dssp SEEEEEEEEEEESCSCH-HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEEEEEE
T ss_pred cceEEEEEecCCCCCCH-HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEeee
Confidence 356777777 5444443 4566779999999988754 334433 44565 999999999999997665443
No 43
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=88.36 E-value=2.6 Score=27.84 Aligned_cols=66 Identities=17% Similarity=0.278 Sum_probs=46.6
Q ss_pred cceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEe-----cCCCEE--EEEec-CCHHHHHHHHHhcCCceEEc
Q 036289 27 QLQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEIN-----RKQQKV--SVTGY-VEANKVLKKAKSTGKRAEIW 93 (149)
Q Consensus 27 ~~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vd-----l~~~~v--~V~g~-~~~~~I~~~I~~~G~~a~~~ 93 (149)
..+++.|.| ..+-+.- -.+-+.|.+++||..|++. ..+..+ +|+|. ++.++|.++|++.|-.+.-.
T Consensus 5 ~irRlVLDVlKPh~p~i-~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg~IHSI 79 (97)
T 2raq_A 5 GLIRIVLDILKPHEPII-PEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGSIHSV 79 (97)
T ss_dssp SEEEEEEEEECCSCSCH-HHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTCEEEEE
T ss_pred CceEEEEEecCCCCCCH-HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEee
Confidence 366777888 5554444 4566678889998887753 444544 44565 99999999999999766543
No 44
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=87.70 E-value=3 Score=27.47 Aligned_cols=65 Identities=17% Similarity=0.279 Sum_probs=45.1
Q ss_pred ceEEEEEE--cCcChhHHHHHHHHHhCCCCeeEEEEe-----cCCCEE--EEEec-CCHHHHHHHHHhcCCceEEc
Q 036289 28 LQTVDLKV--RMDCDGCELKVKNAVSSLSGVKSVEIN-----RKQQKV--SVTGY-VEANKVLKKAKSTGKRAEIW 93 (149)
Q Consensus 28 ~~~v~l~V--gm~C~~C~~kV~k~L~~~~GV~~v~vd-----l~~~~v--~V~g~-~~~~~I~~~I~~~G~~a~~~ 93 (149)
.+++.|.| .++-+.- -.+-+.|.+++||..|++. ..+..+ +|+|. ++.++|.++|++.|-.+.-.
T Consensus 4 irRlVLDVlKP~h~P~i-vd~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~Gg~IHSI 78 (96)
T 2x3d_A 4 IRRLVLDVLKPIRGTSI-VDLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEGCAIHSI 78 (96)
T ss_dssp EEEEEEEEEEESSSSCH-HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTTCEEEEE
T ss_pred eEEEEEEcccCCCCCCH-HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEee
Confidence 45666766 3355544 3566778999999988754 333433 45565 99999999999999766543
No 45
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=83.34 E-value=5.3 Score=25.00 Aligned_cols=55 Identities=7% Similarity=0.068 Sum_probs=40.8
Q ss_pred EEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEE--ecCCHHHHHHHHHhcCCceEEcc
Q 036289 31 VDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT--GYVEANKVLKKAKSTGKRAEIWP 94 (149)
Q Consensus 31 v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~--g~~~~~~I~~~I~~~G~~a~~~~ 94 (149)
.++.+ |+.|+.-.-+++++|.+++. .+.+.|. .......|.+.+++.|+.+....
T Consensus 11 ~~lD~rGl~CP~Pvl~~kkal~~l~~---------G~~l~V~~dd~~a~~di~~~~~~~G~~~~~~~ 68 (82)
T 3lvj_C 11 HTLDALGLRCPEPVMMVRKTVRNMQP---------GETLLIIADDPATTRDIPGFCTFMEHELVAKE 68 (82)
T ss_dssp EEEECTTCCTTHHHHHHHHHHHTSCT---------TCEEEEEECCTTHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEECCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEEEE
Confidence 56888 99999999999999998732 1233333 23456788889999999876653
No 46
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=81.17 E-value=6 Score=25.84 Aligned_cols=55 Identities=15% Similarity=0.138 Sum_probs=41.4
Q ss_pred EEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe--cCCHHHHHHHHHhcCCceEEcc
Q 036289 31 VDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG--YVEANKVLKKAKSTGKRAEIWP 94 (149)
Q Consensus 31 v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g--~~~~~~I~~~I~~~G~~a~~~~ 94 (149)
.++.+ |+.|+.-.-+++++|.+++. .+.+.|.. ......|.+.++..|+.+....
T Consensus 27 ~~LD~rGl~CP~Pvl~tkkaL~~l~~---------Ge~L~Vl~dd~~a~~dI~~~~~~~G~~v~~~e 84 (98)
T 1jdq_A 27 KTLDVRGEVCPVPDVETKRALQNMKP---------GEILEVWIDYPMSKERIPETVKKLGHEVLEIE 84 (98)
T ss_dssp EEEECSSCCSSHHHHHHHHHHHTCCT---------TCEEEEEESSCTHHHHHHHHHHHSSCCEEEEE
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEEEE
Confidence 56888 99999999999999998732 22344432 2446888999999999886554
No 47
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=81.17 E-value=2.5 Score=27.68 Aligned_cols=37 Identities=27% Similarity=0.503 Sum_probs=27.6
Q ss_pred EEEEEEcCcChhH------HHHHHHHHhCCCCeeEEEEecCCC
Q 036289 30 TVDLKVRMDCDGC------ELKVKNAVSSLSGVKSVEINRKQQ 66 (149)
Q Consensus 30 ~v~l~Vgm~C~~C------~~kV~k~L~~~~GV~~v~vdl~~~ 66 (149)
++.+.+.+.+++| ...|+.+|..++||.++++++...
T Consensus 42 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~~~ 84 (103)
T 3cq1_A 42 RAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVTFE 84 (103)
T ss_dssp EEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEECCS
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEecC
Confidence 4556666677777 567899999999999988875443
No 48
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=77.62 E-value=4.2 Score=26.62 Aligned_cols=55 Identities=15% Similarity=0.078 Sum_probs=39.9
Q ss_pred EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEE--ecCCHHHHHHHHHhcCCceEEc
Q 036289 30 TVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT--GYVEANKVLKKAKSTGKRAEIW 93 (149)
Q Consensus 30 ~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~--g~~~~~~I~~~I~~~G~~a~~~ 93 (149)
..++.+ |+.|+.-.-+++++|.+++.- +.+.|. .....+.|.+.++..|+.+...
T Consensus 27 ~~~LD~rGl~CP~PvlktkkaL~~l~~G---------e~L~Vl~dd~~a~~dIp~~~~~~G~~v~~~ 84 (97)
T 1je3_A 27 DYRLDMVGEPCPYPAVATLEAMPQLKKG---------EILEVVSDCPQSINNIPLDARNHGYTVLDI 84 (97)
T ss_dssp EEEECSBCCSSSSSTHHHHHHTTTCCSS---------CEEEEEEBCSSSSCHHHHHHHHHTCSEEEE
T ss_pred CeEEeCCCCCCCHHHHHHHHHHHcCCCC---------CEEEEEECCcchHHHHHHHHHHCCCEEEEE
Confidence 456788 999999999999999987421 223333 2244567888899999988654
No 49
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=76.85 E-value=3.9 Score=26.65 Aligned_cols=37 Identities=22% Similarity=0.380 Sum_probs=26.2
Q ss_pred EEEEEEcCcChhH------HHHHHHHHhCCCCeeEEEEecCCC
Q 036289 30 TVDLKVRMDCDGC------ELKVKNAVSSLSGVKSVEINRKQQ 66 (149)
Q Consensus 30 ~v~l~Vgm~C~~C------~~kV~k~L~~~~GV~~v~vdl~~~ 66 (149)
++.+.+.+.+++| ...++.+|..++||.++++++...
T Consensus 43 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~l~~~ 85 (103)
T 1uwd_A 43 NVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELTFD 85 (103)
T ss_dssp EEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEECCS
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCcceEEEEEecC
Confidence 4555555555555 456788999999999988875443
No 50
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=75.82 E-value=5.3 Score=25.44 Aligned_cols=53 Identities=21% Similarity=0.269 Sum_probs=39.9
Q ss_pred EEEE-cCcChhHHHHHHHHHhCCC--CeeEEEEecCCCEEEEEe--cCCHHHHHHHHHhcCCceEEcc
Q 036289 32 DLKV-RMDCDGCELKVKNAVSSLS--GVKSVEINRKQQKVSVTG--YVEANKVLKKAKSTGKRAEIWP 94 (149)
Q Consensus 32 ~l~V-gm~C~~C~~kV~k~L~~~~--GV~~v~vdl~~~~v~V~g--~~~~~~I~~~I~~~G~~a~~~~ 94 (149)
++.. |+.|+.-.-+++++|.+++ | +.+.|.. ....+.|...++..|+.+....
T Consensus 3 ~lD~rGl~CP~Pvl~~kkal~~l~~~G----------~~L~V~~dd~~a~~dI~~~~~~~G~~v~~~~ 60 (87)
T 3hz7_A 3 TIDALGQVCPIPVIRAKKALAELGEAG----------GVVTVLVDNDISRQNLQKMAEGMGYQSEYLE 60 (87)
T ss_dssp EEECTTCCTTHHHHHHHHHHHTTGGGC----------CEEEEEESSHHHHHHHHHHHHHHTCEEEEEE
T ss_pred EEEcCCCCCCHHHHHHHHHHHhccCCC----------CEEEEEECCccHHHHHHHHHHHCCCEEEEEE
Confidence 4677 9999999999999999883 3 2333332 2456788889999999886654
No 51
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=68.46 E-value=21 Score=23.07 Aligned_cols=46 Identities=7% Similarity=0.146 Sum_probs=31.0
Q ss_pred hhHHHHHHHHHhCCCCeeEEEEecCCCEEEEE-ecCCHHHHHHHHHh
Q 036289 40 DGCELKVKNAVSSLSGVKSVEINRKQQKVSVT-GYVEANKVLKKAKS 85 (149)
Q Consensus 40 ~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~-g~~~~~~I~~~I~~ 85 (149)
++=...|...|.+++|+.-..++-..+++.|+ ...+.+++.+.|.+
T Consensus 16 p~~~~~V~~~L~~ipgvEi~~~~~~~GkiVV~iEa~~~~~l~~~i~~ 62 (95)
T 2jsx_A 16 SERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIES 62 (95)
T ss_dssp TTSHHHHHHHHTTSTTEEEEEEETTTTEEEEEEEESSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCeEEEEecCCCCCEEEEEEeCCHHHHHHHHHH
Confidence 34468899999999999444456667887766 33456666555543
No 52
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=66.71 E-value=4.9 Score=26.52 Aligned_cols=37 Identities=22% Similarity=0.385 Sum_probs=26.0
Q ss_pred EEEEEEcCcChhH------HHHHHHHH-hCCCCeeEEEEecCCC
Q 036289 30 TVDLKVRMDCDGC------ELKVKNAV-SSLSGVKSVEINRKQQ 66 (149)
Q Consensus 30 ~v~l~Vgm~C~~C------~~kV~k~L-~~~~GV~~v~vdl~~~ 66 (149)
.+.+.+.+..++| ...|+.+| .+++||.++++++...
T Consensus 45 ~V~V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l~~~ 88 (108)
T 3lno_A 45 NAVITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNVVWN 88 (108)
T ss_dssp CEEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEECCS
T ss_pred eEEEEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEEEec
Confidence 3455555555555 56788888 8999999888876544
No 53
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=52.48 E-value=53 Score=24.28 Aligned_cols=51 Identities=22% Similarity=0.177 Sum_probs=36.7
Q ss_pred ceEEEEEEcCcChhHHHHHHHHHhCCCCeeEEEEecCCCE-------------------EEEEe---cCCHHHHHHHH
Q 036289 28 LQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQK-------------------VSVTG---YVEANKVLKKA 83 (149)
Q Consensus 28 ~~~v~l~Vgm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~-------------------v~V~g---~~~~~~I~~~I 83 (149)
++++.|. .+|-+-++..+.+++||.++.+-...+. |.|.- .++.++|++..
T Consensus 43 ~~~a~fa-----gGCFWg~E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp~~isy~~LL~~F 115 (199)
T 1fvg_A 43 TQMAVFG-----MGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVF 115 (199)
T ss_dssp CEEEEEE-----ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHH
T ss_pred ceEEEEe-----cCCeeeeHHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECCCcCCHHHHHHHH
Confidence 4555554 5777778888999999999998876654 44442 26777877765
No 54
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=47.25 E-value=41 Score=24.16 Aligned_cols=44 Identities=14% Similarity=0.289 Sum_probs=34.0
Q ss_pred hhHHHHHHHHHhCCCCeeEEEEecCCC---------------EEEEEe---cCCHHHHHHHH
Q 036289 40 DGCELKVKNAVSSLSGVKSVEINRKQQ---------------KVSVTG---YVEANKVLKKA 83 (149)
Q Consensus 40 ~~C~~kV~k~L~~~~GV~~v~vdl~~~---------------~v~V~g---~~~~~~I~~~I 83 (149)
.+|-+-++..+.+++||.++.+-...+ .|.|+- .++.++|++..
T Consensus 9 gGCFWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp~~isy~~LL~~F 70 (168)
T 4gwb_A 9 GGCFWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDPERISYRRILELF 70 (168)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECTTTCCHHHHHHHH
T ss_pred ccCccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECCCCCCHHHHHHHH
Confidence 578888899999999999999987765 345552 37788888765
No 55
>1pav_A Hypothetical protein TA1170/TA1414; structural genomics, structure, fast NMR, semiautomated analysis; NMR {Thermoplasma acidophilum} SCOP: d.68.3.3
Probab=46.99 E-value=10 Score=23.18 Aligned_cols=52 Identities=12% Similarity=0.048 Sum_probs=37.9
Q ss_pred EEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe--cCCHHHHHHHHHhcCCceEE
Q 036289 32 DLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG--YVEANKVLKKAKSTGKRAEI 92 (149)
Q Consensus 32 ~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g--~~~~~~I~~~I~~~G~~a~~ 92 (149)
++.. |+.|+.-.-+++++|.+++. .+.+.|.. ......|.+.++..|+....
T Consensus 8 ~lD~rGl~CP~Pvl~~k~al~~l~~---------G~~L~V~~dd~~a~~di~~~~~~~G~~~~~ 62 (78)
T 1pav_A 8 VIDARGSYCPGPLMELIKAYKQAKV---------GEVISVYSTDAGTKKDAPAWIQKSGQELVG 62 (78)
T ss_dssp CCCBSSCSSCTTHHHHHHHHTTSCT---------TCCEECCBSSSCHHHHHHHHHHHHTEEECC
T ss_pred EEECCCCCCCHHHHHHHHHHHcCCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEE
Confidence 4677 99999999999999998732 22334432 23467888889999987754
No 56
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=45.75 E-value=72 Score=24.58 Aligned_cols=51 Identities=22% Similarity=0.242 Sum_probs=36.5
Q ss_pred ceEEEEEEcCcChhHHHHHHHHHhCCCCeeEEEEecCCCE-------------------EEEEe---cCCHHHHHHHH
Q 036289 28 LQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQK-------------------VSVTG---YVEANKVLKKA 83 (149)
Q Consensus 28 ~~~v~l~Vgm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~-------------------v~V~g---~~~~~~I~~~I 83 (149)
++++.|. .+|-+-+|..+.+++||.++.+-...+. |.|.- .++.++|++..
T Consensus 94 ~e~a~fA-----gGCFWgvE~~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YDP~~ISy~~LL~~F 166 (261)
T 2j89_A 94 QQFAQFG-----AGCFWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDPKECSFDTLIDVL 166 (261)
T ss_dssp CEEEEEE-----ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEECTTTSCHHHHHHHH
T ss_pred CeEEEEe-----cCCeeeeHHHHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHH
Confidence 4555554 5777888888999999999999876653 44552 26777877754
No 57
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=45.33 E-value=60 Score=23.85 Aligned_cols=44 Identities=18% Similarity=0.239 Sum_probs=32.8
Q ss_pred hhHHHHHHHHHhCCCCeeEEEEecCCCE-------------------EEEEe---cCCHHHHHHHH
Q 036289 40 DGCELKVKNAVSSLSGVKSVEINRKQQK-------------------VSVTG---YVEANKVLKKA 83 (149)
Q Consensus 40 ~~C~~kV~k~L~~~~GV~~v~vdl~~~~-------------------v~V~g---~~~~~~I~~~I 83 (149)
.+|-+-++..+..++||.++.+-...+. |.|.- .++.++|++..
T Consensus 9 gGCFWg~E~~F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yDp~~isy~~LL~~f 74 (193)
T 3bqh_A 9 GGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYF 74 (193)
T ss_dssp ESCHHHHHHHHHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEETTTCCHHHHHHHH
T ss_pred cCCeeehHHHHhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEECCCcCCHHHHHHHH
Confidence 5677888888999999999998766553 44442 36788887765
No 58
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=43.05 E-value=91 Score=23.19 Aligned_cols=51 Identities=16% Similarity=0.110 Sum_probs=36.0
Q ss_pred ceEEEEEEcCcChhHHHHHHHHHhCCCCeeEEEEecCCCE-------------------EEEEe---cCCHHHHHHHH
Q 036289 28 LQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQK-------------------VSVTG---YVEANKVLKKA 83 (149)
Q Consensus 28 ~~~v~l~Vgm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~-------------------v~V~g---~~~~~~I~~~I 83 (149)
++++.|. .+|-+-++..+.+++||.++.+-...+. |.|.- .++.++|++..
T Consensus 42 ~~~a~fa-----gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp~~isy~~LL~~F 114 (211)
T 1ff3_A 42 MEIAIFA-----MGXFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVF 114 (211)
T ss_dssp CEEEEEE-----CSSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHH
T ss_pred ceEEEEe-----cCCeEEehhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECCCcCCHHHHHHHH
Confidence 4555554 5677778888999999999998876442 44552 36778887765
No 59
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=40.29 E-value=81 Score=24.96 Aligned_cols=44 Identities=23% Similarity=0.277 Sum_probs=33.7
Q ss_pred hhHHHHHHHHHhCCCCeeEEEEecCCCE-----------------EEEEe---cCCHHHHHHHH
Q 036289 40 DGCELKVKNAVSSLSGVKSVEINRKQQK-----------------VSVTG---YVEANKVLKKA 83 (149)
Q Consensus 40 ~~C~~kV~k~L~~~~GV~~v~vdl~~~~-----------------v~V~g---~~~~~~I~~~I 83 (149)
.+|-+-++..+.+++||.++.+-...+. |.|+- .++.++|++..
T Consensus 9 gGCFWg~E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc~TGHaEaV~V~yDp~~isy~~LL~~f 72 (313)
T 3e0m_A 9 GGCFWGLEEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYDEKEVSLREILLYY 72 (313)
T ss_dssp CSCHHHHHHHHTTSTTEEEEEEEEESCSSSCCCTTTHHHHTCEEEEEEEECTTTSCHHHHHHHH
T ss_pred cCCchhhHHHHhhCCCeEEeecccCCCCCCCCChhhhccCCCeEEEEEEECCCcCCHHHHHHHH
Confidence 5788888999999999999998876554 44552 37788887755
No 60
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=38.52 E-value=40 Score=25.05 Aligned_cols=51 Identities=18% Similarity=0.208 Sum_probs=35.9
Q ss_pred ceEEEEEEcCcChhHHHHHHHHHhCCCCeeEEEEecCCC---------------EEEEEe---cCCHHHHHHHH
Q 036289 28 LQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQ---------------KVSVTG---YVEANKVLKKA 83 (149)
Q Consensus 28 ~~~v~l~Vgm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~---------------~v~V~g---~~~~~~I~~~I 83 (149)
++++.|. .+|-+-++..+..++||.++.+-...+ .|.|+- .++.++|++..
T Consensus 25 ~~~a~fa-----gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~~G~HaEaV~V~yDp~~iSy~~LL~~F 93 (203)
T 1nwa_A 25 NQKAILA-----GGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFDPTVTDYRTLLEFF 93 (203)
T ss_dssp CEEEEEE-----ESCHHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSCCTTCEEEEEEEECTTTCCHHHHHHHH
T ss_pred cceEEEe-----cCCeeeeHHHHhcCCCeEEEEeeecCCCCCCCChhhcCCceEEEEEEECCCcCCHHHHHHHH
Confidence 3455554 567777888899999999999887665 244542 26777777754
No 61
>3v4k_A DNA DC->DU-editing enzyme apobec-3G; antiviral defense, HOST-virus interaction, hydrola metal-binding, nucleus; HET: DNA; 1.38A {Homo sapiens} PDB: 3v4j_A* 3ir2_A* 2kem_A* 2jyw_A* 2kbo_A* 3e1u_A* 3iqs_A*
Probab=37.63 E-value=35 Score=25.35 Aligned_cols=65 Identities=15% Similarity=0.224 Sum_probs=40.6
Q ss_pred EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEccCCCC
Q 036289 30 TVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWPYVPY 98 (149)
Q Consensus 30 ~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a~~~~~~~~ 98 (149)
+++.-+ ---|..|+.+|-.-|...+.|. ..+-..++--. .-.-.+=+..|.++|.++.++.+..+
T Consensus 101 ~vTwy~SWSPC~~CA~~v~~FL~~~~~v~---L~If~aRLY~~-~~~~~~gLr~L~~aG~~v~iM~~~ef 166 (203)
T 3v4k_A 101 RVTCFTSWSPCFSCAQEMAKFISKNKHVS---LCIKTARIYDD-QGRCQEGLRTLAEAGAKISIMTYSEF 166 (203)
T ss_pred EEEEEEeCCChHHHHHHHHHHHhhCCCeE---EEEEEEeeccc-CchHHHHHHHHHHCCCeEEecCHHHH
Confidence 445556 4459999999999999888762 11111121111 22345566777788998888776444
No 62
>2k1h_A Uncharacterized protein Ser13; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Staphylococcus epidermidis}
Probab=31.83 E-value=98 Score=19.90 Aligned_cols=38 Identities=21% Similarity=0.253 Sum_probs=28.1
Q ss_pred HHHHHhCCCCeeEEEEecCCCEEEEE--ecCCHHHHHHHHHh
Q 036289 46 VKNAVSSLSGVKSVEINRKQQKVSVT--GYVEANKVLKKAKS 85 (149)
Q Consensus 46 V~k~L~~~~GV~~v~vdl~~~~v~V~--g~~~~~~I~~~I~~ 85 (149)
+-+.|-.++||.+|-+. ..=++|+ ...+++.|...|..
T Consensus 41 LA~~LF~i~gVk~Vf~g--~dFITVtK~~~~dW~~ikp~I~~ 80 (94)
T 2k1h_A 41 FINRLFEIEGVKSIFYV--LDFISIDKEDNANWNELLPQIEN 80 (94)
T ss_dssp HHHHHHTSTTEEEEEEE--TTEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhCCCCeeEEEEe--CCEEEEecCCCCCHHHHHHHHHH
Confidence 44556689999988775 6677887 45789888777653
No 63
>3vow_A Probable DNA DC->DU-editing enzyme apobec-3C; antiviral deffense, HOST-virus interaction, metal- HIV-1 VIF, BET, single domain, sivagm, hydrolase; 2.15A {Homo sapiens} PDB: 3vm8_A
Probab=28.27 E-value=71 Score=23.43 Aligned_cols=59 Identities=20% Similarity=0.329 Sum_probs=40.0
Q ss_pred EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEE-e---cC-C--HHHHHHHHHhcCCceEEccCCCC
Q 036289 30 TVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT-G---YV-E--ANKVLKKAKSTGKRAEIWPYVPY 98 (149)
Q Consensus 30 ~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~-g---~~-~--~~~I~~~I~~~G~~a~~~~~~~~ 98 (149)
+|+.-+ =--|..|+.+|-.-|.+.+.| +++|- . .. + -.+=+..|.++|-++.++.+..+
T Consensus 87 ~VTwy~SwSPC~~CA~~va~FL~~~~~v----------~L~If~aRLY~~~~~~~q~gLr~L~~~G~~v~iM~~~eF 153 (190)
T 3vow_A 87 QVTWYTSWSPCPDCAGEVAEFLARHSNV----------NLTIFTARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDF 153 (190)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHCTTE----------EEEEEEEECTTTTSHHHHHHHHHHHHHTCEEEECCHHHH
T ss_pred EEEEEEeCCchHHHHHHHHHHHHhCCCe----------EEEEEEEecccccCchHHHHHHHHHHCCCcEEEeChHHH
Confidence 455666 445999999999999988776 23332 1 11 2 24456667789999998876544
No 64
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=23.45 E-value=78 Score=19.26 Aligned_cols=32 Identities=6% Similarity=0.004 Sum_probs=20.6
Q ss_pred EEEEEcCcChhHH-----HHHHHHHhCCCCeeEEEEec
Q 036289 31 VDLKVRMDCDGCE-----LKVKNAVSSLSGVKSVEINR 63 (149)
Q Consensus 31 v~l~Vgm~C~~C~-----~kV~k~L~~~~GV~~v~vdl 63 (149)
+++-..-.|+.|. .++++.|... ||.-..+|+
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~~~-~i~~~~~di 40 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILDGK-RIQYQLVDI 40 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHHT-TCCCEEEET
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHHHC-CCceEEEEC
Confidence 3443456799997 7888888764 665444444
No 65
>2fi0_A Conserved domain protein; structural genomics,streptococcus pneumoniae, PSI, protein S initiative; 2.10A {Streptococcus pneumoniae} SCOP: a.248.1.1
Probab=23.22 E-value=62 Score=19.89 Aligned_cols=18 Identities=11% Similarity=0.294 Sum_probs=16.3
Q ss_pred CCHHHHHHHHHhcCCceE
Q 036289 74 VEANKVLKKAKSTGKRAE 91 (149)
Q Consensus 74 ~~~~~I~~~I~~~G~~a~ 91 (149)
++++++++.|+..||.+.
T Consensus 61 id~d~l~~~L~~~g~~~~ 78 (81)
T 2fi0_A 61 TPMDKIVRTLEANGYEVI 78 (81)
T ss_dssp CCHHHHHHHHHHTTCEEE
T ss_pred CCHHHHHHHHHHcCCEee
Confidence 689999999999999875
No 66
>2w7v_A General secretion pathway protein L; transport, type II secretion, transport protein; 2.30A {Vibrio parahaemolyticus}
Probab=22.46 E-value=1.6e+02 Score=18.89 Aligned_cols=50 Identities=8% Similarity=0.062 Sum_probs=33.2
Q ss_pred HHHHHHhCCCCee--EEEEecCCCEEEEE--e-c-CCHHHHHHHHHhcCCceEEccC
Q 036289 45 KVKNAVSSLSGVK--SVEINRKQQKVSVT--G-Y-VEANKVLKKAKSTGKRAEIWPY 95 (149)
Q Consensus 45 kV~k~L~~~~GV~--~v~vdl~~~~v~V~--g-~-~~~~~I~~~I~~~G~~a~~~~~ 95 (149)
.+..+|...+++. ++++|-..+.+.+. . + -..+.+...+.+ ||.++.-..
T Consensus 16 ~L~~~l~~vp~l~~~sLryD~~R~ELrlq~~A~dF~~~E~lr~~l~~-gf~Ve~Gs~ 71 (95)
T 2w7v_A 16 ALPATLGQVKDLEITSFKYDGQRGEVRIHARSSDFQPFEQARVKLAE-KFNVEQGQL 71 (95)
T ss_dssp GHHHHHHTSTTCEEEEEEEETTTTEEEEEEEESSSHHHHHHHHHHHT-TEEEEECCC
T ss_pred HHHHHhccCCCceEEEEeecCCCCeEEEEEecCCHHHHHHHHHHhhc-CcEEehhhh
Confidence 3455677777754 56666677788775 2 2 346777778865 998887553
No 67
>3cx5_F Cytochrome B-C1 complex subunit 6; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: f.28.1.1 PDB: 3cxh_F* 1ezv_H* 1kb9_F* 1p84_F* 2ibz_H* 1kyo_F*
Probab=22.29 E-value=19 Score=25.48 Aligned_cols=14 Identities=21% Similarity=0.107 Sum_probs=0.0
Q ss_pred cccchhHHHhhhcc
Q 036289 3 VAGTLEYLSDLMGS 16 (149)
Q Consensus 3 ~~~~~~~~s~~~~~ 16 (149)
+||+.++||+|.+.
T Consensus 3 ~mg~~d~~~dl~~s 16 (146)
T 3cx5_F 3 LELVGEYWEQLKIT 16 (146)
T ss_dssp --------------
T ss_pred chhHHHHHHHHHHH
Confidence 69999999999865
No 68
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=22.04 E-value=1.8e+02 Score=20.37 Aligned_cols=87 Identities=11% Similarity=0.098 Sum_probs=51.5
Q ss_pred ccchhHHHhhhccC-CCcc----cccc-CcceEEEEEEcCcChhHHHHHHHHHhCCCCeeEEEEecCCCEE-----EEE-
Q 036289 4 AGTLEYLSDLMGSS-GHKH----KKKK-KQLQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKV-----SVT- 71 (149)
Q Consensus 4 ~~~~~~~s~~~~~~-~~~~----~~~~-~~~~~v~l~Vgm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v-----~V~- 71 (149)
-|+|.-++.+|... -+.. .... .....+++.+. ....-...+.+.|.++.+|..|.--.....+ .|.
T Consensus 14 pGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~-~d~~~leqI~kqL~Kl~dV~~V~r~~~~~~v~rEl~liKv 92 (164)
T 2f1f_A 14 SGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTV-GDEKVLEQIEKQLHKLVDVLRVSELGQGAHVEREIMLVKI 92 (164)
T ss_dssp TTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEE-SCHHHHHHHHHHHHHSTTEEEEEEGGGSCEEEEEEEEEEE
T ss_pred CcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEe-ccHHHHHHHHHHHcCCCCEEEEEEcCCcccceeEEEEEEE
Confidence 37888888888543 2221 1122 34566777775 4577888999999999999988754333322 222
Q ss_pred -ec-CCHHHHHHHHHhcCCceE
Q 036289 72 -GY-VEANKVLKKAKSTGKRAE 91 (149)
Q Consensus 72 -g~-~~~~~I~~~I~~~G~~a~ 91 (149)
.. ....+|.+.++-..-++.
T Consensus 93 ~~~~~~r~~i~~~~~~fra~iv 114 (164)
T 2f1f_A 93 QASGYGRDEVKRNTEIFRGQII 114 (164)
T ss_dssp ECCTHHHHHHHHHHHHTTCEEE
T ss_pred ECCcccHHHHHHHHHHcCCEEE
Confidence 22 233556666655444433
No 69
>3pro_C Alpha-lytic protease; Pro region, foldase, protein folding, serine protease, hydro hydrolase inhibitor complex; HET: AES; 1.80A {Lysobacter enzymogenes} SCOP: d.52.1.1 d.52.1.1 PDB: 2pro_A* 4pro_C
Probab=20.04 E-value=1.8e+02 Score=20.59 Aligned_cols=35 Identities=17% Similarity=0.158 Sum_probs=25.2
Q ss_pred CCeeEEEEecCCCEEEEEec-CCHHHHHHHHHhcCC
Q 036289 54 SGVKSVEINRKQQKVSVTGY-VEANKVLKKAKSTGK 88 (149)
Q Consensus 54 ~GV~~v~vdl~~~~v~V~g~-~~~~~I~~~I~~~G~ 88 (149)
.||..+-||..+++|.|+.. .........+..+|.
T Consensus 114 ~~v~~W~VD~~tN~VVV~a~~~~~~aa~~f~~~AG~ 149 (166)
T 3pro_C 114 DGVQSWYVDPRSNAVVVKVDDGATDAGVDFVALSGA 149 (166)
T ss_dssp TTEEEEEEEGGGTEEEEEEETTCHHHHHHHHHHHTC
T ss_pred CCCceEEEeCCCCeEEEEeCCCChHHHHHHHHHhCC
Confidence 56889999999999999853 344445555566663
Done!